Metagenome Family F059999

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059999
Family Type	Metagenome
Number of Sequences	133
Average Sequence Length	107 residues
Representative Sequence	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHSGNGRAQAGTRAKIVDEPLDDSDPTFRGTVYALVVITGFCSAALGVGAVFGNN
Number of Associated Samples	117
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	85.71 %
% of genes near scaffold ends (potentially truncated)	34.59 %
% of genes from short scaffolds (< 2000 bps)	93.23 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (67.669 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (13.534 % of family members)
Environment Ontology (ENVO)	Unclassified (24.060 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (40.602 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.33% β-sheet: 0.00% Coil/Unstructured: 41.67%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF04392	ABC_sub_bind	9.02
PF07369	DUF1488	3.01
PF00144	Beta-lactamase	1.50
PF03401	TctC	0.75
PF04226	Transgly_assoc	0.75
PF12680	SnoaL_2	0.75
PF09948	DUF2182	0.75
PF05656	DUF805	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	9.02
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.50
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.50
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.50
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.75
COG3152	Uncharacterized membrane protein YhaH, DUF805 family	Function unknown [S]	0.75
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.67 %
All Organisms	root	All Organisms	32.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.67 %
cellular organisms	root	All Organisms → cellular organisms	32.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.67 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	25.56 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.50 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.67 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	14.29 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.26 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.50 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.67 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9.02 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.26 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.75 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	0.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.67 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.51 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2.26 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.50 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.75 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.75 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.75 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	0.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.67 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.76 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	2.26 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.50 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	0.75 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.75 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.75 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	0.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.67 %
Labilitrichaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae	2.26 %
Rhodoplanes piscinae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes piscinae	1.50 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.75 %
Bradyrhizobium guangxiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium guangxiense	0.75 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	0.75 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.75 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.75 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	0.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.67 %
Labilithrix	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix	2.26 %
Rhodoplanes piscinae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes piscinae	1.50 %
Bradyrhizobium sp. C-145	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. C-145	0.75 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.75 %
Bradyrhizobium guangxiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium guangxiense	0.75 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	0.75 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.75 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	0.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.67 %
Labilithrix luteola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix → Labilithrix luteola	2.26 %
Rhodoplanes piscinae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes piscinae	1.50 %
Bradyrhizobium sp. C-145	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. C-145	0.75 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.75 %
Bradyrhizobium guangxiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium guangxiense	0.75 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	0.75 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.75 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	0.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1000091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	10490	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1046564	Not Available	668	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10119770	Not Available	550	Open in IMG/M
3300000816\|AF_2010_repII_A10DRAFT_1000295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4332	Open in IMG/M
3300005093\|Ga0062594_100094615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1757	Open in IMG/M
3300005295\|Ga0065707_10730752	Not Available	626	Open in IMG/M
3300005332\|Ga0066388_100414882	All Organisms → cellular organisms → Bacteria	1990	Open in IMG/M
3300005332\|Ga0066388_101149923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1320	Open in IMG/M
3300005337\|Ga0070682_101836097	Not Available	530	Open in IMG/M
3300005339\|Ga0070660_101234257	Not Available	634	Open in IMG/M
3300005354\|Ga0070675_101802586	Not Available	565	Open in IMG/M
3300005355\|Ga0070671_100970745	All Organisms → cellular organisms → Bacteria → Proteobacteria	744	Open in IMG/M
3300005366\|Ga0070659_101514802	Not Available	598	Open in IMG/M
3300005434\|Ga0070709_10315664	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300005437\|Ga0070710_10460490	Not Available	864	Open in IMG/M
3300005455\|Ga0070663_100378389	All Organisms → cellular organisms → Bacteria → Proteobacteria	1152	Open in IMG/M
3300005457\|Ga0070662_100947784	Not Available	736	Open in IMG/M
3300005457\|Ga0070662_101749819	Not Available	537	Open in IMG/M
3300005547\|Ga0070693_101538220	Not Available	521	Open in IMG/M
3300005548\|Ga0070665_101770244	Not Available	625	Open in IMG/M
3300005618\|Ga0068864_100239159	Not Available	1682	Open in IMG/M
3300005713\|Ga0066905_100106084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1921	Open in IMG/M
3300005713\|Ga0066905_100720073	Not Available	858	Open in IMG/M
3300005764\|Ga0066903_100923383	All Organisms → cellular organisms → Bacteria	1583	Open in IMG/M
3300005764\|Ga0066903_104376364	Not Available	754	Open in IMG/M
3300005764\|Ga0066903_106122836	Not Available	629	Open in IMG/M
3300006358\|Ga0068871_102017838	Not Available	549	Open in IMG/M
3300006844\|Ga0075428_102537341	Not Available	524	Open in IMG/M
3300006903\|Ga0075426_10100248	All Organisms → cellular organisms → Bacteria → Proteobacteria	2078	Open in IMG/M
3300006904\|Ga0075424_101002477	Not Available	890	Open in IMG/M
3300006914\|Ga0075436_100192655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1442	Open in IMG/M
3300009094\|Ga0111539_11242678	Not Available	865	Open in IMG/M
3300009098\|Ga0105245_10928082	Not Available	913	Open in IMG/M
3300009156\|Ga0111538_11255843	All Organisms → cellular organisms → Bacteria → Proteobacteria	936	Open in IMG/M
3300009156\|Ga0111538_11744180	Not Available	784	Open in IMG/M
3300009162\|Ga0075423_11050778	Not Available	866	Open in IMG/M
3300009792\|Ga0126374_10848694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. C-145	703	Open in IMG/M
3300010043\|Ga0126380_10738876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes piscinae	797	Open in IMG/M
3300010043\|Ga0126380_10877787	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	743	Open in IMG/M
3300010046\|Ga0126384_10172713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1685	Open in IMG/M
3300010046\|Ga0126384_11757195	Not Available	588	Open in IMG/M
3300010047\|Ga0126382_10156743	Not Available	1567	Open in IMG/M
3300010047\|Ga0126382_10533216	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300010358\|Ga0126370_10114999	All Organisms → cellular organisms → Bacteria → Proteobacteria	1894	Open in IMG/M
3300010358\|Ga0126370_10363080	Not Available	1175	Open in IMG/M
3300010358\|Ga0126370_10819985	Not Available	832	Open in IMG/M
3300010359\|Ga0126376_10790407	Not Available	925	Open in IMG/M
3300010360\|Ga0126372_10860476	Not Available	905	Open in IMG/M
3300010361\|Ga0126378_10910987	Not Available	985	Open in IMG/M
3300010362\|Ga0126377_10018796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5639	Open in IMG/M
3300010362\|Ga0126377_11968807	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300010366\|Ga0126379_11192901	Not Available	867	Open in IMG/M
3300010371\|Ga0134125_10906510	Not Available	968	Open in IMG/M
3300010396\|Ga0134126_11701149	Not Available	693	Open in IMG/M
3300010397\|Ga0134124_10224278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium guangxiense	1717	Open in IMG/M
3300010400\|Ga0134122_12461108	Not Available	569	Open in IMG/M
3300010403\|Ga0134123_10565120	Not Available	1085	Open in IMG/M
3300012476\|Ga0157344_1005878	Not Available	776	Open in IMG/M
3300012486\|Ga0157331_1011030	Not Available	671	Open in IMG/M
3300012493\|Ga0157355_1006412	Not Available	809	Open in IMG/M
3300012495\|Ga0157323_1008959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	757	Open in IMG/M
3300012501\|Ga0157351_1017639	Not Available	726	Open in IMG/M
3300012503\|Ga0157313_1043671	Not Available	559	Open in IMG/M
3300012510\|Ga0157316_1001656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1417	Open in IMG/M
3300012513\|Ga0157326_1034010	Not Available	688	Open in IMG/M
3300012514\|Ga0157330_1008743	Not Available	949	Open in IMG/M
3300012948\|Ga0126375_10362928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes piscinae	1032	Open in IMG/M
3300012951\|Ga0164300_10232484	Not Available	924	Open in IMG/M
3300012955\|Ga0164298_11054192	Not Available	605	Open in IMG/M
3300012957\|Ga0164303_11461032	Not Available	514	Open in IMG/M
3300012958\|Ga0164299_10937009	Not Available	632	Open in IMG/M
3300012960\|Ga0164301_10709991	Not Available	758	Open in IMG/M
3300012961\|Ga0164302_10671065	Not Available	763	Open in IMG/M
3300012984\|Ga0164309_10136309	All Organisms → cellular organisms → Bacteria → Proteobacteria	1611	Open in IMG/M
3300012985\|Ga0164308_11979218	Not Available	543	Open in IMG/M
3300012986\|Ga0164304_10066973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2023	Open in IMG/M
3300012986\|Ga0164304_11322367	Not Available	588	Open in IMG/M
3300012987\|Ga0164307_10309836	Not Available	1129	Open in IMG/M
3300012989\|Ga0164305_10893953	Not Available	746	Open in IMG/M
3300013296\|Ga0157374_10600817	Not Available	1110	Open in IMG/M
3300013297\|Ga0157378_11702048	Not Available	678	Open in IMG/M
3300013306\|Ga0163162_11019798	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300014968\|Ga0157379_10354277	All Organisms → cellular organisms → Bacteria → Proteobacteria	1344	Open in IMG/M
3300014969\|Ga0157376_10369371	All Organisms → cellular organisms → Bacteria → Proteobacteria	1378	Open in IMG/M
3300015372\|Ga0132256_102512175	Not Available	617	Open in IMG/M
3300015372\|Ga0132256_102702754	All Organisms → cellular organisms → Bacteria → Proteobacteria	596	Open in IMG/M
3300015373\|Ga0132257_102238787	Not Available	708	Open in IMG/M
3300015374\|Ga0132255_100961476	Not Available	1280	Open in IMG/M
3300015374\|Ga0132255_105541234	Not Available	534	Open in IMG/M
3300016294\|Ga0182041_10000458	All Organisms → cellular organisms → Bacteria → Proteobacteria	19121	Open in IMG/M
3300016341\|Ga0182035_11361260	Not Available	636	Open in IMG/M
3300016371\|Ga0182034_11056014	Not Available	703	Open in IMG/M
3300017792\|Ga0163161_10722024	Not Available	831	Open in IMG/M
3300021560\|Ga0126371_10524461	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix → Labilithrix luteola	1333	Open in IMG/M
3300025900\|Ga0207710_10203850	Not Available	978	Open in IMG/M
3300025906\|Ga0207699_10291423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	1137	Open in IMG/M
3300025915\|Ga0207693_10059393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2995	Open in IMG/M
3300025919\|Ga0207657_11399653	Not Available	525	Open in IMG/M
3300025929\|Ga0207664_11230776	Not Available	667	Open in IMG/M
3300025931\|Ga0207644_10922298	Not Available	732	Open in IMG/M
3300025932\|Ga0207690_11492490	Not Available	565	Open in IMG/M
3300025941\|Ga0207711_11820799	Not Available	552	Open in IMG/M
3300026023\|Ga0207677_10775734	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	856	Open in IMG/M
3300026121\|Ga0207683_11038640	Not Available	760	Open in IMG/M
3300031170\|Ga0307498_10001731	All Organisms → cellular organisms → Bacteria → Proteobacteria	3319	Open in IMG/M
3300031226\|Ga0307497_10230837	Not Available	817	Open in IMG/M
3300031538\|Ga0310888_10251105	All Organisms → cellular organisms → Bacteria → Proteobacteria	993	Open in IMG/M
3300031545\|Ga0318541_10305174	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix → Labilithrix luteola	887	Open in IMG/M
3300031713\|Ga0318496_10662828	Not Available	576	Open in IMG/M
3300031720\|Ga0307469_11982476	Not Available	565	Open in IMG/M
3300031820\|Ga0307473_11377700	Not Available	531	Open in IMG/M
3300031831\|Ga0318564_10293041	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix → Labilithrix luteola	719	Open in IMG/M
3300031847\|Ga0310907_10072371	Not Available	1411	Open in IMG/M
3300031854\|Ga0310904_10626949	Not Available	737	Open in IMG/M
3300031858\|Ga0310892_10113959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1505	Open in IMG/M
3300031880\|Ga0318544_10421283	Not Available	519	Open in IMG/M
3300031896\|Ga0318551_10680708	Not Available	595	Open in IMG/M
3300031908\|Ga0310900_10996972	Not Available	688	Open in IMG/M
3300031910\|Ga0306923_11340008	Not Available	757	Open in IMG/M
3300031940\|Ga0310901_10046451	Not Available	1404	Open in IMG/M
3300031944\|Ga0310884_10817082	Not Available	571	Open in IMG/M
3300031954\|Ga0306926_12634934	Not Available	548	Open in IMG/M
3300032000\|Ga0310903_10681700	Not Available	554	Open in IMG/M
3300032001\|Ga0306922_10413507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1444	Open in IMG/M
3300032003\|Ga0310897_10533576	Not Available	573	Open in IMG/M
3300032012\|Ga0310902_10512268	Not Available	784	Open in IMG/M
3300032017\|Ga0310899_10722052	Not Available	507	Open in IMG/M
3300032052\|Ga0318506_10432812	Not Available	583	Open in IMG/M
3300032075\|Ga0310890_10183293	Not Available	1420	Open in IMG/M
3300032122\|Ga0310895_10240029	Not Available	832	Open in IMG/M
3300032211\|Ga0310896_10023922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2210	Open in IMG/M
3300032261\|Ga0306920_101915462	Not Available	833	Open in IMG/M
3300034817\|Ga0373948_0015127	Not Available	1414	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	67.67%
Host-Associated	Host-Associated	32.33%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.67%
Plants	Host-Associated → Plants	32.33%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.77%
Roots	Host-Associated → Plants → Roots	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.28%
Loam	Environmental → Terrestrial → Soil → Loam	10.53%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.53%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.26%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.75%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.58%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.28%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	10.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.26%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.75%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.75%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	10.53%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.02%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.26%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	5.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.51%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	3.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.01%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.26%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.26%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.26%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	1.50%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.50%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.50%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.75%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000816	Forest soil microbial communities from Amazon forest - 2010 replicate II A10	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012476	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.yng.070610	Host-Associated	Open in IMG/M
3300012486	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.120510	Environmental	Open in IMG/M
3300012493	Unplanted soil (control) microbial communities from North Carolina - M.Soil.10.yng.090610	Environmental	Open in IMG/M
3300012495	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.old.040610	Host-Associated	Open in IMG/M
3300012501	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610	Environmental	Open in IMG/M
3300012503	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.5.old.080610_R	Host-Associated	Open in IMG/M
3300012510	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.9.old.080610	Host-Associated	Open in IMG/M
3300012513	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510	Host-Associated	Open in IMG/M
3300012514	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10000914	3300000580	Forest Soil	MSSNPVDEWSLVREQFEALVRERSDNIDDLLDAQFCKRFSQLITHATDRARLRAHSENKGAPAGTRAKDPLDDSDPAFRGTVYALVIITVFCSAALAVGMVVGIN*
AF_2010_repII_A01DRAFT_10465642	3300000580	Forest Soil	MSSNPVDEWSLVRERFEALVRERSDNIDDLLDAQFCKRFSQLITHATERARLRAHRENEGAPAGTRAKDPLDDSDPTVRGTIYALVIITVFCSAALAFGMVVGIN*
AF_2010_repII_A001DRAFT_101197702	3300000793	Forest Soil	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHSGNGRAQAGTRAKIVDEPLDDSDPTFRGTVYALVVITVFCSAALAVGAVFGNN*
AF_2010_repII_A10DRAFT_10002957	3300000816	Forest Soil	MPSNPVDEWSLVRDQFEALVRERSDNIDDLLDAQFCNRFSQLITHATDRARLRAHSENGGAPAGAKAKDLLDDSDPTFRGTVYALVIITVFCSAALAVGMVVGIN*
Ga0062594_1000946151	3300005093	Soil	MSSAPVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFSQLITHAAARGQLRGRSENGGAPAGTRAKIVDDPLDDSDPTFRGTVYALVIITVFCSAALAVGVVVGIN*
Ga0065707_107307521	3300005295	Switchgrass Rhizosphere	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHSGIGRAPAGTRAKIVDEPLDDSDPTFRGTVYALVIITGFCSAALGVGA
Ga0066388_1004148823	3300005332	Tropical Forest Soil	MSSNPVDEWSLVRERFEALVRERSDNIDDLLDAQFCKRFSQLITHATERARLRAHSENEGAPAGTRAKDPLDDSDPTVRGTIYALVIITVFCSAALAFGMVVGIN*
Ga0066388_1011499233	3300005332	Tropical Forest Soil	MSSNPVDEWSLVREQFEVLVRERSDNIDDLLDAQFCNRFSQLITHATHRARLRTVGENGGAPAAAKAKDPLDDSDPTFRGTVYALVIVTVFCSAALAVGMVVGMN*
Ga0070682_1018360972	3300005337	Corn Rhizosphere	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHIGNGRAQAGTRAKIVDEPLDDSDPTFRWTVYALVVITGFCSAALG
Ga0070660_1012342571	3300005339	Corn Rhizosphere	MSSAPVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFSQLITHAAARGQLRGRSENGGAPAGTRAKIVDDPLDDSDPTFRGTVYALVIITVFCSAALAVGVMV
Ga0070675_1018025861	3300005354	Miscanthus Rhizosphere	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCKRFSQLITHAAARGQLRARSENGGALAGTRTKIVDDPLADSDPTFRGTVYALVIITVFCSAALAVGV
Ga0070671_1009707452	3300005355	Switchgrass Rhizosphere	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRVHSGNGRAQAGTRAKIVDEPLDDSDPNFRGTVYALVVITGFCSAALGFGAVFGNN*
Ga0070659_1015148022	3300005366	Corn Rhizosphere	MSSAPVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFSQLITHAAARGQLRGRSENGGAPAGTRAKIVDDPLDDSDPTFRGTVYALVIITVFCSAALAVGVVVGIN*QSQRTAGKYPD
Ga0070709_103156641	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSSAPVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFSQLITHEAARGQLRGRSENGGAPAGTRAKIVDDPLDDSDPTFRGTVYALVIITVFCSAALAVGVVVGIN*
Ga0070710_104604902	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHSGNGRAQAGTRAKIVDEPLDDSDPNFRGTVYALVVITGFWSAALGVGAVFGNN*
Ga0070663_1003783892	3300005455	Corn Rhizosphere	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHSGNGRAQAGTRAKIVDDDSDRTFRGTVYALVVITGFCSAALGVGAVFGNN*
Ga0070662_1009477843	3300005457	Corn Rhizosphere	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHSGNGRAQAGTRAKIVDEPLDDSDPTFRATVYALVIITGFCSAALGVGAVFGNN*
Ga0070662_1017498191	3300005457	Corn Rhizosphere	VRERSDNIDDLLDAQFCNRFSQLITHAAARGQLRGRSENGGAPAGTRAKIVDDPLDDSDPTFRGTVYALVIITVFCSAALAVGVVVGIN*
Ga0070693_1015382201	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MSSAPVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFSQLITHAAARGQLRGRSENGGAPAGTRAKIVDDPLDDSDPTFRGTVYALVIITVFCSAALAVGVMVGIN*
Ga0070665_1017702441	3300005548	Switchgrass Rhizosphere	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHSGNGRAQAGTRAKIVDDPVDDGELRGTVYALVIITGFCSAALAVGRVVGIN*
Ga0068864_1002391594	3300005618	Switchgrass Rhizosphere	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHSGNGRAQAGTRAKIVDEPLDDSDPNFRGTVYALVVITGFCSAALGFGAVFGNN*
Ga0066905_1001060843	3300005713	Tropical Forest Soil	MSSNPVDEWSLVREQFEALVRERSDNIDDLLDAQFCKRFSQLITHATDRARLRAHSKNKGAPAGTRAKDPLDDSDPAFRGTVYALVIITVFCSAALAVGMVVGIN*
Ga0066905_1007200731	3300005713	Tropical Forest Soil	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHSGNGRAQAGTRAKIVDEPLDDSDPTFRGTVYALVVITGFCSAALGVGAVFGNN*
Ga0066903_1009233832	3300005764	Tropical Forest Soil	MPSNPVDEWSLVRDQFEALVRERSDNIDDLLDAQFCNRFSQLITHATERARLRAHSENGGAPAGAKAKDLLDDSDPTFRGTVYALVIITVFCSAALAVGMVVGIN*
Ga0066903_1043763641	3300005764	Tropical Forest Soil	NTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLVTHATDRARLRAHSGNGRAQAGTRAKIENGRAPAGTRAKIVDEPLDDSDPTFRGTVYALVVIIGFCSAALGVGAVFGNN*
Ga0066903_1061228362	3300005764	Tropical Forest Soil	LVRKQFEALVRERSDNIDDLLDAQFCKRFSQLITHATDRARLRAHSENEGAPAGTRAKDPLDDSDPTFRGTIYALVIITVFCSAALAFGMVVGIN*
Ga0068871_1020178382	3300006358	Miscanthus Rhizosphere	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFSQLITHAAARGQLRGRSENGGAPAGTRAKIVDDPLDDSDPTFRGTVYALVIITVFCSAALAVGVMVGIN*
Ga0075428_1025373412	3300006844	Populus Rhizosphere	MSSAPVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFSQLITHAAARGQLRGRSENGGAPAGTRAKIVDDPLDDSDPTFRGTVYALVIITGFCSAALAVGVMLGIN*
Ga0075426_101002484	3300006903	Populus Rhizosphere	MSSAPVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFSQLITHAAARGQLRARSENGGALAGTRTKIVDDPLADSDPTFRGTVYALVIITVFCSAALAVGVVVGIN*
Ga0075424_1010024771	3300006904	Populus Rhizosphere	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDARFCNRFGQLITHATYRARLRAHIGNGRAQAGTRAKIVDEPLDDSDPNFRGTVYALVVITGFCSAALGFGAVFGNN*
Ga0075436_1001926551	3300006914	Populus Rhizosphere	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRVHSGNGRAQAGTRAKIVDEPLDDSDPNFRGTVYALVVIT
Ga0111539_112426781	3300009094	Populus Rhizosphere	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHIGNGRAQAGTRAKIVDESLDVSDPTFRGTVYALVVITGFCSAALGFGAVFGNN*
Ga0105245_109280822	3300009098	Miscanthus Rhizosphere	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHSGNGRAQAGTRAKIVDDDSDRTFRGTVYALVVITGFCSAALGFGAVFGNN*
Ga0111538_112558433	3300009156	Populus Rhizosphere	DDWTLVREKFEALVRERSDNIDDLLDAQFCKRFSQLITHAAARGQLRARSENGGALAGTRTKIVDDPLADSDPTFRGTVYALVIITVFCSAALAVGVMVGIN*
Ga0111538_117441801	3300009156	Populus Rhizosphere	MSSAPVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFSQLITHEAARGQLRGRSENGGAPAGTRAKIVDDPLDDSDPTFRGTVYALVIITVFCSAALAVGV
Ga0075423_110507782	3300009162	Populus Rhizosphere	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDARFCNRFGQLITHATDRARLRAHIGNGRAQAGTRAKIVDEPLDDSDPNFRGTVYALVVITGFCSAALGVGAVFENN*
Ga0126374_108486942	3300009792	Tropical Forest Soil	AMSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHSGNGRTQAGTRAKIENGRAPAGTRAKIVDEPLDDSDPTFRGTVYALVVITGFCSAALGVGAVFGNN*
Ga0126380_107388762	3300010043	Tropical Forest Soil	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHSGNGRAQAGTRAKIENGRAPAGTRAKIVDEPLDDSDPTFRGTIYALVVITGFCSAALGVGAVFGNN*
Ga0126380_108777871	3300010043	Tropical Forest Soil	MSSNPDDEWSLVREQFEVLVRERSDNIDDLLDAQFCNRFSQLITHATHRARLRTVGENGGAPAAAKAKDPLDDSDPTFRGTVYALVIVTVFCSAALAVGMVVGMN*
Ga0126384_101727132	3300010046	Tropical Forest Soil	MSSNPVDEWSLVREQFEALVRERSDNIDDLLDAQFCKRFSQLITHATDRARLRAHSENKGAPAGTRAKDPLEDSDPAFRGTVYALVIITVFCSAALAVGMVVGIN*
Ga0126384_117571951	3300010046	Tropical Forest Soil	LRVAAVTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHSENGKAPAGTRAKIVDDPMDDSDPTFRGTVHALVIIAGFCSAALAVGRVVGIN*
Ga0126382_101567431	3300010047	Tropical Forest Soil	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHSGNGRAQAGTRAKIVDEPLDDSDPTFRGTVYALVVITGFCSAALGVSVVFGNN*
Ga0126382_105332163	3300010047	Tropical Forest Soil	DWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARAHSGNGRAQAGTRAKIENGRAPAGTRAKIVDEPLDDSDPTFRGTVYALVVITGFCSVALGVGAVFGNN*
Ga0126370_101149991	3300010358	Tropical Forest Soil	MSSNPVDEWSLVREQFEALVRERSDNIDDLLDAQFCKRFSQLITHATDRARLRAHSENKGAPAGTRAKDPLEDSDPAFRGTVYALVIITVFCSAALA
Ga0126370_103630801	3300010358	Tropical Forest Soil	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHSGNGRAQAGTRAKIVDEPLDDSDATFRGTVYALVVITGFCSAALG
Ga0126370_108199853	3300010358	Tropical Forest Soil	MPNNPLDEWSLVRKQFEALVRERSDNIDDLLDAQFCKRFSQLITHATDRARLRAHSENEGAPAGTRAKDPLDDSDPTFRGTIYALVIIT
Ga0126376_107904072	3300010359	Tropical Forest Soil	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHSGNGRAQAGTSAKIENGRAPAGTRAKIVDEPLDDSDPTFRGTIYALVVITGFCSAALGVGAVFGNN*
Ga0126372_108604761	3300010360	Tropical Forest Soil	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHSGNGRTQAGTRAKIENGRAPAGTRAKIVDEPLDDSDPTFRGTVYALVVIIGFCSVALGVGAVFGNN*
Ga0126378_109109872	3300010361	Tropical Forest Soil	MSSNPVDEWSLVRERFEALVRERSDNIDDLLDAQFCKRFSQLITHATERARLRAHSENEGAPAGTRAKDPLDDSDPTFRGTIYALVIITVFCSAALAFGMVVGIN*
Ga0126377_100187962	3300010362	Tropical Forest Soil	MSSNPVDEWSLVREQFEALVRERSDNIDDLLDAQFCKRFSQLITHATDRARLRAHSENKGAPAGTRAKDPLDDSDPAFRGTVYALVIITGFCSAALAVGMVVGIN*
Ga0126377_119688072	3300010362	Tropical Forest Soil	REQFEALVRERSDNIDDLLDAQFCNRFSQLITHATHRARLRALGENGGAPAAAKAKDPLDDSDPTFRGTVYALVIVTVFCSAALAVGMVVGMN*
Ga0126379_111929012	3300010366	Tropical Forest Soil	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLLAHSGNGRAQAGTRAKIENGRAPAGTRAKIVDEPLDDSDPTFRGTVYALVVITGFYSAALGVGAAFGNN*
Ga0134125_109065102	3300010371	Terrestrial Soil	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHSGNGRAQAGTRAKIVDDPLDDSDPTFRGTVYALVIITVFCSAALAVGVMFGIN*
Ga0134126_117011492	3300010396	Terrestrial Soil	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFSQLITHAAARGQLRGRSENGGAPAGTRAKIVDDPLDDSDPTFRGTVYALVIITVFCSAALAVGVMVG
Ga0134124_102242781	3300010397	Terrestrial Soil	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHSGNGRVQAGTRAKIVDEPLDDSDPTFRWTVYALVVITGFCSAALGVGAVLGNN*
Ga0134122_124611081	3300010400	Terrestrial Soil	MSSAPDDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFSQLITHAAARGQLRGRSENGGAPAGTRAKIVDDPLDDSDPTFRGTVYALVIITVFCSAALAVGVMVGIN*
Ga0134123_105651202	3300010403	Terrestrial Soil	MSSAPVDDWTLVREKFEALVRERSDNIDDLLDAQFCKRFSQLITHAAARGQLRGRSENGGAPAGTRAKIVDDPLDDSDPTFRGTVYALVIITVFCSAALAVGVVVGIN*
Ga0157344_10058781	3300012476	Arabidopsis Rhizosphere	VRERSDNIDDLLDDRFCKRFGQLVTHATDRARLRAHSENGRAQAGTRAKIVDEPLDDSDPNFRGTVYALVVITGFCSAALGFGAVF
Ga0157331_10110301	3300012486	Soil	VPNTQVDDWTLVRQKFEALVRERSDNIDDLLDARFCNRFGQLITHATDRARLRAHSGNGRVQAGTRAKIVDEPLDDSDPNFRKRTWRLHCANDQKRSSFCTAQ
Ga0157355_10064122	3300012493	Unplanted Soil	MSNTQVDDWTLVREKFEALVRERSDNINDLLDARFCNRFGQLITHATDRARLRAHSGNGRAPAGTRAKIVDEPLDDSDPNFRGTVYALVVITGFCSAALGFGAVFGNN*
Ga0157323_10089592	3300012495	Arabidopsis Rhizosphere	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHIGNGRAQAGTRAKIVDEPLDDSDRTFRGTVYALVVITGFCSAALGVGAVFGNN*
Ga0157351_10176391	3300012501	Unplanted Soil	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHIGNGRAQAGTRAKIVDEPLDDSDPNFRGTVYALVVITGFCSAALGFGAVFGNN*
Ga0157313_10436712	3300012503	Arabidopsis Rhizosphere	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDARFCNRFGQLITHATDRARLRAHIGNGRAQAGTRAKIVDESLDVSDPTFRGTVYALVVITGFCSAALGFGAVFGN
Ga0157316_10016561	3300012510	Arabidopsis Rhizosphere	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHSGNGRAQAGTRAKIVDEPLDDSDPNFRGTVYALVVITGFCSAALGFG
Ga0157326_10340101	3300012513	Arabidopsis Rhizosphere	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDARFCNRFGQLITHATDRARLRAHSGNGRAQAGTRAKIVDESLDVSDPTFRGTVYA
Ga0157330_10087431	3300012514	Soil	MSNTQVDDWTLVREKFEALVRERSENIDDLLDAQFWNRFGQLITHATDRARLRAHIGNGRAQAGTRAKIVDESLDVSDPTFRGTVYALVVITGFCSAAL
Ga0126375_103629282	3300012948	Tropical Forest Soil	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHSGIGRAPAGTRAKIVDEPLDDSDPTFRGTVYALVVITGFCSAALGVGAVFGNN*
Ga0164300_102324841	3300012951	Soil	MSSAPVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFSQLITHATDRARLRAHSENGGAPAGAKAKAKDLLDDSGPTFRGTVYALVIITVFCSAALAVGVVVGIN*
Ga0164298_110541922	3300012955	Soil	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHSGNGRAQAGTATKIEIGRAQAGTRAKIVDDPVDDSELRGTVYALVIITGFCSAALAGGRVVGIN*
Ga0164303_114610322	3300012957	Soil	MSSAPVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFSQLITHEAARGQLRGRSENGGAPAGTRAKIVDDPLDDSDPTFRGTVYALVTITVFCSAALAVGVMVGIN*
Ga0164299_109370092	3300012958	Soil	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHSGNGRAQAGTRAKIVDEPLDDSDTNFRGTVYALVVITGFCSAALGVGAVFGNN*
Ga0164301_107099911	3300012960	Soil	MSRTPVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFSQLITHEAARGQLRGRSENGGAPAGTRAKIVDDPLDDSDPTFRGTVYALVIITVFCSAALAVGVVVGIN*
Ga0164302_106710653	3300012961	Soil	MSSNPVDEWSLVRDQFEVLMRERSDNIDDLLDAQFCNRFSQLITHATDRARLRAHSENGGAPAKDPLDDSDPTFRVTVYALGVVIVFCSSALAVGVVVGIN*
Ga0164309_101363093	3300012984	Soil	MSSTPVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFSQLITHAAARGQLRGRSENGGAPAGTRAKIVDDPLDDSDPTFRGTVYALVIITVFCSAALAVGVVVGIN*
Ga0164308_119792182	3300012985	Soil	SNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHSGNGRAQAGTATKIEIGRAQAGTRAKIVDDPVDDSELRGTVYALVIITGFCSPALAVGRVVGIN*
Ga0164304_100669732	3300012986	Soil	MSSAPDDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFSQLITHAAARGQLRGRSENGGAPAGTRAKIVDDPLDDSDPTFRGTVYALVIITVFCSAALAVGVVVGIN*
Ga0164304_113223672	3300012986	Soil	DRAMSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHSENGRAQAGTATKIEIGRAQAGTRAKIVDEPLDDSDPTFRGTVYALVVITGFCSAALGVGAVFGNN*
Ga0164307_103098361	3300012987	Soil	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDDRFCKRFGQLVTHATDRARLRAHSENGRAQAGTATKIEIGRAQAGTRAKIVDDPVDDSELRGTVYALVIITGFCSAALGVGAVFGNN*
Ga0164305_108939531	3300012989	Soil	MSSAPVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFSQLITHAAARGQLRGRSENGGAPAGTRAKIVDDPLDDSDPTFRGTVYALVTITGFCSAALAVGVMLGIN*
Ga0157374_106008172	3300013296	Miscanthus Rhizosphere	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHIGNGRAQAGTRAKIVDEPLDDSDPNFRGTVYALVVITGFCSAALGVGAVFGNN*
Ga0157378_117020483	3300013297	Miscanthus Rhizosphere	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHSGNGRAQAGTRAKIVDEPLDDSDPNFRGTVYALVVITGFCSAALGVGAVFGNN*
Ga0163162_110197982	3300013306	Switchgrass Rhizosphere	DDWTLVREKFEALVRERSDNIDDLLDAQFCNRFSQLITHAAARGQLRGRSENGGAPAGTRAKIVDDPLDDSDPTFRGTVYALVIITVFCSAALAVGVVVGIN*
Ga0157379_103542773	3300014968	Switchgrass Rhizosphere	MSNTQVDDWTLVREKFEALVRERSDNIDDRLDAQFCNRFGQLITHATDRARLRAHSGNGRAQAGTRAKIVDEPLDDSDPNFRGTVYALVVITGFCSAALGFGAVFGNN*
Ga0157376_103693712	3300014969	Miscanthus Rhizosphere	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHSGNGRAQAGTRAKIVDEPLDDSDPNFRGTVYALVIITGFCSAALGVGAVFGNN*
Ga0132256_1025121752	3300015372	Arabidopsis Rhizosphere	VRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHSENGGAPAGAKAKAKDLLDDSGPTFRGTVYALVIITVFCSAALAVGMVVGIN*
Ga0132256_1027027541	3300015372	Arabidopsis Rhizosphere	GQLVTHATDRARLRAHSENGRAQAGTATKIEIGRAQAGTRAKIVDDPVDDSELRGTVYALVIITGFCSAALAVGRVVGIN*
Ga0132257_1022387872	3300015373	Arabidopsis Rhizosphere	VPNTQVDDWTLVRQKFEALVRERSDNIDDLLDDRFCKRFGQLVTHATDRARLRAHSENGRAQAGTATKIEIGRAQAGTRAKIVDDPVDDSELRGTVYALVIITGFCSAALAVGRVVGIN*
Ga0132255_1009614761	3300015374	Arabidopsis Rhizosphere	MSNTQVDDWTLVRQKFEALVRERSDNIDDLLDDRFCKRFGQLVTHATDRARLRAHSENGRAQAGTATKIEIGRAQAGTRAKIVDDPVDDSELRGTVYALVIITGFCSAALAVGRVVGIN*
Ga0132255_1055412341	3300015374	Arabidopsis Rhizosphere	VRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHSGNGRAQAGTRAKIVDDDSDRTFRGTVYALVVITGFCSAALGVGAVFGNN*
Ga0182041_1000045815	3300016294	Soil	MSSNPVDEWSLVRKQFEALVRERSDNIDDLLDAQFCKRFSQLITHATDRARLRVHSENEGAPAGTRAKDPLDDSDPTFRGTIYALVIITVFCSAALAFGMVVGIN
Ga0182035_113612601	3300016341	Soil	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRTRLRAHSGNGRAQAGTRAKIENGRAPAGTRAKILDEPLDDSDPTFRGTVYALVVITGFCSAALGLGAVFGN
Ga0182034_110560142	3300016371	Soil	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHSGNGRAQAGTRAKIENGRAPAGTRAKILDEPLDDSDPTFRGTVYALVVITGFCSAALGVGAVFGN
Ga0163161_107220242	3300017792	Switchgrass Rhizosphere	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHSGNGRAQAGTRAKIVDDDSDRTFRGTVYALVVITGFCSAALGVGAVFGNN
Ga0126371_105244612	3300021560	Tropical Forest Soil	ESASGGESAMPSNPVDEWSLVRKQFEALVRERSDNIDDLLDAQFCKRFSQLITHATDRARLRAHSENEGAPAGTRAKDPLDDSDPTVRGTIYALVIITVFCSAALAFGMVVGIN
Ga0207710_102038503	3300025900	Switchgrass Rhizosphere	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHSGNGRAQAGTRAKIVDEPLDDSDPNFRGTVYALVVITGFCSA
Ga0207699_102914232	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSSAPVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFSQLITHEAARGQLRGRSENGGAPAGTRAKIVDDPLDDSDPTFRGTVYALVIITVFCSAALAVGVMVGIN
Ga0207693_100593933	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSSAPDDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFSQLITHAAARGQLRGRSENGGAPAGTRAKIVDDPLDDSDPTFRGTVYALVIITVFCSAALAVGVMVGIN
Ga0207657_113996532	3300025919	Corn Rhizosphere	MSSAPVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFSQLITHAAARGQLRGRSENGGAPAGTRAKIVDDPLDDSDPTFRGTVYALVIITV
Ga0207664_112307761	3300025929	Agricultural Soil	MSSAPVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFSQLITHEAARGQLRGRSENGGAPAGTRAKIVDDPLDDSDPTFRGTVYALVIITVFCSAALAVGVVVGIN
Ga0207644_109222982	3300025931	Switchgrass Rhizosphere	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFSQLITHAAARGQLRGRSENGGAPAGTRAKIVDDPLDDSDPTFRGTVYALVFITVFCSAALAVGVVVGIN
Ga0207690_114924902	3300025932	Corn Rhizosphere	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFSQLITHAAARGQLRGRSENGGAPAGTRAKIVDDPLDDSDPTFRGTVYALVIITVFCSAALAVGVVVGIN
Ga0207711_118207991	3300025941	Switchgrass Rhizosphere	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHSGNGRAQAGTRAKIVDEPLDDSDPNFRGTVYALVVITGFCSAALGFGAVFGNN
Ga0207677_107757342	3300026023	Miscanthus Rhizosphere	MSSAPVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFSQLITHAAARGQLRGRSENGGAPAGTRAKIVDDPLDDSDPTFRGTVYALVIITVFCSAALAVGVVVGLN
Ga0207683_110386402	3300026121	Miscanthus Rhizosphere	MSSAPVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHSGNGRAQAGTRAKIVDEPLDDSDPNFRGTVYALVVITGFCSAALGFGAVFGNN
Ga0307498_100017312	3300031170	Soil	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDVQFCNRFGQLITHATDRARLRAHIGNGRAQAGTRAKIVDESLDVSDPTFRGTVYALVVITGFCSAALGFGAVFGNN
Ga0307497_102308371	3300031226	Soil	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDARFCNRFGQLITHATDRARLRAHIGNGRAQAGTRAKIVDESLDVSDPTFRGTVYALVVITGFCSAALGFGAVFGNN
Ga0310888_102511052	3300031538	Soil	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRVHSGNGRAQAGTRAKIVDEPLDDSDPNFRGTVYALVVITGFCSAALGFGAVFGNN
Ga0318541_103051742	3300031545	Soil	MSSNPVDEWSLVRKQFEALVRERSDNIDDLLDAEFCKRFSQLITHATDRARLRVHSENEGAPAGTRAKDPLDDSDPTFRGTIYALVIITVFCSAALAFGMVVGIN
Ga0318496_106628281	3300031713	Soil	MSSNPVDEWSLVRKQFEALVRERSDNIDDLLDAEFCKRFSQLITHATDRAKDPLDDSDPTFRGTIYALVIITVFCSAALAFGMVVGIN
Ga0307469_119824762	3300031720	Hardwood Forest Soil	MSSAPVDDWTLVREKFEALVRERSDNIDDLLDAQFCKRFSQLITHAAARGQLRGRSENGGAPAGTRAKIVDDPLDDSDPTFRGTVYALVII
Ga0307473_113777001	3300031820	Hardwood Forest Soil	MSSAPVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHSGIGRAPAGTRAKIVDDPLDDSDPTFRGTVYALVIITVFCSAALAVGVVVGIN
Ga0318564_102930412	3300031831	Soil	AMSSNPVDEWSLVRKQFEALVRERSDNIDDLLDAEFCKRFSQLITHATDRARLRVHSENEGAPAGTRAKDPLDDSDPTFRGTIYALVIITVFCSAALAFGMVVGIN
Ga0310907_100723713	3300031847	Soil	MFNTQVDDWTLVRQKFEALVRERSDNIDDLLDDRFCKRFGQLVTHATDRARLRAHSENGRAQAGTATKIEIGRAQAGTRAKIVDDPVDDSELRGTVYALVIITGFCSAALAVGRVVGIN
Ga0310904_106269492	3300031854	Soil	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHIGNGRAQAGTRAKIVDEPLDDSDRTFRGTVYALVVITGFCSAALGFGAVFGNN
Ga0310892_101139594	3300031858	Soil	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHIGNGRAQAGTRAKIVDEPLDDSDPTFRGTVYALVVITGFCSAALGVGA
Ga0318544_104212831	3300031880	Soil	SSNPVDEWSLVRKQFEALVRERSDNIDDLLDAEFCKRFSQLITHATDRARLRVHSENEGAPAGTRAKDPLDDSDPTFRGTIYALVIITVFCSAALAFGMVVGIN
Ga0318551_106807082	3300031896	Soil	MSSNPVDEWSLVRKQFEALVRERSDNIDDLLDAEFCKRFSQLITHATDRARLRVHSENEGAPAGTRAKDPLDDSDPTFRGTIYALVIITVFCSAALAFGM
Ga0310900_109969723	3300031908	Soil	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHIGNGRAQAGTRAKIVDESLDVSDPTFRGTVYALVVITGFCSAALGFGAVFGNN
Ga0306923_113400081	3300031910	Soil	VSNTQVDDRALVREKFEALVRERSDNIDDLLDAQFCDRFGQLITHATDRARLRAHSGNGRAQAGTRAKIENGRAPAGTRAKIVDEPLDDSDPTFRGTVYALVVITGFCSAALGVGAVFGN
Ga0310901_100464512	3300031940	Soil	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHIGNGRAQAGTRAKIVDEPLDDSDPNFRGTVYALVVITGFCSAALGFGAVFGNN
Ga0310884_108170822	3300031944	Soil	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRVHSGNGRAQAGTRAKIVDDPLDDSDPTFRGTVYALVIITVFSSTALAVGLVV
Ga0306926_126349341	3300031954	Soil	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHSGNGRAQAGTKAKIENGRAPAGTRAKIVDEPLDDSDPTFRGTVYALVVITGFCS
Ga0310903_106817001	3300032000	Soil	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDARFCNRFGQLITHATDRARLRAHSGNGRAQAGTRAKIVDESLDVSDPTFRGTVYALVVITGFCSAALGFGAVFGNN
Ga0306922_104135072	3300032001	Soil	MSNTQVDNWTLVREKFEALVRERSDNIDDLLDAQFCDRFGQLITHATDRARLRAHSGNGRAQAGTRAKIENGRAPAGTRAKIVDEPLDDSDPTFRGTVYALVVITGFCSAALGLGAVFGN
Ga0310897_105335762	3300032003	Soil	DWTLVRQKFEALVRERSDNIDDLLDDRFCKRFGQLVTHATDRARLRAHSENGRAQAGTATKIEIGRAQAGTRAKIVDDPVDDSELRGTVYALVIITGFCSAALAVGRVVGIN
Ga0310902_105122682	3300032012	Soil	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDVQFCNRFGQLITHATDRARLRAHSGNGRAQAGTRAKIVDDDSDRTFRGTVYALVVITGFCSAALGVGAVFGNN
Ga0310899_107220522	3300032017	Soil	GGDRAMSNTQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHIGNGRAQAGTRAKIVDESLDVSDPTFRGTVYALVVITGFCSAALGFGAVFGNN
Ga0318506_104328122	3300032052	Soil	MSSNPVDEWSLVRKQFEALVRERSDNIDDLLDAEFCKRFSQLITHATDRARLRVHSENEGAPAGTRAKDPLDDSDPTFRGTIYALVI
Ga0310890_101832932	3300032075	Soil	MSSAPVDDWTLVREKFEALVRERSDNIDDLLDDRFCKRFGQLVTHATDRARLRAHSENGRAQAGTATKIEIGRAQAGTRAKIVDDPVDDSELRGTVYALVIITGFCTAALAVGRVVGIN
Ga0310895_102400291	3300032122	Soil	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDARFCNRFGQLITHATDRARLRAHSGNGRAQAGTRAKIVDEPLDDSDPNFRGTVYALVVITGFC
Ga0310896_100239224	3300032211	Soil	MSNMQVDDWTLVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHIGNGRAQAGTRAKIVDESLDVSDPTFRGTVYALVVITGFCSAALGFGAVFGNN
Ga0306920_1019154622	3300032261	Soil	VSNTQVDDRALVREKFEALVRERSDNIDDLLDAQFCNRFGQLITHATDRARLRAHSGNGRAQAGTRAKIENGRAPAGTRAKIVDEPLDDSDPTFRGTVYALVVITGFCSAALGVGAVFGN
Ga0373948_0015127_341_667	3300034817	Rhizosphere Soil	MSNTQVDDWTLVREKFEALVRERSDNIDDLLDARFCNRFGQLITHATDRARLRAHIGNGRAQAGTRAKIVDEPLDDSDPNFRGTVYALVVITGFCSAALGFGAVFGNN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F059999

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences