Metagenome / Metatranscriptome Family F059934

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059934
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	70 residues
Representative Sequence	MASEYDDTSPGIPLWFKVGLVIVAAIAVWLAVGLLFATLRLALAFAGYVIVAFLAYQLGKWVGRSSKSDEP
Number of Associated Samples	109
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.20 %
% of genes near scaffold ends (potentially truncated)	25.56 %
% of genes from short scaffolds (< 2000 bps)	86.47 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (81.203 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (15.038 % of family members)
Environment Ontology (ENVO)	Unclassified (33.083 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.895 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.55% β-sheet: 0.00% Coil/Unstructured: 45.45%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF00296	Bac_luciferase	39.85
PF14579	HHH_6	8.27
PF01406	tRNA-synt_1e	4.51
PF01336	tRNA_anti-codon	3.76
PF03807	F420_oxidored	3.76
PF01139	RtcB	0.75
PF07973	tRNA_SAD	0.75
PF01024	Colicin	0.75
PF12680	SnoaL_2	0.75
PF07853	DUF1648	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	39.85
COG0018	Arginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	4.51
COG0143	Methionyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	4.51
COG0215	Cysteinyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	4.51
COG1690	RNA-splicing ligase RtcB, repairs tRNA damage	Translation, ribosomal structure and biogenesis [J]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.20 %
Unclassified	root	N/A	18.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.20 %
Unclassified	root	N/A	18.80 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.20 %
Unclassified	root	N/A	18.80 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	79.70 %
Unclassified	root	N/A	18.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	79.70 %
Unclassified	root	N/A	18.80 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.75 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	49.62 %
Unclassified	root	N/A	18.80 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	6.77 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	2.26 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	40.60 %
Unclassified	root	N/A	18.80 %
Actinobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium	6.77 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	2.26 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.26 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.50 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	30.83 %
Unclassified	root	N/A	18.80 %
Actinobacteria bacterium IMCC26256	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26256	9.77 %
Actinobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium	6.77 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.26 %
Microthrixaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Microthrixaceae	1.50 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.50 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.75 %
Ilumatobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae	0.75 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	30.83 %
Unclassified	root	N/A	18.80 %
Actinobacteria bacterium IMCC26256	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26256	9.77 %
Actinobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium	6.77 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.26 %
Candidatus Microthrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Microthrixaceae → Candidatus Microthrix	1.50 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.50 %
Ilumatobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	0.75 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	30.83 %
Unclassified	root	N/A	18.80 %
Actinobacteria bacterium IMCC26256	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26256	9.77 %
Actinobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium	6.77 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.26 %
Candidatus Microthrix parvicella	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Microthrixaceae → Candidatus Microthrix → Candidatus Microthrix parvicella	1.50 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.50 %
Ilumatobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	0.75 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573005\|GZGK9D402JNNOV	Not Available	511	Open in IMG/M
3300000956\|JGI10216J12902_107648306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1634	Open in IMG/M
3300001661\|JGI12053J15887_10284564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	812	Open in IMG/M
3300005168\|Ga0066809_10000958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Microthrixaceae → Candidatus Microthrix → Candidatus Microthrix parvicella	4160	Open in IMG/M
3300005172\|Ga0066683_10178374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1309	Open in IMG/M
3300005175\|Ga0066673_10641822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	615	Open in IMG/M
3300005176\|Ga0066679_10174841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1357	Open in IMG/M
3300005181\|Ga0066678_10139316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1508	Open in IMG/M
3300005332\|Ga0066388_100003591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	10122	Open in IMG/M
3300005332\|Ga0066388_104897541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	681	Open in IMG/M
3300005332\|Ga0066388_105563772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	638	Open in IMG/M
3300005363\|Ga0008090_14480784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	642	Open in IMG/M
3300005436\|Ga0070713_100076837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2837	Open in IMG/M
3300005444\|Ga0070694_100453534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1013	Open in IMG/M
3300005454\|Ga0066687_10215553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1056	Open in IMG/M
3300005454\|Ga0066687_10481979	Not Available	731	Open in IMG/M
3300005471\|Ga0070698_101088349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	748	Open in IMG/M
3300005540\|Ga0066697_10762595	Not Available	527	Open in IMG/M
3300005575\|Ga0066702_10379048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	861	Open in IMG/M
3300005576\|Ga0066708_10325829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	985	Open in IMG/M
3300005764\|Ga0066903_100308758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2512	Open in IMG/M
3300005764\|Ga0066903_100598003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1910	Open in IMG/M
3300005764\|Ga0066903_106392077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	615	Open in IMG/M
3300005981\|Ga0081538_10284573	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300006031\|Ga0066651_10403249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	729	Open in IMG/M
3300006049\|Ga0075417_10048142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1832	Open in IMG/M
3300006575\|Ga0074053_10312569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	510	Open in IMG/M
3300006576\|Ga0074047_11706415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	632	Open in IMG/M
3300006580\|Ga0074049_12399633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	553	Open in IMG/M
3300006791\|Ga0066653_10074939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1476	Open in IMG/M
3300006796\|Ga0066665_11103453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	605	Open in IMG/M
3300006797\|Ga0066659_10234579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1364	Open in IMG/M
3300006797\|Ga0066659_11774323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	522	Open in IMG/M
3300006800\|Ga0066660_10142387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1766	Open in IMG/M
3300006844\|Ga0075428_100141891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Microthrixaceae → Candidatus Microthrix → Candidatus Microthrix parvicella	2612	Open in IMG/M
3300006845\|Ga0075421_100178183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2645	Open in IMG/M
3300006845\|Ga0075421_101243938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	827	Open in IMG/M
3300006845\|Ga0075421_101833185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	651	Open in IMG/M
3300006846\|Ga0075430_100123889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2154	Open in IMG/M
3300006846\|Ga0075430_100936593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	714	Open in IMG/M
3300006847\|Ga0075431_101261472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	700	Open in IMG/M
3300006880\|Ga0075429_100536102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1026	Open in IMG/M
3300006903\|Ga0075426_10038401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3424	Open in IMG/M
3300006914\|Ga0075436_101183650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	577	Open in IMG/M
3300006953\|Ga0074063_11038791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	762	Open in IMG/M
3300006969\|Ga0075419_10332627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1030	Open in IMG/M
3300009100\|Ga0075418_10333770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1618	Open in IMG/M
3300009137\|Ga0066709_104596216	Not Available	505	Open in IMG/M
3300009147\|Ga0114129_10884868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1133	Open in IMG/M
3300009147\|Ga0114129_12536971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	612	Open in IMG/M
3300009789\|Ga0126307_10055429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3101	Open in IMG/M
3300009789\|Ga0126307_10157911	Not Available	1816	Open in IMG/M
3300009840\|Ga0126313_10015064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5012	Open in IMG/M
3300010037\|Ga0126304_10527447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	794	Open in IMG/M
3300010037\|Ga0126304_10991172	Not Available	573	Open in IMG/M
3300010038\|Ga0126315_10002179	Not Available	8024	Open in IMG/M
3300010039\|Ga0126309_10666440	Not Available	664	Open in IMG/M
3300010040\|Ga0126308_10036124	Not Available	2793	Open in IMG/M
3300010041\|Ga0126312_10145572	Not Available	1642	Open in IMG/M
3300010041\|Ga0126312_11250070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	548	Open in IMG/M
3300010042\|Ga0126314_10171105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1521	Open in IMG/M
3300010043\|Ga0126380_10096323	Not Available	1761	Open in IMG/M
3300010166\|Ga0126306_10858034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	735	Open in IMG/M
3300010322\|Ga0134084_10122367	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	851	Open in IMG/M
3300010398\|Ga0126383_10425415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1371	Open in IMG/M
3300010863\|Ga0124850_1024522	Not Available	1937	Open in IMG/M
3300010863\|Ga0124850_1024651	Not Available	1932	Open in IMG/M
3300010863\|Ga0124850_1024675	Not Available	1931	Open in IMG/M
3300012198\|Ga0137364_11309630	Not Available	539	Open in IMG/M
3300012200\|Ga0137382_10059156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2420	Open in IMG/M
3300012201\|Ga0137365_10140393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1816	Open in IMG/M
3300012201\|Ga0137365_10198085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26256	1502	Open in IMG/M
3300012203\|Ga0137399_11359598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	596	Open in IMG/M
3300012204\|Ga0137374_10080912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26256	3146	Open in IMG/M
3300012206\|Ga0137380_10874126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium	773	Open in IMG/M
3300012208\|Ga0137376_10179498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium	1828	Open in IMG/M
3300012353\|Ga0137367_10348729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium	1054	Open in IMG/M
3300012354\|Ga0137366_10498263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	880	Open in IMG/M
3300012355\|Ga0137369_10016171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26256	7173	Open in IMG/M
3300012355\|Ga0137369_10222465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium	1445	Open in IMG/M
3300012355\|Ga0137369_10795928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium	645	Open in IMG/M
3300012356\|Ga0137371_10183002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26256	1642	Open in IMG/M
3300012358\|Ga0137368_10284431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium	1126	Open in IMG/M
3300012360\|Ga0137375_10618293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium	899	Open in IMG/M
3300012362\|Ga0137361_11359551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	634	Open in IMG/M
3300012683\|Ga0137398_10226162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium	1240	Open in IMG/M
3300012924\|Ga0137413_11679840	Not Available	521	Open in IMG/M
3300012951\|Ga0164300_10908247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300012976\|Ga0134076_10453636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	579	Open in IMG/M
3300012986\|Ga0164304_11261830	Not Available	600	Open in IMG/M
3300015357\|Ga0134072_10093866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	912	Open in IMG/M
3300016341\|Ga0182035_11899371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300018053\|Ga0184626_10195560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	857	Open in IMG/M
3300018054\|Ga0184621_10196296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	724	Open in IMG/M
3300018078\|Ga0184612_10216909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26256	992	Open in IMG/M
3300018431\|Ga0066655_10773363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	652	Open in IMG/M
3300018433\|Ga0066667_10781876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	809	Open in IMG/M
3300018468\|Ga0066662_10423412	Not Available	1180	Open in IMG/M
3300018468\|Ga0066662_10762564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	933	Open in IMG/M
3300018469\|Ga0190270_10572587	Not Available	1094	Open in IMG/M
3300018469\|Ga0190270_13211862	Not Available	518	Open in IMG/M
3300018482\|Ga0066669_11131201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	706	Open in IMG/M
3300021559\|Ga0210409_10491273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1091	Open in IMG/M
3300025910\|Ga0207684_10138329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2092	Open in IMG/M
3300025922\|Ga0207646_10418531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1210	Open in IMG/M
3300025928\|Ga0207700_10477326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26256	1101	Open in IMG/M
3300026277\|Ga0209350_1041242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26256	1353	Open in IMG/M
3300026295\|Ga0209234_1143792	Not Available	853	Open in IMG/M
3300026301\|Ga0209238_1250730	Not Available	527	Open in IMG/M
3300026306\|Ga0209468_1144612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	636	Open in IMG/M
3300026325\|Ga0209152_10237087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	680	Open in IMG/M
3300026327\|Ga0209266_1094735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1319	Open in IMG/M
3300026538\|Ga0209056_10152676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1766	Open in IMG/M
3300026552\|Ga0209577_10173442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1678	Open in IMG/M
3300027681\|Ga0208991_1096761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26256	886	Open in IMG/M
3300027738\|Ga0208989_10115442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26256	911	Open in IMG/M
3300027880\|Ga0209481_10068547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26256	1673	Open in IMG/M
3300027909\|Ga0209382_10148838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26256	2713	Open in IMG/M
3300027909\|Ga0209382_10218495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2176	Open in IMG/M
3300027909\|Ga0209382_10917632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26256	920	Open in IMG/M
3300027909\|Ga0209382_11429282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26256	693	Open in IMG/M
3300028596\|Ga0247821_10958474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	571	Open in IMG/M
3300028711\|Ga0307293_10151942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	737	Open in IMG/M
3300028720\|Ga0307317_10226894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	631	Open in IMG/M
3300028784\|Ga0307282_10392775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	672	Open in IMG/M
3300028824\|Ga0307310_10262845	Not Available	832	Open in IMG/M
3300028881\|Ga0307277_10065999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1496	Open in IMG/M
3300028881\|Ga0307277_10345930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300031152\|Ga0307501_10041101	Not Available	997	Open in IMG/M
3300031199\|Ga0307495_10119692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	648	Open in IMG/M
3300032059\|Ga0318533_11248717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	543	Open in IMG/M
3300033550\|Ga0247829_10441067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium	1074	Open in IMG/M
3300034384\|Ga0372946_0602733	Not Available	532	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.21%
Host-Associated	Host-Associated	15.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.95%
Plants	Host-Associated → Plants	15.79%
Aquatic	Environmental → Aquatic	2.26%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.04%
Sediment	Environmental → Aquatic → Sediment	2.26%
Roots	Host-Associated → Plants → Roots	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.04%
Loam	Environmental → Terrestrial → Soil → Loam	14.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.26%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.60%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	21.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.02%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.51%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.01%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.26%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.50%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.75%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.75%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	15.04%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	15.04%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.02%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	9.02%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.76%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.26%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.50%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.75%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.75%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573005	Grass soil microbial communities from Rothamsted Park, UK - FG3 (Nitrogen)	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034384	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FG3_08803180	2189573005	Grass Soil	MASEYEDTSPGIPLWFKVGLVIVAAIAVWLAVGILFATLRVALAFAGYVIVAFLAYQLGKWVGRSSKADEP
JGI10216J12902_1076483063	3300000956	Soil	MASEYDDTSPGIPLWFKVGLVIVAAIAVWLAVGLLFATLRLALAFAGYVIVAFLGYQLGKWVGRSS
JGI12053J15887_102845642	3300001661	Forest Soil	MASEYDDRPPGIPLWFKVGLVIVAAIAVWIAVGLLFATLRLALAFAGYVIVAFLAYQLGKWVGRSSKSDEP*
Ga0066809_100009582	3300005168	Soil	MASEYEDTSPGIPLWFKVGLVIVAAIAVWLAVGILFATLRVALAFAGYVIVAFLAYQLGKWVGRSSKGDEP*
Ga0066683_101783742	3300005172	Soil	MASEYDDRPPGIPLWFKVGLVIVAAIAVWLAVGLLVTTLRLALAFAGYVVVAFLAYQLGKWVGRSSKSDER*
Ga0066673_106418221	3300005175	Soil	MASEYDDRPPGIPLWFKVGLVIVAAIAVWLAVGLLVSTLRLALAFAGYVIVAFLAYQIGKWVGRSSKSDEP*
Ga0066679_101748412	3300005176	Soil	MASEYDDRPPGIPLWFKVGLVIVAAIAVWLAVGLLVTTLRLALAFAGYVVVAFLAYQLGKWVGRSSKSDEP*
Ga0066678_101393162	3300005181	Soil	MASEYDDRPPGIPLWFKVGLVIVAAIAVWLAVGLLVTTLRLALAFAGYVIVGFLAYQLGKWVGRSSKSDEP*
Ga0066388_1000035919	3300005332	Tropical Forest Soil	MGSDYDDTPPGIPLWFKIGLVIVAAIGVWLAVGILFATLRVALAFAGYVIVAFLAYQFGKWVGHSSAREEP*
Ga0066388_1048975412	3300005332	Tropical Forest Soil	MASEYDDRPPGIPLWFKIGLVIVAAIAVWLAVGIVFATLRVALAFAGYVIVAFLAYQFGKWVGRNSARNEP*
Ga0066388_1055637721	3300005332	Tropical Forest Soil	MASEHDDRPPGIPLWFKVGLVIVAAIGVWLAVGIVFATLRVALAFAGYVIVAFLAYQFGKWVGRSSARHEP*
Ga0008090_144807842	3300005363	Tropical Rainforest Soil	MASDDDETSPGIPLWFKVGLVIVAAIGVWLAVGVLFATLRVALAFAGYVIVAFLAYQFGKWVGRSSARDEP*
Ga0070713_1000768372	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MASEYDDTSPGIPLWFKVGLVIVAAIAVWLAVGLLVTTLRLALAFAGYVVVAFLAYQFGKWVGRSSRGDEP*
Ga0070694_1004535341	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	YDDRPPGIPLWFKVGLVIVAAIAVWLAVGLLVTTLRLALAFAGYVVVAFLAYQLGKWVGRSSKSDEP*
Ga0066687_102155531	3300005454	Soil	RRSVDAMASEYDQRPPAIPLWFKVGLVIVAAIAVWLAVGFLFATLRLALAFAGYVVVAFLAYQLGKWVGRSSRSDEP*
Ga0066687_104819791	3300005454	Soil	MASEYDDRPPGIPLWFKVGLVIVAAIAVWLAVGLLVTTLHLALAFAGYVVVAFLAYQLGKWVGRS
Ga0070698_1010883492	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MASEYDDTSPGIPLWFKVGLVIVAAIGVWLAIGLLVTTLRLALAFAGYVVVAFLAYQFGKWVGRSSRGDEP*
Ga0066697_107625951	3300005540	Soil	MASEYDDGPPGIPLWFKVGLVIVAAIAVWLAVGLLVTTLRLALAFAGYVVVAFLAYQLGKWVGRSSKSDEP*
Ga0066702_103790481	3300005575	Soil	RSVDAMASEYDDRPPGIPLWFKVGLVIVAAIAVWLAVGLLVSTLRLALAFAGYVIVAFLAYQIGKWVGRSSKSDEP*
Ga0066708_103258292	3300005576	Soil	MASEYDDRPPGIPLWFKVGLVIVAAIAVWLAVGLLVTTLRLALAFAGYVIVAFLAYQIGKWVGRSSKSDEP*
Ga0066903_1003087581	3300005764	Tropical Forest Soil	DTSPGIPLWFKVGLVIVAAIGVWLAVGILFATLRVALAFAGYVIVAFLAYQFGKWVGRNSGRDEP*
Ga0066903_1005980032	3300005764	Tropical Forest Soil	MASDYDDTSPGIPLWFKVGLVIVAAIAVWVAVGILFATLRVALAFAGYVIVAFLAYQFGKWVGRNSARDEP*
Ga0066903_1063920772	3300005764	Tropical Forest Soil	MASDYDDTSPGIPWWFKIGLVIVAAIAVWVAVGLLFATLRLALAFAGYVIVAFLAYQFGKWVGRNSARDEP*
Ga0081538_102845732	3300005981	Tabebuia Heterophylla Rhizosphere	MASEYEEAPPRIPLWFKVGLVIVAAIAVWLAVGLLWTTLRLALAFAGYVIVAFLAYQVGKWVGRNSAGDE*
Ga0066651_104032492	3300006031	Soil	LWFKVGLVIVAAIAVWLAVGLLVTTLRLALAFAGYVVVAFLAYQLGKWVGRSSKSDEP*
Ga0075417_100481422	3300006049	Populus Rhizosphere	VASEYDDTSPGIPLWFKVGLVIVAAIAVWLAVGLLVTTLRLALAFAGYVVVAFLAYQFGKWVGRSSRGDEP*
Ga0074053_103125691	3300006575	Soil	MASEYDDTSPGIPLWFKVGLVIVAAIGVWLAIGLLFATLRLALAFAGYVIVAFLAYQFGKWVGRSSKSDEP*
Ga0074047_117064152	3300006576	Soil	MASEYDDAPPGIPLWFKVGLVIVAAIAVWLAVGILFATLRVALAFAGYVIVAFLAYQLGKWVGRSSKGDEP*
Ga0074049_123996332	3300006580	Soil	MASEYDDTSPGIPMWFKVGLVIVAAIGVWLAIGLLFATLRLALAFAGYVIVAFLAYQLGKWVGRSSKGDEP*
Ga0066653_100749392	3300006791	Soil	MASEYDDTSPGIPLWFKVGLVIVAAIAVWLAVGLLFATLRLALAFAGYVIVAFLAYQLGKRVGRSSKSDEP*
Ga0066665_111034532	3300006796	Soil	MASEYDDRPPGIPLWFKVGLVIVAAIAVWLAVGLLVTTLRLALAFAGYVVVAFLAYQLGKWVGRSSKNDAP*
Ga0066659_102345792	3300006797	Soil	GIPLWFQVGLVIVAAIAVWLAVGLLVTTLRLALAFAGYVIVGFLAYQLGKWVGRSSKSDEP*
Ga0066659_117743232	3300006797	Soil	MASEYDQRPPAIPMWFKVGLVIVAAIAVWLAVGFLFATLRLALAFAGYVIVAFLAYQIGKWVGRSSKSDEP*
Ga0066660_101423871	3300006800	Soil	DAMASEYEDRPPGIPLWFKVGLVIVAAIAVWLAVGLLVSTLRLALAFAGYVIVAFLAYQIGKWVGRSSKSDEP*
Ga0075428_1001418912	3300006844	Populus Rhizosphere	MASEYDSSPGIPLWFKVGLVIVAAIAVWIAVGFLFATLRLALAFAGYVVVAFLFYQLGKWVGRSSNNDEP*
Ga0075421_1001781833	3300006845	Populus Rhizosphere	LASEYDDAPPGIPLWFKVGLVIVAAFAVWLAVGLLFATLRVALAFAGYIIVAFLAYQVGKWVGRSSAGPEP*
Ga0075421_1012439382	3300006845	Populus Rhizosphere	MASEYDDRPPGIPLWFKVGLVIVAAIGVWLAVGLLFATLRLALAFAGYLVVAFLFYQLGKWVGRSSNNDEP*
Ga0075421_1018331851	3300006845	Populus Rhizosphere	EYDDRPPGIPLWFKVGLVIVAAIAVWLAVGLLFATLRLAIAFAGYVVVAFLFYQFGKWVGRSSNNDEP*
Ga0075430_1001238893	3300006846	Populus Rhizosphere	MASEYDDRPPGIPLWFKVGLVIVAAIAVWLAVGLLFATLRLAIAFAGYVVVAFLFYQFGKWVGRSSNNDEP*
Ga0075430_1009365931	3300006846	Populus Rhizosphere	MASEYDDRPPGIPLWFKVGLVIVAAIGVWLAVGLLFATLRLALAFAGYVVVAFLFYQLGKWVGRSSNNDEP*
Ga0075431_1012614721	3300006847	Populus Rhizosphere	MASEYDSSPGIPLWFKVGLVIVAAIAVWIAVGFLFATLRLALAFAGYVVVAFLFYQLGKWVGRSSNN
Ga0075429_1005361022	3300006880	Populus Rhizosphere	MASEYDSSPGIPLWFKVGLVIVAAIAVWIAVGLLFATLRLALAFAGYVVVAFLFYQLGKWVGRSPDNDEP*
Ga0075426_100384011	3300006903	Populus Rhizosphere	SRRSADAMASEYDDTSPGIPLWFKVGLVIVAAIAVWLAVGLLVTTLRLALAFAGYVVVAFLAYQFGKWVGRSSRGDEP*
Ga0075436_1011836501	3300006914	Populus Rhizosphere	MASEYDDTSPGIPLWFKVGLVIVAAIAVWLAVGLLVTTLRLALAFAGYVVVAFLAYQFGKWVGRSSRGD
Ga0074063_110387912	3300006953	Soil	MASQYDDTSPGIPLWFKVGLVIVAAIGVWLAIGLLFATLRLALAFAGYVIVAFLAYQFGKWVGRSSKSDEP*
Ga0075419_103326272	3300006969	Populus Rhizosphere	MASEYDSSPAIPLWFKVGLVIVAAIAVWVAVGLLFATLRLALAFAGYVVVAFLFYQLGKWVGRSSINDEP*
Ga0075418_103337702	3300009100	Populus Rhizosphere	MASEYDSSPGIPLWFKVGLVIVAAIAVWIAVGFLFATLRLALAFAGYVVVAFLFYQLGKWVGRSPDNDEP*
Ga0066709_1045962161	3300009137	Grasslands Soil	PLWFKVGMVIVAAIAVWLAVGILFATLRVALAFAGYIIVAFLAYQVGKWVGRNSSGPEP*
Ga0114129_108848682	3300009147	Populus Rhizosphere	MASEYDSSPGIPLWFKVGLVIVAAIAVWIAVGFLFATLRLALAFAGYVVVAFLFYQLGKWVGRNSNNDEP*
Ga0114129_125369711	3300009147	Populus Rhizosphere	DRPPGIPLWFKVGLVIVAAIGVWLAVGLLFATLRLALAFAGYLVVAFLFYQLGKWVGRSSNNDEP*
Ga0126307_100554292	3300009789	Serpentine Soil	MASEYHSSPGIPLWFKVGLVIVAAIAVWLAIGLLFATLRLAIAFAGYVIVAFLAYQLGKWVGRSSKSDEP*
Ga0126307_101579112	3300009789	Serpentine Soil	VASEYDGAPGVPWWFKVGLVIVAAIAVWLAVGLLFATLRLALAFAGYVIVAFLAYQLGKWVGRNSAGDEP*
Ga0126313_100150643	3300009840	Serpentine Soil	MATEYDGTPPGIPWWFKVGLVIVAAIAVWLAVGLLFATLRLAVAFAGYVIVAFLFYQIGKWVGRNSKSDEP*
Ga0126304_105274472	3300010037	Serpentine Soil	MATEYDGTPPGIPWWFKVGLVVVAAIAVWLAVGLLFATLRLALAFAGYVIVAFLFYQIGKWVGRNSKSDEP*
Ga0126304_109911722	3300010037	Serpentine Soil	MASEYHSSPGIPLWFKVGLVIVAAIAVWLAVGLLFATLRLALAFAGYVIVAFLFYQIGKSVGHNSGGDEP*
Ga0126315_100021792	3300010038	Serpentine Soil	MATEYDGAPPGIPWWFKVGLVVVAAIAVWLAVGLLFATLRLALAFAGYVIVAFLFYQIGKWVGRNSKSDEP*
Ga0126309_106664402	3300010039	Serpentine Soil	VASDYDDTPPGIPLWFKVGLVIVAAFAVWLAIGLLFATLRVALAFAGYIIVAFLAYQVGKWVGRSSAGPEP*
Ga0126308_100361242	3300010040	Serpentine Soil	MASEYHSSPGIPLWFKVGLVIAAAIAVWLAIGLLFATLRLALAFAGYVIVAFLAYQLGKWVGRSSKSDEP*
Ga0126312_101455723	3300010041	Serpentine Soil	MATEYDGTSPGIPWWFKVGLVIVAAIAVWLAVGLLFATLRLAVAFAGYVIVAFLFYQLGKWVGRSSKSDEP*
Ga0126312_112500702	3300010041	Serpentine Soil	VASEYDSSPGVPWWFKVGLVIVAAIAVWLAVGLLFATLRLALAFAGYVIVAFLAYQLGKWVGRSSKSDEP*
Ga0126314_101711052	3300010042	Serpentine Soil	MASEYDGTPPGIPWWFKVGLVIVAAIAVWLAVGLLFATLRLALAFAGYVIVAFLFYQIGKWVGNNSGGDEP*
Ga0126380_100963233	3300010043	Tropical Forest Soil	VASDDDTSPGIPLWFKVGLVIVAAIGVWLAVGIVFATLRVALAFAGYVIVAFLAYQFGKWVGRNSARDVS*
Ga0126306_108580342	3300010166	Serpentine Soil	MASEYDGTPPGIPWWFKVGLVIVAAIAVWLAVGLLFATLRLALAFAGYVIVAFLFYQIGKWVGHNSGGDEP*
Ga0134084_101223673	3300010322	Grasslands Soil	MAYEYEDRPPGIPLWFKVGLVIVAAIAVWLAVGLLVTTLRLALAFAGYVVVAFLAYQLGKWVGRSSKSDEP*
Ga0126383_104254152	3300010398	Tropical Forest Soil	MADYDDTSPGIPLWFKVGLVIVAAIGVWLAVGILFATLRVALAFAGYVIVAFLAYQFGKWVGRNSGRDEP*
Ga0124850_10245221	3300010863	Tropical Forest Soil	MASDYDDTSPGIPLWFKVGLVIVAAIAVWVAVGILFATLRVALAFAGYVIVAFLAYQFGKWVGRNSARDEP
Ga0124850_10246514	3300010863	Tropical Forest Soil	MASDYDDTSPGIPLWFKVGLVIVAAIAVWVAVGILFATLRVALAFAGYVIVAFLAYQFGKWVGRNSARDE
Ga0124850_10246751	3300010863	Tropical Forest Soil	MASDYDDTSPGIPLWFKVGLVIVAAIAVWVAVGILFATLRVALAFAGYVIVAFLAYQFGKWVGRNSARD
Ga0137364_113096301	3300012198	Vadose Zone Soil	MASEYDERPPAIPLWFKVGLVIVAAIAVWLAVGFLFATLRLALAFAGYVVVAFLAYQLGKWVGRSSRSDEP*
Ga0137382_100591561	3300012200	Vadose Zone Soil	MASEYDERPPAIPLWFKVGLVIVAAIAVWLAVGLLVSTLRLALAFAGYVIVAFLAYQIGKWVGRSSK
Ga0137365_101403932	3300012201	Vadose Zone Soil	VASEYDNTSPGIPLWFKVGLVIVAAIAVWLAVGFLFATLRLALAFAGYVVVAFLAYQLGKWVGRSSRSDEP*
Ga0137365_101980853	3300012201	Vadose Zone Soil	MASEYGDRPPGTPLWFKVGLVIVAAIAVWLAVGLLVTTLRLALAFAGYVVVAFLAYQLGKWVGRSSKSDEP*
Ga0137399_113595982	3300012203	Vadose Zone Soil	MESEYDDTSPGIPLWFKVGLVIVAAIAVWVAVGLLFATLRLALAFAGYVVVAFLAYQLGKWVGRSSKSDEP*
Ga0137374_100809122	3300012204	Vadose Zone Soil	MASNDSAPPGIPWWFKVGLVIVAAIAVWLAIGLLFATLRLALAFAGYVIVAFLAYQIGKWVGRSSAGEEP*
Ga0137380_108741262	3300012206	Vadose Zone Soil	MASEYDDRPPGIPLWFKVGLVIVAAIGVWLAVGLLFATLRLALAFAGYVVVAFLAYQLGKWVGRSSRSDEP*
Ga0137376_101794982	3300012208	Vadose Zone Soil	MASEYDERPPAIPLWFKVGLVIVAAIAVWLAVGFLFATLRLALAFGGYVVVAFLAYQLGKWVGRSSRSDEP*
Ga0137367_103487292	3300012353	Vadose Zone Soil	MASEYDSSPGIPLWFKVGLVIVAAIAVWLAVGLIFATLRLALAFAGYVIVAFLAYQLGKWVGRSSKNDEN*
Ga0137366_104982631	3300012354	Vadose Zone Soil	SRRSVDAMASEYDDRPPGIPLWFKVGLVIVAAIAVWLAVGLLVTTLRLALAFAGYVIVAFLAYQIGKWVGRSSKSDEPYT*
Ga0137369_100161716	3300012355	Vadose Zone Soil	MASEYEGAPPGIPWWFKVGLVIVAAIAVWLAVGLLLTTLRLALAFAGYVIVAFLAYQIGKWVGRSSNEP*
Ga0137369_102224652	3300012355	Vadose Zone Soil	MASEYDNTSPGIPLWFKVGLVIVAAIAVWLAVGLLFATLRLALAFAGYVVVAFLFYQLGKWVGRSSKSDEP*
Ga0137369_107959282	3300012355	Vadose Zone Soil	MASEYDDTSPGIPLWFKVGLVIVAAIAVWLAVGLLFATLRLALAFAGYVIVAFLAYQLGKWVGRSSKNDEN*
Ga0137371_101830023	3300012356	Vadose Zone Soil	MASEYDSSPPGIPLWFKVGLVIVAAIAVWLAVGLLVTTLRLALAFAGYVVVAFLAYQLGKWVGRSSKSDER*
Ga0137368_102844312	3300012358	Vadose Zone Soil	MASEEDSSRGVRRWLRVGQLIVDAIAVWLAVGLIFATLRLALAFAGYVIVAFLAYQLGKWVGRSSKNDEN*
Ga0137375_106182932	3300012360	Vadose Zone Soil	MASEYDDTSPGIPLWFKVGLVIVAAIAVWLAVGLLFATLRLALAFAGYVIVAFLAYQLGKWVGRSSKSDEP*
Ga0137361_113595512	3300012362	Vadose Zone Soil	MASEYDDTSPGIPLWFKVGLVIVAAIAVWLAVGLLFATLRLALAFAGYVVVAFLAYQLGKWVGRSSKSDEP*
Ga0137398_102261623	3300012683	Vadose Zone Soil	MASEYDDTSPGIPLWFKVGLVIVAAIAVWVAVGLLFATLRLALAFAGYVVVAFLAYQLGKWVGRSSKSDE
Ga0137413_116798402	3300012924	Vadose Zone Soil	MASEYDDTSPGIPLWFKVGLVIVAAIAVWVAVGLLFATLRLALAFAGYVVVAFLAYQLGKWVGRSSKSDEP*
Ga0164300_109082472	3300012951	Soil	MASEYEDRPPGIPLWFKVGLVIVAAIGVWLAVGLLVTTLRLALAFAGYVIVAFLAYQLGKWVGRSSSSDEP*
Ga0134076_104536361	3300012976	Grasslands Soil	MASEYDDRPPGIPLWFKVGLVIVAAIAVWLAVGLLVTTLRLALAFAGYVVVAFLAYQFGKWVGRSSKSDEP*
Ga0164304_112618302	3300012986	Soil	MASEYDDTSPGIPLWFKVGLVIVAAIGVWLAVGLLVTTLRLALAFAGYVIVAFLAYQLGKWVGRSSSSDEP*
Ga0134072_100938661	3300015357	Grasslands Soil	RKPVDPMASEYDDRPPGIPLWFKVGLVIVAAIAVWLAVGLLVTTLRLALAFAGYVVVAFLAYQLGKWVGRSSKSDEP*
Ga0182035_118993711	3300016341	Soil	DDRPPGIPLWFKIGLVIVAAIAVWLAVGIVFATLRVALAFAGYVIVAFLAYQFGKWVGRNSARNEP
Ga0184626_101955602	3300018053	Groundwater Sediment	MASEYDDTSPGIPLWFKVGLVIVVAIGVWLAVGLLFATLRLALAFAGYVVVAFLFYQLGKWVGRSSNRDEP
Ga0184621_101962962	3300018054	Groundwater Sediment	MASEYDDTSPGIPLWFKVGLVIVVAIGVWIAVGLLFATLRLALAFAGYVIVAFLAYQLGKWVGRSSKSDEP
Ga0184612_102169092	3300018078	Groundwater Sediment	MASEYDDTSPGIPLWFKVGLVIVVAIGVWIAVGLLFATLRLALAFAGYVIVAFLAYQLGKWVGRSSNRDEP
Ga0066655_107733632	3300018431	Grasslands Soil	MAYEYDDRPPGIPLWFKVGLVIVAAIAVWLAVGLLVTTLRLALAFAGYVVVAFLAYQLGKWVGRSSKDDAP
Ga0066667_107818762	3300018433	Grasslands Soil	MASEYDDRPPGIPLWFKVGLVIVAAIAVWLAVGLLVTTLRLALAFAGYVVVAFLAYQLGKWVGRSSRSDEP
Ga0066662_104234121	3300018468	Grasslands Soil	MASEYDDRPPSIPLWFKVGLVIVAAITVWLAVGLLVTTLRLALAFAGYVIVGFLAYQLGKWVGRSSKSDEP
Ga0066662_107625642	3300018468	Grasslands Soil	DAMASEYDDTSPGIPLWFKVGLVIVAAIAVWLAVGLLFATLRLALAFAGYVVVAFLAYQLGKWVGRSSKSDEP
Ga0190270_105725872	3300018469	Soil	MASEYDDTSPGIPLWFKVGLVIVVAIGVWLAVGLLFATLRLALAFAGYVIVAFLAYQLG
Ga0190270_132118622	3300018469	Soil	MASEYDDTSPGIPLWFKVGLVIVAAVAVWLAVGLLFATVRVALAFAGYVIVAFLAYQVGKWVGRSSPSDEP
Ga0066669_111312012	3300018482	Grasslands Soil	MAYEYDDRPPGIPLWFKVGLVIVAAIAVWLAVGLLVTTLRLALAFAGYVVVAFLAYQLGKWVGRSSRSDEP
Ga0210409_104912731	3300021559	Soil	DPMASEYEDRPPGIPLWFKVGLVIVAAIGVWLAVGLLVTTLRLALAFAGYVIVAFLAYQIGKWVGRSSNSDEL
Ga0207684_101383291	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MASEYDDRPPGIPLWFKVGLVIVAAIAVWLAVGLLVTTLRLALAFAGYVVVAFLAYQLGKWVGRSSKSDEP
Ga0207646_104185313	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MASEYDDRPPGIPLWFKVGLVIVAAIGVWLAIGLLVTTLRLALAFAGYVVVAFLAYQFGK
Ga0207700_104773262	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MASEYDDTSPGIPLWFKVGLVIVAAIAVWLAVGLLVTTLRLALAFAGYVVVAFLAYQFGKWVGRSSRGDEP
Ga0209350_10412422	3300026277	Grasslands Soil	MASEYDDRPPGIPLWFKVGLVIVAAIAVWLAVGLLVTTLRLALAFAGYVIVGFLAYQLGKWVGRSSKSDEP
Ga0209234_11437922	3300026295	Grasslands Soil	MASEYDDTSPGIPLWFKVGLVIVAAIAVWLAVGLLFATLRLALAFAGYVVVAFLAYQLGKWVGRSSKSDEP
Ga0209238_12507302	3300026301	Grasslands Soil	MASEYDDTSPGIPLWFKVGLVIVAAIAVWLAVGLLVSTLRLALAFAGYVIVAFLAYQIGKWVGRSSKSDEP
Ga0209468_11446121	3300026306	Soil	MASEYDDRPPGIPLWFKVGLVIVAAIAVWLAVGLLVTTLRLALAFAGYVVVAFLAYQLGKWVGRS
Ga0209152_102370872	3300026325	Soil	WFKVGLVIVAAIAVWLAVGLLVTTLRLALAFAGYVVVAFLAYQLGKWVGRSSKSDEP
Ga0209266_10947352	3300026327	Soil	MASEYDDRPPGIPLWFKVGLVIVAAIAVWLAVGLLVTTLRLALAFAGYVVVAFLAYQLGKWVGRSSKSDER
Ga0209056_101526762	3300026538	Soil	MASEYDDRPPGIPLWFKVGLVIVAAIAVWLAVGLLVTTLRLALAFAGYVVVAFLAYQLGKWVGRSSKNDAP
Ga0209577_101734422	3300026552	Soil	MASEYDDRPPGIPLWFKVGLVIVAAIAVWLAVGLLVSTLRLALAFAGYVIVAFLAYQIGKWVGRSSNSDEP
Ga0208991_10967612	3300027681	Forest Soil	MASEYGDRPPGIPLWFKVGLVIVVAFGVWLAVGVLFTTLRIAFAFAGYVIVAFLAYQVGKWVGRSSARPEP
Ga0208989_101154422	3300027738	Forest Soil	MASEYDDRPPGIPLWFKVGLVIVAAIAVWIAVGLLFATLRLALAFAGYVIVAFLAYQLGKWVGRSSKSDEP
Ga0209481_100685472	3300027880	Populus Rhizosphere	MASEYDSSPGIPLWFKVGLVIVAAIAVWLAVGLLVTTLRLALAFAGYVVVAFLAYQFGKWVGRSSRGDEP
Ga0209382_101488382	3300027909	Populus Rhizosphere	MASEYDSSPGIPLWFKVGLVIVAAIAVWIAVGFLFATLRLALAFAGYVVVAFLFYQLGKWVGRSPDNDEP
Ga0209382_102184952	3300027909	Populus Rhizosphere	LASEYDDAPPGIPLWFKVGLVIVAAFAVWLAVGLLFATLRVALAFAGYIIVAFLAYQVGKWVGRSSAGPEP
Ga0209382_109176322	3300027909	Populus Rhizosphere	MASEYDDRPPGIPLWFKVGLVIVAAIAVWLAVGLLFATLRLAIAFAGYVVVAFLFYQFGKWVGRSSNNDEP
Ga0209382_114292822	3300027909	Populus Rhizosphere	MASEYDDRPPGIPLWFKVGLVIVAAIGVWLAVGLLFATLRLALAFAGYLVVAFLFYQLGKWVGRSSNNDEP
Ga0247821_109584742	3300028596	Soil	MASEYDSSPVIPLWFKVGLVIVAAIAVWIAVGLLFATLRLALAFAGYVVVAFLFYQLGKWVGRNSNNDEP
Ga0307293_101519422	3300028711	Soil	MASEYDDTSPGIPLWFKVGLVIVVAIGVWIAVGLLFATLRLALAFAGYVIVAFLAYQVGKWVGRSSNSDEP
Ga0307317_102268941	3300028720	Soil	RQADAMASEYDDTSPGIPLWFKVGLVIVVAIGVWIAVGLLFATLRLALAFAGYVIVAFLAYQLGKWVGRSSNRDEP
Ga0307282_103927752	3300028784	Soil	MASEYDDTSPGIPLWFKVGLVIVVAIGVWIAVGLLFATLRLAIAFAGYVIVAFLAYQLGKWVGRSSNRDEP
Ga0307310_102628451	3300028824	Soil	MASEYDDTSPGIPLWFKVGLVIVVAIGVWIAVGLLFATLRLALAFAGYVIVAFLAYQLGKWVGRNS
Ga0307277_100659993	3300028881	Soil	MASEYDDTSPGIPLWFKVGLVIVVAIGVWIAVGLLFATLRLALAFAGYVIVAFLAYQVGK
Ga0307277_103459301	3300028881	Soil	IPLWFKVGLVIVVAIGVWIAVGLLFATLRLALAFAGYVIVAFLAYQLGKWVGRSSNRDEP
Ga0307501_100411012	3300031152	Soil	MASEYDDTSPGIPLWFKVGLVIVAAIAVWLAVGLLFATLRLALAFAGYVIVAFLAYQLGK
Ga0307495_101196922	3300031199	Soil	MASEYDDTSPGIPLWFKVGLVIVVAIGVWIAVGLLFATLRLALAFAGYVIVAFLAYQFGKWVGRSSKSDEP
Ga0318533_112487172	3300032059	Soil	MASEYDDRPPGIPLWFKIGLVIVAAIAVWLAVGIVFATLRVALAFAGYVIVAFLAYQFGKWVGRNSARNEP
Ga0247829_104410672	3300033550	Soil	MASEYDSSPGIPLWFKVGLVIVAAIAVWIAVGLLFATLRLALAFAGYVVVAFLFYQLGKWVGRSSNNDEP
Ga0372946_0602733_206_421	3300034384	Soil	VASEYGDRPPGIPLWFKVGLVIVVALGVWLAVGVLFTTLRIAFAFAGYVIVAFLAYQVGKWVGRSSARPEP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059934

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences