Metagenome / Metatranscriptome Family F059388

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059388
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	71 residues
Representative Sequence	MLQITVTICANHKKVMEEARRLEREGIAKIDEHIPTLILNVPDHRNEEMVIAALARLMRKGFVTDFKSNK
Number of Associated Samples	91
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	64.18 %
% of genes near scaffold ends (potentially truncated)	35.82 %
% of genes from short scaffolds (< 2000 bps)	97.76 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (52.239 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (36.567 % of family members)
Environment Ontology (ENVO)	Unclassified (64.179 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.448 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.59% β-sheet: 25.51% Coil/Unstructured: 44.90%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
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SCOP family	SCOP domain	Representative PDB	TM-score
d.58.32.1: Vanillyl-alcohol oxidase-like	d1wvfa1	1wvf	0.76231
d.58.26.0: automated matches	d6xr5a2	6xr5	0.74529
d.58.26.0: automated matches	d2hkea2	2hke	0.73508
d.58.19.1: Bacterial exopeptidase dimerisation domain	d1z2la2	1z2l	0.72909
d.58.4.11: PA3566-like	d2pd1a1	2pd1	0.72804

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF00589	Phage_integrase	9.70
PF00313	CSD	1.49
PF00239	Resolvase	1.49
PF00662	Proton_antipo_N	0.75
PF00118	Cpn60_TCP1	0.75
PF00582	Usp	0.75
PF01144	CoA_trans	0.75
PF04392	ABC_sub_bind	0.75
PF11752	DUF3309	0.75
PF13442	Cytochrome_CBB3	0.75
PF00198	2-oxoacid_dh	0.75
PF08298	AAA_PrkA	0.75
PF03458	Gly_transporter	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG1009	Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit	Energy production and conversion [C]	1.49
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.49
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	1.49
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.75
COG0508	Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component	Energy production and conversion [C]	0.75
COG1788	Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit	Lipid transport and metabolism [I]	0.75
COG2057	Acyl-CoA:acetate/3-ketoacid CoA transferase, beta subunit	Lipid transport and metabolism [I]	0.75
COG2766	Predicted Ser/Thr protein kinase	Signal transduction mechanisms [T]	0.75
COG2860	Uncharacterized membrane protein YeiH	Function unknown [S]	0.75
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.75
COG4670	Acyl CoA:acetate/3-ketoacid CoA transferase	Lipid transport and metabolism [I]	0.75

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.24 %
All Organisms	root	All Organisms	47.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.24 %
cellular organisms	root	All Organisms → cellular organisms	47.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.24 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	47.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	45.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.24 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	41.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.24 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	40.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.24 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	37.31 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.24 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	30.60 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	1.49 %
Sinorhizobium/Ensifer group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.24 %
Afipia broomeae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia broomeae	1.49 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.75 %
Sinorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.24 %
Afipia broomeae ATCC 49717	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia broomeae → Afipia broomeae ATCC 49717	1.49 %
unclassified Sinorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → unclassified Sinorhizobium	0.75 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.24 %
Afipia broomeae ATCC 49717	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia broomeae → Afipia broomeae ATCC 49717	1.49 %
Sinorhizobium sp. M4_45	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → unclassified Sinorhizobium → Sinorhizobium sp. M4_45	0.75 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005533\|Ga0070734_10080352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1928	Open in IMG/M
3300005764\|Ga0066903_101557774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → unclassified Sinorhizobium → Sinorhizobium sp. M4_45	1251	Open in IMG/M
3300005764\|Ga0066903_106034998	Not Available	634	Open in IMG/M
3300006050\|Ga0075028_100197440	Not Available	1085	Open in IMG/M
3300006059\|Ga0075017_101058854	Not Available	633	Open in IMG/M
3300006102\|Ga0075015_100345057	Not Available	829	Open in IMG/M
3300006163\|Ga0070715_10659225	Not Available	620	Open in IMG/M
3300006174\|Ga0075014_100724507	Not Available	581	Open in IMG/M
3300006354\|Ga0075021_10254794	Not Available	1081	Open in IMG/M
3300006755\|Ga0079222_10224220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1155	Open in IMG/M
3300009551\|Ga0105238_10486710	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300009633\|Ga0116129_1038140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1549	Open in IMG/M
3300011120\|Ga0150983_11451586	Not Available	504	Open in IMG/M
3300013105\|Ga0157369_10211682	All Organisms → cellular organisms → Bacteria → Proteobacteria	2031	Open in IMG/M
3300016270\|Ga0182036_10306223	Not Available	1210	Open in IMG/M
3300016270\|Ga0182036_10805678	Not Available	765	Open in IMG/M
3300016270\|Ga0182036_11318298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	603	Open in IMG/M
3300016294\|Ga0182041_10217444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1533	Open in IMG/M
3300016319\|Ga0182033_10386305	Not Available	1180	Open in IMG/M
3300016319\|Ga0182033_10601585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	955	Open in IMG/M
3300016341\|Ga0182035_10137709	Not Available	1854	Open in IMG/M
3300016341\|Ga0182035_10437304	Not Available	1106	Open in IMG/M
3300016341\|Ga0182035_11289969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia broomeae → Afipia broomeae ATCC 49717	654	Open in IMG/M
3300016341\|Ga0182035_11516396	Not Available	603	Open in IMG/M
3300016341\|Ga0182035_11566697	Not Available	594	Open in IMG/M
3300016341\|Ga0182035_11687168	Not Available	572	Open in IMG/M
3300016357\|Ga0182032_10452179	Not Available	1048	Open in IMG/M
3300016357\|Ga0182032_10723294	Not Available	837	Open in IMG/M
3300016357\|Ga0182032_10859815	Not Available	769	Open in IMG/M
3300016357\|Ga0182032_11600580	Not Available	567	Open in IMG/M
3300016371\|Ga0182034_10541269	Not Available	976	Open in IMG/M
3300016387\|Ga0182040_10608144	Not Available	886	Open in IMG/M
3300016404\|Ga0182037_10343653	Not Available	1213	Open in IMG/M
3300016404\|Ga0182037_10794140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	816	Open in IMG/M
3300016422\|Ga0182039_10165608	All Organisms → cellular organisms → Bacteria → Proteobacteria	1729	Open in IMG/M
3300016422\|Ga0182039_10930982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	777	Open in IMG/M
3300016422\|Ga0182039_11097163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	716	Open in IMG/M
3300016445\|Ga0182038_10272423	Not Available	1372	Open in IMG/M
3300017975\|Ga0187782_10467925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	962	Open in IMG/M
3300020069\|Ga0197907_10146541	Not Available	932	Open in IMG/M
3300020080\|Ga0206350_11184646	Not Available	599	Open in IMG/M
3300020080\|Ga0206350_11322133	Not Available	633	Open in IMG/M
3300020582\|Ga0210395_10424412	Not Available	1000	Open in IMG/M
3300021181\|Ga0210388_10912437	Not Available	757	Open in IMG/M
3300021433\|Ga0210391_11537502	Not Available	510	Open in IMG/M
3300021560\|Ga0126371_12661239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	606	Open in IMG/M
3300021560\|Ga0126371_13585650	Not Available	524	Open in IMG/M
3300025463\|Ga0208193_1009883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2995	Open in IMG/M
3300025924\|Ga0207694_10526085	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300026116\|Ga0207674_10386672	Not Available	1353	Open in IMG/M
3300026823\|Ga0207759_105860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1024	Open in IMG/M
3300026824\|Ga0207723_108083	All Organisms → cellular organisms → Bacteria → Proteobacteria	848	Open in IMG/M
3300026847\|Ga0207802_1005399	Not Available	1183	Open in IMG/M
3300026860\|Ga0207823_105996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	924	Open in IMG/M
3300026862\|Ga0207724_1018085	Not Available	616	Open in IMG/M
3300026865\|Ga0207746_1010993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	792	Open in IMG/M
3300026865\|Ga0207746_1012843	Not Available	722	Open in IMG/M
3300026869\|Ga0207821_1007947	All Organisms → cellular organisms → Bacteria → Proteobacteria	1128	Open in IMG/M
3300026889\|Ga0207745_1025740	Not Available	517	Open in IMG/M
3300026890\|Ga0207781_1003703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1795	Open in IMG/M
3300026928\|Ga0207779_1034527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia broomeae → Afipia broomeae ATCC 49717	593	Open in IMG/M
3300026990\|Ga0207824_1013598	Not Available	878	Open in IMG/M
3300027010\|Ga0207839_1006192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1474	Open in IMG/M
3300027011\|Ga0207740_1039467	Not Available	556	Open in IMG/M
3300027039\|Ga0207855_1029510	Not Available	742	Open in IMG/M
3300027045\|Ga0207726_1038863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	658	Open in IMG/M
3300027063\|Ga0207762_1065959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	523	Open in IMG/M
3300027313\|Ga0207780_1043912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	773	Open in IMG/M
3300027313\|Ga0207780_1044884	Not Available	763	Open in IMG/M
3300027703\|Ga0207862_1005180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3822	Open in IMG/M
3300027826\|Ga0209060_10052904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1953	Open in IMG/M
3300027894\|Ga0209068_10190219	Not Available	1125	Open in IMG/M
3300031544\|Ga0318534_10507155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	689	Open in IMG/M
3300031544\|Ga0318534_10554345	Not Available	655	Open in IMG/M
3300031545\|Ga0318541_10479450	Not Available	696	Open in IMG/M
3300031546\|Ga0318538_10493110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	664	Open in IMG/M
3300031561\|Ga0318528_10761204	Not Available	518	Open in IMG/M
3300031572\|Ga0318515_10431458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	705	Open in IMG/M
3300031573\|Ga0310915_10494389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	869	Open in IMG/M
3300031573\|Ga0310915_10762083	Not Available	682	Open in IMG/M
3300031573\|Ga0310915_11128489	Not Available	544	Open in IMG/M
3300031679\|Ga0318561_10820238	Not Available	511	Open in IMG/M
3300031719\|Ga0306917_11097513	Not Available	620	Open in IMG/M
3300031719\|Ga0306917_11105845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	617	Open in IMG/M
3300031736\|Ga0318501_10734367	Not Available	545	Open in IMG/M
3300031744\|Ga0306918_10225760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1421	Open in IMG/M
3300031744\|Ga0306918_10846485	Not Available	713	Open in IMG/M
3300031764\|Ga0318535_10405136	Not Available	609	Open in IMG/M
3300031769\|Ga0318526_10163408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	907	Open in IMG/M
3300031771\|Ga0318546_10360813	Not Available	1012	Open in IMG/M
3300031795\|Ga0318557_10356857	Not Available	672	Open in IMG/M
3300031797\|Ga0318550_10548055	Not Available	557	Open in IMG/M
3300031831\|Ga0318564_10409848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	593	Open in IMG/M
3300031833\|Ga0310917_10298781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1089	Open in IMG/M
3300031833\|Ga0310917_10470847	Not Available	855	Open in IMG/M
3300031833\|Ga0310917_10721806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	674	Open in IMG/M
3300031879\|Ga0306919_10136061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1777	Open in IMG/M
3300031879\|Ga0306919_10181993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1552	Open in IMG/M
3300031879\|Ga0306919_10465028	Not Available	974	Open in IMG/M
3300031890\|Ga0306925_10454192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1369	Open in IMG/M
3300031890\|Ga0306925_10919505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	898	Open in IMG/M
3300031890\|Ga0306925_11442367	Not Available	677	Open in IMG/M
3300031890\|Ga0306925_11513483	Not Available	656	Open in IMG/M
3300031890\|Ga0306925_11545590	Not Available	648	Open in IMG/M
3300031910\|Ga0306923_10834309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1015	Open in IMG/M
3300031910\|Ga0306923_11856680	Not Available	617	Open in IMG/M
3300031910\|Ga0306923_12229860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	548	Open in IMG/M
3300031912\|Ga0306921_10691992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1172	Open in IMG/M
3300031912\|Ga0306921_11914051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	634	Open in IMG/M
3300031912\|Ga0306921_12551166	Not Available	529	Open in IMG/M
3300031941\|Ga0310912_10288457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1269	Open in IMG/M
3300031946\|Ga0310910_10146034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1805	Open in IMG/M
3300031946\|Ga0310910_11086343	Not Available	623	Open in IMG/M
3300031947\|Ga0310909_10338778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1262	Open in IMG/M
3300031947\|Ga0310909_11232124	Not Available	604	Open in IMG/M
3300031954\|Ga0306926_10819608	Not Available	1120	Open in IMG/M
3300031954\|Ga0306926_11411596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	807	Open in IMG/M
3300031959\|Ga0318530_10384650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	582	Open in IMG/M
3300032001\|Ga0306922_10245770	Not Available	1923	Open in IMG/M
3300032001\|Ga0306922_10787104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	995	Open in IMG/M
3300032044\|Ga0318558_10555314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	574	Open in IMG/M
3300032051\|Ga0318532_10332844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	539	Open in IMG/M
3300032054\|Ga0318570_10565728	Not Available	519	Open in IMG/M
3300032059\|Ga0318533_10241950	All Organisms → cellular organisms → Bacteria → Proteobacteria	1301	Open in IMG/M
3300032059\|Ga0318533_10844009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	672	Open in IMG/M
3300032060\|Ga0318505_10361633	Not Available	686	Open in IMG/M
3300032063\|Ga0318504_10581339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	538	Open in IMG/M
3300032064\|Ga0318510_10125575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	997	Open in IMG/M
3300032065\|Ga0318513_10666869	Not Available	510	Open in IMG/M
3300032067\|Ga0318524_10540207	Not Available	613	Open in IMG/M
3300032261\|Ga0306920_101757961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	876	Open in IMG/M
3300032261\|Ga0306920_102941460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	645	Open in IMG/M
3300032261\|Ga0306920_104032973	Not Available	532	Open in IMG/M
3300033289\|Ga0310914_10684365	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.01%
Host-Associated	Host-Associated	2.99%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.04%
Aquatic	Environmental → Aquatic	5.97%
Plants	Host-Associated → Plants	2.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.04%
Sediment	Environmental → Aquatic → Sediment	4.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.24%
Freshwater	Environmental → Aquatic → Freshwater	1.49%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.39%
Loam	Environmental → Terrestrial → Soil → Loam	17.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.24%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.49%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.75%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.75%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	66.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.16%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	5.22%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.24%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.49%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.75%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	16.42%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.24%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.49%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.49%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.49%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.49%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.75%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025463	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026823	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 19 (SPAdes)	Environmental	Open in IMG/M
3300026824	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 27 (SPAdes)	Environmental	Open in IMG/M
3300026847	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 20 (SPAdes)	Environmental	Open in IMG/M
3300026860	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 70 (SPAdes)	Environmental	Open in IMG/M
3300026862	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 31 (SPAdes)	Environmental	Open in IMG/M
3300026865	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 75 (SPAdes)	Environmental	Open in IMG/M
3300026869	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 53 (SPAdes)	Environmental	Open in IMG/M
3300026889	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 57 (SPAdes)	Environmental	Open in IMG/M
3300026890	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 51 (SPAdes)	Environmental	Open in IMG/M
3300026928	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 44 (SPAdes)	Environmental	Open in IMG/M
3300026990	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 73 (SPAdes)	Environmental	Open in IMG/M
3300027010	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 64 (SPAdes)	Environmental	Open in IMG/M
3300027011	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 29 (SPAdes)	Environmental	Open in IMG/M
3300027039	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 14 (SPAdes)	Environmental	Open in IMG/M
3300027045	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 40 (SPAdes)	Environmental	Open in IMG/M
3300027063	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 37 (SPAdes)	Environmental	Open in IMG/M
3300027313	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 45 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070734_100803524	3300005533	Surface Soil	VLQITVTVSANKNRVMEEAQKLELEGIAQIHEQPLTLTLNDPEQRNEAMVIEILARLARKGFVTEFKSKWIK*
Ga0066903_1015577744	3300005764	Tropical Forest Soil	VRMLQITVTVCAKEKKVMEEARRLELEGVVIHEQTPTLTLNVPDRRNEEMVIATLARLARKGFVTEFKSKRIK*
Ga0066903_1060349982	3300005764	Tropical Forest Soil	MLQISVTICANHEKVMEEARRLEREGIAKIHEHIPTLTLNVPDHRNEEMVIAALARLTRNGFVTDFKSERVNK*
Ga0075028_1001974402	3300006050	Watersheds	VLQITVTLAADQEKVIEEARKLEREGIAKIHEHVPTLILNVSDHRNDEKVITTLAKLARKGLVTEFRSNWVK*
Ga0075017_1010588541	3300006059	Watersheds	AADQEKVIEEARRLEREGIAKIHEHVPTLILNVPDHRNDEKVIATLAKLARKGLVTEFRSTWVK*
Ga0075015_1003450572	3300006102	Watersheds	MLQITVTLAADQEKVIEEARKLEREGIAKIHEHVPTLILNVSDHRNDEKVITTLAKLARKGLVTEFRSNWVK*
Ga0070715_106592251	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	ERVMQEARRLEHEGVLKIQEHIPTLTLTVPDQRNDEKVIAALAMLARKGFVTEFKSRWIK
Ga0075014_1007245072	3300006174	Watersheds	MLQITVTFAADQEKVIEEARRLEREGIAKIHEHVPTLILNVPDHRNDEKVITTLAKLARKGLVTEFRSSWVK*
Ga0075021_102547943	3300006354	Watersheds	MLQITVTLAADQEKVIEEARKLEREGIVKIHEHVPTLILNVPDHRNDEKVITTLAKLARKGLVTEFRSSWVK*
Ga0079222_102242202	3300006755	Agricultural Soil	MLEIKVTLSANQERLMHEARRLEHEGVLTIQEHIPTLTLTVPDHRNDEKVIAALAMLARKGFVTEFKSRWIK*
Ga0105238_104867103	3300009551	Corn Rhizosphere	MLEIKVTLSANQERVMQEARRLEHEGILKIQEHIPTLTLTVPDHRNDEKVIAALAMLARKGFVTEFKSRWIK*
Ga0116129_10381402	3300009633	Peatland	MLQITVTLTANQEKVMEEARRFEREGIAKIHEHVPTLILNVPDHRNEEKVIVALAKLAREGLVADFKSSWVK*
Ga0150983_114515862	3300011120	Forest Soil	VRMLQITVTMTANQEKVMEEARRFEREGIAKIHEHVPTLILNVPDHRNEEKVIVGLAKLAREGLVSDFKSSWVK*
Ga0157369_102116821	3300013105	Corn Rhizosphere	TLSANQERLMHEARRLEHEGVLTIQEHIPTLTLTVPDHRNDEKVIAALAMLARKGFVTEFKSRWIK*
Ga0182036_103062231	3300016270	Soil	ITVTVSANHEKVMEEAQRLELEGIAKIHEHTPTLILNAPDQRNDEKVIAALAKLARKGLVTEFRSRWIK
Ga0182036_108056781	3300016270	Soil	MLQITVAICANHEKVMGEARRLEREGIAKIDEHIPTLILNVPDHRNEEMVIAALARLTRKGFVTDFKSERVNK
Ga0182036_113182981	3300016270	Soil	QISVTICANHQKVMEESRRLEREGIAKIDEHIPTLILNVPDHRNEGLVIAALAKLTRNGFVTDFKSERVNK
Ga0182041_102174444	3300016294	Soil	MLHITVTICANHKKVMEEARRLEREGIAKIDEHIPTLILNVPDHRNEEMVIAALARLMRKGFVTDFKSERVNK
Ga0182033_103863051	3300016319	Soil	ITITIAANQEKVMEETRRLEREGIAKIHEHIPTLILKVPYHRNEETVIAALARLARNGFVADFKSEWVNK
Ga0182033_106015853	3300016319	Soil	MTFEVSAEMEVRMLQISVTICANHQKVMEEARRLEREGIAKIDEHIPTLILNVPDHRNEEMVIAALARLTRNGFVTDFKSERVN
Ga0182035_101377091	3300016341	Soil	MLHITVTICANHKKVMEEARRLEREGIAKIDEHIPTLILNVPDHRNEGLVIAALAKLTRNGFVTDFKSE
Ga0182035_104373043	3300016341	Soil	EARRLELEGVVIHEQTPTLTLNVPDRRNEETVIATLARLARRGFVTEFKSKWIK
Ga0182035_112899692	3300016341	Soil	MLQITVTICANHKKVMEEARRLEREGIAKIDEHIPTLILNVPDHRNEEMVIAALARLMRKGFVTDFKSNK
Ga0182035_115163962	3300016341	Soil	MEGRMLQISVTICANHQKVMEESRRLEREGIAKIDEHIPTLILNVPDHRNEGLVIAALAKLTRNGFVTDFKSERVNK
Ga0182035_115666971	3300016341	Soil	SGVRMLQITVTVSANHEKVMEEAQILELEGIAKIHEHTSTLILNVPDQRNDEKVIAALAKLARKGLVTEFRSRWIK
Ga0182035_116871681	3300016341	Soil	VCANEKKVMEEARKLELEGIVKLHEQTPTLTVNVPDPRNDAMVIETLARLARKGFVTEFKSKRIE
Ga0182032_104521791	3300016357	Soil	MLQITVTVCANEKKVMEEARRLELEGVVIHEQTPTLTLHVPDRRNEETVIATLARLARRGFVTEFKSKWIK
Ga0182032_107232942	3300016357	Soil	MLQITVTICANHKKVMEEARRLEHEGIAKIDEHIPTLILDVPDHRNEEMVIAALARLTRKGFVTDFKSERVNK
Ga0182032_108598152	3300016357	Soil	MLQISVTICANHQKVMEESRRLEREGIAKIDEHIPTLILNVPDHRNEGLVIAALAKLTRNGFVTDFKSE
Ga0182032_116005801	3300016357	Soil	MTFEVSAEMEVRMLQITGTICVNHEKVMEEARRLEHEGIAKIDKHIPTLILNVPDHRNEEMVIAALARLTRNGFVTDFKSERVNK
Ga0182034_105412692	3300016371	Soil	MLQSTVTICANHQKVMEEARRLEHEGIAKSDEHIPTLILDVPDHRNEEMVIAALARLMRKGFVTDFKSNK
Ga0182040_106081441	3300016387	Soil	KVMEEAQRLELEGIAKIHEQTPTLILNAPDQRNDEKVIAALAKLARKGLVTEFRSRWIK
Ga0182037_103436531	3300016404	Soil	MLHITVTICANHKKVMEEARRLEREGIAKIDEHIPTLILNVPDHRNEEMVIAALARLTRKGFVTDFKSERVNK
Ga0182037_107941402	3300016404	Soil	LQITVTVCANEKKVKEEARRLELEGVVIHEQTPTLTLNVPDRRNEETVIATLARLARRGFVTEFKSKWIK
Ga0182039_101656086	3300016422	Soil	MLHITVTICANHKKVMEEARRLEREGIAKIDEHIPTLILNVPDHRNEEMVIAALARL
Ga0182039_109309822	3300016422	Soil	MLQITVTVCANEKKVMEEARRLELEGVVIHEQTPTLTLNVPDRRNEETVIATLARLARRGFVTEFKSK
Ga0182039_110971631	3300016422	Soil	MLQITVTICANHEKVMGEARRLEREGIAKIDEHIPTLILNVPDHRNEEMVIAALARL
Ga0182038_102724231	3300016445	Soil	MLQITVTICANHEKVMGEARRLEREGIAKIDEHIPTLSLNVPDHRNEEMVIAARARLMRKGFVTDFRSNK
Ga0187782_104679252	3300017975	Tropical Peatland	MLQITITMSANHDKVTEEVRRLEREGIAQVHEHTPTLILNVLDHRNDEMVIAALARLSRKGFVTEFKSKWVK
Ga0197907_101465411	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MLEIAVTLSADQERVIQEARRLEHEGVLKIQEHIPTLTLTVPDRQNDEKVIAALAMLARKGLVTEFRSRWIK
Ga0206350_111846461	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	MLEIAVTLSADQERVIQEARRLEHEGVLKIQEHIPTPTLTVPDRQNDEKVIAALAMLVRKGLVTEFRSRWIK
Ga0206350_113221331	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	MLEIKVTLSANQERLMHEARRLEHEGVLTIQEHIPTLTLTVPDHRNDEKVIAALAMLARKGFVTEFKSRWIK
Ga0210395_104244122	3300020582	Soil	MLQITVTVSAEQEKVIEEARRLEREGIAKIHEHTPTLILNVPDHRNEEKVIVELAKLARKGLVTDFRSSWVK
Ga0210388_109124373	3300021181	Soil	MLQITVTLTANQEKVMEEARRLEREGIAKIHEHVPTLILNVPDHRNEEKVIAALAKLARKGLVADFRSRLGQVALRPQRWFAR
Ga0210391_115375022	3300021433	Soil	EQEKVIEEARRLEREGIAKIHEHTPTLILNVPDHRNEEKVIVELAKLARKGLVTDFRSSWVK
Ga0126371_126612391	3300021560	Tropical Forest Soil	MLQITVTVSANHEKVMEEAQRLELEGIAKIHEHTPTLILNAPDQRNDEKVIAALAKLARKGLVTEFRSRWIK
Ga0126371_135856501	3300021560	Tropical Forest Soil	MLQITVTICANHEKVMEEARRLEREGIAKIDEHMPTLILNVPDHRNEEMVIAALARLMRKGFVTDFKSNK
Ga0208193_10098833	3300025463	Peatland	MLQITVTLTANQEKVMEEARRFEREGIAKIHEHVPTLILNVPDHRNEEKVIVALAKLAREGLVADFKSSWVK
Ga0207694_105260852	3300025924	Corn Rhizosphere	MLEIKVTLSANQERVMQEARRLEHEGILKIQEHIPTLTLTVPDHRNDEKVIAALAMLARKGFVTEFKSRWIK
Ga0207674_103866721	3300026116	Corn Rhizosphere	MSEIKVTLSANQERVMQEARRLEHEGILKIQEHIPTLTLTVPDYRNDEKVIAALAMLARKGFVTEFKSRWIK
Ga0207759_1058601	3300026823	Tropical Forest Soil	MLQITVTVCANEKKVMEEARRLELEGIVKIHEQIPTLTVNVPDRRNEEMVIATLAKLARNGFVTEFKSKWIK
Ga0207723_1080832	3300026824	Tropical Forest Soil	MLQITVKLCANEKKVMEEARRLELEGIVKIHEQIPTLTVNVPDRRNEEMVIAALAKLARNGFVTEFKSKWIK
Ga0207802_10053993	3300026847	Tropical Forest Soil	MLQISVTICANHQKVMEEARRLEREGIAKIDEHIPTLILNVPDHRNEEMVIAALARLMRKGFVTDFRSNK
Ga0207823_1059961	3300026860	Tropical Forest Soil	MLQITVTVCANEKKVMEEARRLELEGIVKIHEQIPTLTVNVPDRRNEEMVFATLAKLARNGFVTEFKSKWIK
Ga0207724_10180852	3300026862	Tropical Forest Soil	MLQISVTICANHQKVMEEARRLEREGIAKIDEHIPTLILNVPDHRNEEMVIAALARLMRKGFVTDFKSNK
Ga0207746_10109932	3300026865	Tropical Forest Soil	MLQITITVSANQEKVMEEARRLELEGIVKIHEQIPTLTVNVPDRRNEEMVIAALAKLARNGFVTEFKSKWIK
Ga0207746_10128432	3300026865	Tropical Forest Soil	GGRRQTYPQYLGEMTFEVSAEMEVRMLQITVTICANHEKVMEEARRLEREGIAKIDEHIPTLILDVPDHRNEEMVIAALARLMRKGFVTDFKSNK
Ga0207821_10079472	3300026869	Tropical Forest Soil	MLQISVTICANHEKVMGEARRLEREGIAKIDEHIPTLILNVPDHRNEEMVIAALARLMRKGFVTDFRSNK
Ga0207745_10257401	3300026889	Tropical Forest Soil	MLQITVKLCANEKKVMEEARRLELEGIVKIHEQIPTLTVNVPDRRNEEMVFATLAKLARNGFVTEFNSKWIK
Ga0207781_10037032	3300026890	Tropical Forest Soil	MLQISVTICANHQKVMEEARRLEREGIAKIDEHIPTLILNVPDHRNEEMVIAALARLTRKGFVTDFKSERVNK
Ga0207779_10345271	3300026928	Tropical Forest Soil	MLQITVTICANHKKVMEEARRLEHEGIAKIDEHIPTLILDVPDHRNEEMVIAALARLTRKGFVTDF
Ga0207824_10135982	3300026990	Tropical Forest Soil	MLQITVTVCANFDDVTGEARRLERERFVKIHELTPNLILDVPRHVNEEIVIATLAGLARKGWVTEFRSRWVK
Ga0207839_10061922	3300027010	Tropical Forest Soil	MLQITVKLCANEKKVMEEARRLELEGIVKIHEQIPTLTVNVPDRRNEEMVFATLAKLARNGFVTEFKSKWIK
Ga0207740_10394672	3300027011	Tropical Forest Soil	QTHEPRAEMEVRMLQISVTICANHKKVMEEARRLEHEGIAKIDEHIPTLILDVPDHRNEEMVIAALARLMRKGFVTDFRSNK
Ga0207855_10295103	3300027039	Tropical Forest Soil	MLQITVTICANHEKVMEEARRLEREGIAKIDEHIPTLILNVPDHRNEEMVIAALARLMRKGFVTDFRSNK
Ga0207726_10388631	3300027045	Tropical Forest Soil	MLQITVTICANHEKVMGEARRLEREGIAKIDEHIPTLTLNVPDHRNEEMVIAALARLMRKGFVTDFKSNK
Ga0207762_10659592	3300027063	Tropical Forest Soil	MIFEVSAEMEVRMLQISVTICANHQKVMEEARRLEREGIAKIDEHIPTLILNVPDHRNEEMVIAALARLTRKGFVTDFKSNK
Ga0207780_10439122	3300027313	Tropical Forest Soil	MLQITVTVCANEKKVMEEARRLELEGIVKIHEQIPTLTVNVPDRRNEEMVIAALAKLARNGFVTEFKSKWIK
Ga0207780_10448842	3300027313	Tropical Forest Soil	MLQISVTICANHQKVMEEARRLEREGIAKIDEHIPTLILDVPDHRNEEMVIAALARLMRKGFVTDFKSNK
Ga0207862_10051802	3300027703	Tropical Forest Soil	MLQITVTICANHEKVMEEARRLEREGIAKIDEHIPTLTLNVPDHRNEEMVIAALARLMRKGFVTDFKSNK
Ga0209060_100529044	3300027826	Surface Soil	VLQITVTVSANKNRVMEEAQKLELEGIAQIHEQPLTLTLNDPEQRNEAMVIEILARLARKGFVTEFKSKWIK
Ga0209068_101902193	3300027894	Watersheds	MLQITVTLAADQEKVIEEARKLEREGIVKIHEHVPTLILNVPDHRNDEKVITTLAKLARKGLVTEFRSSWVK
Ga0318534_105071552	3300031544	Soil	MTFEVSAEMEVRMLQISVTICANHQKVMEEARRLEREGIAKIDEHIPTLILNVPDHRNEEMVIAALARLTRNGFVTDFKSERVNK
Ga0318534_105543451	3300031544	Soil	MLQITITVSANQEKVMEEARRLELEGIAKIHEHTPTLTLNVPDQRNDKMVIAALARLARKGFVTEFKSKWIK
Ga0318541_104794501	3300031545	Soil	TVTICANHKKVMEEARRLEHEGIAKIDEHIPTLILDVPDHRNEEMVIAALARLMRKGFVTDFKSNK
Ga0318538_104931101	3300031546	Soil	MLQITVTVCANEKKVMEEARRLELEGVVIHEQTPTLTLNVPDRRNEETVIATLARLARRGFVTEFKSKLIK
Ga0318528_107612041	3300031561	Soil	KKVMEEARRLELEGVVIHEETPTLTLNVPDRRNEEMVIATLARLARKGFVTEFKSKWIK
Ga0318515_104314582	3300031572	Soil	MLQITVTICANHEKVMGEARRLEREGIAKIDEHIPTLILNVPDHRNEEMVIAALARLMRKGFVTDFRSNK
Ga0310915_104943892	3300031573	Soil	MLQITVTVCANEKKVMEEARRLELEGVVIHEQTPTLTLNVPDRRNEETVIATLARLARRGFVTEFKSKWIK
Ga0310915_107620832	3300031573	Soil	MLQITVTVSANHEKVMEEAQIPELEGIAKIHEHTSTLILNVPDQRNDEKVIAALAKLARQGLVTEFIRQG
Ga0310915_111284891	3300031573	Soil	MLQITVTVCANEKKVMEEARRLELEGVVIHEETPTLTLNVPDRRNEEMVIATLARLARKGFVTEFKSKWVK
Ga0318561_108202381	3300031679	Soil	MLQITVTICANHQKVMEEARRLEREGIAKIDEHIPTLILNVPDHRNEEMVIAALARLMRKGFVTDFKSNK
Ga0306917_110975131	3300031719	Soil	DFRGQALKWRVRMLQITVTICANHEKVMGEARRLEREGIAKIDEHIPTLILNVPDHRNEEMVIAALARLMRKGFVTDFRSNK
Ga0306917_111058452	3300031719	Soil	MLQITVTVCANEKKVKEEARRLELEGVVIHEQTPTLTLNVPDRRNEETVIATLARLARRGFVTEFKSKLIK
Ga0318501_107343671	3300031736	Soil	VRMLQITVTVCANEKKVMEEARRLELEGVVIHEETPTLTLNVPDRRNEEMVIATLARLARKGFVTEFKSKWVK
Ga0306918_102257601	3300031744	Soil	MLQITVTVCANEKKVKEEARRLELEGVVIHEQTPTLTLNVPDRRNEETVIATLARLARRGFVTEFKSKWIK
Ga0306918_108464852	3300031744	Soil	MLQITITMSANQEKVMEEARRLELEGIAKIHEHTPTLTLNVPDQRNDEMVIAALARLARKGFVTEFKSKWIK
Ga0318535_104051361	3300031764	Soil	AEMEVRMLQISVTICANHQKVMEEARRLEREGIAKIDEHIPTLILNVPDHRNEEMVIAALARLMRKGFVTDFKSNK
Ga0318526_101634083	3300031769	Soil	LQITVTVCANEKKVMEEARRLELEGVVIHEQTPTLTLNVPDRRNEETVIATLARLARRGFVTEFKSKLIK
Ga0318546_103608131	3300031771	Soil	MLQITVTVSANHEKVMEEAQILELEGIAKIHEHTSTLILNVPDQQNDEKVIAALAKLARQGLVTEFIRQG
Ga0318557_103568572	3300031795	Soil	EVSAEMEVRMLQITVTICANHKKVMEEARRLEREGIAKIDEHIPTLILNVPDHRNEEMVIAALARLMRKGFVTDFRSNK
Ga0318550_105480551	3300031797	Soil	VMEEARRLELEGVVIHEQTPTLTLNVPDRRNEEMVIATLARLARKGFVTEFKSKWIK
Ga0318564_104098482	3300031831	Soil	MLQITVTICANHEKVMGEARRLEREGIAKIDEHIPTLILNVPDHRNEEMVIAALARLMRKGFVTDFKSNK
Ga0310917_102987813	3300031833	Soil	QTHEPRAEMEVRMLQISVTICANHQKVMEESRRLEREGIAKIDEHIPTLILNVPDHRNEGLVIAALAKLTRNGFVTDFKSERVNK
Ga0310917_104708471	3300031833	Soil	MLQITVTICANHQKVMEEARRLEREGIAKIDEHIPTLILNVPDHRNEEMVIAALARLMRKGFVTDFRSNK
Ga0310917_107218061	3300031833	Soil	MLQITVTICANHKKVMEEARRLEHEGIAKIDEHIPTLILDVPDHRNGEMVIAALARLMRKGF
Ga0306919_101360615	3300031879	Soil	TVTVSANHEKVMEEARRLELEGIAKIHEHTSTLILNVPDQQNDEKVIAALAKLARQGLVTEFIRQG
Ga0306919_101819931	3300031879	Soil	MLQITVTVCANEKKVMEEARRLELEGVVIHEQTPTLTLNVPDRRNEEMVIATLARLARKGFVTEFKSKWIK
Ga0306919_104650281	3300031879	Soil	MLQITITVSANQEKVMEEARRLELEGIAKIHEHTPTLTLNVPDQRNDEMVIAALARLARKGFVTEFKSKWIK
Ga0306925_104541921	3300031890	Soil	MTFEVSAEMEVRMLQISVTICANHQKVMEEARRLEREGIAKIDEHIPTLNLEVPDHRNEEMVIAALARLMRKGFVTDFKSNK
Ga0306925_109195053	3300031890	Soil	MLQITVTICANHKKVMEEARRLEHEGIAKIDEHIPTLILDVPDHRNEEMVIAALARLTRNGFVTDFKSERVNK
Ga0306925_114423671	3300031890	Soil	MLQITGTICANHEKVMEEARRLEHEGIAKIDKHIPTLILNVPDHRNEEMVIAALARLTRNGFVTDFKSERVNK
Ga0306925_115134832	3300031890	Soil	MLQISVTICANHQKVMEESRRLEREGIAKIDEHIPTLILNVPDHRNEGLVIAALAKLTRNGFVTDFKSERVNK
Ga0306925_115455902	3300031890	Soil	MLQITVTVSANHEKVMEEARRLELEGIAKIHEHTSTLILNVPDQRNDEKVIAALAKLARKGLVTEFRSRWIK
Ga0306923_108343092	3300031910	Soil	MEVRMLQITVTICANHKKVMEEARRLEREGIAKIDEHIPTLILNVPDHRNEEMVIAALARLMRKGFVTDFKSNK
Ga0306923_118566802	3300031910	Soil	VSANHEKVMEEAQILELEGIAKIHEHTSTLILNVPDQQNDEKVIAALAKLARQGLVTEFIRQG
Ga0306923_122298601	3300031910	Soil	MLQITVTVCANEKKVMEEARRLELEGVVIHEQTPTLTLNVPDRRNEETVIATLARLARRG
Ga0306921_106919921	3300031912	Soil	MLQITVTVCAKEKKVMEEARRLELEGVVIHEQTPTLTLNVPDRRNEEMVIATLARLARKGFVTEFKSKWIK
Ga0306921_119140512	3300031912	Soil	MIFEVSAEMEVRMLQISVTICANHQKVMEEARRLEREGIAKIDEHMPTLILNVPDHRNEEMVIAALARLTRNGFVTDFKSERVNK
Ga0306921_125511661	3300031912	Soil	LQITITIAANQEKVMEETRRLEREGIAKIHEHIPTLILKVPYHRNEETVIAALARLARNGFVADFKSEWVNK
Ga0310912_102884574	3300031941	Soil	RMLQISVTICANHQKVMEESRRLEREGIAKIDEHIPTLILNVPDHRNEGLVIAALAKLTRNGFVTDFKSERVNK
Ga0310910_101460342	3300031946	Soil	MLQITVTVCANEKKVMEEARRLELEGVVIHEQTPTLTLNVPDRRNEEMVIATLARLARKGFVTEFKSKWVK
Ga0310910_110863431	3300031946	Soil	MLQITVTICANHQKVMEEARRLEREGIAKIDEHIPTLILNVPDHRNEEMVIAALARLM
Ga0310909_103387783	3300031947	Soil	MLQITVTVSANHEKVMEEAQILELEGIAKIHEHTSTLILNVPDQRNDEKVIAALAKLARK
Ga0310909_112321242	3300031947	Soil	MLHITVTICANHKKVMEEARRLEREGIAKIDEHIPTLILNVPDHRNEEMVIAALARLMRKGFVTDFRSNK
Ga0306926_108196083	3300031954	Soil	MLQITVTICANHQKVMEEARRLEREGIAKIDEHIPTLNLEVPDHRNEEMVIAALARLMRKGFVTDFKSNK
Ga0306926_114115963	3300031954	Soil	MLQITVTVCANEKKVMEEARRLELEGVVIHEQTPTLTLNVPDRRNEETVIATLARLARRGFVTEFKS
Ga0318530_103846502	3300031959	Soil	MTFEVSAEMEVRMLQISVTICANHQKVMEESRRLEREGIAKIDEHIPTLILNVPDHRNEGLVIAALAKLTRNGFVTDFKSERVNK
Ga0306922_102457703	3300032001	Soil	MTFEVSAEMEVRMLQITVTICANHQKVMEEARRLEREGIAKIDEHIPTLNLEVPDHRNEEMVIAALARLMRKGFVTDFKSNK
Ga0306922_107871041	3300032001	Soil	THEPRAEMEVRMLQISVTICANHQKVMEESRRLEREGIAKIDEHIPTLILNVPDHRNEGLVIAALAKLTRNGFVTDFKSERVNK
Ga0318558_105553142	3300032044	Soil	LQITVTVCANEKKVMEEARRLELEGVVIHEQTPTLTLNVPDRRNEEMVIATLARLARKGFVTEFKSKWIK
Ga0318532_103328441	3300032051	Soil	MLQITVTVCANEKKVMEEARRLELEGVVIHEQTPTLTLNVPDRRNEEMVIATLARLARKGFVTEFKSK
Ga0318570_105657282	3300032054	Soil	MLQITVTICANHEKVMGEARRLEREGIAKIDEHIPTLILNVPDHRNEEMVIAALARLTRKGFVTDFRSNK
Ga0318533_102419502	3300032059	Soil	MLHITVTICANHKKVMEEARRLEREGIAKIDEHIPTLILNVPDHRNEEMVIAALARLTRNGFVTDFKSERVNK
Ga0318533_108440092	3300032059	Soil	MTFEVSAEMEVRMLQISVTICANHQKVMEEARRLEREGIAKIDEHIPTLILNVPDHRNEEMVIAALARLTRNGFVTDLKSVTN
Ga0318505_103616331	3300032060	Soil	LQITITMSANQEKVMEEARRLELEGIAKIHEHTPTLTLNVPDQRNDEMVIAALARLARKGFVTEFKSKWIK
Ga0318504_105813391	3300032063	Soil	MLQISVTICANHQKVMEESRRLEREGIAKIDEHIPTLNLEVPDHRNEEMVIAALARLMRKGFVTDFKSNK
Ga0318510_101255751	3300032064	Soil	NATVEVRMLQITVTVCANEKKVMEEARRLELEGVVIHEQTPTLTLNVPDRRNEEMVIATLARLARKGFVTEFKSKWVK
Ga0318513_106668691	3300032065	Soil	TVCANEKKVMEEARRLELEGVVIHEQTPTLTLNVPDRRNEEMVIATLARLARKGFVTEFKSKWIK
Ga0318524_105402071	3300032067	Soil	MEVRMLQITVTICANHEKVMGEARRLEREGIAKIDEHIPTLSLNVPDHRNEEMVIAALARLMRKGFVTDFKSNK
Ga0306920_1017579612	3300032261	Soil	LQITVTVCANEKKVMEEARRLELEGVVIHEETPTLTLNVPDRRNEEMVIATLARLARKGFVTEFKSKWVK
Ga0306920_1029414601	3300032261	Soil	MTFEVSAEMEVRMLQISVTICANHLKVIEEARRLEREGIAKIDEHIPTLILNVPDHRNEEMVIAALARLTRKGFVTDFKSERVYKV
Ga0306920_1040329732	3300032261	Soil	VTICANHKKVMEEARRLEREGIAKIDEHIPTLILNVPDHRNEEMVIAALARLMRKGFVTDFKSNK
Ga0310914_106843651	3300033289	Soil	MLQITVTVSANHEKVMEEAQILELEGIAKIHEHTSTLILNVPDQRNDEKVIAALAKLARKGLVTEFRSRWIK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059388

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences