Metagenome / Metatranscriptome Family F059599

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F059599
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	56 residues
Representative Sequence	MHSTMMPPTEWDRELIADLAAERTGLGKSEVVGVRGLAAAHETRLLGDIAQVIPVA
Number of Associated Samples	84
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	36.72 %
% of genes near scaffold ends (potentially truncated)	93.98 %
% of genes from short scaffolds (< 2000 bps)	93.98 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (96.241 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (40.602 % of family members)
Environment Ontology (ENVO)	Unclassified (63.158 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.872 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF01850	PIN	0.75
PF00202	Aminotran_3	0.75
PF03992	ABM	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.24 %
Unclassified	root	N/A	3.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.24 %
Unclassified	root	N/A	3.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.24 %
Unclassified	root	N/A	3.76 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	96.24 %
Unclassified	root	N/A	3.76 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	22.56 %
Unclassified	root	N/A	3.76 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.27 %
Unclassified	root	N/A	3.76 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	7.52 %
Unclassified	root	N/A	3.76 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.75 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7.52 %
Unclassified	root	N/A	3.76 %
Rhodoblastus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus	0.75 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	3.76 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.75 %
Candidatus Rhodoblastus alkanivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → Candidatus Rhodoblastus alkanivorans	0.75 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.75 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1076202	All Organisms → cellular organisms → Bacteria → Proteobacteria	508	Open in IMG/M
3300000956\|JGI10216J12902_111638778	All Organisms → cellular organisms → Bacteria → Proteobacteria	785	Open in IMG/M
3300005331\|Ga0070670_100373808	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1255	Open in IMG/M
3300005332\|Ga0066388_101481851	All Organisms → cellular organisms → Bacteria → Proteobacteria	1185	Open in IMG/M
3300005332\|Ga0066388_107167675	All Organisms → cellular organisms → Bacteria → Proteobacteria	560	Open in IMG/M
3300005332\|Ga0066388_108258475	All Organisms → cellular organisms → Bacteria → Proteobacteria	519	Open in IMG/M
3300005467\|Ga0070706_100951651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	793	Open in IMG/M
3300005555\|Ga0066692_10281548	All Organisms → cellular organisms → Bacteria → Proteobacteria	1053	Open in IMG/M
3300005764\|Ga0066903_100682065	All Organisms → cellular organisms → Bacteria → Proteobacteria	1806	Open in IMG/M
3300005764\|Ga0066903_100740365	All Organisms → cellular organisms → Bacteria → Proteobacteria	1743	Open in IMG/M
3300005764\|Ga0066903_102018431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1108	Open in IMG/M
3300005764\|Ga0066903_103365287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	863	Open in IMG/M
3300005764\|Ga0066903_104090175	All Organisms → cellular organisms → Bacteria → Proteobacteria	781	Open in IMG/M
3300005764\|Ga0066903_106469497	All Organisms → cellular organisms → Bacteria → Proteobacteria	611	Open in IMG/M
3300005764\|Ga0066903_106514660	All Organisms → cellular organisms → Bacteria → Proteobacteria	608	Open in IMG/M
3300005764\|Ga0066903_106797266	All Organisms → cellular organisms → Bacteria → Proteobacteria	594	Open in IMG/M
3300005764\|Ga0066903_107300967	All Organisms → cellular organisms → Bacteria → Proteobacteria	571	Open in IMG/M
3300005764\|Ga0066903_107460785	All Organisms → cellular organisms → Bacteria → Proteobacteria	564	Open in IMG/M
3300009137\|Ga0066709_103550936	All Organisms → cellular organisms → Bacteria → Proteobacteria	566	Open in IMG/M
3300009792\|Ga0126374_11027914	All Organisms → cellular organisms → Bacteria → Proteobacteria	648	Open in IMG/M
3300010043\|Ga0126380_10935127	All Organisms → cellular organisms → Bacteria → Proteobacteria	724	Open in IMG/M
3300010046\|Ga0126384_11679135	All Organisms → cellular organisms → Bacteria → Proteobacteria	600	Open in IMG/M
3300010046\|Ga0126384_12473336	All Organisms → cellular organisms → Bacteria → Proteobacteria	504	Open in IMG/M
3300010360\|Ga0126372_11772601	All Organisms → cellular organisms → Bacteria → Proteobacteria	660	Open in IMG/M
3300010362\|Ga0126377_11314475	All Organisms → cellular organisms → Bacteria → Proteobacteria	795	Open in IMG/M
3300010366\|Ga0126379_10201001	All Organisms → cellular organisms → Bacteria → Proteobacteria	1917	Open in IMG/M
3300010366\|Ga0126379_12223008	All Organisms → cellular organisms → Bacteria → Proteobacteria	649	Open in IMG/M
3300010376\|Ga0126381_104858295	All Organisms → cellular organisms → Bacteria → Proteobacteria	516	Open in IMG/M
3300010398\|Ga0126383_11964982	All Organisms → cellular organisms → Bacteria → Proteobacteria	673	Open in IMG/M
3300010398\|Ga0126383_12116885	All Organisms → cellular organisms → Bacteria → Proteobacteria	649	Open in IMG/M
3300010868\|Ga0124844_1084268	All Organisms → cellular organisms → Bacteria → Proteobacteria	1193	Open in IMG/M
3300010868\|Ga0124844_1186762	All Organisms → cellular organisms → Bacteria → Proteobacteria	765	Open in IMG/M
3300011269\|Ga0137392_10401014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → Candidatus Rhodoblastus alkanivorans	1138	Open in IMG/M
3300011271\|Ga0137393_10111226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2248	Open in IMG/M
3300012202\|Ga0137363_11315093	All Organisms → cellular organisms → Bacteria → Proteobacteria	611	Open in IMG/M
3300012207\|Ga0137381_11547085	All Organisms → cellular organisms → Bacteria → Proteobacteria	555	Open in IMG/M
3300012209\|Ga0137379_11740420	All Organisms → cellular organisms → Bacteria → Proteobacteria	519	Open in IMG/M
3300012211\|Ga0137377_10721733	All Organisms → cellular organisms → Bacteria → Proteobacteria	931	Open in IMG/M
3300012356\|Ga0137371_11091763	All Organisms → cellular organisms → Bacteria → Proteobacteria	600	Open in IMG/M
3300012923\|Ga0137359_10938428	All Organisms → cellular organisms → Bacteria → Proteobacteria	745	Open in IMG/M
3300012923\|Ga0137359_11644732	All Organisms → cellular organisms → Bacteria → Proteobacteria	530	Open in IMG/M
3300012948\|Ga0126375_11131590	All Organisms → cellular organisms → Bacteria → Proteobacteria	647	Open in IMG/M
3300012971\|Ga0126369_11143413	All Organisms → cellular organisms → Bacteria → Proteobacteria	868	Open in IMG/M
3300012971\|Ga0126369_11805688	All Organisms → cellular organisms → Bacteria → Proteobacteria	700	Open in IMG/M
3300016270\|Ga0182036_10630480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	862	Open in IMG/M
3300016270\|Ga0182036_11181372	All Organisms → cellular organisms → Bacteria → Proteobacteria	636	Open in IMG/M
3300016270\|Ga0182036_11836589	All Organisms → cellular organisms → Bacteria → Proteobacteria	513	Open in IMG/M
3300016294\|Ga0182041_10049946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2823	Open in IMG/M
3300016294\|Ga0182041_10226566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1507	Open in IMG/M
3300016294\|Ga0182041_11258827	All Organisms → cellular organisms → Bacteria → Proteobacteria	676	Open in IMG/M
3300016341\|Ga0182035_10224251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1502	Open in IMG/M
3300016341\|Ga0182035_10912226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	775	Open in IMG/M
3300016357\|Ga0182032_10275175	All Organisms → cellular organisms → Bacteria → Proteobacteria	1319	Open in IMG/M
3300016357\|Ga0182032_10609727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	909	Open in IMG/M
3300016371\|Ga0182034_10522133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	993	Open in IMG/M
3300016371\|Ga0182034_11625181	All Organisms → cellular organisms → Bacteria → Proteobacteria	568	Open in IMG/M
3300016387\|Ga0182040_10147624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1671	Open in IMG/M
3300016404\|Ga0182037_11042831	All Organisms → cellular organisms → Bacteria → Proteobacteria	714	Open in IMG/M
3300016404\|Ga0182037_11985058	All Organisms → cellular organisms → Bacteria → Proteobacteria	522	Open in IMG/M
3300016422\|Ga0182039_12039651	All Organisms → cellular organisms → Bacteria → Proteobacteria	528	Open in IMG/M
3300016445\|Ga0182038_10873983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	791	Open in IMG/M
3300016445\|Ga0182038_11483850	All Organisms → cellular organisms → Bacteria → Proteobacteria	608	Open in IMG/M
3300016445\|Ga0182038_11968594	All Organisms → cellular organisms → Bacteria → Proteobacteria	529	Open in IMG/M
3300021377\|Ga0213874_10226003	All Organisms → cellular organisms → Bacteria → Proteobacteria	682	Open in IMG/M
3300021476\|Ga0187846_10476537	All Organisms → cellular organisms → Bacteria → Proteobacteria	511	Open in IMG/M
3300025910\|Ga0207684_10342009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1288	Open in IMG/M
3300029636\|Ga0222749_10477222	All Organisms → cellular organisms → Bacteria → Proteobacteria	672	Open in IMG/M
3300031474\|Ga0170818_113567130	All Organisms → cellular organisms → Bacteria → Proteobacteria	533	Open in IMG/M
3300031549\|Ga0318571_10032914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1454	Open in IMG/M
3300031549\|Ga0318571_10451668	All Organisms → cellular organisms → Bacteria → Proteobacteria	510	Open in IMG/M
3300031564\|Ga0318573_10065871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1801	Open in IMG/M
3300031564\|Ga0318573_10764390	All Organisms → cellular organisms → Bacteria → Proteobacteria	519	Open in IMG/M
3300031680\|Ga0318574_10642311	All Organisms → cellular organisms → Bacteria → Proteobacteria	622	Open in IMG/M
3300031682\|Ga0318560_10173375	All Organisms → cellular organisms → Bacteria → Proteobacteria	1147	Open in IMG/M
3300031682\|Ga0318560_10527469	All Organisms → cellular organisms → Bacteria → Proteobacteria	640	Open in IMG/M
3300031719\|Ga0306917_10406508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1063	Open in IMG/M
3300031719\|Ga0306917_10676159	All Organisms → cellular organisms → Bacteria → Proteobacteria	811	Open in IMG/M
3300031719\|Ga0306917_11033166	All Organisms → cellular organisms → Bacteria → Proteobacteria	641	Open in IMG/M
3300031723\|Ga0318493_10175526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1121	Open in IMG/M
3300031723\|Ga0318493_10504608	All Organisms → cellular organisms → Bacteria → Proteobacteria	669	Open in IMG/M
3300031724\|Ga0318500_10566602	All Organisms → cellular organisms → Bacteria → Proteobacteria	574	Open in IMG/M
3300031751\|Ga0318494_10736970	All Organisms → cellular organisms → Bacteria → Proteobacteria	577	Open in IMG/M
3300031751\|Ga0318494_10910327	All Organisms → cellular organisms → Bacteria → Proteobacteria	516	Open in IMG/M
3300031771\|Ga0318546_10638890	All Organisms → cellular organisms → Bacteria → Proteobacteria	749	Open in IMG/M
3300031782\|Ga0318552_10349701	All Organisms → cellular organisms → Bacteria → Proteobacteria	753	Open in IMG/M
3300031793\|Ga0318548_10329146	All Organisms → cellular organisms → Bacteria → Proteobacteria	750	Open in IMG/M
3300031793\|Ga0318548_10426825	All Organisms → cellular organisms → Bacteria → Proteobacteria	649	Open in IMG/M
3300031797\|Ga0318550_10141804	All Organisms → cellular organisms → Bacteria → Proteobacteria	1152	Open in IMG/M
3300031798\|Ga0318523_10173916	All Organisms → cellular organisms → Bacteria → Proteobacteria	1074	Open in IMG/M
3300031798\|Ga0318523_10305465	All Organisms → cellular organisms → Bacteria → Proteobacteria	794	Open in IMG/M
3300031805\|Ga0318497_10152789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1264	Open in IMG/M
3300031819\|Ga0318568_10915969	All Organisms → cellular organisms → Bacteria → Proteobacteria	542	Open in IMG/M
3300031821\|Ga0318567_10521101	All Organisms → cellular organisms → Bacteria → Proteobacteria	675	Open in IMG/M
3300031833\|Ga0310917_10892818	All Organisms → cellular organisms → Bacteria → Proteobacteria	598	Open in IMG/M
3300031835\|Ga0318517_10569449	All Organisms → cellular organisms → Bacteria → Proteobacteria	509	Open in IMG/M
3300031846\|Ga0318512_10039384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2067	Open in IMG/M
3300031859\|Ga0318527_10533287	All Organisms → cellular organisms → Bacteria → Proteobacteria	501	Open in IMG/M
3300031896\|Ga0318551_10295406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	911	Open in IMG/M
3300031910\|Ga0306923_11927280	All Organisms → cellular organisms → Bacteria → Proteobacteria	602	Open in IMG/M
3300031912\|Ga0306921_11680592	All Organisms → cellular organisms → Bacteria → Proteobacteria	687	Open in IMG/M
3300031942\|Ga0310916_10254266	All Organisms → cellular organisms → Bacteria → Proteobacteria	1481	Open in IMG/M
3300031942\|Ga0310916_10827769	All Organisms → cellular organisms → Bacteria → Proteobacteria	778	Open in IMG/M
3300031942\|Ga0310916_11326129	All Organisms → cellular organisms → Bacteria → Proteobacteria	591	Open in IMG/M
3300031942\|Ga0310916_11460383	All Organisms → cellular organisms → Bacteria → Proteobacteria	558	Open in IMG/M
3300031945\|Ga0310913_10823747	All Organisms → cellular organisms → Bacteria → Proteobacteria	654	Open in IMG/M
3300031946\|Ga0310910_11172539	All Organisms → cellular organisms → Bacteria → Proteobacteria	596	Open in IMG/M
3300031947\|Ga0310909_11136813	All Organisms → cellular organisms → Bacteria → Proteobacteria	633	Open in IMG/M
3300031947\|Ga0310909_11367274	All Organisms → cellular organisms → Bacteria → Proteobacteria	567	Open in IMG/M
3300031954\|Ga0306926_12192801	All Organisms → cellular organisms → Bacteria → Proteobacteria	615	Open in IMG/M
3300031981\|Ga0318531_10115718	All Organisms → cellular organisms → Bacteria → Proteobacteria	1188	Open in IMG/M
3300031981\|Ga0318531_10138696	All Organisms → cellular organisms → Bacteria → Proteobacteria	1086	Open in IMG/M
3300032025\|Ga0318507_10362829	All Organisms → cellular organisms → Bacteria → Proteobacteria	631	Open in IMG/M
3300032025\|Ga0318507_10434534	All Organisms → cellular organisms → Bacteria → Proteobacteria	571	Open in IMG/M
3300032043\|Ga0318556_10096138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1495	Open in IMG/M
3300032054\|Ga0318570_10038977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1927	Open in IMG/M
3300032055\|Ga0318575_10314801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	792	Open in IMG/M
3300032059\|Ga0318533_11027003	All Organisms → cellular organisms → Bacteria → Proteobacteria	604	Open in IMG/M
3300032060\|Ga0318505_10094757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1345	Open in IMG/M
3300032060\|Ga0318505_10600380	All Organisms → cellular organisms → Bacteria → Proteobacteria	517	Open in IMG/M
3300032066\|Ga0318514_10674827	All Organisms → cellular organisms → Bacteria → Proteobacteria	550	Open in IMG/M
3300032076\|Ga0306924_10346243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1704	Open in IMG/M
3300032076\|Ga0306924_11411777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	742	Open in IMG/M
3300032089\|Ga0318525_10607531	All Organisms → cellular organisms → Bacteria → Proteobacteria	558	Open in IMG/M
3300032091\|Ga0318577_10449614	All Organisms → cellular organisms → Bacteria → Proteobacteria	615	Open in IMG/M
3300032261\|Ga0306920_102192243	All Organisms → cellular organisms → Bacteria → Proteobacteria	768	Open in IMG/M
3300032261\|Ga0306920_102667802	All Organisms → cellular organisms → Bacteria → Proteobacteria	683	Open in IMG/M
3300033289\|Ga0310914_10205944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1757	Open in IMG/M
3300033289\|Ga0310914_11090368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	699	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.50%
Host-Associated	Host-Associated	1.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.50%
Plants	Host-Associated → Plants	1.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.74%
Cave	Environmental → Terrestrial → Cave	0.75%
Roots	Host-Associated → Plants → Roots	0.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.96%
Loam	Environmental → Terrestrial → Soil → Loam	12.78%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.75%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	65.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.29%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.28%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.50%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	40.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.28%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.53%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.75%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.75%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.75%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10762022	3300000580	Forest Soil	MMPAAEWDRELIADLAAERTGLREPEMMGVRGLAAAQQTRLLGDVAKVLPIAIATWRSD
JGI10216J12902_1116387781	3300000956	Soil	MHRTMVPATEWDRELIADLAAKGTGLRESEMVGVRGFAAAHEARLLGDIAKVL
Ga0070670_1003738081	3300005331	Switchgrass Rhizosphere	MMNATERDRELIAGLAPERPWLGKAQMVRVRRLTATDEAGLLGDVAKVLPVAMPPHCDDR
Ga0066388_1014818511	3300005332	Tropical Forest Soil	MHRPVMPSTEWDREFIADLAAERTGLREPEMVGVGGLAAAHETRLLGDIAQVL
Ga0066388_1071676751	3300005332	Tropical Forest Soil	MRRSVMPAAQRDRELIANLAAERAGLGESEVVGVRGLAAAHETCLLGDVAQVLPVAIATRGGD
Ga0066388_1082584751	3300005332	Tropical Forest Soil	MHRAMMPAAEWDRELIADLAAERARLSKSEVVGVRGLAAAQETRLLGDIA
Ga0070706_1009516511	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MHQPMMDATEWDRELIADLAAERTGLGKTEMMGIGGLAAADEARLLHDIAQVLSVAIAPR
Ga0066692_102815481	3300005555	Soil	MMPATEWDRELIADFAAKCAGLGESEMVGIGGLAAADEARLLHDIAQVLSVAI
Ga0066903_1006820651	3300005764	Tropical Forest Soil	MQRPVMPSTERDRELITDLAAERAWLGKSEVMGVRRLAAAHETRLLGDVAQVLPVAIAAR
Ga0066903_1007403651	3300005764	Tropical Forest Soil	MMPATQWDRELITDLAAERTGLREPEMMGVRGLAAAHETRLLGD
Ga0066903_1020184312	3300005764	Tropical Forest Soil	MHRAVMSAAERDRKLIADLAAERTGLSESEVVWVRGLAAAHETRLLGDVAK
Ga0066903_1033652872	3300005764	Tropical Forest Soil	MRRSVMPAAQWDRELIADLAAERAGLGESEVVRVRGLAAAHETCLLGDVAQVLPVAIATRGGDRED
Ga0066903_1040901751	3300005764	Tropical Forest Soil	MPATERDGELITDLATEGTGLREPEMVGVAGLAAAHETRLLGDIAQVLPVAIAPW
Ga0066903_1064694971	3300005764	Tropical Forest Soil	MHRTMMPATEWDCELIADFAAERTGLGKTEVMRVRGLAAADEACLPSDIAQVLPIAIPTRYSNRKDTLVD
Ga0066903_1065146602	3300005764	Tropical Forest Soil	MMAAAEWDRELIADLTAERTGLGETEMVGVRGLAAADKTRLLGDIAQVLPVA
Ga0066903_1067972661	3300005764	Tropical Forest Soil	MMPAAEWDRKLIADLAAKRAGLGKSEVVRIRGLAATHETCLLGD
Ga0066903_1073009671	3300005764	Tropical Forest Soil	MHRAMMSATEWDRELIADLAAERAGLRKSEMVGIGGLAAADEARLLHDIAQVLSVAIAPRGSER
Ga0066903_1074607852	3300005764	Tropical Forest Soil	MHRAVMSATEWDRELIADLAAERARLRESEVVRVRGLAAAHETRLL
Ga0066709_1035509361	3300009137	Grasslands Soil	MHRTMMPATEGDREFVADLAAERTGLGESEVVGVRGLAAAHETRLLGDIAQMLPVAIAARVRMLLSMRFA*
Ga0126374_110279141	3300009792	Tropical Forest Soil	MGAMHRTMMPATKRDRELIADLAAERARLSKSEVVRIGRLAAAHQTRLLGDVAKVLPVAIATRRS
Ga0126380_109351271	3300010043	Tropical Forest Soil	MHCTMMPATEWDREFIADLAAEGTGLREPEVVGISRLAAAQEARLLGNIAQVLPAAITTRHSDRE
Ga0126384_116791351	3300010046	Tropical Forest Soil	MHRTMMPTTERDCELITDLAAKRTGLGKSEVVRVRGLAAAHETCLLGDIAKVLPVAIAPRRRDCQHALI
Ga0126384_124733361	3300010046	Tropical Forest Soil	MRRAVMSATEWDRKLIADLAAERARLRESEVVGIRGLAAAHETRLLGDIAQMLP
Ga0126372_117726012	3300010360	Tropical Forest Soil	MMPATEWDRELIANLAAGTGLGEPKMMRVRGLAAAHETCLLGDVA
Ga0126377_113144752	3300010362	Tropical Forest Soil	MHRTMMPSTERHHEFIADLAAERARLGESEVVGIRRLAAAQQARLLCDVAQVRPVALAARRCDCEGAF
Ga0126379_102010012	3300010366	Tropical Forest Soil	MPATERDRELIADLAAECAGLGETEVVGVRGLAAAYETCLLGDIAQVLPVAIATRRRD
Ga0126379_122230081	3300010366	Tropical Forest Soil	MMPSAERDRELIADLAAERTGLREPEMVGVGGLAAAHETRLLGDIAQVLPVAIA
Ga0126381_1048582951	3300010376	Tropical Forest Soil	MQRTVMPSTEWDRKLIADLAAERTGLRKYEVAGVRGLAAAHETRLLGDIAKVLPVAIAPRRSD
Ga0126383_119649821	3300010398	Tropical Forest Soil	MHRTMMPATQWDRELIADLTAERTGLGKSEVVGVRGLAAAQQTRLLGDIAQVLPVAIAPRGGDR
Ga0126383_121168852	3300010398	Tropical Forest Soil	MMSATEWDRELIADLTAERAGLGKSEVVGVRGLATAQQTRLLGDIAQVL
Ga0124844_10842682	3300010868	Tropical Forest Soil	MMPATEWDRELITDLAAERTGLREPEMVGVGGLAAAYETRLLGDIAQV
Ga0124844_11867621	3300010868	Tropical Forest Soil	MMPATEWDRELITDLAAERTGLREPEMVGVGGLAAAHETRLLGDIAQV
Ga0137392_104010142	3300011269	Vadose Zone Soil	MHCTMMPATEWDRELIADLAAECTRLGKSEVVGVRGPAGADEARLLSD
Ga0137393_101112264	3300011271	Vadose Zone Soil	MMPAAEGDCELIADLAAERARLGESEVVGVRGLAAADEARLLGDIAQVLPVAIATRG
Ga0137363_113150931	3300012202	Vadose Zone Soil	MHRTMMPAAERDRELIADLAAKRTGLGKPEVVGIGGLTAAHETRLLGDVAQVLPVA
Ga0137381_115470851	3300012207	Vadose Zone Soil	MMPATEWDRELIADLAAERVWLSEPEVVRVGWLAAADEACLLGDVAQVPPVAIATGCSNLEDTL
Ga0137379_117404201	3300012209	Vadose Zone Soil	MHRTVMPATERDCELIADLAAKRAGLGESEVVGVRRLAAAQETCLLGDIAKVFPVAIAP
Ga0137377_107217332	3300012211	Vadose Zone Soil	MHRTVMPPTERDRELIADLAAERAGLGESEVVGIRRLAAAHETRLLGDIAQVLPVAIAT*
Ga0137371_110917632	3300012356	Vadose Zone Soil	MQRTMMPATERDCELIADLAAKRAGLGESEVVGVRRLAAAQETCLLGDVAKVFPVAI
Ga0137359_109384281	3300012923	Vadose Zone Soil	MAATEWDRELIADLAAESARLRESEVMGVRGLAAAHKTRLLGDITQMLPVA
Ga0137359_116447321	3300012923	Vadose Zone Soil	MHSTMMPATEWDRELIADLAAERTRLGETKVMGIRGLAAAHQTRLLGDLAQVLPVAI
Ga0126375_111315901	3300012948	Tropical Forest Soil	MLIVRPMHRTMMPSTERDRELIADLAAERSGLGESEVVGIGGLAAAHKARLLGDVAKM
Ga0126369_111434132	3300012971	Tropical Forest Soil	MHSTMMPAAEWDRELVADLAAKCAGLRETEVVGVRGLAAAHETRLLGDIAQMLPVAIA
Ga0126369_118056882	3300012971	Tropical Forest Soil	MPATEWDRELIADLAAECAGLGEAQVVGVRGLAAAHETCLLGDIAQVLP
Ga0182036_106304801	3300016270	Soil	MHGAMMSATEWDRELIADLAAERTGLGKSEMVWVRGLAAAHETRLLGDVAKVLPVAIA
Ga0182036_111813721	3300016270	Soil	MHRPVMPATERDRELIADLAAECAGLGEAQVVGIRGLAAAHETCLLGD
Ga0182036_118365892	3300016270	Soil	MHRTMMPATERDREFIADLAAERTGLGETEMVGVRGLAAAHETRLLGDVAKVL
Ga0182041_100499465	3300016294	Soil	MHRTMMPATEWDRELIADLAAKCAGLGESEMVGIGGLAAADEARLLHDIAQVLSVAIAPRGS
Ga0182041_102265661	3300016294	Soil	MMPATEWDCELIADLAAERTVLGESEVVGVRGLAATDEARLLHDIAK
Ga0182041_112588273	3300016294	Soil	MHQPMMDATEWDRELIADLAAERTGLGKTEMVGIGGLAAADEARLLHDIAQVLSVAIAPRGSE
Ga0182035_102242511	3300016341	Soil	MNRTVMSATEWDRELIADLAAEGTRLREPEVVGVRGPAATHETRLLGDIAKVLPVAIATRGGDR
Ga0182035_109122261	3300016341	Soil	MMPATEWDRELIADLAAKCAGLGESEMVGIGGLAAADEARLLHDIAQVLSVAIAPRGSE
Ga0182032_102751751	3300016357	Soil	MHRTMMPATERDRELIADLAAERTGLSEPEMMGVRGLAAADEARLLGDIAKVLP
Ga0182032_106097272	3300016357	Soil	MMPATEWDRELIADLAAERTWLRKSEMVGIGGLAAADEARLLHDIAQVL
Ga0182034_105221332	3300016371	Soil	MHRSVMPAAQWDRELIANLAAERAGLGESEVVRVRGLAAAHETCLLGD
Ga0182034_116251811	3300016371	Soil	LPPPPALVVGPMRRPMMPSTERDGELIADLAAQRTRLGKSEVVGVRGLAAAHETRLLGDI
Ga0182040_101476243	3300016387	Soil	MHRTVMPAAERDREFIADLAAEGTGLGKSEVVGIRRLAAAHETRLLGDIA
Ga0182037_110428311	3300016404	Soil	LPPPPALVVGAMRRPMMPSTERDRELITDLAAERTRLGKSEVVGIRWLAAAHETCLLGDIAQVLPVAIATR
Ga0182037_119850581	3300016404	Soil	MHQPMMDATEWDRELIADLAAERTGLGKTEMVGIGGLAAADEARLLHDIAQVLSVAIAPR
Ga0182039_120396511	3300016422	Soil	MHRAVMSATQGDRELIADLAAESAGLRESKVMGVGGLAAAQETRLLGDVAKVLPV
Ga0182038_108739831	3300016445	Soil	MHRTVMPAAERDREFIADLAAEGTGLGKSEVVGIRRLAAAHETRLLGDIAQVLPVAIAPRRSDR
Ga0182038_114838501	3300016445	Soil	MHRPMMPAAERDRELIADLAAERTGLGKSEVVGVRGLAAAHEARLLGDIAKVFPVTI
Ga0182038_119685941	3300016445	Soil	MHRPMMPPTERDRELIADLAAERTGLGETEVVGIRRLAAAHQTRLLGDVAK
Ga0213874_102260031	3300021377	Plant Roots	MHRPMMPAAKRDRELIADLAAERAGLRKTEVVGIRGLAAAYETRLLGDISQMLPIAV
Ga0187846_104765371	3300021476	Biofilm	MMPATEWDRELIADLAAECAGLGEAQVVGIRGLAATHETCLLGDIAQVLPVAIATRSRDRQLAAVG
Ga0207684_103420092	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MHSTMMPAAEWDRELVADLAAKCAGLRETEVVGVRGLAAADEARLLHDIAQVLSV
Ga0222749_104772221	3300029636	Soil	MHSTMMPAAEWDRELVADLAAKCAGLRETEVVGVRGLAAAHETRLLDDIAQMLPVAIAPR
Ga0170818_1135671302	3300031474	Forest Soil	MHRAVMPPTERDCELIADLAAKRTGLRESKVVRVRGAAAAQQTRLLGDVAKVLAVA
Ga0318571_100329143	3300031549	Soil	MMPATEWDRELIADLAAERAGLRKSEMVGIGGLAAADEARLLHDIAQVLSVAIAPRGG
Ga0318571_104516681	3300031549	Soil	MHRTMMPATERDRELIADLPAERTRLGKSEVVGVRGLAATHETRLLGDIAKVLPVAIAAW
Ga0318573_100658711	3300031564	Soil	MCRPVMPSTERDGELITDLAAEGTGLREPEMVGVGGLAAAHETRLLGDIAQVLPVAI
Ga0318573_107643901	3300031564	Soil	MHRTMVAATAWDRELIADLAAECAGLGKSEVVGVRGLAAAQETRLLGDVAKVLPVAIATRGSD
Ga0318542_105473281	3300031668	Soil	MHRSVMPAAQWDRELIANLAAERAGLGESEVVRVRGLAAAHETC
Ga0318574_106423112	3300031680	Soil	MHRAVMSATEWNRELIADLAAERTGLGKSEVVGVGGLAAAHQTRLLGDIVQVLSV
Ga0318560_101733753	3300031682	Soil	MMPSTERDRELITDLAAERTGLREPEMMGVRGLAAAHETRLLGDIAQVLPVAIAPRSRDC
Ga0318560_105274691	3300031682	Soil	MHRTVMPSTEWDRELIADLAAECAGLRESEVVEVRGLAAADEARLLGDIAQMLPVAIPT
Ga0306917_104065081	3300031719	Soil	MHRTMMPATEWDRELIADLAAERTGLRKSEVVGVRGLAAADEARLLGDI
Ga0306917_106761591	3300031719	Soil	MHRAVMSATEWDRELIADLAAERTRLRESEVVGVRGSAAADEARLLGDIPQVLPVAIATWSS
Ga0306917_110331662	3300031719	Soil	MMPATEWDRKLIADLAAERAGLGKSEVVGVRRLAAAHETCLLGDVAKVLPVAIAPRGC
Ga0318493_101755262	3300031723	Soil	MHGAMMSATEWDRELIADLAAERTGLGKSEMVWVRGLAAAHETRLLGGMSI
Ga0318493_105046081	3300031723	Soil	MPSTERDGELITDLAAEGTGLREPEMVGVGGLAAAHETRLLGDIAQVLPVAIAP
Ga0318500_105666022	3300031724	Soil	MHRTMMPAAEWDRELIADLAAERTGLGEPEMMGIRGLAAADEARLLGDIAK
Ga0306918_112454292	3300031744	Soil	MHRPMMPPTERDRELIADLAAERTGLGETEVVGIRRLAAAHQTRLL
Ga0318494_107369702	3300031751	Soil	MHRPMMPATERDRELITDLAAERTRLGKSEVVGIRWLAAAHETCLLGDIAQ
Ga0318494_109103271	3300031751	Soil	MMSATERDREFIADLAAERTGLGKSEVVWVRGLAAAHETRLLGDVAKVLPVTIATRRS
Ga0318546_106388902	3300031771	Soil	MHRTMMPATEWDRELIANLAAERSRLSKSKVVGVRRLAAAHETCLLGD
Ga0318552_103497011	3300031782	Soil	LPPPPALVVGAMRRPMMPSTERDRELITDLAAERTGLREPEMMGVRGLAAAHETRLLGDIAQVLPVAI
Ga0318548_103291462	3300031793	Soil	MHRTVMPSTEWDRELIADLAAECAGLRESEVVEVRGLAAADEARLLGDIAQMLPGASVRMLLSMPFA
Ga0318548_104268251	3300031793	Soil	MHRTMMPTTERDCELITDLAAKRTGLGKSEVVRVRGLAAAHETCLLGDIAQVLPVAITT
Ga0318550_101418043	3300031797	Soil	MMPSTERDRELITDLAAERTGLREPEMMGVRGLAAAHETRLLGDIAQV
Ga0318523_101739162	3300031798	Soil	MMPSTERDRELITDLAAERTGLREPEMMGVRGLAAAHETRLLGDIAQVLPVAIAPRSRDCEDA
Ga0318523_103054651	3300031798	Soil	MHRTVMPSTEWDRELIADLAAECAGLRESEVVEVRGLAAADEARLLGDIAQMLPVAIPTC
Ga0318497_101527892	3300031805	Soil	MMPATEWDRELIADLAAKCAGLGESEMVGIGGLAAADEARLLHD
Ga0318568_109159691	3300031819	Soil	MHRTMMPTTERDCELITDLAAKRTGLGKSEVVRVRGLAAAHETCLLGDI
Ga0318567_105211011	3300031821	Soil	MHRPVMPATERDRELIADLAAECAGLGEAQVVGIRGLAAAHETCLLGDMAQVL
Ga0310917_108928181	3300031833	Soil	LPPPPALVVGPMRRPMMPSTERDGELIADLAAQRTRLGKSEVVGVRGLAAADEACLLSDVAQVIP
Ga0318517_102152591	3300031835	Soil	MCRPVMPSTERDGELITDLAAEGTGLREPEMVGVGGLAAAHETRL
Ga0318517_105694491	3300031835	Soil	MMDATEWDRELIADLAAERTGLGKTEMVGIGGLAAADEARLLHDIAQVLS
Ga0318512_100393841	3300031846	Soil	MMAATERDRELIADLAAERAGLGKSEVVGVRGLAAAQQTCLLGDVAKVL
Ga0318527_105332871	3300031859	Soil	MHRTMMPATERDRELVADLAAERAGLCKSEVMRVRRFAAADEACLLSDVAQVLSVAIPARCGNREDALIDT
Ga0318551_102954061	3300031896	Soil	MHSTMMPPTEWDRELIADLAAERTGLGKSEVVGVRGLAAADEARLVGDIAQM
Ga0306923_119272802	3300031910	Soil	MHRAMMSTTEWDRELIADLAAERAGLRKSEMVGIGGLAAADEARLLHDIAQVLSVA
Ga0306921_116805921	3300031912	Soil	MMPAAEWDRELIADLAAERARLSKSEVVGVRGLAAAHETCLLGDIAQVLPVAIATWSSD
Ga0310916_102542661	3300031942	Soil	MHRAVMSATEWNRELIADLAAERTGLGKSEVVGVRGPAATHETRLLGDIAKVLPV
Ga0310916_108277692	3300031942	Soil	MMPATEWDRELIANLAAERSRLSKSKVVGVRRLAAAHETCLLGDIAQMLPVAIATWSGDREDA
Ga0310916_113261292	3300031942	Soil	MHRTMMPATERDRELIADLAAERTRLGKSEVVGVGRLAAAYQTRLLSDIA
Ga0310916_114603832	3300031942	Soil	MHGTMMPATEWDRELIADLAAERTRLRESEVVRVRGLAATHETCLLGDVAKVFPV
Ga0310913_108237471	3300031945	Soil	MHGAMMPATERDRELIADLAAERARLRESEVMRVRGLAAAQETRLLGDIAKVLPVAIATWGSDR
Ga0310910_111725391	3300031946	Soil	MHRAVMSATEGNGELIADLAAERTGLGETEVVRVRGLAAAQQTRLLGDIAQMLPVAIAPW
Ga0310909_111368131	3300031947	Soil	MHRPVMPATERDGELIADLAAECAGLGEAQVVGIRRLAAAYEACLLGDIAQVLPVAIATRRGD
Ga0310909_113672742	3300031947	Soil	MMDATEWDRELIADLAAERTGLGKTEMVGIGGLAAADEARLLHDIAQVLSVAIAPRG
Ga0306926_121928011	3300031954	Soil	MHRPVMPATERDRELIADLAAECARLGEAQVVGIRGLPAAHETCLLGDIAQVLPV
Ga0318531_101157181	3300031981	Soil	MMPSTERDRELITDLAAERTGLREPEMMGVRGLAAAHETRLLGDIAQVLPVAIAPRSRD
Ga0318531_101386961	3300031981	Soil	LPPPRALVARAMHRTMMPATERDRELIADLAAERTGLGKSEVVGVGGPAAAHETCLLGDV
Ga0318507_102148642	3300032025	Soil	MHGTMMPATEWDRELIADLAAERTRLRESEVVRVRGLAATHETCLL
Ga0318507_103628291	3300032025	Soil	MHRSVMPAAQWDRELIANLAAERAGLGESEVVRVRGLAAAHETCLLGDVAKVLPVAIAT
Ga0318507_104345342	3300032025	Soil	MMPATEWDCELIADLAAERTGLGESEVVGVRGLAATDEARLLHDIAK
Ga0318556_100961383	3300032043	Soil	MMPSTERDRELIADLAAKRTGLGKSEVVGIRWLAATHETRLLGDIAQVLSVAIATRGRDREDA
Ga0318570_100389773	3300032054	Soil	MHRAVMSATEWDRKLIAHLAAERAWLGKTEVVGVRGFAGADEARLLGYTTQVLPVAIAT
Ga0318575_103148012	3300032055	Soil	MHRTVMPAAERDREFIADLAAEGTGLGKSEVVGIRRLAAAHETRLLGDIAQ
Ga0318533_110270031	3300032059	Soil	MMPAAEWDRELIADPAAERTRLHETEVVRVRGPAAAQKARLLGDIAKVLA
Ga0318505_100947571	3300032060	Soil	MHSTMMPPTEWDRELIADLAAERTGLGKSEVVGVRGLAAAHETRLLGDIAQVIPVA
Ga0318505_106003801	3300032060	Soil	MHRAVMSATEWDRKLIAHLAAERAWLGKTEVVGVRGFAGADEARLLGYTTQV
Ga0318514_106748272	3300032066	Soil	MRRAVMPAAQWDRELIANLAAERAGLGESEVVRVRGLAAAHETCLLGDVAQVLPVA
Ga0306924_103462431	3300032076	Soil	MHRPVMPATERDRELIADLAAECAGLGEAQVVGIRGLAAAHETCLLGDMAQVLPV
Ga0306924_114117772	3300032076	Soil	MMPATERDRELIADLAAERTRLGKSEVVGVRGLAATHETRLLGNIPQVLP
Ga0306924_119384252	3300032076	Soil	MHRPVMPATERDRELIADLAAECARLGEAQVVGIRGLPAAHETCLLG
Ga0318525_106075311	3300032089	Soil	MHRAVMSATEWDREFIADLAAEGTGLRESEVVRVSRLAAAQETRLLGDVA
Ga0318577_104496141	3300032091	Soil	MMPATEWDCELIADLAAERTGLGESEVVGVRGLAATDEARLLHDIAKVLPA
Ga0306920_1021922431	3300032261	Soil	MHRTMMPATEWDRELIANLAAERSRLSKSKVVGVRRLAAAHETCLLGDIAQMLPVAIATW
Ga0306920_1026678022	3300032261	Soil	MDSTVVPTAEGDRELIADLAAERTRLGKSEVVGIRWLAAAHETRLLGDIAQVLPVAIATR
Ga0310914_102059444	3300033289	Soil	MHRTVMPAAERDREFIADLAAEGTGLGKSEVVGIRRLAAAHETRLLGDIAQMLPGAI
Ga0310914_110903681	3300033289	Soil	MHRTMMPATEWDRELIADLAAERTGLSKSEVVGVRGLAAAQQTRLLGDIAQMLPVAI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059599

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences