Metagenome Family F059791

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059791
Family Type	Metagenome
Number of Sequences	133
Average Sequence Length	104 residues
Representative Sequence	MSARKPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLALKEWQHQTEVWQHRAEVRFDKIEQRLASIEATLVEMPKTILKSVLEQLPKIIVQDVLAKLPKAVKKEIGFTPPA
Number of Associated Samples	99
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	13.89 %
% of genes near scaffold ends (potentially truncated)	22.56 %
% of genes from short scaffolds (< 2000 bps)	58.65 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (78.195 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (19.549 % of family members)
Environment Ontology (ENVO)	Unclassified (51.128 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (63.158 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 69.01% β-sheet: 0.00% Coil/Unstructured: 30.99%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF00512	HisKA	18.80
PF04055	Radical_SAM	5.26
PF08308	PEGA	1.50
PF02163	Peptidase_M50	0.75
PF08937	DUF1863	0.75
PF11008	DUF2846	0.75
PF14366	DUF4410	0.75
PF06078	DUF937	0.75
PF14602	Hexapep_2	0.75
PF14559	TPR_19	0.75
PF13365	Trypsin_2	0.75
PF12681	Glyoxalase_2	0.75
PF01761	DHQ_synthase	0.75
PF13517	FG-GAP_3	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG3753	Uncharacterized conserved protein YidB, DUF937 family	Function unknown [S]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.20 %
Unclassified	root	N/A	21.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.20 %
Unclassified	root	N/A	21.80 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.20 %
Unclassified	root	N/A	21.80 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	69.17 %
Unclassified	root	N/A	21.80 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	46.62 %
Unclassified	root	N/A	21.80 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	6.77 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.50 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.62 %
Unclassified	root	N/A	21.80 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	4.51 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.75 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.62 %
Unclassified	root	N/A	21.80 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	4.51 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.75 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.62 %
Unclassified	root	N/A	21.80 %
Pyrinomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas	3.01 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	1.50 %
unclassified Bryobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae	0.75 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.62 %
Unclassified	root	N/A	21.80 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	3.01 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1.50 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.75 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_110038580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300000891\|JGI10214J12806_10227117	All Organisms → cellular organisms → Bacteria	2877	Open in IMG/M
3300002090\|JGI24806J26614_1000660	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	11247	Open in IMG/M
3300002886\|JGI25612J43240_1010150	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1375	Open in IMG/M
3300004157\|Ga0062590_101258318	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	726	Open in IMG/M
3300005289\|Ga0065704_10092381	All Organisms → cellular organisms → Bacteria → Acidobacteria	2658	Open in IMG/M
3300005294\|Ga0065705_10132919	All Organisms → cellular organisms → Bacteria	2389	Open in IMG/M
3300005331\|Ga0070670_100142976	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2069	Open in IMG/M
3300005334\|Ga0068869_100063811	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2708	Open in IMG/M
3300005440\|Ga0070705_100067128	All Organisms → cellular organisms → Bacteria → Acidobacteria	2153	Open in IMG/M
3300005441\|Ga0070700_100196345	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1414	Open in IMG/M
3300005445\|Ga0070708_100047784	All Organisms → cellular organisms → Bacteria	3781	Open in IMG/M
3300005445\|Ga0070708_100904547	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	829	Open in IMG/M
3300005467\|Ga0070706_100084470	All Organisms → cellular organisms → Bacteria	2941	Open in IMG/M
3300005471\|Ga0070698_100171630	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2109	Open in IMG/M
3300005536\|Ga0070697_100000227	All Organisms → cellular organisms → Bacteria	46078	Open in IMG/M
3300005545\|Ga0070695_100889565	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	719	Open in IMG/M
3300005546\|Ga0070696_101675574	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300005559\|Ga0066700_10330674	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1076	Open in IMG/M
3300005564\|Ga0070664_100201365	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1777	Open in IMG/M
3300005618\|Ga0068864_101998308	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300005719\|Ga0068861_102160392	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300005841\|Ga0068863_101103033	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	798	Open in IMG/M
3300005844\|Ga0068862_101807948	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300007255\|Ga0099791_10073879	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1548	Open in IMG/M
3300009098\|Ga0105245_12963818	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300009148\|Ga0105243_11426003	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714	Open in IMG/M
3300009148\|Ga0105243_11796291	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644	Open in IMG/M
3300009174\|Ga0105241_11388536	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	672	Open in IMG/M
3300009176\|Ga0105242_11943689	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	629	Open in IMG/M
3300010396\|Ga0134126_10052493	All Organisms → cellular organisms → Bacteria	5099	Open in IMG/M
3300010399\|Ga0134127_11066716	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	871	Open in IMG/M
3300010399\|Ga0134127_12130701	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300010400\|Ga0134122_10265957	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1455	Open in IMG/M
3300010400\|Ga0134122_10432895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1171	Open in IMG/M
3300010401\|Ga0134121_10799825	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	906	Open in IMG/M
3300010403\|Ga0134123_10014019	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	5537	Open in IMG/M
3300011119\|Ga0105246_12242625	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300011270\|Ga0137391_10749168	Not Available	808	Open in IMG/M
3300011414\|Ga0137442_1002233	All Organisms → cellular organisms → Bacteria → Acidobacteria	2238	Open in IMG/M
3300011431\|Ga0137438_1085553	All Organisms → cellular organisms → Bacteria → Acidobacteria	954	Open in IMG/M
3300011438\|Ga0137451_1024234	All Organisms → cellular organisms → Bacteria → Acidobacteria	1753	Open in IMG/M
3300012042\|Ga0136627_1149305	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	776	Open in IMG/M
3300012093\|Ga0136632_10022936	All Organisms → cellular organisms → Bacteria → Acidobacteria	2788	Open in IMG/M
3300012203\|Ga0137399_11371378	Not Available	593	Open in IMG/M
3300012353\|Ga0137367_10024883	All Organisms → cellular organisms → Bacteria → Acidobacteria	4654	Open in IMG/M
3300012353\|Ga0137367_10886664	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300012354\|Ga0137366_10599233	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	790	Open in IMG/M
3300012355\|Ga0137369_10009243	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	9792	Open in IMG/M
3300012360\|Ga0137375_10928871	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300012685\|Ga0137397_10288086	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1224	Open in IMG/M
3300012685\|Ga0137397_10401781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1020	Open in IMG/M
3300012922\|Ga0137394_10209354	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1666	Open in IMG/M
3300012929\|Ga0137404_10178127	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1787	Open in IMG/M
3300012929\|Ga0137404_10266646	All Organisms → cellular organisms → Bacteria → Acidobacteria	1475	Open in IMG/M
3300012929\|Ga0137404_11337130	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	661	Open in IMG/M
3300012930\|Ga0137407_10035400	All Organisms → cellular organisms → Bacteria	3937	Open in IMG/M
3300012930\|Ga0137407_10102302	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2458	Open in IMG/M
3300012944\|Ga0137410_11707482	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300013100\|Ga0157373_10233456	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1299	Open in IMG/M
3300013297\|Ga0157378_10374016	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1397	Open in IMG/M
3300013297\|Ga0157378_11269902	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	777	Open in IMG/M
3300014326\|Ga0157380_13049551	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300014883\|Ga0180086_1000134	All Organisms → cellular organisms → Bacteria	9296	Open in IMG/M
3300014884\|Ga0180104_1003140	All Organisms → cellular organisms → Bacteria → Acidobacteria	3479	Open in IMG/M
3300015245\|Ga0137409_10930005	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300015264\|Ga0137403_10045989	All Organisms → cellular organisms → Bacteria	4524	Open in IMG/M
3300017695\|Ga0180121_10027862	All Organisms → cellular organisms → Bacteria → Acidobacteria	1994	Open in IMG/M
3300018000\|Ga0184604_10049730	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1154	Open in IMG/M
3300018000\|Ga0184604_10245309	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300018027\|Ga0184605_10016194	All Organisms → cellular organisms → Bacteria → Acidobacteria	2932	Open in IMG/M
3300018061\|Ga0184619_10035364	All Organisms → cellular organisms → Bacteria → Acidobacteria	2125	Open in IMG/M
3300018061\|Ga0184619_10272098	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	778	Open in IMG/M
3300018076\|Ga0184609_10288430	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	768	Open in IMG/M
3300018076\|Ga0184609_10371562	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300018429\|Ga0190272_10261306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1308	Open in IMG/M
3300018429\|Ga0190272_10477683	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1050	Open in IMG/M
3300018466\|Ga0190268_10383006	All Organisms → cellular organisms → Bacteria → Acidobacteria	895	Open in IMG/M
3300018469\|Ga0190270_10000112	All Organisms → cellular organisms → Bacteria	35279	Open in IMG/M
3300018469\|Ga0190270_11339462	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	760	Open in IMG/M
3300019377\|Ga0190264_11727206	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300019882\|Ga0193713_1108047	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	772	Open in IMG/M
3300019883\|Ga0193725_1002397	All Organisms → cellular organisms → Bacteria	5428	Open in IMG/M
3300019883\|Ga0193725_1085117	Not Available	764	Open in IMG/M
3300019883\|Ga0193725_1091558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300020060\|Ga0193717_1175948	Not Available	603	Open in IMG/M
3300021073\|Ga0210378_10038559	All Organisms → cellular organisms → Bacteria → Acidobacteria	1897	Open in IMG/M
3300021090\|Ga0210377_10052066	All Organisms → cellular organisms → Bacteria	2831	Open in IMG/M
3300025910\|Ga0207684_10093835	All Organisms → cellular organisms → Bacteria → Acidobacteria	2559	Open in IMG/M
3300025911\|Ga0207654_11324881	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300025925\|Ga0207650_10163588	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1764	Open in IMG/M
3300025934\|Ga0207686_10812488	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750	Open in IMG/M
3300025935\|Ga0207709_11474638	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300025942\|Ga0207689_10025498	All Organisms → cellular organisms → Bacteria → Acidobacteria	4955	Open in IMG/M
3300025942\|Ga0207689_10029479	All Organisms → cellular organisms → Bacteria → Acidobacteria	4582	Open in IMG/M
3300025945\|Ga0207679_10352635	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1283	Open in IMG/M
3300026035\|Ga0207703_11311396	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	696	Open in IMG/M
3300026089\|Ga0207648_10396282	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1250	Open in IMG/M
3300026095\|Ga0207676_10333335	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1397	Open in IMG/M
3300026116\|Ga0207674_11067383	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	777	Open in IMG/M
3300026118\|Ga0207675_101979460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300026285\|Ga0209438_1032982	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1719	Open in IMG/M
3300026497\|Ga0257164_1024840	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	873	Open in IMG/M
3300027748\|Ga0209689_1157405	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1075	Open in IMG/M
3300028380\|Ga0268265_10461552	All Organisms → cellular organisms → Bacteria → Acidobacteria	1189	Open in IMG/M
3300028828\|Ga0307312_10912767	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300031740\|Ga0307468_102057701	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300034155\|Ga0370498_067889	All Organisms → cellular organisms → Bacteria → Acidobacteria	806	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.94%
Host-Associated	Host-Associated	24.06%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.40%
Plants	Host-Associated → Plants	24.06%
Aquatic	Environmental → Aquatic	16.54%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.40%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.53%
Sediment	Environmental → Aquatic → Sediment	12.78%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.53%
Freshwater	Environmental → Aquatic → Freshwater	3.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.37%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	12.78%
Loam	Environmental → Terrestrial → Soil → Loam	11.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.53%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.77%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.01%
Ice	Environmental → Aquatic → Freshwater → Ice	2.26%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.10%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	12.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.77%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.01%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	2.26%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.50%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.75%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.75%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.75%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.53%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	9.02%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	6.02%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	6.02%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.26%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.01%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	2.26%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.75%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.75%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.75%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300002090	Soil microbial communities from Manhattan, Kansas, USA - Sample 200um MDA	Environmental	Open in IMG/M
3300002886	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011414	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT266_2	Environmental	Open in IMG/M
3300011431	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300012042	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ489 (22.06)	Environmental	Open in IMG/M
3300012093	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014883	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT760_16_10D	Environmental	Open in IMG/M
3300014884	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017695	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300034155	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1100385801	3300000559	Soil	MATRKPLARNNHLEEAMELLIRNQAAFVEQIXXXDQERLPLKEWQHRTEVWQHRAEERFDKIEQRLASIEATLVEMPKTILNSVLEQLPKIIVQDVLEKLPKAVKKEIGFKP*
JGI10214J12806_102271173	3300000891	Soil	MALLIRNQAAFVEQIARNDQESPAFKEWQHQTEVWQQKAEERFDRIEQRLASIEATFLEMPKTILKSVLEQLPKIIVQDVLAKLPKAVKKEIGFAPPA*
JGI24806J26614_10006605	3300002090	Soil	MAARKPLARNSHLEEAMALLIRNQASFVEQIARNDQERLALREWQHKTEVWQRRAEERFDKIEERLSNIEASLVQLPKTILRTILQQLPKAVKKEIGFTPPA*
JGI25612J43240_10101501	3300002886	Grasslands Soil	MSVRKPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLALKEWQHGAEVRFDKIEQRLASIEATLVEMPKTILKSVLEQLPKIIVQDVLAKLPKAVKKEIGFTPAA*
Ga0062590_1012583181	3300004157	Soil	MPAATVERTLARALESRRLKGRRGISFRVLELPGVSARKPLARNNHLEEAMELLIRNQAAFVEQIARNDQESPAFKEWQHQTEVWQQKAEERFDRIEQRLASIEATFLEMPKTILKSVLEQLPKIIVQDVLAKLPKAVKKEIG
Ga0066678_101934852	3300005181	Soil	MALLIRNQAAFVEQIARNDQERLALRVWQHKTEVWQHKTEEWQRKTEEWQRKAEERFDKIEERLSRIEASLVELPKTIIQTILDQIPKIREEIGFKSRA*
Ga0065704_100923813	3300005289	Switchgrass Rhizosphere	MSARKPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLALKEWQHRTEVWQHKAEERFDKIEQRLASIEATLLEMPNTILKSVLEQLPKIIVQDVLAKLPKAVKKEIGFTPPA*
Ga0065705_101329193	3300005294	Switchgrass Rhizosphere	VSARKPLARNNHLEEDMALLIRNQAAFVEQIARNDQERLALKEWQHRTEVWQHKAEERFDKIEQRLASIEATLLEMPNTILKSVLEQLPKIIVQDVLAKLPKAVKKEIGFTPPA*
Ga0070670_1001429762	3300005331	Switchgrass Rhizosphere	MALLIRNQAAFVEQIARNDQERLSLKEWQHGAEVRFDKIEQRLASIEATLLEMPKTILKSVLEQLPKIIVQDVLAKLPKAVKKEIGFTPAR*
Ga0068869_1000638113	3300005334	Miscanthus Rhizosphere	MSARKPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLSLKEWQHGAEVRFDKIEQRLASIEATLLEMPKTILKSLLEQLPKIIVQDVLAKLPKAVKKEIGFTPAR*
Ga0070705_1000671282	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MSARKPLARNNHLEEAMALLIRNQAAFVAQIARNDQERLALKEWQHQTEVWQHRAEVRFDKIEQRLASIEATLVDMPKTILKSVLEQLPKIIVQDVLAKLPKAVKKEIGFTPRA*
Ga0070705_1004269292	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MALLIRNQAAFVEQIARNDQERLKLQITGEHRQRKIEDWQRERAAWEREIEEWQRNALERFDKIEERLAKIETTLVDLPKALLQTIFDQIPKIRKELGFKPRS*
Ga0070705_1006569401	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MPARKPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLKLQIKSEDWQRKTEDWQRKTEDWQRKTEERLAAIEASLVELPKTILQTILDQIPKIRKEIGFKPRA*
Ga0070700_1001963452	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MSARKPLARSNHLEEAMALLIRNQAAFVEQIARNDQERLALKEWQHQTEVWQHGAEVRFDKIEQRLASIEATLLEMPKTILKSVLEQLPKIIVRDVLAKLPKAVKKEIGFTPPA*
Ga0070708_1000477843	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MALLIRNQAAFVEQIARNDQERLALQRQSDEWQRRTEEWQRKAERRFDRIEERLSRIEASLVQLPKTILLQLPKAVKQEIGFKSQR*
Ga0070708_1009045471	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MALLIRNQAAFVEQIARNDQERLALKEWQHQTEVWQHQTEVWQHRAEERFDKIEQRLASIEATLVDMPKTILKSVLEQLPKIIVQDVLAKLPKAVKKEIGFTPRA*
Ga0070706_1000844702	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSARKPLARNNHLEEAMALLIRNQAAFVAQIARNDQERLALKEWQHQTEVWQHRAEGRFDKIEQRLASIEATLVDMPKTILKSMLEQLPKIIVQDVLAKLPKAVKKEIGFTPPA*
Ga0070698_1001716301	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MALLIRNQAAFVAQIARNDQERLALKEWQHQTEVWQHRAEGRFDKIEQRLASIEATLVDMPKTILKSVLEQLPKIIVQDVLAKLPKAVKKEIGFTPPA*
Ga0070698_1003163292	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	LNMAARKPLARSNHLEEAMALLIRNQAAFVEQIARNDQERLALKEWQHRTEVWQRRTEDWQRKTEDWQRKAEERFDKIEERLAGIEASLVELPKTLLQTILDQIPKIRKEIGFKSPT*
Ga0070698_1006179102	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSARKPLARNNHLEEAMALLIRNQAAFVAQIARNDQERLARKEWQHQTEAWQHRAEVRVDKIEQRLASIEATLVDMPKTIL
Ga0070697_10000022735	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MSARKPLARNNHLEEAMALLIRNQAAFVAQIGRNDQERLALKEWQHQTDVWQHRAEVRFDKIEQRLASIEATLVDMPKTILKSVLEQLPKIIVQDVLAKLPKAVKKEIGFTPRA*
Ga0070695_1008895651	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MSARKPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLALKAWQHQTEVWQHRAEERFDKIEQRLASIEATLVEMPKTILKSVLEQLPKIIVQDVLAKLPKAVKKEIGFTPPA*
Ga0070696_1016755742	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	ARKPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLALKAWQHQTEVWQHRAEERFDKIEQRLASIEATLVEMPKTILKSVLEQLPKIIVQDVLAKLPKAVKKEIGFTPRA*
Ga0066700_103306741	3300005559	Soil	MALLIRNQAAFVEQIARNDQERLALRVWQHKTEKWQRKAEERFDKIEERLARIEASLIELPKNLLQTILDQMPKIRKEIGFTPL*
Ga0070664_1002013652	3300005564	Corn Rhizosphere	MALLIRNQAAFVEQIARNDQERLSLKEWQHGAEVRFDKIEQRLASIEATLLEMPKTILKSLLEQLPKIIVQDVLAKLPKAVKKEIGFTPAR*
Ga0068864_1019983081	3300005618	Switchgrass Rhizosphere	VLARKPLARNNHLEEDMALLIRNQAAFVEQIARNDQERLALKEWQPRTDVWQQKAEELFDKIEQRLASIEATLLEMPKTILKSVLEQLPKIIVQDVLAKLPKAVKKEIGFTPPA*
Ga0068861_1021603921	3300005719	Switchgrass Rhizosphere	ARQRNYRNNHLEEAMALLIRNQAAFVEQIARNDQERIKLQISSDARFRRIEEWQLKSEKRFDDIEKRLGKIEATLVELPKILLQTLLEQLPKAVKKEIGFKTRN*
Ga0068863_1011030332	3300005841	Switchgrass Rhizosphere	VSARKPLARNNHLEEDMALLIRNQAAFVEQIARNDQERLALKEWQHRTDVWQQKAEERFDKIEQRLASIEATLLEMPKTILKSVLEQLPKIIVQDVLAKLPKAVKK
Ga0068862_1018079482	3300005844	Switchgrass Rhizosphere	MSARKPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLSLKEWQHGAEVRFDKIEQRLASIEATLLEMPKTILKSLLEQL
Ga0066659_112827032	3300006797	Soil	LLIRNQAAFVEQIARNDQERLALRVWQHKTEKWQRKAEERFDKIEERLARIEASLIELPKNLLQTILDQMPKIRKEIGFTPP*
Ga0099791_100738792	3300007255	Vadose Zone Soil	MAARKPFARNNHLEEAMALLIRNQAAFVEQIARNDQERLALRVWQHKTEEWQRKAEERFDKIEERLSRIEASLVELPKTIIQTILDQIPKIREEIGFKSRA*
Ga0099794_106066892	3300007265	Vadose Zone Soil	MASRKPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLALKEWQHKTEVWQRQTEVWQHKTEDWQRKSEERFDKIEERLSRIEASLIELPKTIIQTILDQIPKIRKEIGFKSRA*
Ga0105245_129638182	3300009098	Miscanthus Rhizosphere	MSARKPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLSLKEWQHGAEVRFDKIEQRLASIEATLLEMPKTILKSLLEQLPKIIVQDVLAKLPKAVKKEIGFTPPA*
Ga0105243_114260032	3300009148	Miscanthus Rhizosphere	MALLIRNQAAFVEQIARNDQERLALKQWQHQTEIRFDQIEGRLAKIEETLAQLPQTILHSLLAQLPKAVKKEIGFSPPQAV*
Ga0105243_115892851	3300009148	Miscanthus Rhizosphere	MALLIRNQAAFVEQISRNDQERLALKDWQRKTEDWQRETEAWERKVEDWQRNALERFDKIEERLAKIETTLADLPKTLIQTILDQIPKIRKEIGFKPRA*
Ga0105243_117962912	3300009148	Miscanthus Rhizosphere	MSARKPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLALKEWQHQTEVWQHRAEVRFDKIEQRLASIEATLVEMPKTILKSVLEQLPKIIVQDVLAKLPKAVKKEIGFTPPA*
Ga0105241_113885362	3300009174	Corn Rhizosphere	EEAMALLIRNQAAFVEQIARNDQERLALKQWQHQTEIRFDQIEGRLAKIEETLAQLPQTILHSLLAQLPKAVKKEIGFSPPQAV*
Ga0105242_119436891	3300009176	Miscanthus Rhizosphere	NHLEEAMALLIRNQAAFVEQIARNDQERLALKAWQHQTEVWQHRAEERFDKIEQRLASIEATLVEMPKTILKSVLEQLPKIIVQDVLAKLPKAVKKEIGFTPPA*
Ga0134126_100524936	3300010396	Terrestrial Soil	MSARRPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLALKEWQHQTEVWQHQTEVWQHRAEERFDKIEQRLASIEATLVEMPKTILKTVLEQLPKIIVQDVLAKLPKAVKKEIGFTPPA*
Ga0134127_110667161	3300010399	Terrestrial Soil	MSARKPFARNNHLEEAMALLIRNQAAFVEQLARNDQERLAQKEWQHQIEVWRHQTEVWQHRAEERFDKIEQRLASIEATLLEMPKTILKSVLEQLPK
Ga0134127_121307011	3300010399	Terrestrial Soil	MVLLIRNQAAFVEQISRNDRQWLELRDWQHQTEIWQRAAEKRFDNIEQRLEKIEATLIEMPKTILAILLDQLPKAVKKEIGFRDRLLADHPKF*
Ga0134122_102659573	3300010400	Terrestrial Soil	MSARKPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLALKAWQHQTEVWQHRAEERFDKIEQRLASIEATLVEMPKIILKSVLEQLPKIIVQDVLAKLPKAVKKE
Ga0134122_104328952	3300010400	Terrestrial Soil	MATRRPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLDLKEWQRKAEARFEKIEQRLAQIEATLAEMPNTILQSVLQELPKIILKDILDKLPKALKKEIGFKPQPAR*
Ga0134121_107998252	3300010401	Terrestrial Soil	MSARKPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLALKAWQHQTEVWQHRAEERFDKIEQRLASIEATLVEMPKTILKSVLEQLPKIIVQDVLAKIPKAVKKEIGFTPPA*
Ga0134123_100140192	3300010403	Terrestrial Soil	MALLIRNQAAFVEQIARNDQERHALKDWQRQTEIWQHNTEEWQRKAEDRFDKIEQRLASIEATLVEMPKTILKSVLEQLPKIIVQDVLAKLPKAVKKEIGFKSPV*
Ga0105246_122426251	3300011119	Miscanthus Rhizosphere	MSARKPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLAQKEWQHQTEVWQHGAEVRFDKIEQRLASIEATLLEMPKTILKSVLEQLPKI
Ga0137391_107491682	3300011270	Vadose Zone Soil	MASTKPPTRNNYLQEAMALLISNQAAFVEQIARNDRERLALQRNAEEWQHKSDDQQRKNEERFDRIEARLASIEATLVQLPKTILQTVFDQLPKIKKEIGFKSPT*
Ga0137442_10022331	3300011414	Soil	MATRKPFARNNHLEEAMALLIRNQAAFVEQIARNDQERLALKVWQHQTEVWQHQTEVWQHRAEERFDKIEQRLASIEATLLEMPKTILKSVLEQLPKIIVEDVLAKLPKAVKKEIGFTPPA*
Ga0137438_10855532	3300011431	Soil	MVARKPLVRNNHLEEAMALLIRNQAAFVEQIARNDQERLALRVWQHKTEVWQHRTEEWQRKAEERFDKIEQRLSRIEESLVQLPKTILQSLLEQLPKIIVQ
Ga0137451_10242341	3300011438	Soil	MGARKPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLALRVWQHKTEVWQHRTEEWQRKAEERFDKIEQRLSRIEESLVQLPKTILQTVLDQLPKIIVQDVLEKLPKAVKKEIGFTSPT*
Ga0136627_11493051	3300012042	Polar Desert Sand	MTARKPIARNNHLEEAMALLIRNQAAFVEQIARNDQERLKLQRNAEDSQRQNEKRFDKIELRLSRIEASLVQLPKTILRTVLEQLPKAVKKEIGFKSPA*
Ga0136632_100229362	3300012093	Polar Desert Sand	MAARKPIARNNHLEEAMALLIRNQAAFVEQIARNDQERLRLQRNAEDSQRQNEKRFDKIELRLSRIEASLVQLPKTILRTVLEQLPKAVKKEIGFKSPA*
Ga0137382_104399642	3300012200	Vadose Zone Soil	MAARKPFARNNHLEEAMALLIRNQAAFVEQIARNDQERLALKEWQHRTEVWQRKTEDWQRKAEQRFDKIEERLAGIEASLVELPKNLLQTILDQIPKIRKEIGFTPPT*
Ga0137399_104988151	3300012203	Vadose Zone Soil	MAARKPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLKLQLTGDDRQRKIEDWQRETEDWERKIEDWQRNALERFDKIEERLAKIETTLVDLPKTLLQTILDQIPKIRKEIGFTPPT*
Ga0137399_112214922	3300012203	Vadose Zone Soil	SGRLSNMAARKPFARNNHLEEAMALLIRNQAAFVEQIARNDQERLALRVWQHKTEVWQHKTEEWQRKTEGWQRKAGERFDKIEERLSRIEASLVELPKTIIQTILDQIPKIRKEIGFKSRA*
Ga0137399_113713781	3300012203	Vadose Zone Soil	MASRKPPTRNNHLQEAMALLIHNQAAFVEQIARNDRERLTLQRSAEEWRHNSEEWQRKNEERFDRIEARLASIEENLVQLPKTILQTVFDQLPKIKKEIGLKSPA*
Ga0137370_110188981	3300012285	Vadose Zone Soil	MAARKPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLALKEWQHRTEVWQRKTEDWQRKAEQRFDKIEERLAGIEASLVELPKNLLQTILDQIPKIRKEIGFTPPT*
Ga0137367_100248834	3300012353	Vadose Zone Soil	MSARRPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLALKEWQHKTEVRFDKIEQRLSRIEESLVQLPKKILQSVLDQLPQIIVRDVLEQLPKAVKKEIGFTSPT*
Ga0137367_108866642	3300012353	Vadose Zone Soil	MAARRPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLKLQRQTYEWQLENREWQHKAETRLDKIEQRLARIEASLVQLPKTILAQLPKAV
Ga0137366_105992331	3300012354	Vadose Zone Soil	MAARRPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLKLQRQTYEWQLENREWQHKAETRLDKIEQRLARIEASLVQLPKTILAQLPKAVKKEIGFKSPA*
Ga0137369_100092434	3300012355	Vadose Zone Soil	MAARRPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLKLQRQTYERRIENREWQHKAETRFDKIEQRLARIEASLVQLPKTILAQLPKAVKKEIGFESSK*
Ga0137375_109288711	3300012360	Vadose Zone Soil	MAAGKPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLALKEWQHRTEVWQHKAEVRFDKIEQRLSKIEESLVQLPKKILQCVLDQRPQ
Ga0137397_100920354	3300012685	Vadose Zone Soil	MAARKPFARNNHLEEAMALLIRNQAAFVEQIARNDQERLALKEWQHKTEVWQHRTEDWQLKTEDWQRKAEERFDKIEERLSRIEASLVELP
Ga0137397_102880862	3300012685	Vadose Zone Soil	MPARPVARNNHLQEAMALLIRNQAAFVEQIARNDQERLALKEWQHKTEIWQRNAEIRFDKIEQRLANIEESLVQFQSVLDQLPKIIVRDVLDQLPKAVKKEIGFKTQR*
Ga0137397_104017811	3300012685	Vadose Zone Soil	MAARKPLPRNNHLEEAMALLIRNQAAFVEQIARTDQERLVLQRNAEEWQRKNEQRLSSIEASLVKLPKTILQTVLEQLPKIIVRDVLEKLPKAVKKEIGFTSPT*
Ga0137394_102093542	3300012922	Vadose Zone Soil	MAARKPLARNNHLEEAMALLIHNQAAFVEQIARNDQERLALKEWQHKTEVWQRKAEERFDKIEERLARIEASLLELPETILQSVLEPIVQAVLEQLPKAVKKEIGFTPPT*
Ga0137394_108269712	3300012922	Vadose Zone Soil	MAARKPFARNNHLEEAMALLIRNQAAFVEQIARNDQERLALKEWQHKTEVWQHRTEDWQLKTEDWQRKAEERFDKIEERLSRIEASLVELPKNILQT
Ga0137404_101781272	3300012929	Vadose Zone Soil	MAARKPLVRNNHLEEAMALLIRNQAAFVEQIARNDQERLALRVWQHKTEVWQHRTEEWQCKAEERFDKIEQRLSRIEESLVQLPKTMLQSVLDQLPKIIVQDVLEQLPKAVKKEIGFTSPT*
Ga0137404_102666463	3300012929	Vadose Zone Soil	PPARNNHLEEAMALLIRNQAAFIEQIARNDQERLALKQWQHQTEVWQRKAEERFDKIEQRLARIEESLIQIPKTILQQLPKAVKKEIGFKSPT*
Ga0137404_113371301	3300012929	Vadose Zone Soil	QLESLLARNNHLEEAIALLTRNRAAFVGQIARNDQERLALKEWQHQTDVWQHQTEVWQHRAEKRFDKIEQRLASIEATLVEMPKTILKSVLEQLPRIIVQDVLAKLPKAVKKEIGFTPPA
Ga0137407_100354006	3300012930	Vadose Zone Soil	MAARKPLVRNNHLEEAMALLIRNQAAFVEQIARNDQERLALRVWQHKTEVWQRKAEERFDKIEQRLSRIEESLIQLPKTILQSLLDQLPKAVKKEIGFTSPT*
Ga0137407_101023023	3300012930	Vadose Zone Soil	MAARKPLVRNNHLEEAMALLIRNQAAFVEQIARNDQERLALRVWQHRTEVWQHRTEEWQCKAEERFDKIEQRLSRIEESLVQLPKTILQTVLEQLPKIIVRDVLEQLPKAVKKEIGFTSPT*
Ga0137410_117074821	3300012944	Vadose Zone Soil	MAARKPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLALRVWQHKTEVWQHRTEEWQRKAEERFNKIEQRLSRIEDNLVQLPKTILQSVLDQLPKIIVQDVLEQLPKAVKKEIGFTPGT*
Ga0157373_102334562	3300013100	Corn Rhizosphere	MALLIRNQAAFVEQIVRNDQERLALKQWQHQTEIRFDQIEGRLAKIEETLAQLPQTILRSLLAQLPKAVKKEIGFSPPQAV*
Ga0157378_103740162	3300013297	Miscanthus Rhizosphere	MAARKPIARNNNHLEEAMALLIRNQAAFVEQISRNDRQWLELRDWRHQTEIWQRAAEKRFDNIEQRLEKIEATLIEMPKTILAILLDQLPKAVKKEIGFKGPSTR*
Ga0157378_112699022	3300013297	Miscanthus Rhizosphere	MATRRAPARHNHLEEAMALLIRNQAAFVEQIARNDQERLALKQWQHQTEIRFDQIEGRLAKIEETLAQLTQTILHSLLAQLPKAVKKEIGFSPPQAV*
Ga0120125_10423551	3300014056	Permafrost	MASRKPLARNNHLEEAMALLIRNRAAFVEQIARNDQERLALKEWQHKTEVWQHKTEEWQRKAEVRFDKIEERLSRIEASLVELPKNILQTILEQIPKIRKEIGFTPPT*
Ga0157380_130495511	3300014326	Switchgrass Rhizosphere	MSARKPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLALKEWQHGAEVRFDKIEQRLASIEATLLEMPKTILKSVLEQLPKIIVQDVLAKLPKAVKKEIGFTPAG*
Ga0180086_10001345	3300014883	Soil	MATRKPLSRNNHLEEAMALLIRNQAAYVEQIARNDQERLALKEWQRKTEEWQRKAEVRFDKIEQRLAKIEESLVQIPKTILQSLLEQLPKAVKKEIGFTSPT*
Ga0180104_10031404	3300014884	Soil	MATRKPFARNNHLEEALALLIRNQAAFVEQIARNDQERLALKEWQHQTEVWQHRAEGRFDKIEQRLASIESTLVDMPKIILKSVLEQLQKIIVQDVLAKLPKAVKKEIGFTPPA*
Ga0137409_109300052	3300015245	Vadose Zone Soil	VRNNHLEEAMALLIRNQAAFVEQIARNDQERLALKEWQHKTEVWQHKTEEWQRKAEVRFDQIEQRLSRIEESLVQLPKTILQSVLDQLPKIIVQDVLEQLPKAVKKEIGFTPGT*
Ga0137403_100459893	3300015264	Vadose Zone Soil	MAARKPLVRNNHLEEAMALLIRNQAAFIEQIARNDQERLALKQWQHQTEVWQRKAEERFDKIEQRLARIEESLIQIPKTILQQLPKAVKKEIGFKSPT*
Ga0180121_100278623	3300017695	Polar Desert Sand	MALLIRNQAAFVEQIARNDQERLALKEWQHKTEIWQRKAEERFENIERRLERIEASLIELPKIILKTVLEQLPKAVKKEIGFTPPA
Ga0184604_100497301	3300018000	Groundwater Sediment	MAARRPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLALRDWQYKTEVWQHKAEERFDKIEARLAMIEATLAEMPNIILKMLLEQLPKAVKKEIGFTSPPIR
Ga0184604_102453092	3300018000	Groundwater Sediment	MSARRSPARNNHLEEAMALLIRNQAAFVEQIARTDEERLALQRNAEEWQRKNERRFDRIEKRLASIEASLVQLPKTILLQLPKAVKKEIGFTSPT
Ga0184604_102846831	3300018000	Groundwater Sediment	MSARRPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLALRDWQHKTEVWQHKTHEWQRKTEDWQRKTEARLAKIETSLVE
Ga0184605_100053573	3300018027	Groundwater Sediment	MALLIRNQAAFVEQIARNDQERLALRDWQHKTEVWQHKTHEWQRKTEDWQRKTEARLAKIETSLVEMPKIILKAVLDQLPKAVKKEIGFKSPPAR
Ga0184605_100161943	3300018027	Groundwater Sediment	MALLISNQAAFVEQIARNDRERLALQRNAEEWQRKSDERQRKNEERFDRIEARLASIEENLVQLPKTILQTVFDQLPKIKKEIGFKTPT
Ga0184605_102980811	3300018027	Groundwater Sediment	TLLNMAARKPFARNNHLEEAMALLIRNQAAFVEQIARNDQERLKLQLTGDDRQRKIEDWQRETEDWERKIEDWQRNALERFDKIEERLSRIEASLVELPKNLLQTILDQMPKIRKEIGFTPPA
Ga0184619_100353645	3300018061	Groundwater Sediment	MTARRPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLKLQIKGEDWQRKTEEWQHKAEERFDKIEERLANIEVTLADMPGVILKAVLDQLPKALK
Ga0184619_102720981	3300018061	Groundwater Sediment	MAARKPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLGLERRTEKWQRRSEGRFDRIEQRLSSIEASLIQLPKTILQQLPKAVKKEIGFTPQT
Ga0184618_103226311	3300018071	Groundwater Sediment	MAARRPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLTLQIKSEDWQRKALERLDKIEERLANIEASLIQLPKTLLQTILDQIPKIRKEIG
Ga0184609_102884302	3300018076	Groundwater Sediment	SRLRSMATRKPFARNNHLEEAMALLIRNQAAFVEQIARNDQERLALKEWQHQTEVWQHQTEVWQHRAEERFDKIEQRLTSIEATLVEIPKTILKCVLEQLPKIIVQDVLAKLPKAVKKEIGFTPPA
Ga0184609_103715622	3300018076	Groundwater Sediment	MTKLFHMATRRPLARNNHLEEAMTLLIRNQAAFVDQVARNDQERLALREWQHNTERWQHQTEERLGKIEAALAEMPNTILQSVLQELPKIIIKDILDKLPKALKKEIGFKPQPAR
Ga0184633_100056323	3300018077	Groundwater Sediment	MALLIRNQAAFVEQIARNDQERLALKVWQHKTEVWQHNTEEWQRKTVEWQRKAEVRFDKIEQRLAKIEESLVQLPKTILQSLLEQLPKAVKKEIGFTSPA
Ga0190272_100230252	3300018429	Soil	MALLIRNQAAFVEQIARNDQERLKLQIKGEDWMRRTEEWQRKTEEWQRKAEDRFDKIEQRLANIEASLIQLPKTILQQLPKAVKKEIGFKTPT
Ga0190272_102613062	3300018429	Soil	MALLIRNQAAFVEQIARNDQERLALKEWQQKTEAWQRKTEEWQRKAEDRFDKIEQRLANIEASLIQLPKTILQQLPKAVKKEIGFKTRT
Ga0190272_103224672	3300018429	Soil	MALLIRNQAAFVEQISRNDQERLKLQISGEERQREIEDWQRNAVVRFDKIEERLANIETTLAELPKTLLQTILDQIPKIRKEIGFKPRA
Ga0190272_104776832	3300018429	Soil	MPCKNSGKSSECCWIACCGRTAFQDGRLLNMAARRPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLKLQIKGDDWMRRTEEWQRKAEDRFDKIEQRLANIEASLIQLPKTILQQLPKAVKKEIGFKTRT
Ga0190268_103830061	3300018466	Soil	ARRPLARNNHLEEAMALLIRNQAAFVEQIARTDQERLEFRDWRRKTEEWQRKAEERFDRIEARLANIEASLIQLPKTILQQLPKAVKKEIGFKTP
Ga0190270_100001124	3300018469	Soil	MALLIRNQAAFVEQIARNDQERLALKEWQQRTEAWQRKTEEWQRKAEDRFDKIEQRLANIEASLIQLPKTILQQLPKAVKKEIGFKT
Ga0190270_113394621	3300018469	Soil	ARNNHLEEAMALLIRNQAAFVEQIARNDQERLKLQITSADWQQQTKIWQHNTEVWQHNTEVWQRKAEERFDKIEQRLASIEATLVEMPKTILKNVLEQLPKIIVQDVLAKLPKAVKKEIGFTPPA
Ga0190270_119173001	3300018469	Soil	MAARKPLKRNNHLEEAMALLIRNQAAFVEQIARNDQERLKLQLTSESRQLKTEDWQRKTEDWQRKAEERFEKIEARLSRIEASLVDLPKTLLQTILDQ
Ga0190273_108889661	3300018920	Soil	RKPMARNNHLEEAMALLIRNQAAFVEQIARNDQERLALRDWQHRTEVWQHHTEEWQRKTEEWQRRAEERFDGIEERLSNIEASLVQLPKTILQTILEQLPKAVKKEIGFTPPA
Ga0190273_110468202	3300018920	Soil	MAARRPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLALRDWQHKTEVWQHKTEEWQRKTEEWQRKAEERFDKIEATLAEMPNIILKMLLEQLPKAVKKEIGFTSPPTR
Ga0190264_117272061	3300019377	Soil	TWDIKVVTIRGSEPFKDDRLLSMAARKPIVRNNHLEEAMALLIRNQAAFVEQIARNDQERFGLRDWQHRTEVWQHNTEEWQRRAEERFDKIEERLSNIEATLVQLPKIILQTILEQLPKAVKREIGFIPPA
Ga0193713_11080473	3300019882	Soil	MSARKPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLALKEWQHQTEVWQHRAEVRLASIEATLVEMPKTILKSVLEQLPKIIVQDVLAKLPKALKKEIGFTSPA
Ga0193725_10023976	3300019883	Soil	MTLLIRNQAAFVEQIARNDQERLALKVWQHQTEVWQHKAEVRFDKIEQRLASIEATLVEMPKTILKSVLEQLPKIIVEDVLAKLPKAVKKEIGFTPPA
Ga0193725_10851171	3300019883	Soil	MALLIHNQAAFVEQLARNDQERLALKEWQHKTEVWQDRAEARFDKIEQRLASIEDVLAEMPKTILKSVIDQLPKIIVKDVLEQLPKAVKKEIGFKSRS
Ga0193725_10915581	3300019883	Soil	MALLIRNQAAFVEQIARNDQERLALKEWQQQTEIWQHRAEGRFDMIEQRLASIEATLVEIPKTILKSVLEQLPKIIVQDVLAKLPKAVKKEI
Ga0193717_11759482	3300020060	Soil	MALLIHNQAAFVEQIARNDQERLALREWQQKTEIWQQKTEERLANIEASLTQLPKTILQTILEQLPKAVKKEIGFKSRT
Ga0210378_100385592	3300021073	Groundwater Sediment	MAAGKPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLALKEWQHRTEVWQHKAEVRFDKIERRLARIEESLIQLPKKILQSVLDQLPQIIVRDVLEQLPKAVKKEIGFTLRPNL
Ga0210377_100520663	3300021090	Groundwater Sediment	MAARRPLARNNHLEEAMVLLIRNQAAFVEQIARNDQERLKLQRQTCEWQLENREWQHKAETRFDKIEQRLARIEASLVQLPKTILAQLPKAVKKEIGFKSSK
Ga0207684_100938352	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MALLIRNQAAFVAQIARNDQERLALKEWQHQTEVWQHRAEGRFDKIEQRLASIEATLVDMPKTILKSMLEQLPKIIVQDVLAKLPKAVKKEIGFTPPA
Ga0207654_113248811	3300025911	Corn Rhizosphere	MSARKPFARNNHLEEAMALLIRNQAAFVEQIARNDQERLAQKEWQHQIEVWRHQTEVWQHRAEERFDKIEQRLASIEATLLEMPKTILKSVLEQLPKIIVQDVLAKLPKAVK
Ga0207650_101635882	3300025925	Switchgrass Rhizosphere	MSARKPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLSLKEWQHGAEVRFDKIEQRLASIEATLLEMPKTILKSVLEQLPKIIVQDVLAKLPKAVKKEIGFTPAR
Ga0207686_108124882	3300025934	Miscanthus Rhizosphere	MATRKPLRRNNHLEEAMALLIRNQAAFVEQIARNDQERLALKAWQQQTEVWQHRALERFDKIEQRLASIEATLVQMPKTILKSVLEQLPKIIVQDVLAKLPKAVKKEIGFTPPA
Ga0207709_114746381	3300025935	Miscanthus Rhizosphere	MSARKPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLALKEWQHGAEVRFDKIEQRLASIEATLLEMPKTILKSVLEQLPKIIVQDVLAKLPKAVKKEIGFTPAG
Ga0207689_100254982	3300025942	Miscanthus Rhizosphere	MALLIRNQAAFVEQIARNDQERLALKEWQHGAEVRFDKIEQRLASIEATLLEMPKTILKSVLEQLPKIIVQDVLAKLPKAVKKEIGFTPPA
Ga0207689_100294793	3300025942	Miscanthus Rhizosphere	MALLIRNQAAFVEQIARNDQERLSLKEWQHGAEVRFDKIEQRLASIEATLLEMPKTILKSLLEQLPKIIVQDVLAKLPKAVKKEIGFTPAR
Ga0207679_103526352	3300025945	Corn Rhizosphere	MSARKPLARNNHLEEAMALLIRNQAAFVEQIARNDQERFSLKEWQHGAEVRFDKIEQRLASIEATLLEMPKTILKSLLEQLPKIIVQDVLAKLPKAVKKEIGFTPAR
Ga0207703_113113961	3300026035	Switchgrass Rhizosphere	APARHNHLEEAMALLIRNQAAFVEQIARNDQERLALKQWQHQTEIRFDQIEGRLAKIEETLAQLPQTILRSLLAQLPKAVKKEIGFSPPQAV
Ga0207648_103962821	3300026089	Miscanthus Rhizosphere	MSARKPFARKNHLEEAMALLIRNQAAFVEQIARNDQERLAQKEWQHQIEVWRHQTEVWQHRAEERFDKIEQRLASIEATLLEMPKTILKSVLEQLPKIIVQDVLAKLPKAVKKEIGFTPA
Ga0207676_103333352	3300026095	Switchgrass Rhizosphere	MSARKPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLSLKEWQHGAEVRFDKIEQRLASIEATLLEMPKTILKSLLEQLPKIIVQDVLAKLPKAVKKEIGFTPAR
Ga0207674_110673831	3300026116	Corn Rhizosphere	MSARKPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLSLKEWQHGAEVRFDKIEQRLASIEALCLKCRRPFFKSVLEQLPKIIVQDVLAKLPKAV
Ga0207675_1019794602	3300026118	Switchgrass Rhizosphere	PARQRNYRNNHLEEAMALLIRNQAAFVEQIARNDQERIKLQISSDARFRRIEEWQLKSEKRFDDIEKRLGKIEATLVELPKILLQTLLEQLPKAVKKEIGFKTRN
Ga0209438_10329822	3300026285	Grasslands Soil	MALLIRNQAAFVEQIARNDQERLALKEWQHGAEVRFDKIEQRLASIEATLVEMPKTILKSVLEQLPKIIVQDVLAKLPKAVKKEIGFTPAA
Ga0257164_10248402	3300026497	Soil	MAVRKPLVRNNHLEEAMALLIRNQAAFVEQIARNDQERLALRVWQHKTEVWQHRTEEWQRKAEERFDKIEQWLSRIEESLIQLPKTILQSVLAQLPKIIVQDVLEKLPKAVKKEIGFTSP
Ga0209689_11574052	3300027748	Soil	MALLIRNQAAFVEQIARNDQERLALRVWQHKTEKWQRKAEERFDKIEERLARIEASLIELPKNLLQTILDQMPKIRKEIGFTPL
Ga0268265_104615522	3300028380	Switchgrass Rhizosphere	MSARKPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLSLKEWQHGAEVRFDKIEQRLASIEATLLEMPKTILKSVLEQLPKIIVQDVLAKLPKAVKKEIGFTPPA
Ga0307312_109127671	3300028828	Soil	LEFARDDKLLHMATRRPLARNNHLEEAMALLIRNQAAFVEQVARNDHEHLAFREWQYNTERWQHQTEERLGKIEAALAEMRNTLEELPKIIIKDILDKLPKALKKEIGFKPQPAR
Ga0307468_1020577011	3300031740	Hardwood Forest Soil	RLPSMSARKPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLALKAWQHQTEVWQHRAEERFDKIEQRLASIEATLVQMPKTILKSVLEQLPKIIVQDVLAKLPKAVKKEIGFTPPA
Ga0370498_067889_406_804	3300034155	Untreated Peat Soil	LHRKEDANDWPCKKTGNSSGAAVGGDLWMKSFQDGRLLVMSARKPLARNNHLEEAMALLIRNQAAFVEQIARNDQERLALRVWQHKAEVRFDMIEQRLERIEASLIELPKIILKTVLEQLPKIIVQDVLAKLP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F059791

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences