Metagenome / Metatranscriptome Family F059926

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059926
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	61 residues
Representative Sequence	LDAGSNDDYNLHWGHRLLSHYLDEAGIAHEHRENPGNHGGRANERYQVALQWLSHVLERD
Number of Associated Samples	120
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.26 %
% of genes near scaffold ends (potentially truncated)	93.98 %
% of genes from short scaffolds (< 2000 bps)	89.47 %
Associated GOLD sequencing projects	118
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.729 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost (14.286 % of family members)
Environment Ontology (ENVO)	Unclassified (25.564 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.391 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.45% β-sheet: 0.00% Coil/Unstructured: 54.55%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF00561	Abhydrolase_1	15.04
PF07366	SnoaL	5.26
PF08386	Abhydrolase_4	4.51
PF12697	Abhydrolase_6	4.51
PF13026	DUF3887	2.26
PF00211	Guanylate_cyc	2.26
PF00196	GerE	1.50
PF13354	Beta-lactamase2	1.50
PF13360	PQQ_2	1.50
PF04909	Amidohydro_2	1.50
PF07883	Cupin_2	1.50
PF12893	Lumazine_bd_2	1.50
PF00756	Esterase	0.75
PF14542	Acetyltransf_CG	0.75
PF12680	SnoaL_2	0.75
PF00903	Glyoxalase	0.75
PF02885	Glycos_trans_3N	0.75
PF07992	Pyr_redox_2	0.75
PF08818	DUF1801	0.75
PF06912	DUF1275	0.75
PF13518	HTH_28	0.75
PF07715	Plug	0.75
PF14579	HHH_6	0.75
PF12146	Hydrolase_4	0.75
PF08031	BBE	0.75
PF05974	DUF892	0.75
PF03023	MurJ	0.75
PF16640	Big_3_5	0.75
PF01208	URO-D	0.75
PF01022	HTH_5	0.75
PF10012	DUF2255	0.75
PF08352	oligo_HPY	0.75
PF13649	Methyltransf_25	0.75
PF00753	Lactamase_B	0.75
PF02518	HATPase_c	0.75
PF08241	Methyltransf_11	0.75
PF05960	DUF885	0.75
PF13669	Glyoxalase_4	0.75
PF00126	HTH_1	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	2.26
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.75
COG0407	Uroporphyrinogen-III decarboxylase HemE	Coenzyme transport and metabolism [H]	0.75
COG0534	Na+-driven multidrug efflux pump, DinF/NorM/MATE family	Defense mechanisms [V]	0.75
COG0728	Lipid II flippase MurJ/MviN (peptidoglycan biosynthesis)	Cell wall/membrane/envelope biogenesis [M]	0.75
COG2244	Membrane protein involved in the export of O-antigen and teichoic acid	Cell wall/membrane/envelope biogenesis [M]	0.75
COG3619	Uncharacterized membrane protein YoaK, UPF0700 family	Function unknown [S]	0.75
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	0.75
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.75
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	0.75
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.75
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.48 %
Unclassified	root	N/A	7.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.73 %
Unclassified	root	N/A	7.52 %
Viruses	superkingdom	All Organisms → Viruses	0.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.73 %
Unclassified	root	N/A	7.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.75 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	53.38 %
Unclassified	root	N/A	7.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.76 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.26 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.75 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	15.79 %
Unclassified	root	N/A	7.52 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.01 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	2.26 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.75 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	12.78 %
Unclassified	root	N/A	7.52 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	3.01 %
Chlorobi	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi	1.50 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.75 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	9.02 %
Unclassified	root	N/A	7.52 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.01 %
Chlorobia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia	1.50 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.50 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.75 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.75 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.02 %
Unclassified	root	N/A	7.52 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.01 %
Chlorobiales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales	1.50 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.50 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.75 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.75 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.02 %
Unclassified	root	N/A	7.52 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.01 %
Chlorobiaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae	1.50 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.50 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.75 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.75 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.02 %
Unclassified	root	N/A	7.52 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.01 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.50 %
Chlorobium/Pelodictyon group	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae → Chlorobium/Pelodictyon group	0.75 %
Chlorobaculum	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae → Chlorobaculum	0.75 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.75 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.75 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.02 %
Unclassified	root	N/A	7.52 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.01 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.50 %
Chlorobium	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae → Chlorobium/Pelodictyon group → Chlorobium	0.75 %
Chlorobaculum limnaeum	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae → Chlorobaculum → Chlorobaculum limnaeum	0.75 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.75 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.75 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.02 %
Unclassified	root	N/A	7.52 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.01 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.50 %
Chlorobium limicola	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae → Chlorobium/Pelodictyon group → Chlorobium → Chlorobium limicola	0.75 %
Chlorobaculum limnaeum	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae → Chlorobaculum → Chlorobaculum limnaeum	0.75 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.75 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908032\|Perma_A_C_ConsensusfromContig111202	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300001334\|A2165W6_1350732	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300001535\|A3PFW1_10885378	All Organisms → cellular organisms → Bacteria	1279	Open in IMG/M
3300001538\|A10PFW1_10151037	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300002028\|A17_1072037	All Organisms → cellular organisms → Bacteria → Terrabacteria group	565	Open in IMG/M
3300004114\|Ga0062593_102431396	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300004152\|Ga0062386_100641506	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300004479\|Ga0062595_102432999	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300005178\|Ga0066688_10662765	All Organisms → cellular organisms → Bacteria → Terrabacteria group	667	Open in IMG/M
3300005180\|Ga0066685_10530516	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300005204\|Ga0068997_10043173	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300005334\|Ga0068869_100040116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3346	Open in IMG/M
3300005447\|Ga0066689_10866916	All Organisms → cellular organisms → Bacteria → Terrabacteria group	559	Open in IMG/M
3300005471\|Ga0070698_100878289	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300005518\|Ga0070699_101624239	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300005529\|Ga0070741_10935996	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300005540\|Ga0066697_10738304	All Organisms → cellular organisms → Bacteria → Terrabacteria group	537	Open in IMG/M
3300005544\|Ga0070686_100875566	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300005557\|Ga0066704_10484723	All Organisms → cellular organisms → Bacteria → Terrabacteria group	816	Open in IMG/M
3300005559\|Ga0066700_10162115	All Organisms → cellular organisms → Bacteria	1523	Open in IMG/M
3300005561\|Ga0066699_10497677	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300005576\|Ga0066708_10128093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1538	Open in IMG/M
3300005618\|Ga0068864_102268860	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300005841\|Ga0068863_101594033	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300005993\|Ga0080027_10304056	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300005994\|Ga0066789_10101443	All Organisms → cellular organisms → Bacteria	1236	Open in IMG/M
3300006580\|Ga0074049_11758820	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300006806\|Ga0079220_11371598	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300009012\|Ga0066710_103784384	All Organisms → cellular organisms → Bacteria → Terrabacteria group	568	Open in IMG/M
3300009137\|Ga0066709_104059422	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300009137\|Ga0066709_104131368	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300009641\|Ga0116120_1076174	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1124	Open in IMG/M
3300010329\|Ga0134111_10010664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2935	Open in IMG/M
3300010341\|Ga0074045_10518072	All Organisms → cellular organisms → Bacteria → Terrabacteria group	765	Open in IMG/M
3300010379\|Ga0136449_100545285	All Organisms → cellular organisms → Bacteria	1997	Open in IMG/M
3300012008\|Ga0120174_1025881	Not Available	1807	Open in IMG/M
3300012008\|Ga0120174_1100135	All Organisms → cellular organisms → Bacteria → Terrabacteria group	719	Open in IMG/M
3300012010\|Ga0120118_1063032	All Organisms → cellular organisms → Bacteria → Terrabacteria group	921	Open in IMG/M
3300012011\|Ga0120152_1022819	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2325	Open in IMG/M
3300012014\|Ga0120159_1061420	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1152	Open in IMG/M
3300012014\|Ga0120159_1093990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	866	Open in IMG/M
3300012019\|Ga0120139_1122173	All Organisms → cellular organisms → Bacteria → Terrabacteria group	665	Open in IMG/M
3300012201\|Ga0137365_11350327	All Organisms → cellular organisms → Bacteria → Terrabacteria group	504	Open in IMG/M
3300012208\|Ga0137376_11358102	All Organisms → cellular organisms → Bacteria → Terrabacteria group	601	Open in IMG/M
3300012349\|Ga0137387_11188974	Not Available	539	Open in IMG/M
3300012350\|Ga0137372_10337636	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300012354\|Ga0137366_11008758	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae → Chlorobium/Pelodictyon group → Chlorobium → Chlorobium limicola	579	Open in IMG/M
3300012356\|Ga0137371_10389345	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1081	Open in IMG/M
3300012356\|Ga0137371_10791524	All Organisms → cellular organisms → Bacteria → Terrabacteria group	723	Open in IMG/M
3300012359\|Ga0137385_11012718	All Organisms → cellular organisms → Bacteria → Terrabacteria group	685	Open in IMG/M
3300012898\|Ga0157293_10074812	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300012923\|Ga0137359_11392884	All Organisms → cellular organisms → Bacteria → Proteobacteria	589	Open in IMG/M
3300012930\|Ga0137407_12005518	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300012939\|Ga0162650_100073264	All Organisms → cellular organisms → Bacteria → Terrabacteria group	586	Open in IMG/M
3300012955\|Ga0164298_11664178	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → Chlorobia → Chlorobiales → Chlorobiaceae → Chlorobaculum → Chlorobaculum limnaeum	505	Open in IMG/M
3300012977\|Ga0134087_10044672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1728	Open in IMG/M
3300012977\|Ga0134087_10337218	All Organisms → cellular organisms → Bacteria → Terrabacteria group	717	Open in IMG/M
3300013501\|Ga0120154_1014710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2111	Open in IMG/M
3300013765\|Ga0120172_1084888	All Organisms → cellular organisms → Bacteria → Terrabacteria group	779	Open in IMG/M
3300013768\|Ga0120155_1206893	All Organisms → cellular organisms → Bacteria → Terrabacteria group	517	Open in IMG/M
3300014056\|Ga0120125_1039031	All Organisms → Viruses → Predicted Viral	1029	Open in IMG/M
3300014056\|Ga0120125_1039819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1019	Open in IMG/M
3300014299\|Ga0075303_1088978	All Organisms → cellular organisms → Bacteria → Terrabacteria group	585	Open in IMG/M
3300014498\|Ga0182019_11058167	All Organisms → cellular organisms → Bacteria → Terrabacteria group	591	Open in IMG/M
3300014501\|Ga0182024_11365716	All Organisms → cellular organisms → Bacteria → Terrabacteria group	817	Open in IMG/M
3300014658\|Ga0181519_10525097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	729	Open in IMG/M
3300014823\|Ga0120170_1020019	All Organisms → cellular organisms → Bacteria	1892	Open in IMG/M
3300014823\|Ga0120170_1054240	All Organisms → cellular organisms → Bacteria → Terrabacteria group	890	Open in IMG/M
3300014827\|Ga0120171_1031415	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1849	Open in IMG/M
3300014829\|Ga0120104_1072568	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300015086\|Ga0167655_1003183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	4004	Open in IMG/M
3300015190\|Ga0167651_1095708	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300015203\|Ga0167650_1004025	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4384	Open in IMG/M
3300015371\|Ga0132258_12137135	All Organisms → cellular organisms → Bacteria	1406	Open in IMG/M
3300015372\|Ga0132256_100102434	All Organisms → cellular organisms → Bacteria	2791	Open in IMG/M
3300015372\|Ga0132256_100660023	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1161	Open in IMG/M
3300015372\|Ga0132256_102209600	All Organisms → cellular organisms → Bacteria → Terrabacteria group	655	Open in IMG/M
3300015372\|Ga0132256_103571978	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300015373\|Ga0132257_102952043	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300015374\|Ga0132255_105995552	All Organisms → cellular organisms → Bacteria → Terrabacteria group	514	Open in IMG/M
3300015374\|Ga0132255_106232712	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300017931\|Ga0187877_1211808	All Organisms → cellular organisms → Bacteria → Terrabacteria group	757	Open in IMG/M
3300017959\|Ga0187779_11242802	Not Available	525	Open in IMG/M
3300017965\|Ga0190266_11013335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300017974\|Ga0187777_10984526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	609	Open in IMG/M
3300018024\|Ga0187881_10310341	All Organisms → cellular organisms → Bacteria → Terrabacteria group	653	Open in IMG/M
3300018028\|Ga0184608_10068246	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1436	Open in IMG/M
3300018028\|Ga0184608_10393474	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300018054\|Ga0184621_10370770	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300018056\|Ga0184623_10348201	All Organisms → cellular organisms → Bacteria → Terrabacteria group	664	Open in IMG/M
3300018071\|Ga0184618_10513276	Not Available	502	Open in IMG/M
3300018433\|Ga0066667_10854796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	779	Open in IMG/M
3300018433\|Ga0066667_11179141	All Organisms → cellular organisms → Bacteria → Terrabacteria group	665	Open in IMG/M
3300018465\|Ga0190269_11604219	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300018468\|Ga0066662_10942084	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300019788\|Ga0182028_1368231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2602	Open in IMG/M
3300021860\|Ga0213851_1621579	All Organisms → cellular organisms → Bacteria → Terrabacteria group	609	Open in IMG/M
3300022881\|Ga0224545_1055065	Not Available	561	Open in IMG/M
3300025898\|Ga0207692_10707983	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300026536\|Ga0209058_1241226	All Organisms → cellular organisms → Bacteria → Terrabacteria group	647	Open in IMG/M
3300028565\|Ga0302145_10108029	Not Available	947	Open in IMG/M
3300028715\|Ga0307313_10109242	All Organisms → cellular organisms → Bacteria → Terrabacteria group	843	Open in IMG/M
3300028722\|Ga0307319_10103087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	915	Open in IMG/M
3300028762\|Ga0302202_10121041	Not Available	1458	Open in IMG/M
3300028765\|Ga0302198_10224855	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300028779\|Ga0302266_10156380	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300028782\|Ga0307306_10265491	All Organisms → cellular organisms → Bacteria → Terrabacteria group	505	Open in IMG/M
3300028784\|Ga0307282_10430082	All Organisms → cellular organisms → Bacteria → Terrabacteria group	640	Open in IMG/M
3300028796\|Ga0307287_10280889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	630	Open in IMG/M
3300028803\|Ga0307281_10293883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	605	Open in IMG/M
3300028814\|Ga0307302_10393551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	685	Open in IMG/M
3300028819\|Ga0307296_10493880	All Organisms → cellular organisms → Bacteria → Terrabacteria group	670	Open in IMG/M
3300028856\|Ga0302295_1166639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300028885\|Ga0307304_10549932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	532	Open in IMG/M
3300030003\|Ga0302172_10257710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300030051\|Ga0302195_10021547	All Organisms → cellular organisms → Bacteria	4161	Open in IMG/M
3300030114\|Ga0311333_12023386	All Organisms → cellular organisms → Bacteria → Terrabacteria group	503	Open in IMG/M
3300031094\|Ga0308199_1190518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	511	Open in IMG/M
3300031258\|Ga0302318_10168590	Not Available	1036	Open in IMG/M
3300031708\|Ga0310686_106205137	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6431	Open in IMG/M
3300031918\|Ga0311367_10350196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1526	Open in IMG/M
3300032053\|Ga0315284_12307653	All Organisms → cellular organisms → Bacteria → Terrabacteria group	532	Open in IMG/M
3300032160\|Ga0311301_11857334	All Organisms → cellular organisms → Bacteria → Terrabacteria group	713	Open in IMG/M
3300032164\|Ga0315283_11885596	All Organisms → cellular organisms → Bacteria → Terrabacteria group	598	Open in IMG/M
3300032275\|Ga0315270_10453744	All Organisms → cellular organisms → Bacteria → Terrabacteria group	823	Open in IMG/M
3300032397\|Ga0315287_11655530	All Organisms → cellular organisms → Bacteria → Terrabacteria group	718	Open in IMG/M
3300032516\|Ga0315273_12640568	All Organisms → cellular organisms → Bacteria → Terrabacteria group	574	Open in IMG/M
3300032955\|Ga0335076_10001231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	24710	Open in IMG/M
3300033405\|Ga0326727_10262956	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1759	Open in IMG/M
3300033803\|Ga0314862_0106934	Not Available	652	Open in IMG/M
3300033827\|Ga0334848_004821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3543	Open in IMG/M
3300034124\|Ga0370483_0000156	Not Available	20588	Open in IMG/M
3300034199\|Ga0370514_006272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2688	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.73%
Host-Associated	Host-Associated	8.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.95%
Aquatic	Environmental → Aquatic	12.78%
Plants	Host-Associated → Plants	8.27%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.42%
Peat	Environmental → Terrestrial → Peat	9.77%
Freshwater	Environmental → Aquatic → Freshwater	8.27%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.26%
Sediment	Environmental → Aquatic → Sediment	3.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.01%
Marine	Environmental → Aquatic → Marine	0.75%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.64%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.77%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.77%
Lake	Environmental → Aquatic → Freshwater → Lake	3.76%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.76%
Loam	Environmental → Terrestrial → Soil → Loam	3.01%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.01%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.01%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.26%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.75%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.75%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.32%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	15.79%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.28%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.77%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.02%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	3.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.76%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.76%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.01%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.01%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.01%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.26%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.75%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.75%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.75%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	14.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.28%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.51%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	4.51%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	3.76%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.76%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	3.01%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.01%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	3.01%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	2.26%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.26%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.26%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.50%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.50%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.50%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.50%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.50%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.50%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.75%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.75%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.75%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.75%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.75%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.75%
Permafrost And Active Layer Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost And Active Layer Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.75%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.75%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.75%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.75%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.75%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.75%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.75%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.75%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908032	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_all	Environmental	Open in IMG/M
3300001334	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A21-65cm)- 6 month illumina	Environmental	Open in IMG/M
3300001535	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illumina	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300002028	Permafrost and active layer soil microbial communities from McGill Arctic Research Station (MARS), Canada, for enrichment studies - Sample_A17	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005204	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012008	Permafrost microbial communities from Nunavut, Canada - A39_80cm_12M	Environmental	Open in IMG/M
3300012010	Permafrost microbial communities from Nunavut, Canada - A7_35cm_12M	Environmental	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012014	Permafrost microbial communities from Nunavut, Canada - A10_80cm_6M	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013501	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25M	Environmental	Open in IMG/M
3300013765	Permafrost microbial communities from Nunavut, Canada - A30_80cm_6M	Environmental	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300014299	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D1	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014823	Permafrost microbial communities from Nunavut, Canada - A3_80cm_0M	Environmental	Open in IMG/M
3300014827	Permafrost microbial communities from Nunavut, Canada - A3_80cm_18M	Environmental	Open in IMG/M
3300014829	Permafrost microbial communities from Nunavut, Canada - A10_35cm_6M	Environmental	Open in IMG/M
3300015086	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-5c, rocky medial moraine)	Environmental	Open in IMG/M
3300015190	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4a, rock/ice/stream interface)	Environmental	Open in IMG/M
3300015203	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3c, vegetated patch on medial moraine)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022881	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300028565	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_3	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028765	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_2	Environmental	Open in IMG/M
3300028779	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028856	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N2_4	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030003	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_3	Environmental	Open in IMG/M
3300030051	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033803	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_0_10	Environmental	Open in IMG/M
3300033827	Peat soil microbial communities from Stordalen Mire, Sweden - 714 E2 5-9	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Perma_A_C_00508920	2124908032	Soil	DDYNLHWGHRLLSHYLTEAGVPHVHMENPGNHGGRWPERYQVALKWLSNVLEHQPA
A2165W6_13507322	3300001334	Permafrost	DYNLHWGHRLLSHYLNEAGIAHEHRENPGNHGGRANERYQMALQWLSQVLERD*
A3PFW1_108853781	3300001535	Permafrost	AGSNDDYNLHWGHRLLSHYLNEAGIAHEHRENPGNHGGRANERYQMALQWLSQVLERD*
A10PFW1_101510372	3300001538	Permafrost	LRKLSGILLDAGSNDDYNLHWGHRLLSHHLDEARIAHEHRENPGNHGGRADERYQVALQWLSQVLDSD*
A17_10720372	3300002028	Permafrost And Active Layer Soil	NLHWGHRLLSHHLTEARIPHEHRENPGNHGGRANERFQVALEWLSQTLDGEVA*
Ga0062593_1024313962	3300004114	Soil	ILLDAGWNDDYNLHWGHRLLSHHLSGAGIPHDHRENPGNHGGRANERYQVALEWLSQVLDGDVR*
Ga0062386_1006415062	3300004152	Bog Forest Soil	LLDAGVRDNYELQWGHRVLSHRLTEAGIAHKMTENPGNHGGRAEERLQVALEWLGQVLQHQ*
Ga0062595_1024329991	3300004479	Soil	ILLDAGTKDDYNLHWGHRLLSHYLTEAGVPHLHTENPGNHGGRWPERYQVALRWLSGVLDHEPAR*
Ga0066688_106627653	3300005178	Soil	LGNLRKLSGILLDAGSNDDYNLHWGHRLLSHYLHEAGIAHEATENTGNHGGRARERYQVALHWLSHVLERD*
Ga0066685_105305162	3300005180	Soil	SNDDYNLHWGHRLLSHYLTQAGIAHEHRENSGNHGGRHRERYQMALEWLPQVLDRDAI*
Ga0068997_100431731	3300005204	Natural And Restored Wetlands	RKLSGILLDVGSNDDYNLHWGHRLLSHHLNDAGIAHEARENTGNHGGRANERYQLALQWLSHVLERD*
Ga0068869_1000401161	3300005334	Miscanthus Rhizosphere	NLRKLSAILLDAGANDDYNLHWGHRLLSHYLGQAGIKHEHRENPGNHGGRARERFQMALEWLGQVLSHQDAVP*
Ga0066689_108669161	3300005447	Soil	GSNDDYNLHWGHRLLSHHLKEAGISHEHKENPGNHGGRANERHQMALQWLSHVLDHDAT*
Ga0070698_1008782893	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	DDYNLHWGHRLLSHYLDEAGIAHEHRENPGNHGGRANERLQVALQWLSQVLTAD*
Ga0070699_1016242392	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	ILLDAGSNDDYNLHWGHRLLSHYLHEAGIAHEHRENPGNHGGRANERQQMALHWLSQVLEGD*
Ga0070741_109359962	3300005529	Surface Soil	LLDAGSNDDYNLHWGHRLLSHYLSEAGIAHEHRENPGNHGGRAYERYQMALQWLSQVLERD*
Ga0066697_107383042	3300005540	Soil	NDDYNLHWGHRLLSHYLNEAGIAHEHRENPGNHGGRAYERYQMALQWLSQVLDGD*
Ga0070686_1008755661	3300005544	Switchgrass Rhizosphere	NLRKLSGILLDAGWNDDYNLHWGHRLLSHHLTGAGIPHDHRENPGNHGGRANERYQVALEWLSQVLDGDVR*
Ga0066704_104847231	3300005557	Soil	LHWGHRLLSHHLNEAGISHEHRENPGNHGGRANERYQVALEWLSQVLAGAQADCIQGDA*
Ga0066700_101621154	3300005559	Soil	GILLDAGSNDDYNLHWGHRLLSHYLDEAGIAHEHRENPGNHGGRANERYQVALQWLSDVLARD*
Ga0066699_104976772	3300005561	Soil	SGILLDAGSNDDYNLHWGHRLLSHHLDEAGIAHEHRENSGNHGGRARERYQMALQWLSQVLDGE*
Ga0066708_101280931	3300005576	Soil	NDDYNLHWGHRLLSHYLDEAGIAHEHRENPGNHGGRANERYQVALQWLSDVLAGD*
Ga0068864_1022688602	3300005618	Switchgrass Rhizosphere	RGILLDAGQKDDYNLHWGHRLLSHHLTEAGVPHVHMENSGNHGGRWPERYHVALQWLSETLERSPA*
Ga0068863_1015940331	3300005841	Switchgrass Rhizosphere	DYNLHWGHRLLSHHLTEAGVPHVHMENPGNHGGRWPERYQVALQWLAETLEHSPA*
Ga0080027_103040562	3300005993	Prmafrost Soil	KLAGIMLDAGQKDDYNLHWGHRLLSHYLTTAGIAHEFTENPGNHGGRADERFQLALTWLSGILQRGEG*
Ga0066789_101014431	3300005994	Soil	MARGAAEGIEVGLSGILLDAGSKDDYNLHWGHRLLSHHLHEAGIAHEAHENPGNHGGRWPERYQMALRWLSQVLHAG*
Ga0074049_117588202	3300006580	Soil	NDDYNLHWGHRLLSHYLDEAGIPHEHRENSGNHGGRANERYQVALEWLSHVLERD*
Ga0079220_113715982	3300006806	Agricultural Soil	GILLDAGSNDDYNLHWGHRLLSHYLTEAGIAHEHRENPGNHGGRANERYQVALEWLANTLER*
Ga0066710_1037843842	3300009012	Grasslands Soil	HWGHRLLSHHLSEAGIPHEHRENPGNHGGRANERYQVALEWLSQTLDGDVP
Ga0066709_1040594222	3300009137	Grasslands Soil	FRDNYELHWGHRLLHHRLTEAGIEHTFTENPGNHGGRANERLQVALEWLGQVLEHE*
Ga0066709_1041313681	3300009137	Grasslands Soil	KDPTANCRERLDNLRQLSRILLDAGSRDNSELQWGHRVLHHPLTYAVIAHESTENPGNHGGRANERLQIALSWLGKVLRHE*
Ga0116120_10761742	3300009641	Peatland	LVDVGCNDDAYLQWGHRLLSHRLREAGVAHEATENTGNHGGRTRERFQVALQWLAQALASS*
Ga0134111_100106643	3300010329	Grasslands Soil	WGHRLLSHYLTEAGIAHEYRENPGNHGGRRLESFQNALEWLARILDHDRS*
Ga0074045_105180721	3300010341	Bog Forest Soil	KLNGILVDVGCNDDAYLQWGHRLLSHRLREAGVAHEATENTGNHGGRTHERFQVALQWLAQALASS*
Ga0136449_1005452851	3300010379	Peatlands Soil	WGHRLLSHHLREAGIAHEATENTGNHGGRSRERCQVALEWLAQVLERN*
Ga0120174_10258811	3300012008	Permafrost	NDDYELQWGHRLLSHYLTEADIAHEHRENTGNHGGRSDERYQVALEWLSQTLAHA*
Ga0120174_11001352	3300012008	Permafrost	NLHWGHRLLSHHLHEAGIAHEHTENPGNHGGRAYERYQVALEWLSQVLDTD*
Ga0120118_10630322	3300012010	Permafrost	NDDYNLHWGHRLLSHYLNEAGIAHEHRENPGNHGGRAYERYQMALQWLSQVLERD*
Ga0120152_10228194	3300012011	Permafrost	LLDAGSNDDYNLHWGHRLLSHHLHEAGIAHEHTENPGNHGGRAYERYQVALEWLSQVLDTD*
Ga0120159_10614201	3300012014	Permafrost	NLRKLSGILLDAGSNDDYNLHWGHRLLSHHLHEAGIAHEHTENPGNHGGRAFERYQVALEWLSQVLDEG*
Ga0120159_10939901	3300012014	Permafrost	HWGHRLLSHYLDEAGIAHEHRENPGNHGGRADERYQVALQWLSDVLAGD*
Ga0120139_11221731	3300012019	Permafrost	GSNDDYNLHWGHRLLSHYLDEAGIAHEHRENPGNHGGRANERYQVALRWLSDVLDGD*
Ga0137365_113503271	3300012201	Vadose Zone Soil	LSGILLDAGCNDDYNLHWGHRLLSHHLNEAGIAHEARENAGNHGGRARERYQLALQWLSQVLDGD*
Ga0137376_113581021	3300012208	Vadose Zone Soil	NVRDRHDNLRKLAGILLDAGSNDDYNLYWGHRLLSHRLREAGIAHDSRENAGNHGGRWPERYQAALEWLSQVLARS*
Ga0137387_111889742	3300012349	Vadose Zone Soil	HWGHRLLSHYLTEAGIPHEHRENPGNHGGRAMERYQVALQWLSEVLASD*
Ga0137372_103376362	3300012350	Vadose Zone Soil	LDAGSNDDYNLHWGHRLLSHYLNEAGIAHEHRENPGNHGGRAYERYQMALQWLSQVLERD
Ga0137366_110087581	3300012354	Vadose Zone Soil	NVHDRLDNLRKLSGILLDAGSYDDYNLHWGHRLLSHHLADAGIAHEHIENSGNHGGRANERYQVALQWLADILHGD*
Ga0137371_103893451	3300012356	Vadose Zone Soil	NDDYNLHWGHRLLSHYLTQAGIAHEHRENSGNHGGRHRERYQMALEWLPQVLDRDAI*
Ga0137371_107915241	3300012356	Vadose Zone Soil	LAGIMLDAGSRDNYELQWGHRVLHHRLTESGIEPAFTENPGNHGGRANERLQIALSWLGKVLRHE*
Ga0137385_110127182	3300012359	Vadose Zone Soil	DAGSQDDYNLHWGHRLLSHHLNEAGIAHEHRENPGNHGGRANERYQMALTWLATVLKTEG
Ga0157293_100748121	3300012898	Soil	DVGSNDDYNLHWGHRLLSHYLNEAEIAHEHRENPGNHGGRANERYQVALEWLSQVLAGDVT*
Ga0137359_113928842	3300012923	Vadose Zone Soil	LDNHRKHSGILLDAGSRDNYELQWGHRVLHHRLTETGIAHDFTENPGNHGGRANERLQIALSWLGKVLRHE*
Ga0137407_120055181	3300012930	Vadose Zone Soil	NLRKLSGILLDAGSNDDYNLHWGHRLLSHHLNQAGIAHEHRENPGNHGGRANERYQMALEWLSHVLDRGGI*
Ga0162650_1000732641	3300012939	Soil	SGILLDAGSADDYNLHWGHRLLSHYLHEAGIAHEHRENPGNHGGRANERHQMALQWLSQVLDSD*
Ga0164298_116641781	3300012955	Soil	MHDRLDILRKLTGILLDAGSNDDYNLHWGHRLLSHYLNEAGIAPAHREQPGNHGGRAYERYQMALQWLSQVLERD*
Ga0134087_100446723	3300012977	Grasslands Soil	LLDAGSNDDYNLHWGHRLLSHYLTQAGIAHEHRENSGNHGGRHRERYQMALEWLPQVLDRDAI*
Ga0134087_103372181	3300012977	Grasslands Soil	AGSNDDYNLHWGHRLLSHHLAEAGIAHEHSENTGNHGGRANERYQVALQWMAEILRGD*
Ga0120154_10147102	3300013501	Permafrost	NLHWGHRLLSHYLNEAGIAHEHRENPGNHGGRANERYQMALQWLSQVLERD*
Ga0120172_10848882	3300013765	Permafrost	NDDYNLHWGHRLLSHYLHEAGIAHEHRENPGNHGGRARERYQVALQWLSQVLDSD*
Ga0120155_12068931	3300013768	Permafrost	DDYNLHWGHRLLSHHLTEAGIPHEHRENPGNHGGRANERFQVALEWLSQTLDGEVA*
Ga0120125_10390311	3300014056	Permafrost	LLDAGSNDDYNLHWGHRLLSHYLAAAGIAHEHRENSGNHGGRANERYQVALQWLSDVLDGD*
Ga0120125_10398191	3300014056	Permafrost	VGHRVLSHRLTRAGIAHTFTENAGNHGGRANERLQVALEWLGQVLEHE*
Ga0075303_10889783	3300014299	Natural And Restored Wetlands	RDNYELHWGHRLLHHRLTAAGIEHTFTENPGNHGGRANERLQVALEWLGQVLEHE*
Ga0182019_110581671	3300014498	Fen	GTKDDFELQWGHRLLSHYLQQAGIAHEATENTGNHGGRSRERHQIALQWLAGVLEHAEPDGR*
Ga0182024_113657161	3300014501	Permafrost	QWGHRVLSHHLRESGIVHEYTENPGNHGGRSRERIQVALQWLAQVLAGDEL*
Ga0181519_105250971	3300014658	Bog	VVNWQHRLDNLRQLSGILLDAGVMDDHDLHWGHRILSHRLTGAGIPHVITENPGNHGGRSRERQQVALEWLGGVLTHG*
Ga0120170_10200191	3300014823	Permafrost	LQWGHRLLSHYLTEADIAHEHRENTGNHGGRSDERYQVALEWLSQTLAHA*
Ga0120170_10542402	3300014823	Permafrost	ILLDAGSNDDYNLHWGHRLLSHYLNEAGIAHEHRENPGNHGGRAYERYQMALQWLSQVLERD*
Ga0120171_10314151	3300014827	Permafrost	YNLHWGHRLLSHHLHEAGIAHEHTENPGNHGGRAFERYQVALEWLSQVLDTD*
Ga0120104_10725682	3300014829	Permafrost	ETGRERLDNRRKLSGILLDAGSRDNYELQWGHRVLHHRLTEAGIAHDFTENPGNHGGRANERLQIALSWLGKVLRHE*
Ga0167655_10031834	3300015086	Glacier Forefield Soil	MVRDSHRLLSHHLQEAGMAHEARENPGNHGGRWPERYQMALQRLSQVLDTV*
Ga0167651_10957081	3300015190	Glacier Forefield Soil	KLSGILLDAGTDDDYNLHWGHRLLSHHLTEAGIAHEHRENPGNHGGRAYERYQVALEWLSQVLDEG*
Ga0167650_10040253	3300015203	Glacier Forefield Soil	MLDAGTHDEYNLHWGHRLLSHHLTTAGIAHVATENPSNHGGRSDERYQVALKWLLGVLQREA*
Ga0132258_121371354	3300015371	Arabidopsis Rhizosphere	DNLKLLRGILLDAGQKDDYNLHWGHRLLSHYLSESGVQHVHMENPGNHGGRWPERYQVALQWLSETLEHSPA*
Ga0132256_1001024344	3300015372	Arabidopsis Rhizosphere	LLDAGSNDDYNLHWGHRLLSHYLNEAGIAHEHRENPGNHGGRAYERYQMALQWLSQVLKRD*
Ga0132256_1006600233	3300015372	Arabidopsis Rhizosphere	NVHGRVDNLRKLSGILLDAGWNDDYNLHWGHRLLSHHLSEAGIQHDHRENPGNHGGRANERYQVALEWLSQNPDGDVP*
Ga0132256_1022096002	3300015372	Arabidopsis Rhizosphere	NLHWGHRLLSHHLTEAGISHEHRENAGNHGGRANERYQIALEWLSQVLDGDAT*
Ga0132256_1035719782	3300015372	Arabidopsis Rhizosphere	AGSRDNYELQWGHRVLHHRLTEAGIAHDFTENPGNHGGRANERLQIALSWLGKVLRHE*
Ga0132257_1029520432	3300015373	Arabidopsis Rhizosphere	KLSGILLDAGSNDDYNLHWGHRLLSHYLNEAGIAHEHRENPGNHGGRANERYQVALEWLSHVLERG*
Ga0132255_1059955523	3300015374	Arabidopsis Rhizosphere	RKLWGILLDAGFRDNYELQWGHRVLHHRLTEAGIAHTFTENPGNHGGRATERLQTALDWLGHVLDHD*
Ga0132255_1062327122	3300015374	Arabidopsis Rhizosphere	DAGQKDDYNLHWGHRLLSHYLNEAGVPHVHTENSGNHGGRWPERYQVALEWLAGVLDHEPGR*
Ga0187877_12118081	3300017931	Peatland	DQHLQWGHRLLSHHLREDGIAHDATENTGNHGGRSRERCQVALWWLAQVLAES
Ga0187779_112428021	3300017959	Tropical Peatland	NDDYNLHWGHRLLSHYLTEAGISHEHRENAGNHGGRSKERYQVALEWLSKTLEHA
Ga0190266_110133352	3300017965	Soil	LDAGSNDDYNLHWGHRLLSHYLDEANIAHEHRENPGNHGGRANERYQVALEWLSHVLERG
Ga0187777_109845261	3300017974	Tropical Peatland	WGHRLLSHHLTEAGIPHEHREYSGNHGGRARERFQVSLEWLSQALDRDA
Ga0187881_103103411	3300018024	Peatland	ILLDVGCNDDQHLQWGHRLLSHHLREAGIAHDATENTGNHGGRSRERCQVALRWLAQVLAES
Ga0184608_100682461	3300018028	Groundwater Sediment	NLHWGHRLLSHYLDEADIAHEHRENPGNHGGRANERYQVALEWLSHVLERD
Ga0184608_103934741	3300018028	Groundwater Sediment	LDAGSNDDYNLHWGHRLLSHYLDEAGIAHEHRENPGNHGGRANERYQVALQWLSHVLERD
Ga0184621_103707701	3300018054	Groundwater Sediment	NLRKLTGILLDAGSNDDYNLHWGHRLLSHYLNEAGIAHEHRENPGNHGGRAYERYQMALQWLSQILERD
Ga0184623_103482013	3300018056	Groundwater Sediment	LLDAGQKDDYNLHWGHRLLSHYLTEAGVPHLHTENSGNHGGRWPERYQVALEWLSGVLEHQSA
Ga0184618_105132762	3300018071	Groundwater Sediment	LRKLAGILLDAGSHDDYNLHWGHRLLSHHLTAARIAHEATENAGNHGGRWPERYQVALRWMSGVLHHG
Ga0066667_108547961	3300018433	Grasslands Soil	WGHRLLSHYLTEAGIAHEHRENPGNHGGRSNERYQVALEWLSGVLASSPGD
Ga0066667_111791412	3300018433	Grasslands Soil	SGILLDAGSNDDYNLHWGHRLLSHYLTQAGIAHEHRENSGNHGGRHRERYQMALEWLPQVLDRDAI
Ga0190269_116042192	3300018465	Soil	GILLDAGSNDDYNLHWGHRLLSHYLAEAGIAHQHRENPGNHGGRANERYQVALEWLSHVLERD
Ga0066662_109420841	3300018468	Grasslands Soil	NDDYNLHWGHRLLSHHLDQAGIKHEHRENSGNHGGRANERFQMALEWLGQVLAHQTP
Ga0182028_13682312	3300019788	Fen	MGHRLLSHRLREAGIAHEASENTGSHGGRSRERYQLTLEWLAQVLERS
Ga0213851_16215791	3300021860	Watersheds	SGILLDAGVNDDYELQWGHRLLSHRLTQAGVRHTKTENPGNHGGRSRERQQVALEWLAGVLAHD
Ga0224545_10550651	3300022881	Soil	GSNDDYNLHWGHRLLSHHLNAAGIEHEHRENSGNHGGRSRERYQVALSWLSQVLERA
Ga0207692_107079832	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VRGIMLDAGSNDDYNLHWGHRLLSHYLTEAGIAHEHRENPGNHGGRANERYQVALEWLAAVLAR
Ga0209058_12412262	3300026536	Soil	AGSNDDYNLHWGHRLLSHYLNEAGIAHEHRENPGNHGGRAYERYQMALQWLSQVLERD
Ga0302145_101080292	3300028565	Bog	DYHLQWGHRLLSHHLSRAGIAHEATENTGSHGGRARERYQVTLQWMAQVLARS
Ga0307313_101092422	3300028715	Soil	GSNDDYNLHWGHRLLSHYLDEAGIAHEHRENPGNHGGRANERYQVALEWLSHVLVRD
Ga0307319_101030872	3300028722	Soil	LDAGSADDYNLHWGHRLLSHYLDESGIEHEHRENPGNHGGRANERYQVALEWLSHVLERD
Ga0302202_101210412	3300028762	Bog	NYRDRLDNLARLAGILLDVGCHDDYHLQWGHRLLSHYLNEAGVVHEVTEHAGNHGGRSRERYQLTLRWLSRVLTPSPTRGR
Ga0302198_102248552	3300028765	Bog	DDYHLQWGHRLLSHYLNEAGVVHEVTEHAGNHGGRSRERYQLTLRWLSRVLTPSPTRGR
Ga0302266_101563802	3300028779	Bog	DNLRKLTGILLDVGCNDDYHLQWGHRLLSHHLSRAGIAHEATENTGSHGGRARERYQVTLQWMAQVLARS
Ga0307306_102654912	3300028782	Soil	LDAGAADDYNLHWGHRLLSHYLHEAGIAHEHRENPGNHGGRANERYQVALEWLSHVLERD
Ga0307282_104300821	3300028784	Soil	VNYADRLDNLRRLSGILLDAGVHDNYELQWGHRVLSHRLTEAGIAHTFTENAGNLDGRANERLQVALE
Ga0307287_102808892	3300028796	Soil	LHWGHRLLSHYLDEAGIAHEHRENPGNHGGRANERYQVALEWLSHVLERD
Ga0307281_102938831	3300028803	Soil	DYNLHWGHRLLSHYLDEAGIAHEHRENPGNHGGRANERYQVALEWLSQVLVRD
Ga0307302_103935511	3300028814	Soil	ENLRQLSGILLDAGSADDYNLHWGHRLLSHYLDEAGIAHEHRENPGNHGGRANERYQVALQWLSHVLERD
Ga0307296_104938802	3300028819	Soil	SNDDYNLHWGHRLLSHYLNEAGIAHEHRENPGNHGGRAYERYQMALQWLSQVLERD
Ga0302295_11666391	3300028856	Fen	LHWGHRLLGHYLDRAGIAHEHTENPGNHGGRANERYQVALQWLSHVLPGPER
Ga0307304_105499322	3300028885	Soil	NDDYNLHWGHRLLSHYLHEAGIAQEHRENPGNHGGRANERYQVALEWLSHVLERD
Ga0302172_102577102	3300030003	Fen	ILLDAGSNDDYNLHWGHRLLGHYLDRAGIAHEHTENPGNHGGRANERYQVALQWLSHVLPGPER
Ga0302195_100215471	3300030051	Bog	RKLTGILLDVGCNDDYHLQWGHRLLSHHLSRAGIAHEATENTGSHGGRARERYQVTLQWMAQVLARS
Ga0311333_120233861	3300030114	Fen	INIHDRLDNLRQLSGILLDVGNEDDFNFQWGHRLLSHRLQEAGIAHIAREYNGDHGGRHRERYQLALQWLSGVLDHG
Ga0308199_11905181	3300031094	Soil	HWGHRLLSHYLHEAGVAHEHRENPGNHGGRANERYQVALEWLSQVLVRD
Ga0302318_101685901	3300031258	Bog	HRLLSHHLSRAGIAHEATENTGSHGGRARERYQVTLQWMAQVLARS
Ga0310686_1062051372	3300031708	Soil	LENLRKLSGILLDVGVSDDYELQWGHRLLSHHLTGASITHEATENEGDHGGISRERVQVGLRWLSRILSRS
Ga0311367_103501961	3300031918	Fen	WGHRLLSHHLKEAGISHETREYNGDHGGRHRERYQLALQWLSGVLDGN
Ga0315284_123076532	3300032053	Sediment	LHWGHRLLSHYLDEAGIAHEHRENPGNHGGRARERYQVALQWLSQVLDGD
Ga0311301_118573342	3300032160	Peatlands Soil	WGHRLLSHHLREAGIAHEATENTGNHGGRSRERCQVALEWLAQVLERN
Ga0315283_118855961	3300032164	Sediment	GILLDAGSNDDYNLHWGHRLLSHHLDEAGIAHEHRENPGNHGGRANERYQMALQWLSEVLDGD
Ga0315270_104537442	3300032275	Sediment	YNLHWGHRLLSHHLTTAGIAHAATENAGNHGGRWPERYQVTLQWMSGVLRRD
Ga0315287_116555301	3300032397	Sediment	DDYNLHWGHRLLSHHLMTAGIAHVATENAGNHGGRWPERYQVALQWMSGVLRRD
Ga0315273_126405682	3300032516	Sediment	GILLDVGFNDDYNLHWGHRLLSHYLDEAGIAHEHRENPGNHGGRARERYQVALQWLSQVLAGD
Ga0335076_1000123134	3300032955	Soil	DRLENLRKLRGIMLDAGSNDDYNLHWGHRLLSHYLNLNQAGIVHEHRENPGNHGGRHPERYQVALEWLSSTLEHA
Ga0326727_102629563	3300033405	Peat Soil	SFDPVVNWRGRLDNLRKLSGVLLDVGSNDDHYLQWGHRLLSHHLSEAGVEHRANENTGNHGGRSRERFQVALQWLAQVLTRS
Ga0314862_0106934_3_182	3300033803	Peatland	DAGANDDYNLHWGHRLLSHYLTEAGIPHEHRENTGNHGGRFPERYQVALEWLSRSLQHG
Ga0334848_004821_1_198	3300033827	Soil	LTGILLDVGCNDDYHLQWGHRLLSHHLSRAGIAHEATENTGSHGGRARERYQVTLQWMAQVLARS
Ga0370483_0000156_10030_10206	3300034124	Untreated Peat Soil	MAINDDYNLHWGHRLLSHHLGAAGIEHEHRENSGDHGGRARERYQVALAWLSQVLDRP
Ga0370514_006272_389_565	3300034199	Untreated Peat Soil	MAINDDYNLHWGHRLLSHHLGAAGIEHEHRENSGDHGGRARERYQVALAWLSQVLDRT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059926

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences