Metagenome / Metatranscriptome Family F059580

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059580
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	69 residues
Representative Sequence	MANPADKVTFGPKPILVGAAWALVATHALSGQQEHVIGFHSETEAKEWLASKGCKAWLKTRGY
Number of Associated Samples	76
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	3.08 %
% of genes near scaffold ends (potentially truncated)	41.35 %
% of genes from short scaffolds (< 2000 bps)	84.96 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (57.895 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (28.571 % of family members)
Environment Ontology (ENVO)	Unclassified (84.211 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (68.421 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 19.78% β-sheet: 23.08% Coil/Unstructured: 57.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF00536	SAM_1	4.51
PF00211	Guanylate_cyc	2.26
PF01545	Cation_efflux	2.26
PF07647	SAM_2	1.50
PF04964	Flp_Fap	1.50
PF13191	AAA_16	0.75
PF01642	MM_CoA_mutase	0.75
PF00582	Usp	0.75
PF14437	MafB19-deam	0.75
PF00856	SET	0.75
PF08332	CaMKII_AD	0.75
PF00027	cNMP_binding	0.75
PF00255	GSHPx	0.75
PF02586	SRAP	0.75
PF02195	ParBc	0.75
PF03235	DUF262	0.75
PF09361	Phasin_2	0.75
PF01161	PBP	0.75
PF13936	HTH_38	0.75
PF07883	Cupin_2	0.75
PF10604	Polyketide_cyc2	0.75
PF03949	Malic_M	0.75
PF13185	GAF_2	0.75
PF13628	DUF4142	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	2.26
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	2.26
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	2.26
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	2.26
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	1.50
COG0281	Malic enzyme	Energy production and conversion [C]	0.75
COG0386	Thioredoxin/glutathione peroxidase BtuE, reduces lipid peroxides	Defense mechanisms [V]	0.75
COG0686	Alanine dehydrogenase (includes sporulation protein SpoVN)	Amino acid transport and metabolism [E]	0.75
COG1479	DNAse/DNA nickase specific for phosphorothioated or glycosylated phage DNA, GmrSD/DndB/SspE family, contains DUF262 and HNH nuclease domains	Defense mechanisms [V]	0.75
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	0.75
COG1884	Methylmalonyl-CoA mutase, N-terminal domain/subunit	Lipid transport and metabolism [I]	0.75
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.75
COG4875	Protein kinase association domain CaMKII_AD, NTF2-like superfamily	Posttranslational modification, protein turnover, chaperones [O]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.89 %
All Organisms	root	All Organisms	42.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.89 %
cellular organisms	root	All Organisms → cellular organisms	42.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.89 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	33.83 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.89 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	27.07 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.50 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.89 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.53 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.01 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.75 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.75 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.01 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.50 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.50 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.75 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.75 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.75 %
Parvibaculaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae	0.75 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.01 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.50 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.50 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.75 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.75 %
Rhodoligotrophos	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Rhodoligotrophos	0.75 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.75 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.01 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.50 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.50 %
unclassified Methylocystis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis	0.75 %
Rhodoligotrophos appendicifer	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Rhodoligotrophos → Rhodoligotrophos appendicifer	0.75 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.75 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.75 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.01 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.50 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.50 %
Methylocystis sp. B8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. B8	0.75 %
Rhodoligotrophos appendicifer	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Rhodoligotrophos → Rhodoligotrophos appendicifer	0.75 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.75 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.75 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300009518\|Ga0116128_1143969	Not Available	684	Open in IMG/M
3300009518\|Ga0116128_1164145	Not Available	631	Open in IMG/M
3300009519\|Ga0116108_1055064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1254	Open in IMG/M
3300009519\|Ga0116108_1176548	Not Available	631	Open in IMG/M
3300009521\|Ga0116222_1190966	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300009523\|Ga0116221_1351626	Not Available	639	Open in IMG/M
3300009524\|Ga0116225_1205143	Not Available	890	Open in IMG/M
3300009524\|Ga0116225_1205994	Not Available	888	Open in IMG/M
3300009525\|Ga0116220_10506332	Not Available	548	Open in IMG/M
3300009547\|Ga0116136_1076788	Not Available	892	Open in IMG/M
3300009552\|Ga0116138_1093235	Not Available	837	Open in IMG/M
3300009552\|Ga0116138_1104824	Not Available	784	Open in IMG/M
3300009630\|Ga0116114_1061641	Not Available	1039	Open in IMG/M
3300009631\|Ga0116115_1065466	Not Available	951	Open in IMG/M
3300009634\|Ga0116124_1014487	All Organisms → cellular organisms → Bacteria	2729	Open in IMG/M
3300009636\|Ga0116112_1230904	Not Available	511	Open in IMG/M
3300009637\|Ga0116118_1034263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1851	Open in IMG/M
3300009637\|Ga0116118_1038532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	1732	Open in IMG/M
3300009639\|Ga0116122_1143181	Not Available	762	Open in IMG/M
3300009639\|Ga0116122_1288085	Not Available	505	Open in IMG/M
3300009641\|Ga0116120_1203345	Not Available	627	Open in IMG/M
3300009641\|Ga0116120_1207156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	620	Open in IMG/M
3300009641\|Ga0116120_1229553	Not Available	584	Open in IMG/M
3300009645\|Ga0116106_1047593	Not Available	1436	Open in IMG/M
3300009645\|Ga0116106_1077370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1087	Open in IMG/M
3300009645\|Ga0116106_1132771	Not Available	799	Open in IMG/M
3300009646\|Ga0116132_1161347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	682	Open in IMG/M
3300009683\|Ga0116224_10458410	Not Available	607	Open in IMG/M
3300009700\|Ga0116217_10696258	Not Available	629	Open in IMG/M
3300009764\|Ga0116134_1057617	Not Available	1470	Open in IMG/M
3300009764\|Ga0116134_1122834	Not Available	927	Open in IMG/M
3300009824\|Ga0116219_10048472	All Organisms → cellular organisms → Bacteria → Spirochaetes	2523	Open in IMG/M
3300009824\|Ga0116219_10207957	Not Available	1119	Open in IMG/M
3300009839\|Ga0116223_10411960	Not Available	794	Open in IMG/M
3300009839\|Ga0116223_10413470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	792	Open in IMG/M
3300009839\|Ga0116223_10575171	Not Available	652	Open in IMG/M
3300009839\|Ga0116223_10643852	All Organisms → cellular organisms → Bacteria → Proteobacteria	610	Open in IMG/M
3300010341\|Ga0074045_10563909	Not Available	728	Open in IMG/M
3300010341\|Ga0074045_10761604	Not Available	613	Open in IMG/M
3300010343\|Ga0074044_10329204	Not Available	1003	Open in IMG/M
3300010379\|Ga0136449_100107699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5680	Open in IMG/M
3300010379\|Ga0136449_100213282	All Organisms → cellular organisms → Bacteria → Proteobacteria	3647	Open in IMG/M
3300010379\|Ga0136449_100353205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. B8	2640	Open in IMG/M
3300010379\|Ga0136449_100859183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1487	Open in IMG/M
3300010379\|Ga0136449_101629708	Not Available	978	Open in IMG/M
3300010379\|Ga0136449_102235348	Not Available	796	Open in IMG/M
3300014153\|Ga0181527_1065084	Not Available	1864	Open in IMG/M
3300014156\|Ga0181518_10061735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2196	Open in IMG/M
3300014158\|Ga0181521_10092887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1877	Open in IMG/M
3300014158\|Ga0181521_10286953	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300014158\|Ga0181521_10590297	Not Available	522	Open in IMG/M
3300014159\|Ga0181530_10025036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4415	Open in IMG/M
3300014159\|Ga0181530_10210847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1063	Open in IMG/M
3300014159\|Ga0181530_10424533	Not Available	673	Open in IMG/M
3300014162\|Ga0181538_10214328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1075	Open in IMG/M
3300014162\|Ga0181538_10480903	Not Available	655	Open in IMG/M
3300014162\|Ga0181538_10499271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	641	Open in IMG/M
3300014162\|Ga0181538_10504196	All Organisms → cellular organisms → Bacteria → Proteobacteria	637	Open in IMG/M
3300014162\|Ga0181538_10622808	Not Available	562	Open in IMG/M
3300014164\|Ga0181532_10625539	Not Available	583	Open in IMG/M
3300014165\|Ga0181523_10259440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	990	Open in IMG/M
3300014165\|Ga0181523_10785410	Not Available	519	Open in IMG/M
3300014200\|Ga0181526_10051924	All Organisms → cellular organisms → Bacteria	2617	Open in IMG/M
3300014200\|Ga0181526_10909877	Not Available	553	Open in IMG/M
3300014638\|Ga0181536_10048644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2821	Open in IMG/M
3300014638\|Ga0181536_10388618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Rhodoligotrophos → Rhodoligotrophos appendicifer	626	Open in IMG/M
3300016730\|Ga0181515_1413029	Not Available	615	Open in IMG/M
3300017822\|Ga0187802_10273685	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300017929\|Ga0187849_1332367	Not Available	563	Open in IMG/M
3300017933\|Ga0187801_10330503	Not Available	624	Open in IMG/M
3300017938\|Ga0187854_10014464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4680	Open in IMG/M
3300017938\|Ga0187854_10231744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	806	Open in IMG/M
3300017938\|Ga0187854_10238855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	791	Open in IMG/M
3300017940\|Ga0187853_10108037	Not Available	1363	Open in IMG/M
3300017940\|Ga0187853_10303674	All Organisms → cellular organisms → Bacteria → Proteobacteria	721	Open in IMG/M
3300017943\|Ga0187819_10355454	Not Available	846	Open in IMG/M
3300017946\|Ga0187879_10065945	All Organisms → cellular organisms → Bacteria	2109	Open in IMG/M
3300017946\|Ga0187879_10069940	All Organisms → cellular organisms → Bacteria → Proteobacteria	2039	Open in IMG/M
3300017946\|Ga0187879_10144975	Not Available	1345	Open in IMG/M
3300017955\|Ga0187817_10301863	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300017955\|Ga0187817_10467712	Not Available	804	Open in IMG/M
3300017955\|Ga0187817_10699934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	646	Open in IMG/M
3300017975\|Ga0187782_10541597	Not Available	892	Open in IMG/M
3300017995\|Ga0187816_10166963	Not Available	954	Open in IMG/M
3300018001\|Ga0187815_10465516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	540	Open in IMG/M
3300018002\|Ga0187868_1216689	Not Available	658	Open in IMG/M
3300018005\|Ga0187878_1135092	Not Available	970	Open in IMG/M
3300018009\|Ga0187884_10451495	Not Available	517	Open in IMG/M
3300018014\|Ga0187860_1336303	Not Available	577	Open in IMG/M
3300018017\|Ga0187872_10093454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1517	Open in IMG/M
3300018017\|Ga0187872_10299988	Not Available	703	Open in IMG/M
3300018019\|Ga0187874_10261722	Not Available	708	Open in IMG/M
3300018019\|Ga0187874_10321937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	628	Open in IMG/M
3300018019\|Ga0187874_10373634	Not Available	576	Open in IMG/M
3300018020\|Ga0187861_10135536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1150	Open in IMG/M
3300018023\|Ga0187889_10469698	Not Available	538	Open in IMG/M
3300018024\|Ga0187881_10020655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3648	Open in IMG/M
3300018025\|Ga0187885_10357610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	657	Open in IMG/M
3300018026\|Ga0187857_10279005	Not Available	765	Open in IMG/M
3300018030\|Ga0187869_10468263	Not Available	599	Open in IMG/M
3300018030\|Ga0187869_10539201	Not Available	553	Open in IMG/M
3300018034\|Ga0187863_10521948	Not Available	665	Open in IMG/M
3300018035\|Ga0187875_10253290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	961	Open in IMG/M
3300018037\|Ga0187883_10054019	All Organisms → cellular organisms → Bacteria → Proteobacteria	2124	Open in IMG/M
3300018037\|Ga0187883_10080957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1700	Open in IMG/M
3300018037\|Ga0187883_10445846	Not Available	665	Open in IMG/M
3300018037\|Ga0187883_10654220	Not Available	547	Open in IMG/M
3300018038\|Ga0187855_10304040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	933	Open in IMG/M
3300018040\|Ga0187862_10589841	Not Available	659	Open in IMG/M
3300018040\|Ga0187862_10889649	Not Available	510	Open in IMG/M
3300018044\|Ga0187890_10301165	Not Available	900	Open in IMG/M
3300018046\|Ga0187851_10841927	All Organisms → cellular organisms → Bacteria → Proteobacteria	516	Open in IMG/M
3300018047\|Ga0187859_10546202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	649	Open in IMG/M
3300018090\|Ga0187770_10792492	Not Available	758	Open in IMG/M
3300025444\|Ga0208189_1085442	Not Available	561	Open in IMG/M
3300025496\|Ga0208191_1105634	Not Available	570	Open in IMG/M
3300025507\|Ga0208188_1015391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2350	Open in IMG/M
3300025507\|Ga0208188_1066459	Not Available	867	Open in IMG/M
3300025576\|Ga0208820_1062027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1005	Open in IMG/M
3300025576\|Ga0208820_1100078	Not Available	711	Open in IMG/M
3300027854\|Ga0209517_10153245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1473	Open in IMG/M
3300027854\|Ga0209517_10286476	Not Available	969	Open in IMG/M
3300027854\|Ga0209517_10393756	Not Available	780	Open in IMG/M
3300029889\|Ga0246001_1022549	Not Available	1795	Open in IMG/M
3300030659\|Ga0316363_10083293	All Organisms → cellular organisms → Bacteria	1447	Open in IMG/M
3300030659\|Ga0316363_10134441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1072	Open in IMG/M
3300032160\|Ga0311301_10024177	All Organisms → cellular organisms → Bacteria	16600	Open in IMG/M
3300032160\|Ga0311301_10028299	All Organisms → cellular organisms → Bacteria	14814	Open in IMG/M
3300032160\|Ga0311301_11875225	Not Available	708	Open in IMG/M
3300032160\|Ga0311301_11989708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	679	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	74.44%
Terrestrial	Environmental → Terrestrial	25.56%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	74.44%
Soil	Environmental → Terrestrial → Soil	24.81%
Peat	Environmental → Terrestrial → Peat	0.75%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	74.44%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	21.05%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	43.61%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	24.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.05%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.02%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	28.57%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	24.81%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	21.05%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	15.04%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.02%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.26%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.50%
Peat	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009631	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100	Environmental	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009636	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009646	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300016730	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300025444	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40 (SPAdes)	Environmental	Open in IMG/M
3300025496	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40 (SPAdes)	Environmental	Open in IMG/M
3300025500	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes)	Environmental	Open in IMG/M
3300025507	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40 (SPAdes)	Environmental	Open in IMG/M
3300025576	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300029889	Peat microbial communities from Marcell Experimental Forest bog in Minnesota, USA - MG_T3F_30cm	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0116128_11439691	3300009518	Peatland	MASPADKVTFDPKPILVGAAWALVATHALSGQREQVIGFHSETEAKEWLA
Ga0116128_11641451	3300009518	Peatland	MANPADNVTFNPRPILEGAAWALVATHALSGQREQVIGFHSETEAKEWLASKGCKAWLKTRGYANWTTTFATPPTRQPPT*
Ga0116108_10550642	3300009519	Peatland	MANIADTVTFDPKPIRIGVAWGLVATHALSGQQEHIVGFHSETEAKEWLASKGCEAWLKTRGYLN*
Ga0116108_11466742	3300009519	Peatland	MANPADKVTFGPKPILVGAAWALVATHALSGQQEHVIGFHSETEAKEWLASKGCKAWLKTRGYENWTRSPALRALPEAHRPR*
Ga0116108_11765482	3300009519	Peatland	PSMANPADTVTFNPRPIRLGLAWGLVATHALSGQQEHIVGFHTATEAKEWLASKGCKAWLRTRGYANQREIRTSKNSN*
Ga0116222_11909662	3300009521	Peatlands Soil	MANAADNVTFNPKPILVGAAWALVATHALSGQQEQVIGFHSEAEAKEWLTSKGFKAWLKTRGYANWTTTFATPPTPQPPT*
Ga0116221_13516261	3300009523	Peatlands Soil	MANSADKVTFNPRPILVGAAWALVATHALSGQQEQVIGFHSEAEAKEWLTSKGFKAWLKTRGYANWTTTFATPPTPQPPT*
Ga0116225_12051432	3300009524	Peatlands Soil	MANSADKVTFNPRPILVGAAWALVATHALSGQQEQVIGFHSETEAKEWLASKGCKAWLKTRGYANWITTFATPPTPQSPT*
Ga0116225_12059942	3300009524	Peatlands Soil	MANHADKVTFDPRPIRPGIAWALVARHALSGQQEHIIGFHSEEEAKEWLASKGCKAWLKTRGYLN*
Ga0116220_105063321	3300009525	Peatlands Soil	MANPTDKVTFDPKPILVGAAWALVATHAFSGQQEQVIGFHSETEAKEWLASKGCKAWLKTRGYANWTTTFATPPTPQPPT*
Ga0116136_10767882	3300009547	Peatland	MTNPADEVTFKPKPILVGAAWALVATHALSGQQEQVIDFHSETEAKEWLASKGCKAWLKTRGYANWTTTFATPPTRQPPT*
Ga0116138_10932351	3300009552	Peatland	MANPADTVTFNPRPIRLGLAWGLVATHALSGQQEHIVGFHTATEAKEWLASKGCKAWLRTRGYANQREIRTLPNLPRAMS*
Ga0116138_11048242	3300009552	Peatland	MADPADTVTFSPRPIRLGLAWVLVARHALSGQQEHIVGFHTPTEAKEWFTSKGCR
Ga0116114_10616411	3300009630	Peatland	MASPADKVTFDPKPILVGAAWALVATHALSRQQEHVIGFHSETEAKEWLASKGCKAWLKTRGYVNWTPTFATSPTQQRPT*
Ga0116115_10654661	3300009631	Peatland	MANPADNVTFNPRPILVGAAWALVAIHAISGQREHVIGFHSETEAKQWLASKGCKAWLKTRGYVNWTPTFVTSSTRQRPT*
Ga0116124_10144871	3300009634	Peatland	KVTFDPKPILVGAAWALVATHALSRQQEHVIGFHSETEAKEWLASKGCKAWLKTRGYVNWTPTFATSPTQQRPT*
Ga0116112_12309041	3300009636	Peatland	MANPVDNVTFNPKPILVGAAWALVATHALSGQREQVIGFHSETEAKEWLASKGCKAWLKTRGYANWTTTFATSPTSQRPA*
Ga0116118_10342633	3300009637	Peatland	MTNPADEVTFKPKPILVGAAWALVATHALSGQQEQVIGFHSETEAKEWLASKGCKA*
Ga0116118_10385323	3300009637	Peatland	MANPADKVTFDPRPIRLGLPWGLVATHALSGQQEHIVGFHTATEAKEWLASKGCKAWLRTRGYANQREIRTSKNSN*
Ga0116122_11431812	3300009639	Peatland	MANPAAKVTFDPKPILVGAAWALVATHALSGQREQVIGFHSETEAKEWLASKGCKAWLKTRGYANWTTTFATPPTRQPPT*
Ga0116122_12880851	3300009639	Peatland	MANPADKVTFGPKPILVGAAWALVATHALSGQQEHVIGFHSETEAKEWLASKGCKAWLKTRGYENWTRSPALRALPEAHR
Ga0116120_12033451	3300009641	Peatland	MANPADKVTFGPKPILVGAAWALVATHALSGQQEHVIGFHSETEAKE
Ga0116120_12071562	3300009641	Peatland	MVGSTDKVTFNPKPIRLGLAWGLVATRALSGQQENIVGFHTETEAKEWLASAHGLRKSSLRAL
Ga0116120_12295531	3300009641	Peatland	MASPADKVTFDPKPILVGAAWALVATHALSRQQEHVIGFHSETEAKEWLASKGCKAW
Ga0116106_10475932	3300009645	Peatland	MANPADTVTFNPRPIRLGLAWGLVATHALSGQQEHIVGFHTATEAKEWLASKGCKAWLRTRGYANQREIRTLRSAF*
Ga0116106_10773701	3300009645	Peatland	MVGSTDKVTFNPKPIRLGLAWGLVATRALSGQQENIVGFHTETEAKEWFASKGYGARLRTRGY
Ga0116106_11327711	3300009645	Peatland	MANPADNVTFNPRPILVGAAWALVATHALSGQREQFIGFHSETEAKEWLASKGCKAWLGPRIIQCGL*
Ga0116132_11613472	3300009646	Peatland	MVNPADNVTFDPKPIRLGVAWGLVATHALSGQQEHIVGFHSETEAKEWLASKGCEAWLKTRGYLN*
Ga0116224_104584102	3300009683	Peatlands Soil	ANPADKVTFDPKPIRLGVAWGLVARHALSGQQEHIIGFHSETEAKEWLASKGCKAWLKTRGYLN*
Ga0116217_106962581	3300009700	Peatlands Soil	MANPADKVTFNPKPILVGAAWALVATHALSGQQEQVIGFHSEAEAKEWLTSKGFKAWLKTRGYANWTTTFATPPTPQPPT*
Ga0116134_10576171	3300009764	Peatland	MANPADKVTFDPSPIRLGLAWGLVATHALSGQQEHIVGFHTATEAKEWLASKG
Ga0116134_11228341	3300009764	Peatland	MANPADKVTFGPKPILVGAAWALVATHALSGQQEHVIGFHSETEAKEWLASKGCKAWLKTRGY
Ga0116134_13034391	3300009764	Peatland	PIRLGLPWGLVATHALSGQQEHIVGFHTATEAKEWLASKGCKAWLRTRGYANQREIRTSKNSN*
Ga0116219_100484722	3300009824	Peatlands Soil	MANPADNVTFNPKPILVGAAWALVATHALSGQQEQVIGFHSEAEAKEWLASKGCKAWLKTRGYANWTTTFATPPTPQPPI*
Ga0116219_102079572	3300009824	Peatlands Soil	MANPADTVTFNPRPIRLGLAWGLVATHALSGQQEHIVGFHTATEAKEWLASKGCKVWLRTRGCANQREIRTLRSAF*
Ga0116223_104119601	3300009839	Peatlands Soil	KPILVGAAWALVATHALSGQQEQVIGFHSEAEAKEWLASKGCKAWLKTRGYANWTTTFATPPTPQPPI*
Ga0116223_104134701	3300009839	Peatlands Soil	MANRADKVTFDPKPIRLGVAWGLVARHALSGQQEHIVGFHSETEAKEWLAGKGCKAWLKTRGYLN*
Ga0116223_105751713	3300009839	Peatlands Soil	MANPADTVTFNPRPIRLGLAWGLVATHALSGQQEHIVGFHTATEAKEWLASKGCKA
Ga0116223_106438521	3300009839	Peatlands Soil	MANHADKVTFDPRPIRPGIAWALVARHALSGQQEHIIGFHSEEEAKEWLASKGCKAWLKTRG
Ga0074045_105639092	3300010341	Bog Forest Soil	PSMANPADNVTFNPKPILVGAAWALVATHALSGQREHVIGFHSETEAEEWLASKGCKAWLKTRGYANWTATFATLAESPKFMG*
Ga0074045_107616042	3300010341	Bog Forest Soil	MANPADKVTFDPKPIRLGAAWGLVARHALSGQQEHIIGFHSETEAKEWLASKGCKAWLKTRGYLN*
Ga0074044_103292041	3300010343	Bog Forest Soil	MANPADKVTFDPKPIRLGVAWGLVARHALSGQQEHIIGFHSETEAKEWLASKGCKAWLKTRGYLN*
Ga0136449_1001076997	3300010379	Peatlands Soil	MANPADNVTFNPKPILVGVAWALVATHALSGQQEQVIGFHSEAEAKEWLASKGCKAWLKTRGYANWTTTFATPPTPQPPI*
Ga0136449_1002132825	3300010379	Peatlands Soil	MVDRADKVTFDPKPIRLGVAWGLVATHALSGQQEHIVGFHSETEAKEWLASKGCEAWLKTRGYLN*
Ga0136449_1003532055	3300010379	Peatlands Soil	MANPADQVTFNPKPILVGAAWALVATHALSGQREQVIGFHSETEAKEWLASKGCKAWLKTRGYANWITTFATPPTPQSPT*
Ga0136449_1008591833	3300010379	Peatlands Soil	MANPADKVTFDPKPIRLGVAWGLVARHALSGQQEHIIGFHNETEAKEWLASKGCKAWLKTRGYLN*
Ga0136449_1016297081	3300010379	Peatlands Soil	MANHADKVTFDPRPIRLGIAWALVARHALSGQQEHIIGFHSEEEAKEWLASKGCKAWLKTRGYLN*
Ga0136449_1022353481	3300010379	Peatlands Soil	MADSADKVIINPKPIRLGLAWGLVATHALSGQQEHIVGFHTETEAKEWLASKGYR
Ga0181527_10650843	3300014153	Bog	MANPAAKVTFDPKPILVGAAWALVATHALSGQREQVIGFHSETEAKEWLASKGCKAWLKTRGYANSTTTFATPPTRQPPT*
Ga0181518_100617354	3300014156	Bog	MANAADNVTFNPKPILVGAAWALVATHALSGQREQVIGFHSETEAKEWLASKGCKAWLKTRGYANWTTTFATPPTRQPPI*
Ga0181521_100928871	3300014158	Bog	MANPADTVTFNPRPILVGIAWALVATHALSGQQEQVIGFHSETEAKEWLASNGCKAWLRTRGYANWTTTFATPPTPQPPS*
Ga0181521_102869532	3300014158	Bog	MANAADNVTFNPKPILVGAAWALVATHSLSGQQEQVIGFHSETEAKEWLASKGCKAWLK
Ga0181521_105902971	3300014158	Bog	MANSADKLTFNPKPILVGAAWALVATHALSGQQEQVIGFHSETEAKEWLAS
Ga0181530_100250363	3300014159	Bog	MADRADKVTFDPKPIRLGVAWGLVATHALSGQQEHIVGFHSETEAKEWLASKGCEAWLKTRGYLN*
Ga0181530_102108471	3300014159	Bog	MANSADKLTFNPKPILVGAAWALVATHALSGQQEQVIGFHSETEAKEWLASKGCKAWLKTRGYANWTTTFATPPT
Ga0181530_104245331	3300014159	Bog	MANPAAKVTFDPKPILVGAAWALVATHALSGQREYVIGFHSETEAKEWLASKGCKAWLKTRGYANWTTTFATSPTSQRPA*
Ga0181538_102143281	3300014162	Bog	MANPADTVTFNPRPIRLGLAWGLVATHALSGQQEHIVGFHTATEAKEWLASKGCKAWLRT
Ga0181538_104809031	3300014162	Bog	MANPVDNVTFNPKPILVGAAWALVATHALSGQREQVIGFHSETEAKEWLGSKGCKAWLKTRGYANWTTTFATPPTRQ
Ga0181538_104992712	3300014162	Bog	MATVADNVTFNAEPIKIGLVWGLVATHGLSGQQEHVLGFHSEAEAKEWIAGRGCAAWLKTRGYVG
Ga0181538_105041962	3300014162	Bog	MANPADKVTFQPKPVEIGRSWGLVATHGLSGQQEHVIGFHTASEAKEWLASKGYKAWLKTRGYTSEAP
Ga0181538_106228082	3300014162	Bog	MANIAEYTVTFDPKPIRIGVAWGLVATHALSGQQEHIVGFHTETEAKEWLASKGCKAWLRTRGYVN*
Ga0181532_106255392	3300014164	Bog	MVDSADKVTFDPKLIRLGVAWGLVATHTLSGRQEHIVGFHSETEAKEWLASKGCEAWLKTRGYLN*
Ga0181523_102594402	3300014165	Bog	MANPADKVTFDARPIRLGLAWGLVATHALSGQQEHIVGFHTATEAKEWLASK
Ga0181523_107854102	3300014165	Bog	MADSTDKVTFNPKPIRLGLAWGLVATHALSGQQEHIVGFHTETEAKEWLASKGYR
Ga0181526_100519241	3300014200	Bog	MADSTDKVTFNPKPVRLGSAWGLVATHALSGQQEHVVGFHTETEAKEWLASKGYR
Ga0181526_109098772	3300014200	Bog	MANPADKVTFGPKPILVGAAWALVATHALSGQQEHVIGFHSETEAKEWLASKGCKAWLGPRIIQCGL*
Ga0181536_100486447	3300014638	Bog	MANPAAKVTFDPKPILVGAAWALVATHALSGQREQVIGFHSETEAKEWLGS
Ga0181536_103886183	3300014638	Bog	MANSADKLTFNPKPILVGAAWALVATHALSGQREQVIGFHSETEAKEWLGS
Ga0181515_14130291	3300016730	Peatland	MANPADKVTFDPRPIRLGLPWGLVATHALSGQQEHIVGFHTATEAKEWLASKGCKAWLRTRGYANQREIRTLRSAF
Ga0187802_102736851	3300017822	Freshwater Sediment	MANPADKVTFDPKPILVGAAWALVATHALSRQQEHVIGFHSETEAKEWLASKGCKAWLRTRGYIN
Ga0187849_13323671	3300017929	Peatland	MGNIADTVTFDPKPIRIGVAWGLVATHALSGQQEHIVGFHTETEAKEWLASKGCKAWLKTRGYVNWTPTFATSPTQQRPT
Ga0187801_103305031	3300017933	Freshwater Sediment	LSHTTRSYGSLMLLTRYMANPDDKVTFNPKPILVGVVWALVATHAVSGQQEHVVGFHTATEAKEWLVSKGCKAWLRTRGYENWSTAFATSPTRQPLT
Ga0187854_100144647	3300017938	Peatland	MANPADTVTFNPRPIRLGLAWGLVATHALSGQQEHIVGFHTATEAKEWLASKGCKAWLRTRGYANQREIRTLPNLPRAMS
Ga0187854_102317442	3300017938	Peatland	MVGSTDKVTFNPKPIRLGLAWGLVATHALSGQQEHVVGFHTETEAKEWFASKGYGAWLRTRGYVKPITTFATPGKS
Ga0187854_102388554	3300017938	Peatland	MVDRADKVTFDPKPIRLGVAWGLVATHALSGQQEHIVGFHSETEAKEWLASKGCEAWLKTRGYLN
Ga0187853_101080371	3300017940	Peatland	MANPAAKVTFDPKPILVGAAWALVATHALSGQREQVIGFHSETEAKEWLASKGCKAWLKTRGYANWTTTFATPPTRQPPT
Ga0187853_103036742	3300017940	Peatland	MVNPADNVTFDPKPIRLGVAWGLVATHALSGQQEHIVGFHSETEAKEWLASKGCEAWLKTRGY
Ga0187819_103554541	3300017943	Freshwater Sediment	MANRADKVTFNPKPIRLGVAWGLVARHALSGQQEHIVGFHSETEAKEWLAGKGCKAWLKTRGYLKLMPIEKWQGRT
Ga0187879_100659454	3300017946	Peatland	MANPADKVTFGPKPILVGAAWALVATHALSGQQEHVIGFHSETEAKEWLASKGCKAWLKTRGYENWTRSPALRALPEAHRPR
Ga0187879_100699401	3300017946	Peatland	MANPADKVTFQPKPVEIGRSWGLVATHGLSGQQEHVIGFHTASEAKEWLASKGYKAWLKTRGYTS
Ga0187879_101449752	3300017946	Peatland	MANPADNVTFNPRPILVGAAWALVATHALSGQREQFIGFHSETEAKEWLASKGCKAWLGPRIIQCGL
Ga0187817_103018631	3300017955	Freshwater Sediment	MANPADKVTFNPKPILVGAAWALVATHAPSGQQEHVVGFHTATEAKEWLVSKGCKAWLRTRGYANWTTNSPRLQNP
Ga0187817_104677121	3300017955	Freshwater Sediment	MANPTDKVTFNPKPILVGAAWALVATHALSGQQEQVIGFHSETEAKEWLASKGCKAWLKTRGYANWTATFATSPRRQRPTPQASNFGTRHPET
Ga0187817_106999342	3300017955	Freshwater Sediment	MANHADKVTFDPRPIRLGIAWALVARHALSGQQEHIIGFHSEEEAKEWLASKGCKAWLKTRGYLN
Ga0187782_105415971	3300017975	Tropical Peatland	MWSAADKVTFDPKPIKLGRVWGLLATHLLSGQQEHIVGFHSEAEAKEWLASKACAAWLKTRSYVH
Ga0187816_101669631	3300017995	Freshwater Sediment	MANPADKVSFDPRPILVGAAWVLVATHALSGQREHVIGFHSETEAMEWLASKGCKAWLKTRGYINWTPTFATSPTQQRPT
Ga0187815_104655161	3300018001	Freshwater Sediment	MGNPADSVTFNPKPILVGAAWALVATHALSGQQEQVIGFHSETEAKEWLASKGCKAWLKTRGYANWTTNSPRLQNP
Ga0187868_12166892	3300018002	Peatland	MASPADKVTFDPKPILVGAAWALVATHALSRQQEHVIGFHSETEAKEWLASKGCKAWLKTRG
Ga0187878_11350921	3300018005	Peatland	MASPADKVTFDPKPILVGAAWALVATHALSRQQEHVIGFHSETEAKEWLASKGCKAWLKTRGYANWTTTFATSPTSQRPA
Ga0187884_104514952	3300018009	Peatland	MANPADKVTFDPSPIRLGLAWGLVATHALSGQQEHIVGFHTATEAKEWLASKGC
Ga0187860_13363031	3300018014	Peatland	MANPADKVTFDPKPIRLGVAWGLVARHALSGQQEHIVGFHSETEAKEWLASKGCRAWLKTRGHLNYAWEA
Ga0187872_100934543	3300018017	Peatland	MTNPADEVTFKPKPILVGAAWALVATHALSGQQEQVIGFHSETEAKEWLASKGCKAWLK
Ga0187872_102999881	3300018017	Peatland	MANPAAKVTFDPKPILVGAAWALVATHALSGQREQVIGFHSETEAKEWLASKGCKAWLKTRGYANWTTTF
Ga0187874_102617222	3300018019	Peatland	MADSADKVIINPKPIRLGLAWGLVATHALSGQQEHIVGFHTETEAKEWLASKGYRAWLRT
Ga0187874_103219371	3300018019	Peatland	MVDRADKVTFDPKPIRLGVAWGLVATHALSGQQEHIVGFHSETEAKEWLASKGCEAWLKT
Ga0187874_103736341	3300018019	Peatland	MANPADTVTFNPRPIRLGLAWGLVATHALSGQQEHIVGFHTATEAKEWLASKGCKAWLRTRGYANQREIRTSKNSN
Ga0187861_101355361	3300018020	Peatland	MANPADNVTFNPRPILVGAAWALVAIHAISGQREHVIGFHSETEAKQWLASKGCKAWLKTRGYVNWTPTFVTS
Ga0187889_104696981	3300018023	Peatland	MANPAAKVTFDPKPILVGAAWALVATHALSGQREHVIGFHSETEAKEWLASKGCKAWLKTRGYANWTTTFATSPTSQ
Ga0187881_100206552	3300018024	Peatland	MANPAAKVTFDPKPILVGAAWALVATHALSRQQEHVIGFHSETEAKEWLASKGCKAWLKTRGYVNWTPTFATSPTQQRPT
Ga0187885_103576102	3300018025	Peatland	MTNPADEVTFKPKPILVGAAWALVATHALSGQQEQVIGFHSETEAKEWLASKGCKAWLKT
Ga0187857_102790051	3300018026	Peatland	MANPAAKVTFDPKPILVGAAWALVATHALSGQREYVIGFHSETEAKEWLASKGCKAWLKTRGYANWTTTFATSPTSQRPA
Ga0187869_104682632	3300018030	Peatland	MADSADKVIINPKPIRLGLAWGLVTTRALSGQQENIVGFHTETEAKERFASKGYGAR
Ga0187869_105392011	3300018030	Peatland	MANPAAKVTFDPKPILVGAAWALVATHALSGQREYVIGFHSETEAKEWLARQRMQGVAQ
Ga0187863_105219482	3300018034	Peatland	ADTVTFNPRPIRLGLAWGLVATHALSGQQEHIVGFHTATEAKEWLASKGCKAWLRTRGYANQREIRTSKNSN
Ga0187875_102532902	3300018035	Peatland	MVDRADKVTFDPKPIRLGVAWGLAATHALSGQQEHIVGFHSETEAKEWLASKGCEAWLKTRGYLN
Ga0187883_100540194	3300018037	Peatland	MADRADKVTFDPKPIRLGVAWGLAATHALSGQQEHIVGFHSETEAKEWLASKGCEAWLKTRGYLN
Ga0187883_100809572	3300018037	Peatland	LDMATVADNVTFNAEPIKIGLVWGLVATHGLSGQQEHVLGFHSEAEAKEWIAGRGCAAWLKTRGYIGQF
Ga0187883_104458462	3300018037	Peatland	MANPADKVTFNPGPILVGAAWALVATHALSGQREQVIGFHSETEAKEWLAS
Ga0187883_106542201	3300018037	Peatland	MANPVDNVTFNPKPILVGAAWALVATHALSGQREQVIGFHSETEAKEWLGSKGCKAWLKTRGYANWTTTFATPPTRQPPT
Ga0187855_103040401	3300018038	Peatland	MVNPADNVTFDPKPIRLGVAWGLVATHALSGQQEHIVGFHSETEAKEWLASKGCEAWLKTRGYLN
Ga0187862_105898412	3300018040	Peatland	MANPADKVTFDPSPIRLGLAWGLVATHALSGQQEHIVGFHTATEAKEWLASKGCGAWLRTRGYANQREIRTSKNSN
Ga0187862_108896493	3300018040	Peatland	QWLKRRILLGMVDRADKVTFDPKPIRLGVAWGLVATHALSGQQEHIVGFHSETEAKEWLASKGCEAWLKTRGYLN
Ga0187890_103011652	3300018044	Peatland	MANPVDNVTFNPKPILVGAAWALVATHALSGQREQVIGFHSETEAKEWLASKGCKAWLKTRGYANWTTTFATPPTRQPPT
Ga0187851_108419271	3300018046	Peatland	MADRADKVTFDPKPIRLGVAWGLVATHALSGQQEHIVGFHSETEAKEWLASKGCEAWLKT
Ga0187859_105462022	3300018047	Peatland	MADRADKVTFDPKPIRLGVAWGLVATHALSGQQEHIVGFHSETEAKEWLASKGCEAWLKTRGYLN
Ga0187770_107924921	3300018090	Tropical Peatland	PADTVTFNPRPIRLGLAWGLVATHALSGQQEHIVGFRTATEAKEWLASKGCKAWLRTRGYANQREIRTLRSAF
Ga0208189_10854421	3300025444	Peatland	MASPADKVTFDPKPILVGAAWALVATHALSRQQEHVIGFHSETEAKEWLASKGCKAWLKTRGYVNWTPTF
Ga0208191_11056342	3300025496	Peatland	SMANPAAKVTFDPKPILVGAAWALVATHALSGQREQVIGFYSETEAKEWLASKGCKAWLKTRGYANWTTTFATPPTRQPPT
Ga0208686_10577631	3300025500	Peatland	MVGSTDKVTFNPKPIRLGLAWGLVATRALSGQQENIVGFHTETEAKEWFASKGYGARLRTRGYVKPITTFAT
Ga0208188_10153914	3300025507	Peatland	MVGSTDKVTFNPKPIRLGLAWGLVATRALSGQQENIVGFHTETEAKEWFASKGYGARLRT
Ga0208188_10664591	3300025507	Peatland	MANPADKVTFDPRPIRLGLPWGLVATHALSGQQEHIVGFHTATEAKEWLASKGCK
Ga0208820_10620271	3300025576	Peatland	MTNPADEVTFKPKPILVGAAWALVATHALSGQQEQVIGFHSETEAKEWLASKGCKAWLKTRGYANWTSTFATPPTPQPPT
Ga0208820_11000781	3300025576	Peatland	MANPADTVTFNPRPIRLGLAWGLVATHALSGQQEHIVGFHTATEAKEWLASKGCKAWLRTRGYANQREIRTLRSAF
Ga0209517_101532451	3300027854	Peatlands Soil	MANHADKVTFDPRPIRPGIAWALVARHALSGQQEHIIGFHSEEEAKEWLASKGCKAWLKTRGYLN
Ga0209517_102864762	3300027854	Peatlands Soil	MANAADNVTFNPKPILVGAAWALVATHALSGQQEQVIGFHSEAEAKEWLTSKGFKAWLKTRGYANWTTTFATPPTPQRPT
Ga0209517_103937562	3300027854	Peatlands Soil	MANPADKVTFDPKPIRLGVAWGLVARHALSGQQEHIIGFHNETEAKEWLASKGCKAWLKTRGYLN
Ga0246001_10225491	3300029889	Peat	MASPADKVTFDPKPILVGAAWALVATHALSRQQEHVIGFHSETEAKEWLASKGCKAWLKT
Ga0316363_100832931	3300030659	Peatlands Soil	MANAADNVTFNPKPILVGAAWALVATHALSGQQEQVIGFHSEAEAKEWLTSKGFKAWLKTRGYANWTTTFATPPTPQPPT
Ga0316363_101344412	3300030659	Peatlands Soil	MANRADKVTFDPKPIRLGVAWGLVARHALSGQQEHIVGFHSETEAKEWLAGKGCKAWLKTRGYLN
Ga0311301_1002417717	3300032160	Peatlands Soil	MANPADQVTFNPKPILVGAAWALVATHALSGQREQVIGFHSETEAKEWLASKGCKAWLKTRGYANWITTFATPPTPQSPT
Ga0311301_100282997	3300032160	Peatlands Soil	MANPADNVTFNPKPILVGVAWALVATHALSGQQEQVIGFHSEAEAKEWLASKGCKAWLKTRGYANWTTTFATPPTPQPPI
Ga0311301_118752251	3300032160	Peatlands Soil	MANIAEYTVTFDPKPIRIGVAWGLVATHALSGQQEHIVGFHTETEAKEWLASKGCKAWLRTRGYVN
Ga0311301_119897081	3300032160	Peatlands Soil	LANPPDKVTFDPKPIRLGVAWGLVARHALSGQQEHIVGFHSETEAKEWLAGKGCKAWLKTRGYLN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059580

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences