Metagenome / Metatranscriptome Family F059929

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059929
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	53 residues
Representative Sequence	MESSILSEVDDTSILRTGLPTPLWPSSQLATGLSPVAPRSGLERSDFVLWH
Number of Associated Samples	90
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.11 %
% of genes near scaffold ends (potentially truncated)	90.98 %
% of genes from short scaffolds (< 2000 bps)	85.71 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.17

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.128 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (35.338 % of family members)
Environment Ontology (ENVO)	Unclassified (68.421 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.135 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.17
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.17
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF13495	Phage_int_SAM_4	21.80
PF00589	Phage_integrase	6.02
PF00873	ACR_tran	3.76
PF14319	Zn_Tnp_IS91	3.01
PF09347	DUF1989	3.01
PF00903	Glyoxalase	2.26
PF13302	Acetyltransf_3	2.26
PF08240	ADH_N	2.26
PF00072	Response_reg	1.50
PF11843	DUF3363	1.50
PF00196	GerE	1.50
PF07715	Plug	1.50
PF04828	GFA	1.50
PF13683	rve_3	1.50
PF07813	LTXXQ	1.50
PF05494	MlaC	1.50
PF02604	PhdYeFM_antitox	0.75
PF04392	ABC_sub_bind	0.75
PF01145	Band_7	0.75
PF00581	Rhodanese	0.75
PF16868	NMT1_3	0.75
PF00486	Trans_reg_C	0.75
PF11149	DUF2924	0.75
PF02371	Transposase_20	0.75
PF03237	Terminase_6N	0.75
PF00872	Transposase_mut	0.75
PF08448	PAS_4	0.75
PF03869	Arc	0.75
PF13384	HTH_23	0.75
PF02653	BPD_transp_2	0.75
PF12833	HTH_18	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	6.02
COG2854	Periplasmic subunit MlaC of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	1.50
COG3791	Uncharacterized conserved protein	Function unknown [S]	1.50
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.75
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.75
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.75
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.75
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.63 %
Unclassified	root	N/A	47.37 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.63 %
Unclassified	root	N/A	47.37 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.13 %
Unclassified	root	N/A	47.37 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.37 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	45.11 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.50 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	1.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.37 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	33.08 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.50 %
Methanomada group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group	1.50 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.37 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9.77 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	6.77 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.76 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	3.76 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1.50 %
Methanobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria	1.50 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.37 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.77 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.76 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	3.76 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	1.50 %
Methanobacteriales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales	1.50 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	1.50 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.75 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.75 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.75 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.37 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.77 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.76 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	3.76 %
Methanobacteriaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae	1.50 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.50 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	1.50 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.75 %
Massilia group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group	0.75 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.75 %
Magnetospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.37 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.77 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	3.76 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1.50 %
Methanobacterium	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobacterium	1.50 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.50 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	1.50 %
Magnetospirillum marisnigri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum marisnigri	0.75 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.75 %
Massilia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia	0.75 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.75 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.37 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.77 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	3.76 %
unclassified Methanobacterium	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobacterium → unclassified Methanobacterium	1.50 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1.50 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.50 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	1.50 %
Massilia norwichensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → Massilia norwichensis	0.75 %
Magnetospirillum marisnigri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum marisnigri	0.75 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.75 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.75 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.37 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.77 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	3.76 %
Methanobacterium sp.	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobacterium → unclassified Methanobacterium → Methanobacterium sp.	1.50 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1.50 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.50 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	1.50 %
Massilia norwichensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → Massilia norwichensis	0.75 %
Magnetospirillum marisnigri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum marisnigri	0.75 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.75 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.75 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1021791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1014	Open in IMG/M
3300000651\|AP72_2010_repI_A10DRAFT_1013428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1057	Open in IMG/M
3300000816\|AF_2010_repII_A10DRAFT_1028283	Not Available	593	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1002361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2673	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1085103	Not Available	500	Open in IMG/M
3300001143\|JGI12687J13287_101852	Not Available	641	Open in IMG/M
3300001150\|JGI12672J13324_101420	Not Available	846	Open in IMG/M
3300001155\|JGI12625J13251_10548	Not Available	564	Open in IMG/M
3300002886\|JGI25612J43240_1044246	Not Available	647	Open in IMG/M
3300002917\|JGI25616J43925_10295621	Not Available	603	Open in IMG/M
3300003659\|JGI25404J52841_10017779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1541	Open in IMG/M
3300003911\|JGI25405J52794_10001014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4457	Open in IMG/M
3300004463\|Ga0063356_101561916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	980	Open in IMG/M
3300005163\|Ga0066823_10082294	Not Available	635	Open in IMG/M
3300005165\|Ga0066869_10006014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1531	Open in IMG/M
3300005171\|Ga0066677_10179348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1176	Open in IMG/M
3300005174\|Ga0066680_10056392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	2320	Open in IMG/M
3300005177\|Ga0066690_10035268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	2948	Open in IMG/M
3300005178\|Ga0066688_10434834	Not Available	849	Open in IMG/M
3300005218\|Ga0068996_10146196	Not Available	577	Open in IMG/M
3300005436\|Ga0070713_100766966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	923	Open in IMG/M
3300005447\|Ga0066689_10019704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3280	Open in IMG/M
3300005454\|Ga0066687_10655771	Not Available	624	Open in IMG/M
3300005518\|Ga0070699_101370667	Not Available	649	Open in IMG/M
3300005764\|Ga0066903_102162064	All Organisms → cellular organisms → Bacteria	1072	Open in IMG/M
3300005764\|Ga0066903_104161881	Not Available	774	Open in IMG/M
3300005983\|Ga0081540_1031492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2915	Open in IMG/M
3300006578\|Ga0074059_10014687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1416	Open in IMG/M
3300006604\|Ga0074060_10021188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1494	Open in IMG/M
3300006852\|Ga0075433_10865559	Not Available	789	Open in IMG/M
3300006871\|Ga0075434_100568118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1154	Open in IMG/M
3300010360\|Ga0126372_12509998	All Organisms → cellular organisms → Bacteria → Proteobacteria	566	Open in IMG/M
3300012205\|Ga0137362_11344334	Not Available	600	Open in IMG/M
3300016270\|Ga0182036_10586526	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300016319\|Ga0182033_10796301	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300016319\|Ga0182033_10907256	Not Available	780	Open in IMG/M
3300016319\|Ga0182033_11300402	Not Available	653	Open in IMG/M
3300016341\|Ga0182035_10429339	Not Available	1116	Open in IMG/M
3300016341\|Ga0182035_10497367	Not Available	1041	Open in IMG/M
3300016341\|Ga0182035_10972112	Not Available	751	Open in IMG/M
3300016357\|Ga0182032_10069319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2375	Open in IMG/M
3300016357\|Ga0182032_10100833	All Organisms → cellular organisms → Bacteria	2037	Open in IMG/M
3300016357\|Ga0182032_10786130	All Organisms → cellular organisms → Bacteria → Proteobacteria	804	Open in IMG/M
3300016357\|Ga0182032_10874695	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	763	Open in IMG/M
3300016357\|Ga0182032_11915478	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobacterium → unclassified Methanobacterium → Methanobacterium sp.	519	Open in IMG/M
3300016371\|Ga0182034_10369191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1170	Open in IMG/M
3300016371\|Ga0182034_11787666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	542	Open in IMG/M
3300016404\|Ga0182037_10242778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1421	Open in IMG/M
3300016404\|Ga0182037_10333652	Not Available	1230	Open in IMG/M
3300016404\|Ga0182037_11272716	Not Available	648	Open in IMG/M
3300016422\|Ga0182039_11971681	Not Available	537	Open in IMG/M
3300016445\|Ga0182038_10024283	All Organisms → cellular organisms → Bacteria → Proteobacteria	3706	Open in IMG/M
3300016445\|Ga0182038_10699075	All Organisms → cellular organisms → Bacteria → Proteobacteria	883	Open in IMG/M
3300018433\|Ga0066667_11541182	Not Available	589	Open in IMG/M
3300022508\|Ga0222728_1049981	Not Available	701	Open in IMG/M
3300027537\|Ga0209419_1066883	Not Available	705	Open in IMG/M
3300031546\|Ga0318538_10477609	Not Available	675	Open in IMG/M
3300031561\|Ga0318528_10021018	All Organisms → cellular organisms → Bacteria → Proteobacteria	3121	Open in IMG/M
3300031561\|Ga0318528_10451291	All Organisms → cellular organisms → Bacteria → Proteobacteria	690	Open in IMG/M
3300031572\|Ga0318515_10380866	Not Available	756	Open in IMG/M
3300031573\|Ga0310915_10212535	Not Available	1355	Open in IMG/M
3300031573\|Ga0310915_10225424	Not Available	1315	Open in IMG/M
3300031573\|Ga0310915_10414018	Not Available	957	Open in IMG/M
3300031679\|Ga0318561_10534124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	646	Open in IMG/M
3300031680\|Ga0318574_10097756	All Organisms → cellular organisms → Bacteria → Proteobacteria	1624	Open in IMG/M
3300031680\|Ga0318574_10542740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	681	Open in IMG/M
3300031682\|Ga0318560_10741881	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobacterium → unclassified Methanobacterium → Methanobacterium sp.	530	Open in IMG/M
3300031719\|Ga0306917_10155934	Not Available	1698	Open in IMG/M
3300031719\|Ga0306917_10198343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1518	Open in IMG/M
3300031719\|Ga0306917_10350440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1147	Open in IMG/M
3300031724\|Ga0318500_10402122	Not Available	681	Open in IMG/M
3300031736\|Ga0318501_10614259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	597	Open in IMG/M
3300031744\|Ga0306918_10121522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1893	Open in IMG/M
3300031744\|Ga0306918_10123341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	1880	Open in IMG/M
3300031751\|Ga0318494_10664410	Not Available	610	Open in IMG/M
3300031753\|Ga0307477_10761136	Not Available	645	Open in IMG/M
3300031763\|Ga0318537_10031371	All Organisms → cellular organisms → Bacteria → Proteobacteria	1893	Open in IMG/M
3300031763\|Ga0318537_10127361	Not Available	947	Open in IMG/M
3300031765\|Ga0318554_10081863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1801	Open in IMG/M
3300031770\|Ga0318521_10141604	All Organisms → cellular organisms → Bacteria → Proteobacteria	1359	Open in IMG/M
3300031770\|Ga0318521_10395644	Not Available	823	Open in IMG/M
3300031770\|Ga0318521_10805011	Not Available	573	Open in IMG/M
3300031770\|Ga0318521_10993394	Not Available	514	Open in IMG/M
3300031771\|Ga0318546_10854405	Not Available	640	Open in IMG/M
3300031796\|Ga0318576_10220928	Not Available	892	Open in IMG/M
3300031797\|Ga0318550_10103114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1347	Open in IMG/M
3300031819\|Ga0318568_10090596	Not Available	1820	Open in IMG/M
3300031819\|Ga0318568_10391514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	866	Open in IMG/M
3300031820\|Ga0307473_10155632	All Organisms → cellular organisms → Bacteria	1306	Open in IMG/M
3300031820\|Ga0307473_11109208	Not Available	583	Open in IMG/M
3300031845\|Ga0318511_10081791	Not Available	1349	Open in IMG/M
3300031879\|Ga0306919_10197602	Not Available	1493	Open in IMG/M
3300031879\|Ga0306919_10459361	Not Available	980	Open in IMG/M
3300031890\|Ga0306925_10739885	All Organisms → cellular organisms → Bacteria → Proteobacteria	1025	Open in IMG/M
3300031890\|Ga0306925_10794415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	983	Open in IMG/M
3300031890\|Ga0306925_10946934	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300031893\|Ga0318536_10328834	Not Available	774	Open in IMG/M
3300031894\|Ga0318522_10247121	Not Available	676	Open in IMG/M
3300031896\|Ga0318551_10307541	All Organisms → cellular organisms → Bacteria → Proteobacteria	892	Open in IMG/M
3300031910\|Ga0306923_10117779	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3010	Open in IMG/M
3300031912\|Ga0306921_10350116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1727	Open in IMG/M
3300031912\|Ga0306921_11783327	Not Available	662	Open in IMG/M
3300031941\|Ga0310912_10231420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → Massilia norwichensis	1418	Open in IMG/M
3300031941\|Ga0310912_10291417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1262	Open in IMG/M
3300031945\|Ga0310913_10096443	Not Available	1994	Open in IMG/M
3300031946\|Ga0310910_10959135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	669	Open in IMG/M
3300031947\|Ga0310909_10004313	All Organisms → cellular organisms → Bacteria → Proteobacteria	9082	Open in IMG/M
3300031947\|Ga0310909_10054471	All Organisms → cellular organisms → Bacteria → Proteobacteria	3086	Open in IMG/M
3300031954\|Ga0306926_10211673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2405	Open in IMG/M
3300031981\|Ga0318531_10228193	Not Available	840	Open in IMG/M
3300031981\|Ga0318531_10553382	Not Available	521	Open in IMG/M
3300032001\|Ga0306922_10373229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1529	Open in IMG/M
3300032001\|Ga0306922_10377488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	1519	Open in IMG/M
3300032001\|Ga0306922_11193152	Not Available	775	Open in IMG/M
3300032001\|Ga0306922_11459641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum marisnigri	685	Open in IMG/M
3300032010\|Ga0318569_10210471	Not Available	901	Open in IMG/M
3300032055\|Ga0318575_10266499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	865	Open in IMG/M
3300032059\|Ga0318533_10096358	Not Available	2041	Open in IMG/M
3300032059\|Ga0318533_11221395	Not Available	550	Open in IMG/M
3300032068\|Ga0318553_10645059	Not Available	554	Open in IMG/M
3300032076\|Ga0306924_10035749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5425	Open in IMG/M
3300032076\|Ga0306924_10275396	Not Available	1932	Open in IMG/M
3300032076\|Ga0306924_10439536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1491	Open in IMG/M
3300032076\|Ga0306924_11745404	Not Available	651	Open in IMG/M
3300032090\|Ga0318518_10557893	All Organisms → cellular organisms → Bacteria → Proteobacteria	585	Open in IMG/M
3300032090\|Ga0318518_10580890	Not Available	572	Open in IMG/M
3300032091\|Ga0318577_10141812	All Organisms → cellular organisms → Bacteria → Proteobacteria	1141	Open in IMG/M
3300032261\|Ga0306920_100110340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4079	Open in IMG/M
3300032261\|Ga0306920_100618643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1601	Open in IMG/M
3300032261\|Ga0306920_101592177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	929	Open in IMG/M
3300033158\|Ga0335077_11701627	Not Available	596	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.49%
Host-Associated	Host-Associated	4.51%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.98%
Plants	Host-Associated → Plants	4.51%
Aquatic	Environmental → Aquatic	1.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.98%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.01%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.50%
Marine	Environmental → Aquatic → Marine	0.75%
Sediment	Environmental → Aquatic → Sediment	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.71%
Loam	Environmental → Terrestrial → Soil → Loam	7.52%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.50%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.75%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.75%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	75.19%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.02%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.26%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	4.51%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.01%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.50%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.75%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.75%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	35.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.01%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.01%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.26%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.26%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.26%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.50%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.50%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.75%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.75%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.75%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000651	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10	Environmental	Open in IMG/M
3300000816	Forest soil microbial communities from Amazon forest - 2010 replicate II A10	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300001143	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1	Environmental	Open in IMG/M
3300001150	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1	Environmental	Open in IMG/M
3300001155	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1	Environmental	Open in IMG/M
3300002886	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005218	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10217911	3300000580	Forest Soil	VSLMESSILSEVDDTSILRTGLPTPLWLSSQLATGLSPLAPRSGLERSDFVP
AP72_2010_repI_A10DRAFT_10134281	3300000651	Forest Soil	MESSILSEVDDTSILRTGLPTPLWPSSQLATGLSPVAPRSGLERSDFVLWH
AF_2010_repII_A10DRAFT_10282832	3300000816	Forest Soil	VSLMESSILSEVDDTSILRTGLPTPLWLSSQLATGLSPLAPRSGLERSDFVR
AP72_2010_repI_A100DRAFT_10023614	3300000837	Forest Soil	MESSILSEVDDTSILRTGLPTPLWPSSQLATGLSPVAPRSGLERSDFVLW
AP72_2010_repI_A001DRAFT_10851032	3300000893	Forest Soil	VSLMESSILSEVDDTSILRTGLPTPLWPSSQLATGLSPVAPRSGLERSDFVL
JGI12687J13287_1018521	3300001143	Forest Soil	MESSILSEVDDTSILRTGLPRRYACPLLATGLSPRAPRSGLERSDFVLWH
JGI12672J13324_1014201	3300001150	Forest Soil	MESSVLSEVDDTSILRTGLPTPLCLSSQLATGLSPRAPRSGLERSDFVLW
JGI12625J13251_105481	3300001155	Forest Soil	MESSILSEVDDTSILRTGLPRRYACPLLATGLSPLAPRSGLERSDFVL
JGI25612J43240_10442461	3300002886	Grasslands Soil	MESSILSEVDDTSILRTELPAPLWLSSQLATGLSPRAPRSGL
JGI25616J43925_102956212	3300002917	Grasslands Soil	VSLMESSILSEVDDTSILRTELPAPLWLSSQLATGLSPRAPRSGLERSDFVP
JGI25404J52841_100177791	3300003659	Tabebuia Heterophylla Rhizosphere	VLVSLMESSILSEVDDTSILRTGLSTPLSLSSQPATASRLLPPRSGLERSDFVLW
JGI25405J52794_100010141	3300003911	Tabebuia Heterophylla Rhizosphere	MESSILSEVDDTSILRTGLSTPLSLSSQPATASRLLPPRSGLERSDFVRW
Ga0063356_1015619162	3300004463	Arabidopsis Thaliana Rhizosphere	MESSILSEVNDASILRTGLSTPLSPFSQLATGLSALAPRSGLERSDFVPWPI*
Ga0066823_100822941	3300005163	Soil	MESSILSEVDDTSILRTGLPSRYACPLLATGLSPLAPRSGLERSDFV
Ga0066869_100060142	3300005165	Soil	MESSILSEVDDTSILRTGLPTPLCLSSQLATGLSPRAPRSGLERSDFVLWH*
Ga0066677_101793481	3300005171	Soil	MESSILSEVDDTSILRTELPAPLWLSSQLATGLSPRAPRSGLERSDFVLWH
Ga0066680_100563924	3300005174	Soil	MESSILSEVDDTSILRTELPAPLWLSSQLATGLSPRAPRSGLERSDFVR*
Ga0066690_100352683	3300005177	Soil	MESSILSEVDDTSILRTELPAPLWLSSQLATGLSPRAPRSGLERSDFVH*
Ga0066688_104348341	3300005178	Soil	MESSILSEVDDTSILRTELPAPLWLSSQLATGLSPRAPRSGLERSDFVHWH
Ga0068996_101461961	3300005218	Natural And Restored Wetlands	MESSILSEVDDTSILRTGLSTPLSLFSQPANGLSALPPRSGLERSDFV
Ga0070713_1007669661	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VSLMESSILSEVDDTSILRTGLPTPLCLSSQLATGLSPRAPRSGLERSDFV
Ga0066689_100197041	3300005447	Soil	MESSILSEVDDTSILRTGLPTPLRLSSQLATGLSPRAPRSGLERSDFVRWHQV*
Ga0066687_106557712	3300005454	Soil	MESSILSEVDDTSILRTELPAPLWLSSQLATGLSPRAPRSGLERSDFVHWHQA*
Ga0070699_1013706671	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	TVLVSLMESSILSEVDDTSILRTELPAPLWLSSQLATGLSPRAPRSGLERSDFVL*
Ga0066905_1011867152	3300005713	Tropical Forest Soil	VRFANTSILRTGLSTAPSLSYQHVTALRLTAPRSGLERSDFVHWP
Ga0066903_1021620642	3300005764	Tropical Forest Soil	VDDTSILRTGLSAPLSLPSQLVTGPSPHPPRSGLERSDFVLWP*
Ga0066903_1041618812	3300005764	Tropical Forest Soil	VLVSLMESSILSEVDDTSILRTGLPRPLWLSSQLATGLSPLTPRSGLERSDFVPWHTRDD
Ga0074472_110138381	3300005833	Sediment (Intertidal)	LLNTSILRTGLPAPLHLLSQLVTDLKLAPRSGLERSDFV
Ga0081540_10314921	3300005983	Tabebuia Heterophylla Rhizosphere	VLVSLMESSILSEVDDTSILRTGLSTPLSLSSQPATASRLLPPRSGLERSDFVRWALLGPREMSDLD
Ga0074059_100146871	3300006578	Soil	MESSILSEVDDTSILRTGLPTPLCLSSQLATGLSPRAPRSGLERSDFVLWHQA*
Ga0074060_100211883	3300006604	Soil	MESSILSEVDDTSILRTGLPSRYACPLLATGLSPRAPRSGLERSDFVPWH*
Ga0075433_108655592	3300006852	Populus Rhizosphere	MESSILSEVDDTSILRTELSAPLWLSSQLASGLSPRAPRSGLERSDFVLWHSAND*
Ga0075434_1005681181	3300006871	Populus Rhizosphere	MESSILSEVDDTSILRTELSAPLWLSSQLASGLSPRAPRSGLERSDFVRWHQ
Ga0126372_125099982	3300010360	Tropical Forest Soil	SSILSEVDDSILRTGFPTPLWSSSQLATGLSPLAPRSGLERSDFVHWH*
Ga0137362_113443341	3300012205	Vadose Zone Soil	VDDTSILRTELPAPLWLSSQLATGLSPRAPRSGLERSDFVHWHQP*
Ga0182036_105865261	3300016270	Soil	ILSEVDDTSILRTGLPTPLWLSSQLATDLSPLAPRSGLERSDFVRWHRRDE
Ga0182033_107963012	3300016319	Soil	SEVDDTSILRTGLPSSLWPSSQLSIGLSPLAPRSGLERSDFVRWH
Ga0182033_109072562	3300016319	Soil	TVLVSLMESSILSEVDDTSILRTGLPSPLWPSSQLATGVSPLAPRSGLERSDFVHWQ
Ga0182033_113004021	3300016319	Soil	MESSILSEVDDTSILRTGLPTPLWPSSQLATGLSPLAPRSGLERSDFVLCPFPAI
Ga0182035_104293392	3300016341	Soil	DDTSILRTGLPTPLWLSSQLATGLSPLAPRSGLERSDFVHWHISNVR
Ga0182035_104973671	3300016341	Soil	TVLVSLMESSILSEVDDTSILRTGLPTPLWPSSQLATGLSPLAPRSGLERSDFVLCPFSA
Ga0182035_109721121	3300016341	Soil	SGLTVLGSLMESSILSEVDDTSILRTGLPSPLWPSSQLAPGLSSLAPRSGLERSDFVHWH
Ga0182032_100693191	3300016357	Soil	SLMESSILSEVDDTSILRTGLPTPLWPSSQLATGLSPLAPRSGLERSDFVLCPFPAI
Ga0182032_101008331	3300016357	Soil	VSLMRSSILSEVDDTSILRTGLPTPLWPSSQLATGLSPLAPRTVVERSDFVHWHISNVR
Ga0182032_107861301	3300016357	Soil	SEVDDTSILRTGLPTPLWPSSQLATGLSPLAPRSGLERSDFMQWH
Ga0182032_108746951	3300016357	Soil	MSISSHGSSILSEVDDTSILRTELPTPLWPSSQPATGLSPLAPRSGLERSDFVH
Ga0182032_119154782	3300016357	Soil	TVLVSLMESSILSEVDDTSILRVGLPSPLWPSSQLAAGLSPLTPRSGLERSDFVL
Ga0182034_103691911	3300016371	Soil	ESSILSEVDDTSILRTGLLTPLWSSSQLATGLSPLAPRSGLERSDFVQWH
Ga0182034_117876662	3300016371	Soil	TVLVSLMESSILSEVDDTSILRTGLPSPLGPSSQLAIGLSPLVPRSGLERSDFVHWHISA
Ga0182037_102427783	3300016404	Soil	VSLMESSILSEVDDTSILRTGLPSPLWPSSQLATGFSPLAPRSGLERSDFVHWH
Ga0182037_103336524	3300016404	Soil	LVSLMESSILSEVDDTSILRTGLPSPLWPSSQLATGVSPLAPRSGLERSDFVHWQ
Ga0182037_112727162	3300016404	Soil	SLIESSILSEVDDTSILRTGLLTPLCLPSQLATGLSPRAPRSGLERSDFVLWHQA
Ga0182039_119716811	3300016422	Soil	LTVLVSLMRSSILSEVDDTSILRTGLPTPLWPSSQLATGLSPLAPRTVVERSDFVHWHISNVR
Ga0182038_100242834	3300016445	Soil	SSILSEVDDTSILRTGLPTPLWPSSQLATGLSPLAPRSGLERSDFVLCPFPAI
Ga0182038_106990752	3300016445	Soil	ESSILSEVDDTSILRTGLPTPLWLSSQLATGLSSLAPRSGLERSDFVP
Ga0066667_115411821	3300018433	Grasslands Soil	MESSILSEVDDTSILRTELPAPLWLSSQLATGLSPRAPRSGLERSDFVHWHQAALRVVDP
Ga0222728_10499811	3300022508	Soil	MESSILSEVDDTSILRTELPAPLWLSSQLATGLSPRAPRSGLERSDFVHWHLSALRVVN
Ga0209419_10668831	3300027537	Forest Soil	MESSVLSEVDDTSILRTGLPTPLCLSSQLATGLSPRAPRSGLERSDFVLWHV
Ga0318538_104776091	3300031546	Soil	GLTVLVSLMESSILSEVDDTSILRTGLPSPLWPSSQLATGFSPLAPRSGLERSDFVHWH
Ga0318528_100210184	3300031561	Soil	VDDTSILRTGLPTPLWPSSQLATGLSPVAPRSGLERSDFVPWPLPMFYV
Ga0318528_104512912	3300031561	Soil	MESSILSEVDDTSILRTGLPSPLWPSSQLATGLSSLAPRSGLERSDFVH
Ga0318515_103808662	3300031572	Soil	VLVSLIESSILSEVDDTSILRTGLLTPLCLPSQLATGLSPRAPRSGLERSDFVLWHQA
Ga0310915_102125352	3300031573	Soil	SLMRSSILSEVDDTSILRTGLPTPLWPSSQLATGLSPLAPRTVVERSDFVHWHISNVR
Ga0310915_102254241	3300031573	Soil	LMESSILSEVDDTSILRTGLPSPLWPSSQLATGVSPLAPRSGLERSDFVHWQ
Ga0310915_104140181	3300031573	Soil	EVDDTSILRTGLPTPLWPSSQLATGLSPLAPRSGLERSDFVLCPFPAI
Ga0318561_105341242	3300031679	Soil	VLVSLTESSILSEVDDTSILRTGLPTPLWPSSQLATGLSPLAPRSGLERSDFVLWH
Ga0318574_100977563	3300031680	Soil	DTSILRTGLPTPLWPSSQLATGLSPVAPRSGLERSDFVPWPLPMFYV
Ga0318574_105427401	3300031680	Soil	LTVLVSLMESSILSEVDDTSILRTGLPTPLWPSSQLATGLSPLAPRSGLERSDFVRWH
Ga0318560_107418812	3300031682	Soil	LTVLVSLMESSILSEVDDTSILRVGLPSPLWPSSQLAAGLSPLTPRSGLERSDFVL
Ga0306917_101559341	3300031719	Soil	MESSILSEVDDTSILRTGLPSPLWPSSQLATGVSPLAPRSGLERSDFVHWQ
Ga0306917_101983431	3300031719	Soil	TVLVSLMESSILSEVDDTSILRTGLPSPLWPSSQLATGFSPLAPRSGLERSDFVHWH
Ga0306917_103504403	3300031719	Soil	LGSLMESSILSEVDDTSILRTGLPSPLWPSSQLAPGLSSLAPRSGLERSDFVHWH
Ga0318500_104021221	3300031724	Soil	LTVLVPLMESSILSEVDDTPILRTGLPLPLWPSSQLATGLSPLAPRSGLERSDFVHCGWRAAIG
Ga0318501_106142593	3300031736	Soil	RSRLTVLVSLMESSILSEVDDTSILRTGLPSPLGPSSQLAIGLSPLVPRSGLERSDFVHWHISAD
Ga0306918_101215224	3300031744	Soil	SGLTVLVSLMESSILSEVDDTSILTTGLPTPLWPSSQLATGPSPLAPRSGLERSDFVHWH
Ga0306918_101233411	3300031744	Soil	RSGLTVLVSLMESSILSEVDDTSILRTGLPSPLWPSSQLATGFSPLAPRSGLERSDFVHW
Ga0318494_106644101	3300031751	Soil	LTVLVSLMESSILSEVDDTSILRTRLPTPLWPSSQLATGLSPVAPRSGLERSDFVL
Ga0307477_107611361	3300031753	Hardwood Forest Soil	RAAMSSVMRCRSGLTVLVSLMESSILSEVDDTSILRPGPPRRYACPLKWLPASRLLPPRSGLERSDFVLWH
Ga0318537_100313713	3300031763	Soil	EVDDTSILRTGLPTPLWPSSQLATGLSPVAPRSGLERSDFVPWPLPMFYV
Ga0318537_101273611	3300031763	Soil	LMENSILSEVDDTSILRTELPSPLWPSSQLATGLSALAPRSGLERSDFVLWHQA
Ga0318554_100818633	3300031765	Soil	LMESSILSEVDDTSILRTGLPSPLWPSSQLATGFSPLAPRSGLERSDFVHWH
Ga0318521_101416043	3300031770	Soil	RSGLTVLVSLMESSILSEVDDTSILRTGLPSPLWPSSQLATGLSPLAPRSGLERSDFVHCHNRAAPCQARGGR
Ga0318521_103956441	3300031770	Soil	LMESSILSEVDDTSILRTGLPTPLWPSSQLATGLSPLAPRSGLERSDFVLCPFPAI
Ga0318521_108050111	3300031770	Soil	LTVLVSLMESSFLSEVDDTSILRTELPTPLWPSSQLATALSPLAPRSGLERSDFVLWHP
Ga0318521_109933941	3300031770	Soil	ILSEVDDTSILRTGLLTPLWSSSQLATCLSPLAPRSGLERSDFVHWH
Ga0318546_108544051	3300031771	Soil	MESSILSEVDDTSILRTGLPSPLGPSSQLATGLSPLVPRSGLVEPLY
Ga0318576_102209283	3300031796	Soil	LMESSILSEVDDTPILRTGLPLPLWPSSQLATGLSPLAPRSGLERSDFVHCGWRAAIG
Ga0318550_101031142	3300031797	Soil	GLTVLVSLMESSILSEVDDTSILTTGLPTPLWPSSQLATGPSPLAPRSGLERSDFVHWH
Ga0318568_100905961	3300031819	Soil	SILSEVDDTSILRVGLPSPLWPSSQLAAGLSPLTPRSGLERSDFVL
Ga0318568_103915141	3300031819	Soil	MESSILSEVDDTSILRTGLLTPLWSSSQLATGLSPLAPRSGLERSDFVQ
Ga0307473_101556321	3300031820	Hardwood Forest Soil	VDDTSILRTELPAPLWLSSQLATGLSPRAPRSGLERSDFVLWHQA
Ga0307473_111092082	3300031820	Hardwood Forest Soil	MESSILSEVDDTSILRTELSAPLWLSSQLASGLSPRAPRSGLERSDFVLWTK
Ga0318511_100817911	3300031845	Soil	VLVSLMESSILSEVDDTSILRTGLPTPLWPSSQLATGLSPLAPRSGLERSDFVLWHLRDD
Ga0306919_101976023	3300031879	Soil	RSGLTVLVSLMESSILSEVDDTSILRTGLPSPLWPSSQLATGVSPLAPRSGLERSDFVHW
Ga0306919_104593612	3300031879	Soil	SGLTVLVSLMESSILSEVDDTSILRTRLPSPLWPSSQLATGLSALAPRSGLERSDFVLWHQA
Ga0306925_107398853	3300031890	Soil	VDDTSILRTGLPTPLWPSSQLATGLSPVAPRSGLERSDFVPCP
Ga0306925_107944151	3300031890	Soil	LTVLVSLMESSILSEVDDTSILRTGLPSPLWPSSQLATGFSPLAPRSGLERSDFVHWH
Ga0306925_109469342	3300031890	Soil	SSILSEVDDTSILRTGLPSPLWPSSQLATGLSSLAPRSGLERSDFVLWH
Ga0318536_103288342	3300031893	Soil	VLGSLMESSILSEVDDTSILRTGLPSPLWPSSQLAPGLSSLAPRSGLERSDFVHWH
Ga0318522_102471212	3300031894	Soil	TVLVSLMESSILSEVDDTSILRTGLPTPLWPSSQLATGLSPLAPRSGLERSDFVLCPFPA
Ga0318551_103075411	3300031896	Soil	EVDDTSILRTGLPTPLWPSSQLATGLSPVAPRSGLERSDFVPCP
Ga0306923_101177791	3300031910	Soil	VSLMESSILSEVDDTSILRTGLPSPLWPSSQLAAGLSSLAPRSGLERSDFVQWHQA
Ga0306921_103501162	3300031912	Soil	GLTVLGSLMESSILSEVDDTSILRTDLPAPLWPSSQLATGLSPLAPRSGLERSDFVP
Ga0306921_117833272	3300031912	Soil	LVSLMESSILSEVDDTSILRTGLPSPLWPSSQLATGFSPLAPRSGLERSDFVHWH
Ga0310912_102314201	3300031941	Soil	EVDDTSILRTRLPTPLWPSSQLATGLSPVAPRSGLERSDFVL
Ga0310912_102914172	3300031941	Soil	RSGLTVLVSLMESSILSEVDDTSILTTGLPTPLWPSSQLATGPSPLAPRSGLERSDFVHW
Ga0310913_100964431	3300031945	Soil	GLTVLVSLMESSILSEVDDTSILRTGLPSPLWPSSQLATGVSPLAPRSGLERSDFVHWQ
Ga0310910_109591351	3300031946	Soil	GLTVLVPLMESSILSEVDDTSILRTGLPLPLWPSSQLATGLSPLAPRSGLERSDFVHWHVSDKLIMI
Ga0310909_1000431311	3300031947	Soil	LSEVDDTSILRTRLPTPLWPSSQLATGLSPVAPRSGLERSDFVL
Ga0310909_100544711	3300031947	Soil	TQRTDSFSALMESSILSEVDDTSILRTGLPTPLWPSSQLATGLSPLAPRSGLERSDFVRW
Ga0306926_102116731	3300031954	Soil	LSEVDDTSILRTGLPTPLWPSSQLATGLSPLAPRSGLERSDFMQWH
Ga0318531_102281932	3300031981	Soil	LSEVDDTSILRTGFPTPLCLSSQLATGLSPLAPRSGLERSDFVHWH
Ga0318531_105533821	3300031981	Soil	RLTVLVSLMESSILSEVDDTSILRTGLPSPLGPSSQLATGLSPLVPRSGLERSDFVHWHISAD
Ga0306922_103732291	3300032001	Soil	VVALVKAVWATSILRTGLASPLWPSSQLATGLAPLAPRSGLERSDFVQWH
Ga0306922_103774881	3300032001	Soil	EVDDTSILRTGLPTPLWPSSQLATGLSPLAPRTVVERSDFVHWHISNVR
Ga0306922_111931522	3300032001	Soil	VLVSLMESSILSEVDDTSILRTRLPSPLWPSSQLATGLSALAPRSGLERSDFVLWHQA
Ga0306922_114596413	3300032001	Soil	RSGLTVLVSLMESSILSEVDDTSILRTGLPSPLRPSSQLATGLSPLAPRSGLERSDFVPCPNPVVR
Ga0318569_102104712	3300032010	Soil	SILSEVDDTSILRTGLPSPLWPSSQLAPGLSSLAPRSGLERSDFVHWH
Ga0318575_102664992	3300032055	Soil	ILSEVDDTSILRTGLPTPLWLSSQLATGLSPLAPRSGLERSDFVHWHISNVR
Ga0318533_100963584	3300032059	Soil	SEVDDTSILRTGLPSPLWPSSQLATGVSPLAPRSGLERSDFVHWQ
Ga0318533_112213951	3300032059	Soil	LMESSIPSEVDDTSILRTGLPTPLWPSSQLATGLSPLTPRSGLERSDFVLWH
Ga0318553_106450592	3300032068	Soil	VSLMESSILSEVDDTSILRTGLPTPLWPSSQLATGLSPLAPRSGLERSDFVLCPFPAI
Ga0306924_1003574910	3300032076	Soil	SSILSEVDDTSILRTGLPLPLWPSSQLATGLSPLAPRSGLERSDFVHWHVSDKLIMI
Ga0306924_102753964	3300032076	Soil	SLMESSILSEVDDTSILRTGLPSPLWPSSQLATGVSPLAPRSGLERSDFVHWQ
Ga0306924_104395361	3300032076	Soil	EVDDTSILRTGLPSPLWPSSQLATGLSPVAPRSGLERSDFVHWH
Ga0306924_117454041	3300032076	Soil	RSGLTVLVSLMESSILSEVDDTSILRTRLPSPLWPSSQLATGLSALAPRSGLERSDFVLWHQA
Ga0318518_105578932	3300032090	Soil	RSGLTVLVSLMESSILSEVDDTSILRTGLPTPLWPSSQLATGLSPLAPRSGLERSDFMQW
Ga0318518_105808901	3300032090	Soil	SLMESSILSEVDDTSILRTGLPSPLGPSSQLATGLSPLVPRSGLERSDFVRWHSPAAPA
Ga0318577_101418122	3300032091	Soil	LTVLVSLMESSILSEVDDTSILRTGLPTPLWPSSQLATGLSPLAPRSGLERSDFVLCPFPAI
Ga0306920_1001103406	3300032261	Soil	SGLTVLVSLMRSSILSEVDDTSILRTGLPTPLWLSSQLATGLSPLAPRSGLERSDFVHWHISNVR
Ga0306920_1006186431	3300032261	Soil	QRTDSFSALMESSILSEVDDTSILRTGLPTPLWPSSQLATGLSPLAPRSGLERSDFMQWH
Ga0306920_1015921772	3300032261	Soil	MESSILSEVDDTSILRTDLPAPLWPSSQLATGLSPLAPRSGLERSDFVP
Ga0335077_117016271	3300033158	Soil	MESSILSEVDDTSILRTRLSIPLLLSSQLAPPYRLMPPRSGLERSDFVLWPDSAEPCTAAIRQLCGVL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059929

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences