NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F060003

Metagenome Family F060003

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F060003
Family Type Metagenome
Number of Sequences 133
Average Sequence Length 122 residues
Representative Sequence VFWPDDRHGGMPPVGFGLFRALEGGYELWLAGLEFAQRGGGHGRALLASLMSTPPGQKTYVVRVQRTSRYVATVTHLLDTLGFDSVGDTARLRWFVRRDAPVALSARIRAAVNARRTPS
Number of Associated Samples 117
Number of Associated Scaffolds 133

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.75 %
% of genes near scaffold ends (potentially truncated) 99.25 %
% of genes from short scaffolds (< 2000 bps) 87.97 %
Associated GOLD sequencing projects 102
AlphaFold2 3D model prediction Yes
3D model pTM-score0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (99.248 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(11.278 % of family members)
Environment Ontology (ENVO) Unclassified
(50.376 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(60.902 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 22.45%    β-sheet: 23.13%    Coil/Unstructured: 54.42%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.67
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 133 Family Scaffolds
PF00581Rhodanese 35.34
PF09335SNARE_assoc 22.56
PF05726Pirin_C 4.51
PF01612DNA_pol_A_exo1 1.50
PF06161DUF975 1.50
PF00476DNA_pol_A 1.50
PF11191DUF2782 0.75
PF00005ABC_tran 0.75

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 133 Family Scaffolds
COG0398Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 familyFunction unknown [S] 22.56
COG0586Membrane integrity protein DedA, putative transporter, DedA/Tvp38 familyCell wall/membrane/envelope biogenesis [M] 22.56
COG1238Uncharacterized membrane protein YqaA, VTT domainFunction unknown [S] 22.56
COG1741Redox-sensitive bicupin YhaK, pirin superfamilyGeneral function prediction only [R] 4.51
COG0749DNA polymerase I, 3'-5' exonuclease and polymerase domainsReplication, recombination and repair [L] 1.50
COG5523Uncharacterized membrane proteinFunction unknown [S] 1.50

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.25 %
UnclassifiedrootN/A0.75 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001431|F14TB_106990173All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria573Open in IMG/M
3300004155|Ga0066600_10042123All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1575Open in IMG/M
3300004155|Ga0066600_10084803All Organisms → cellular organisms → Bacteria → Proteobacteria1205Open in IMG/M
3300005171|Ga0066677_10580809All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria638Open in IMG/M
3300005176|Ga0066679_10287677All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1066Open in IMG/M
3300005177|Ga0066690_10605988All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria731Open in IMG/M
3300005184|Ga0066671_10748847All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium628Open in IMG/M
3300005340|Ga0070689_100932871All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium769Open in IMG/M
3300005347|Ga0070668_100013159All Organisms → cellular organisms → Bacteria → Proteobacteria6168Open in IMG/M
3300005355|Ga0070671_100597776All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium953Open in IMG/M
3300005364|Ga0070673_101114596All Organisms → cellular organisms → Bacteria737Open in IMG/M
3300005365|Ga0070688_100885751All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium703Open in IMG/M
3300005367|Ga0070667_102349448All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria502Open in IMG/M
3300005434|Ga0070709_11217599All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium605Open in IMG/M
3300005456|Ga0070678_100038763All Organisms → cellular organisms → Bacteria → Proteobacteria3357Open in IMG/M
3300005457|Ga0070662_101828070All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300005530|Ga0070679_100263900All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1677Open in IMG/M
3300005547|Ga0070693_101496646All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium527Open in IMG/M
3300005548|Ga0070665_101790771All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300005548|Ga0070665_101908396All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria600Open in IMG/M
3300005563|Ga0068855_101963901All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria592Open in IMG/M
3300005564|Ga0070664_100311216All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1425Open in IMG/M
3300005577|Ga0068857_102374968All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria521Open in IMG/M
3300005578|Ga0068854_100140926All Organisms → cellular organisms → Bacteria → Proteobacteria1850Open in IMG/M
3300005616|Ga0068852_102581833All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria528Open in IMG/M
3300005617|Ga0068859_100781129All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1043Open in IMG/M
3300005617|Ga0068859_101781510All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium680Open in IMG/M
3300005718|Ga0068866_10970764All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium602Open in IMG/M
3300005764|Ga0066903_108431800All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria526Open in IMG/M
3300005841|Ga0068863_100003615All Organisms → cellular organisms → Bacteria → Proteobacteria15266Open in IMG/M
3300005841|Ga0068863_100734958All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium982Open in IMG/M
3300005842|Ga0068858_101196633All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium747Open in IMG/M
3300005842|Ga0068858_101971584All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria577Open in IMG/M
3300005843|Ga0068860_100055148All Organisms → cellular organisms → Bacteria → Proteobacteria3777Open in IMG/M
3300005843|Ga0068860_101317496All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium743Open in IMG/M
3300006358|Ga0068871_101397261All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium660Open in IMG/M
3300006804|Ga0079221_10372491All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium872Open in IMG/M
3300006847|Ga0075431_100651117All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1034Open in IMG/M
3300006852|Ga0075433_10369764All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1266Open in IMG/M
3300006854|Ga0075425_103085272All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria508Open in IMG/M
3300006871|Ga0075434_100260892All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1752Open in IMG/M
3300006871|Ga0075434_101383948All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria714Open in IMG/M
3300006903|Ga0075426_10523414All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium882Open in IMG/M
3300006904|Ga0075424_102501132All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria541Open in IMG/M
3300006954|Ga0079219_10373324All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium929Open in IMG/M
3300007076|Ga0075435_100943688All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria753Open in IMG/M
3300009012|Ga0066710_100135272All Organisms → cellular organisms → Bacteria → Proteobacteria3392Open in IMG/M
3300009137|Ga0066709_101986663All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium806Open in IMG/M
3300009156|Ga0111538_13369325All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria555Open in IMG/M
3300009553|Ga0105249_10309524All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1587Open in IMG/M
3300010320|Ga0134109_10279532All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium637Open in IMG/M
3300012208|Ga0137376_11545422All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria555Open in IMG/M
3300012349|Ga0137387_11227181All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria528Open in IMG/M
3300012350|Ga0137372_10074306All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2915Open in IMG/M
3300012505|Ga0157339_1070501All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria503Open in IMG/M
3300012984|Ga0164309_11444402All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium588Open in IMG/M
3300012987|Ga0164307_11326938All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria602Open in IMG/M
3300013308|Ga0157375_10363605All Organisms → cellular organisms → Bacteria → Proteobacteria1613Open in IMG/M
3300013308|Ga0157375_13273859All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria540Open in IMG/M
3300014325|Ga0163163_10503728All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1273Open in IMG/M
3300014745|Ga0157377_10250562All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1147Open in IMG/M
3300014968|Ga0157379_12411615All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria525Open in IMG/M
3300015372|Ga0132256_100306349All Organisms → cellular organisms → Bacteria → Proteobacteria1674Open in IMG/M
3300015373|Ga0132257_100321710All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1863Open in IMG/M
3300016341|Ga0182035_10031498All Organisms → cellular organisms → Bacteria → Proteobacteria3431Open in IMG/M
3300016371|Ga0182034_11426274All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria606Open in IMG/M
3300017792|Ga0163161_10067530All Organisms → cellular organisms → Bacteria → Proteobacteria2611Open in IMG/M
3300018482|Ga0066669_11081141All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium724Open in IMG/M
3300020006|Ga0193735_1052692All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1206Open in IMG/M
3300021080|Ga0210382_10180064All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium914Open in IMG/M
3300021088|Ga0210404_10833706All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium527Open in IMG/M
3300021445|Ga0182009_10116221All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1238Open in IMG/M
3300022756|Ga0222622_10977651All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium622Open in IMG/M
3300025893|Ga0207682_10613676All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria512Open in IMG/M
3300025899|Ga0207642_10894067All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria569Open in IMG/M
3300025906|Ga0207699_10318774All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1090Open in IMG/M
3300025909|Ga0207705_10111127All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2025Open in IMG/M
3300025909|Ga0207705_10566409All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium883Open in IMG/M
3300025919|Ga0207657_11159317All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium589Open in IMG/M
3300025923|Ga0207681_10092067All Organisms → cellular organisms → Bacteria → Proteobacteria2167Open in IMG/M
3300025933|Ga0207706_10619210All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium929Open in IMG/M
3300025936|Ga0207670_10706400All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium835Open in IMG/M
3300025937|Ga0207669_10120363All Organisms → cellular organisms → Bacteria → Proteobacteria1780Open in IMG/M
3300025940|Ga0207691_11612496All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria527Open in IMG/M
3300025942|Ga0207689_10488310All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1031Open in IMG/M
3300025945|Ga0207679_10288541All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1410Open in IMG/M
3300025945|Ga0207679_10848463All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium834Open in IMG/M
3300025945|Ga0207679_11328929All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium660Open in IMG/M
3300025972|Ga0207668_10059234All Organisms → cellular organisms → Bacteria → Proteobacteria2682Open in IMG/M
3300025972|Ga0207668_10285445All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1355Open in IMG/M
3300025981|Ga0207640_10280995All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1307Open in IMG/M
3300026023|Ga0207677_10254131All Organisms → cellular organisms → Bacteria → Proteobacteria1429Open in IMG/M
3300026023|Ga0207677_10671775All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium916Open in IMG/M
3300026035|Ga0207703_12156232All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria533Open in IMG/M
3300026041|Ga0207639_12082561All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria529Open in IMG/M
3300026067|Ga0207678_10206924All Organisms → cellular organisms → Bacteria1678Open in IMG/M
3300026067|Ga0207678_11988553All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria506Open in IMG/M
3300026089|Ga0207648_10009251All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria9464Open in IMG/M
3300026116|Ga0207674_11721056All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria595Open in IMG/M
3300026121|Ga0207683_10024019All Organisms → cellular organisms → Bacteria → Proteobacteria5246Open in IMG/M
3300026142|Ga0207698_10099787All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2403Open in IMG/M
3300026480|Ga0257177_1039627All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium713Open in IMG/M
3300026550|Ga0209474_10419557All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria689Open in IMG/M
3300027722|Ga0209819_10326307All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria526Open in IMG/M
3300027812|Ga0209656_10547028All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria501Open in IMG/M
3300027841|Ga0209262_10123520All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1229Open in IMG/M
3300028379|Ga0268266_11481707All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria654Open in IMG/M
3300028381|Ga0268264_10386722All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1341Open in IMG/M
(restricted) 3300031248|Ga0255312_1173941All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria540Open in IMG/M
3300031720|Ga0307469_10121318All Organisms → cellular organisms → Bacteria → Proteobacteria1891Open in IMG/M
3300031736|Ga0318501_10151764All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1193Open in IMG/M
3300031768|Ga0318509_10267969All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium954Open in IMG/M
3300031777|Ga0318543_10115753All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1161Open in IMG/M
3300031778|Ga0318498_10205253All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium893Open in IMG/M
3300031782|Ga0318552_10160557All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1131Open in IMG/M
3300031799|Ga0318565_10079506All Organisms → cellular organisms → Bacteria → Proteobacteria1557Open in IMG/M
3300031805|Ga0318497_10063145All Organisms → cellular organisms → Bacteria → Proteobacteria1933Open in IMG/M
3300031879|Ga0306919_10070653All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2377Open in IMG/M
3300031892|Ga0310893_10515370All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria538Open in IMG/M
3300031908|Ga0310900_10777555All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium773Open in IMG/M
3300031918|Ga0311367_11205884All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium751Open in IMG/M
3300031938|Ga0308175_101595185All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium730Open in IMG/M
3300031942|Ga0310916_10032440All Organisms → cellular organisms → Bacteria → Proteobacteria3848Open in IMG/M
3300031942|Ga0310916_10613014All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium924Open in IMG/M
3300032039|Ga0318559_10045379All Organisms → cellular organisms → Bacteria → Proteobacteria1821Open in IMG/M
3300032090|Ga0318518_10612476All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria555Open in IMG/M
3300033004|Ga0335084_11675830All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria625Open in IMG/M
3300033290|Ga0318519_10153305All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1289Open in IMG/M
3300033290|Ga0318519_11063752All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria504Open in IMG/M
3300033408|Ga0316605_12158013All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria542Open in IMG/M
3300033482|Ga0316627_101381607Not Available706Open in IMG/M
3300033550|Ga0247829_10728905All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium825Open in IMG/M
3300033551|Ga0247830_11644912All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria514Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil11.28%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere8.27%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere7.52%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere7.52%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.77%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere6.02%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere4.51%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.01%
FreshwaterEnvironmental → Aquatic → Freshwater → Pond → Sediment → Freshwater2.26%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.26%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.26%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.26%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.26%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.26%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.26%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.26%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.26%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.26%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.50%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.50%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere1.50%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.75%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.75%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.75%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.75%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.75%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.75%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.75%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.75%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.75%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.75%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.75%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.75%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.75%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.75%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.75%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.75%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.75%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.75%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300004155Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012505Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.yng.090610Host-AssociatedOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026480Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-BEnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300027722Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027812Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027841Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11 (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031248 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031768Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22EnvironmentalOpen in IMG/M
3300031777Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24EnvironmentalOpen in IMG/M
3300031778Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24EnvironmentalOpen in IMG/M
3300031782Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20EnvironmentalOpen in IMG/M
3300031799Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21EnvironmentalOpen in IMG/M
3300031805Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031892Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031918III_Fen_N3 coassemblyEnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300032039Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21EnvironmentalOpen in IMG/M
3300032090Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M
3300033408Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCTEnvironmentalOpen in IMG/M
3300033482Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_CEnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
F14TB_10699017313300001431SoilDPRSGRVETVAVPGYVIWPDDRHGGMPPVGFGLFRALEGGYELWLAGLEFTQRGGGHGRALLASLMSTPPGQKTYVVRVQRGSRYVATVTHLLDTLGFDGVGDTSKLRWFVRRDAPVALSARIRAAVNARRAPNS*
Ga0066600_1004212313300004155FreshwaterLVTGYFVETDARTGRIDTVAVPGYVFWPDGRNSSTAPAGFGLFRALEDGGYELWLAGLEFAERGGGMGRSLLSSLLATPPGQNTWVVRIARESRYGATVAHLLDGLGFDVVGDTARLRWFVRRDAPPELAARIRGGTRAPSAGNVN*
Ga0066600_1008480313300004155FreshwaterFRAIEDGGYELWLAGLEFAERGGGLGRALLSSLLATPPGQSTWVVRISRESRYGAAVAHLLDGLGFDVAGDTARLRWFVRRDAPPALAARIRGGTQAPSDRAIN*
Ga0066677_1058080913300005171SoilFDKLKRALVTGYFVEQDPRSGRIETVAVPGYVFWPDDRHSGLPPIGFGLFRALEGGYELWLAGLEFTKRGGGNGRALLGSLMSTPPGQKTYVVRVQRTSRYVQTVTHLLDTLGFDAVGDTARLRWFVRRDAPVALSARIRGAVNARRQPG*
Ga0066679_1028767723300005176SoilDFFEKLKRALVTGYFVEQDPRSGRIETIAVPGYVFWPDDRHSGLPPVGFGLFRALEGGYELWLAGLEFGKRGGGHGRALLASLMSTPPGQKTYVVRVQRTSRYVHAVTHLLDTLGFDAVGETTRLRWFVRRDAPVALSARIRGAVNARRAPG*
Ga0066690_1060598813300005177SoilGRIETIAVPGYVFWPDDRHSGLPPVGFGLFRALEGGYELWLAGLEFGKRGGGHGRALLASLMSTPPGQKTYVVRVQRTSRYVHAVTHLLDTLGFDAVGETTRLRWFVRRDAPVTLSARIRGAVNARRAPG*
Ga0066671_1074884723300005184SoilGLPPIGFGLFRALEGGYELWLAGLEFGKRGAGHGRALLTSLMTTQPGQKTYVVRVQRTSRYVEAVAHLLDTLRFDSIGETARLRWFVRRDAPVALSARIRGAVNARRAPPAS*
Ga0070689_10093287113300005340Switchgrass RhizosphereFFEKLKRALVTGYFVEQDPRSGRIETVAVPGYVFWPDDRHGGMPPVGFGLFRALEGGYELWLAGLEFAQRGGGHGRALLASLMSTPPGQKTYVVRVQRTSRYVATVTHLLDTLGFDSVGDTARLRWFVRRDAPVALSARIRAAVNARRTPS*
Ga0070668_10001315953300005347Switchgrass RhizosphereALVTGYFVEQDPRSGRIETVAVPGYVFWPDDRHGGMPPVGFGLFRALEGGYELWLAGLEFTQRGGGQGRALLASLMSTPPGQKTYVVRVQRGSRYVATVTHLLDTLGFDSVGDTSKLRWFVRRDAPVALSARIRAAVNARRTPST*
Ga0070671_10059777613300005355Switchgrass RhizosphereFRALEGGYELWLAGLEFTKRGGGHGRALLASLMSTPPGQKTYVVRVQRTSRYVRTVAHLLDTLGFDGIGDTSRLRWFMRRDAPVALSARIRGAVNARRVPG*
Ga0070673_10111459613300005364Switchgrass RhizosphereVGFGLFRAIDDGYELWLAGLEFARRGDGHGRALLEALLATSCGQETHVVRVQRASRYVPQVTHLLKSLSFTPVGDTARLRWFVRDTAPPALAARIRNAVNAPRASA*
Ga0070688_10088575113300005365Switchgrass RhizosphereLAGLDFAQRGGGHGRALLASLMSTSPGQKTYVVRIQRASRYVHAVTHLLDTLGFAAVGETARLRWFVRRDAPATLAARIRGAVNARRVPG*
Ga0070667_10234944813300005367Switchgrass RhizosphereAVPGYVFWPDDRQGGTPPVGFGLFRALEGGYELWLAGLEFGQRGGGHGRELLASLMSTPPGQKTYVVRVQRTSRYVATVTHLLDTLGFDAVGDTARLRWFVRRDAPVALSARIRAAVNARRTPS*
Ga0070709_1121759923300005434Corn, Switchgrass And Miscanthus RhizosphereGFGLFRALDHGYELWLAGLEFARRGGGQGRALLDALFSTAPGQKTYVVRVQRASRYLPQVTHLMQTMRFTSVGDTARLRWFVRDDAPPALAARIREAVSARRPVN*
Ga0070678_10003876313300005456Miscanthus RhizospherePDGRHGGSPPVGFGLFRALEGGYELWLAGLDFAQRGGGHGRALLASLMSTSPGQKTYVVRIQRASRYVHAVTHLLDTLGFAAVGETARLRWFVRRDAPATLAARIRGAVNARRVPG*
Ga0070662_10182807023300005457Corn RhizosphereAIDDGYELWLAGLEFARRGDGHGRALLEALLATSCGQETHVVRVQRASRYVPQVTHLLKSLSFTPVGDTARLRWFVRDTAPPALAARIRNAVNAPRASA*
Ga0070679_10026390013300005530Corn RhizosphereDPRSGRIDTVAVPGYVFWPDDREGSMPPVGFGLFRALEDGYELWLAGLEFARRGDGQGRALLEALLATPPGQKTHVVRVQRASRYVPQVTHLLASLRFANAGDTARLRWFVHADAPPALAAKVHAAISRRATN*
Ga0070693_10149664613300005547Corn, Switchgrass And Miscanthus RhizosphereGMPPVGFGLFRALEGGYELWLAGLEFAQRGGGHGRALLASLMSTPPGQKTYVVRVQRTSRYVATVTHLLDTLGFDSVGDTARLRWFVRRDAPVALSARIRAAVNARRTPS*
Ga0070665_10179077113300005548Switchgrass RhizosphereVAVPGYVFWPDDRHSGMPPVGFGLFRAIDDGYELWLAGLEFARRGDGHGRALLEALLATSCGQETHVVRVQRASRYVPQVTHLLKSLSFTPVGDTARLRWFVRDSAPPALVARIRNAVNAPRASD*
Ga0070665_10190839613300005548Switchgrass RhizosphereAADFFEKLKRALVTGYFVEQDPRLGRIETVAVPGYVFWPDDRHGGMPPVGFGLFRALESGYELWLAGLEFTQRGGGHGRALLASLMSTPPGQKTYVVRIQRASRYAAAVTHLLDTLGFDAVGDTSRLRWFVRRDAPVALSARIRAAVNARRAQPDS*
Ga0068855_10196390113300005563Corn RhizosphereTVAVPGYVFWPDDRHSGMPPVGFGLFRALHDGYELWLAGLEFARRGGGHGRALLEALFGTPPGQKTYIVRVQRASRYVPQVTHLLESMRFTSVGDTARLRWFLRNDAPPALAARIREAVSARRPAN*
Ga0070664_10031121613300005564Corn RhizosphereWPDDRHSGLPPVGFGLFRALEGGYELWLAGLEFTKRGGGHGRALLASLMSTPPGQKTYVVRVQRTSRYVRTVAHLLDTLGFDGIGDTSRLRWFMRRDAPVALSARIRGAVNARRVPG*
Ga0068857_10237496813300005577Corn RhizosphereVEHDARTGRIDTVAVPGYVFWPDDRHSGMPPVGFGLFRALHDGYELWLAGLEFARRGGGHGRALLEALFGTPPGQKTYIVRVQRASRYVPQVTHLLESMRFTSVGDTARLRWFLRNDAPPALAARIREAVSARRPAN*
Ga0068854_10014092613300005578Corn RhizosphereDDRHGGMPPVGFGLFRALEGGYELWLAGLEFAQRGGGHGRALLASLMSTPPGQKTYVVRVQRTSRYVATVTHLLDTLGFDSVGDTARLRWFVRRDAPVALSARIRAAVNARRTPS*
Ga0068852_10258183323300005616Corn RhizosphereALVTGYFVETDPRTGRIDTVAVPGYVFWPDDRHSGMPPVGFGLFRAIDDGYELWLAGLEFARRGDGHGRALLEALLATSCGQETHVVRVQRASRYVPQVTHLLKSLSFKPVGDTARLRWFVRDTAPAALVARIRHAVNAPRASD*
Ga0068859_10078112923300005617Switchgrass RhizosphereGFGLFRALEGGYELWLAGLEFAQRGGGHGRALLASLMSTPPGQKTYVVRVQRTSRYVATVTHLLDTLGFDSVGDTARLRWFVRRDAPVALSARIRAAVNARRTPS*
Ga0068859_10178151023300005617Switchgrass RhizosphereAVPGYVFWPDGRHGGSPPVGFGLFRALEGGYELWLAGLDFAQRGGGHGRALLASLMSTSPGQKTYVVRIQRASRYVHAVTHLLDTLGFAAVGETARLRWFVRRDAPATLAARIRGAVNARRVPG*
Ga0068866_1097076413300005718Miscanthus RhizosphereYELWLAGLEFTQRGGGHGRALLASLMSTPPGQKTYVVRIQRTSRYVAAVTHLLDTLGFDAVGDTSRLRWFVRRDAPVALSARIRAAVNARRTPS*
Ga0066903_10843180013300005764Tropical Forest SoilLKRALVTGYFVEHDPRTGRVDTVAVPGYVFWPDDRHSGMPPVGFGLFRALDQGYELWLAGLEFARRGGGHGRALLEALFATPSGQKTYVVRVQRASRYVPQVTHLLQSLRFASVGDTARLRWFVRDDAPPALAARIREAVSARRSVN*
Ga0068863_100003615163300005841Switchgrass RhizosphereHGGMPPVGFGLFRALEGGYELWLAGLEFAQRGGGHGRALLASLMSTPPGQKTYVVRVQRTSRYVATVTHLLDTLGFDSVGDTARLRWFVRRDAPVALSARIRAAVNARRTPS*
Ga0068863_10073495823300005841Switchgrass RhizosphereADFFDKLKRALVTGYFVEQDSRSGRLNTVAVPGYVFWPDGRHGGSPPVGFGLFRALEGGYELWLAGLDFAQRGGGHGRALLASLMSTSPGQKTYVVRIQRASRYVHAVTHLLDTLGFAAVGETARLRWFVRRDAPATLAARIRGAVNARRVPG*
Ga0068858_10119663313300005842Switchgrass RhizosphereFFEKLKRALVTGYFVEHDARTGRIDTVAVPGYVFWPDDRHSGMPPVGFGLFRALHDGYELWLAGLEFARRGGGHGRALLEALFGTPPGQKTYIVRVQRASRYVPQVTHLLKSLSFTPVGDTARLRWFVRDSAPPALAARIRNAVNAPRASA*
Ga0068858_10197158423300005842Switchgrass RhizosphereRSGRIETVAVPGYVFWPDDRQGGAPPVGFGLFRALEGGYELWLAGLEFAQRGGGHGRALLASLMSTPPGQKTYVVRVQRTSRYVATVTHLLDTLGFDSVGDTTRLRWFVRRDAPVALSARIRAAVNARRTPT*
Ga0068860_10005514813300005843Switchgrass RhizosphereFGLFRALEGGYELWLAGLEFAQRGGGHGRALLASLMSTPPGQKTYVVRVQRTSRYVATVTHLLDTLGFDSVGDTARLRWFVRRDAPVALSARIRAAVNARRTPS*
Ga0068860_10131749613300005843Switchgrass RhizosphereWPDDRQGGTPPVGFGLFRALEGGYELWLAGLEFGQRGGGHGRELLASLMSTPPGQKTYVVRVQRTSRYVATVTHLLDTLGFDAVGDTARLRWFVRRDAPVALSARIRSAVNARRTPS*
Ga0068871_10139726123300006358Miscanthus RhizosphereRALEGGYELWLAGLEFAQRGGGHGRALLASLMSTPPGQKTYVVRVQRTSRYVATVTHLLDTLGFDSVGDTTRLRWFVRRDAPVALSARIRAAVNARRTPT*
Ga0079221_1037249113300006804Agricultural SoilHSGMPPVGFGLFRALDHGYELWLAGLEFARRGGGQGRALLDALFSTAPGQKTYVVRVQRASRYLPQVTHLMQTMRFTSVGDTARLRWFVRDDAPPALAARIREAVSARRPVN*
Ga0075431_10065111723300006847Populus RhizosphereSGRIETVAVPGYVFWPDDRHGGMPPVGFGLFRALEGGYELWLAGLEFTQRGGGHGRALLASLMSTPPGQKTYVVRVQRGSRYVATVTHLLDTLGFDSVGDTSKLRWFVRRDAPVALSARIRAAVNARRAPNA*
Ga0075433_1036976423300006852Populus RhizosphereGYELWLAGLEFGKRGGGHGRALLGSLMSTPPGQKTYVVRVQRTSRYVQTVTHLLDTLGFDTVGDTTRLRWFVRRDAPVALSARIRGAVNARRQPG*
Ga0075425_10308527223300006854Populus RhizosphereETVAVPGYVFWPDDRHGGMPPVGFGLFRALEGGYELWLAGLEFTQRGGGHGRALLASLMSTPPGQKTYVVRIQRASRYVAAVTHLLDTLGFDSVGDTARLRWFVRRDAPVALSARIRAAVNARRAPKT*
Ga0075434_10026089213300006871Populus RhizosphereIETIAVPGYVFWPDDRHSGLPPIGFGLFRALEGGYELWLAGLEFTKRGGGHGRALLASLMSTPPGQKTYVVRVQRTSRYVQTVTHLLDTLGFDAIGDTSRLRWFMRRDAPVALSARIRGAVNARRAPT*
Ga0075434_10138394813300006871Populus RhizosphereEKLKRALVTGYFVEQDPRSGRIETVAVPGYVFWPDDRHGGMPPVGFGLFRALEGGYELWLAGLEFTQRGGGHGRALLASLMSTPPGQKTYVVRVQRGSRYVATVTHLLDTLGFDGVGDTSKLRWFVRRDAPVALSARIRAAVNARRAPKT*
Ga0075426_1052341423300006903Populus RhizosphereIAVPGYVFWPDDRHAGLPPIGFGLFRALEGGYELWLAGLEFGKRGGGHGRALLASLMSTPPGQKTYVVRVQRTSRYVQTVTHLLDTLGFDAVGETARLRWFVRRDAPVALAARIRGAVNARRITPDSAPSS*
Ga0075424_10250113213300006904Populus RhizosphereYVFWPDDRHGGMPPVGFGLFRALEGGYELWLAGLEFTQRGGGHGRALLASLMSTPPGQKTYVVRVQRGSRYVATVTHLLDTLGFDGVGDTSKLRWFVRRDAPVALSARIRAAVNARRAPNP*
Ga0079219_1037332423300006954Agricultural SoilAGLEFTKRGGGHGRALLASLMSTPPGQKTYVVRVQRTSRYVRTVAHLLDTLGFDGIGDTSRLRWFMRRDAPVALSARIRGAVNARRVPG*
Ga0075435_10094368813300007076Populus RhizosphereKLKRALVTGYFVEQDPRSGRIETIAVPGYVFWPDDRHSGLPPIGFGLFRALEGGYELWLAGLEFTKRGGGHGRALLASLMSTPPGQKTYVVRVQRTSRYVQTVTHLLDTLGFDAIGDTSRLRWFMRRDAPVALSARIRGAVNARRAPT*
Ga0066710_10013527213300009012Grasslands SoilRSGRIETVAVPGYVFWPDDRSGGSPPVGFGLFRALEGGYELWLAGLEFARRGGGHGRALLEALMSTPPGQKTYVVRIQRDSRYVQAVSHLLDALGFDAVGETSRLRWFVRRDAPVALSARIRGAVNARHAPS
Ga0066709_10198666313300009137Grasslands SoilRHSGLTPIGFGLFRALEGGYELWRAALDFGKRGGGHGRALLGSLMSTPSGQKTYVVRVQRTSRYVRAVTHLLDTLGFDSVGETTRLRWFVRRDAPVALSARIRGAVNARRAPA*
Ga0111538_1336932513300009156Populus RhizosphereHSGMPPVGFGLFRAIDDGYELWLAGLEFARRGDGHGRALLEALLATSCGQETHVVRVQRASRYVPQVTHLLKSLSFTPVGDTARLRWFVRDSAPPALAARIRNAVNAPRASA*
Ga0105249_1030952413300009553Switchgrass RhizosphereKRALVTGYFVEHDPRSGRIETVAVPGYVFWPDDRQGGTPPVGFGLFRALEGGYELWLAGLEFGQRGGGHGRELLASLMSTPPGQKTYVVRVQRTSRYVATVTHLLDTLGFDAVGDTARLRWFVRRDAPVALSARIRSAVNARRTPS*
Ga0134109_1027953223300010320Grasslands SoilLEGGYELWLAGLEFGKRGGGHGRALLGSLMSTPSGQKTYVVRVQRTSRYVRAVTHLLDTLGFDSVGETTRLRWFVRRDEPVALSARIAPPSGAEGRA*
Ga0137376_1154542223300012208Vadose Zone SoilPDDRHSGLPPIGFGLFRALEGGYELWLAGLEFGKRGGGHGRALLASLMSTPPGQKTYVVRVQRTSRYVQAVTHLLDTLGFDSVGETTRLRWFVRRDAPVALSARIRGAVNARRVPR*
Ga0137387_1122718113300012349Vadose Zone SoilDRSGGSPPVGFGLFRALEGGYELWLAGLEFARRGGGHGRALLEALMSTPPGQKTYVVRIQRDSRYVQAVSHLLDTLGFDAVGETSRLRWFVRRDAPVALSARIRGAVNARHAPS*
Ga0137372_1007430633300012350Vadose Zone SoilPPVGFGLFRALEDGGYELWLAGLELGERGNGNGRALLVALLATPPGQKTWVVRIPRESRYVIAVQHVLCDLGFDCAGDTARLRWFVRRDAPAALASRIRGGVQSRAALN*
Ga0157339_107050123300012505Arabidopsis RhizosphereGLFRALEGGYELWLAGLEFAQRGGGHGRALLASLMSTPPGQKTYVVRIQRASRYVAAVTHLLDTLGFDSVGDTSRLRWFVRRDAPVALSARIRAAVNARRAQPSS*
Ga0164309_1144440223300012984SoilRAIDDGYELWLAGLEFARRGDGHGRALLEALLATSCGQETHVVRVQRASRYVPQVTHLLKSLSFTPVGDTARLRWFVRDSAPPALAARIRNAVNAPRASD*
Ga0164307_1132693813300012987SoilALVTGYFVETDPRTGRIDTVAVPGYVFWPDDRHSGMPPVGFGLFRAIDDGYELWLAGLEFARRGDGHGRALLEALLATSCGQETHVVRVQRASRYVPQVTHLLKSLSFTPVGDTARLRWFVRDSAPPALVARIRNAVNAPRASD*
Ga0157375_1036360513300013308Miscanthus RhizosphereKRALVTGYFVEQDSRSGRLNTVAVPGYVFWPDGRHGGSPPVGFGLFRALEGGYELWLAGLDFAQRGGGHGRALLASLMSTSPGQKTYVVRIQRASRYVHAVTHLLDTLGFAAVGETARLRWFVRRDAPATLAARIRGAVNARRVPG*
Ga0157375_1327385913300013308Miscanthus RhizosphereKLKRALVTGYFVEEGRSGRIDTIAVPGYVYWPDDRNTGTQPVGFGLFRAIDDGYELWLAGLEFARRGDGHGRALLEALLATSCGQETHVVRVQRASRYVPQVTHLLKSLSFTPIGDTKRLRWFVRDGAPPALVARIRNAVDAPRSLD*
Ga0163163_1050372823300014325Switchgrass RhizosphereRSGRIETVAVPGYVFWPDDRQGGMPPVGFGLFRALESGYELWLAGLEFTQRGGGHGRALLASLMSTPPGQKTYVVRIQRASRYVAAVTHLLDTLGFDSVGDTSRLRWFVRRDAPVALSARIRAAVNARRAQPNS*
Ga0157377_1025056213300014745Miscanthus RhizosphereTDPRTGRIDTVAVPGYVFWPDDRHSGMPPVGFGLFRAIDDGYELWLAGLEFARRGDGHGRALLEALLATSCGQETHVVRVQRASRYVPQVTHLLKSLSFTPVGDTARLRWFVRDTAPPALAARIRNAVNAPRASA*
Ga0157379_1241161523300014968Switchgrass RhizosphereVGFGLFRALEGGYELWLAGLEFAQRGGGHGRALLASLMSTPPGQKTYVVRVQRTSRYVATVTHLLDTLGFDSVGDTARLRWFVRRDAPVALSARIRAAVNARRTPS*
Ga0132256_10030634933300015372Arabidopsis RhizosphereLAGLEFGKRGGGHGRALLGSLMSTPPGQKTYVVRVQRTSRYVQTVTHLLDTLGFDAVGDTARLRWFVRRDAPVALSARIRGAVNARRQPG*
Ga0132257_10032171013300015373Arabidopsis RhizosphereVTVEARRPASDFFRALDDGGYELWLAGLDFGERGAGNGRALIAALLATPPGQKTWGVRIPRESPYAMVVRRVVAASEFDCVGDSAHQRWFLRRDAPAALASRICGGLQSRVVVN*
Ga0182035_1003149843300016341SoilWPDDRNSGTPPVGFGLFRAMDGGYELWLAGLEFAKRGGGNGRALLEALFATPPGQRTYVVRIQRASRYVRQVAHLLDTLGFDVIGDTARLRWFVRRDAPPALGARIRGAVNARRTVN
Ga0182034_1142627413300016371SoilEANEFFDKLKRALVTGYFVEMDSRTGKIDTVAVPGYVFWPDDRNSGTPPVGFGLFRAMDGGYELWLAGLEFAKRGGGNGRALLEALFATPPGQRTYVVRIQRASRYVRQVAHLLDTLGFDVIGDTARLRWFVRRDAPPALGARIRGAVNARRTVN
Ga0163161_1006753043300017792Switchgrass RhizosphereVFWPDDRHGGMPPVGFGLFRALEGGYELWLAGLEFAQRGGGHGRALLASLMSTPPGQKTYVVRVQRTSRYVATVTHLLDTLGFDSVGDTARLRWFVRRDAPVALSARIRAAVNARRTPS
Ga0066669_1108114113300018482Grasslands SoilIGFGLFRALEGGYELWLAGLEFGKRGGGHGRALLASLMSTPPGQKTYVVRVQRTSRYVQAVTHLLDTLGFDSVGETTRLRWFVRRDAPVALSARIRGAVNARRVPR
Ga0193735_105269223300020006SoilTIAVPGYVFWPDDRHSGVPPIGFGLFRALEGGYELWLAGLEFGERGGGHGRVLLASLMSTPPGQKTYVVRVQRTSRYVNAVTHLLDTLGFDSVGETARLRWFVRRDAPVALSARIRGAVNARRTPA
Ga0210382_1018006423300021080Groundwater SedimentYVFWPDDRPGGSPPVGFGLFRALEGGYELWLAGLEFARRGGGHGRALLEALMSTPPGQKTYVVRIQRDSRYVQAVAHLLDTLGFDSVGETSRLRWFVRRDAPVALSARIRGAVNARHAPS
Ga0210404_1083370623300021088SoilGGLPPVGFGLFRALEGGYELWLAGLEFAQRGGGHGRALLASLMSTPPGQRTYVVRIQRTSRYVHAVTHLLDTLGFDAIGETSRLRWFMRRDAPVALSARIRGAVNARRAPPS
Ga0182009_1011622113300021445SoilVETDPRTGRVDTVAVPGYVFWPDDRHSGMPPVGFGLFRAIDDGYELWLAGLEFARRGDGHGRALLEALLATPCGQETHVVRVQRASRYVPQVTHLLKSLAFTPVGDTTRLRWFVRDTAPPALAAPIRNAVNARPASA
Ga0222622_1097765113300022756Groundwater SedimentPIGFGLFRALEGGYELWLAGLEFGKRGGGHGRSLLASLMSTPPGQKTYVVRVQRTSRYVQAVTHLLDTLGFDSVGETTRLRWFVRRDAPVALSARIRGAVNARRVPR
Ga0207682_1061367613300025893Miscanthus RhizosphereLWLAGLEFARRGDGHGRALLEALLATSCGQETHVVRVQRASRYVPQVTHLLKSLSFTPVGDTARLRWFVRDSAPPALAARIRNAVNAPRASD
Ga0207642_1089406713300025899Miscanthus RhizosphereGYELWLAGLEFTQRGGGHGRALLASLMSTPPGQKTYVVRIQRTSRYVAAVTHLLDTLGFDAVGDTSRLRWFVRRDAPVALSARIRAAVNARRTPS
Ga0207699_1031877413300025906Corn, Switchgrass And Miscanthus RhizosphereGFGLFRALDHGYELWLAGLEFARRGGGQGRALLDALFSTAPGQKTYVVRVQRASRYLPQVTHLMQTMRFTSVGDTARLRWFVRDDAPPALAARIREAVSARRPVN
Ga0207705_1011112733300025909Corn RhizosphereLWLAGLEFARRGDGHGRALLEALLATSCGQETHVVRVQRASRYVPQVTHLLKSLSFTPVGDTARLRWFVRDTAPPALAARIRNAVNAPRASA
Ga0207705_1056640913300025909Corn RhizosphereLVTGYFVEQDPRSGRIETVAVPGYVFWPDDRHGGMPPVGFGLFRALEGGYELWLAGLEFAQRGGGHGRALLASLMSTPPGQKTYVVRVQRTSRYVATVTHLLDTLGFDSVGDTARLRWFVRRDAPVALSARIRAAVNARRTPS
Ga0207657_1115931713300025919Corn RhizosphereGLEFARRGDGHGRALLEALLATSCGQETHVVRVQRASRYVPQVTHLLKSLSFTPVGDTARLRWFVRDSAPPALAARIRNAVNAPRASA
Ga0207681_1009206713300025923Switchgrass RhizosphereFRALEGGYELWLAGLEFAQRGGGHGRALLASLMSTPPGQKTYVVRVQRTSRYVATVTHLLDTLGFDSVGDTARLRWFVRRDAPVALSARIRAAVNARRTPS
Ga0207706_1061921013300025933Corn RhizosphereWRIDSVAVPGYVFWPDDRHSGMPPVGFGLFRALDHGYELWLAGLEFARRGGGQGRALLDALFSTAPGQKTYVVRVQRASRYLPQVTHLMQTMRFTSVGDTARLRWFVRDDAPPALAARIREAVSARRPVN
Ga0207670_1070640013300025936Switchgrass RhizosphereKLKRALVTGYFVEQDPRSGRIETVAVPGYVFWPDDRHGGMPPVGFGLFRALEGGYELWLAGLEFAQRGGGHGRALLASLMSTPPGQKTYVVRVQRTSRYVATVTHLLDTLGFDSVGDTARLRWFVRRDAPVALSARIRAAVNARRTPS
Ga0207669_1012036313300025937Miscanthus RhizosphereRAVAGGLEFAQRGGGHGRALLASLMSTPPGQKTYVVRVQRTSRYVATVTHLLDTLGFDSVGDTARLRWFVRRDAPVALSARIRAAVNARRTPS
Ga0207691_1161249623300025940Miscanthus RhizosphereLNTVAVPGYVFWPDGRHGGSPPVGFGLFRALEGGYELWLAGLDFAQRGGGHGRALLASLMSTSPGQKTYVVRIQRASRYVHAVTHLLDTLGFAAVGETARLRWFVRRDAPATLAARIRGAVNARRVPG
Ga0207689_1048831013300025942Miscanthus RhizosphereLPPVGFGLFRALDGGYELWLAGLEFTKRGGGHGRALLASLMSTPPGQKTYVVRVQRTSRYVRTVAHLLDTLGFDGIGDTSRLRWFMRRDAPVALSARIRGAVNARRVPG
Ga0207679_1028854123300025945Corn RhizosphereWPDDRHSGLPPVGFGLFRALDGGYELWLAGLEFTKRGGGHGRALLASLMSTPPGQKTYVVRVQRTSRYVRTVAHLLDTLGFDGIGDTSRLRWFMRRDAPVALSARIRGAVNARRVPG
Ga0207679_1084846313300025945Corn RhizosphereGTPPVGFGLFRAIDDGYELWLAGLEFARRGDGHGRALLEALLATSCGQETHVVRVQRASRYVPQVTHLLKSLSFAPVGDTARLRWFVRDTAPPALAARIRNAVNAPRASA
Ga0207679_1132892913300025945Corn RhizosphereDGYELWLAGLEFARRGDGHGRALLEALLATSCGQETHVVRVQRASRYVPQVTHLLKSLSFTPVGDTARLRWFVRDSAPPALAARIRNAVNAPRASA
Ga0207668_1005923443300025972Switchgrass RhizosphereGYFVEQDPRSGRIETVAVPGYVFWPDDRQGGAPPVGFGLFRALEGGYELWLAGLEFAQRGGGHGRALLASLMSTPPGQKTYVVRVQRTSRYVATVTHLLDTLGFDSVGDTTRLRWFVRRDAPVALSARIRAAVNARRTPT
Ga0207668_1028544523300025972Switchgrass RhizosphereSGRIETVAVPGYVFWPDDRHGGMPPVGFGLFRALEGGYELWLAGLEFTQRGGGQGRALLASLMSTPPGQKTYVVRVQRGSRYVATVTHLLDTLGFDSVGDTSKLRWFVRRDAPVALSARIRAAVNARRTPST
Ga0207640_1028099513300025981Corn RhizosphereIETVAVPGYVFWPDDRHGGMPPVGFGLFRALEGGYELWLAGLEFAQRGGGHGRALLASLMSTPPGQKTYVVRVQRTSRYVATVTHLLDTLGFDSVGDTARLRWFVRRDAPVALSARIRAAVNARRTPS
Ga0207677_1025413113300026023Miscanthus RhizospherePPVGFGLFRALEGGYELWLAGLDFAQRGGGHGRALLASLMSTSPGQKTYVVRIQRASRYVHAVTHLLDTLGFAAVGETARLRWFVRRDAPATLAARIRGAVNARRVPG
Ga0207677_1067177513300026023Miscanthus RhizosphereRALESGYELWLAGLEFTQRGGGHGRALLASLMSTPPGQKTYVVRIQRASRYAAAVTHLLDTLGFDAVGDTSRLRWFVRRDAPVALSARIRAAVNARRAQPDS
Ga0207703_1215623213300026035Switchgrass RhizosphereWPDDRQGGTPPVGFGLFRALEGGYELWLAGLEFGQRGGGHGRELLASLMSTPPGQKTYVVRVQRTSRYVATVTHLLDTLGFDAVGDTARLRWFVRRDAPVALSARIRSAVNARRTPS
Ga0207639_1208256113300026041Corn RhizosphereFFEKLKRALVTGYFVEHDARTGRIDTVAVPGYVFWPDDRHSGMPPVGFGLFRALHDGYELWLAGLEFARRGGGHGRALLEALFGTPPGQKTYIVRVQRASRYVPQVTHLLESMRFTSVGDTARLRWFLRNDAPPALAARIREAVSARRPAN
Ga0207678_1020692413300026067Corn RhizosphereDRHSGMPPVGFGLFRAIDDGYELWLAGLEFARRGDGHGRALLEALLATSCGQETHVVRVQRASRYVPQVTHLLKSLSFTPVGDTARLRWFVRDSAPPALAARIRNAVNAPRASD
Ga0207678_1198855313300026067Corn RhizosphereVTGYFVEQDPRSGRIETVAVPGYVFWPDDRAGGSPPVGFGLFRALEGGYELWLAGLEFTQRGGGNGRALLASLMSTPPGQKTYVVRIQRASRYVAAVTHLLDTLGFDSVGDTSQLRWFVRRDAPVALSARIRAAVNARRAQANN
Ga0207648_1000925173300026089Miscanthus RhizosphereVAVPGYVFWPDDRHGGMPPVGFGLFRALEGGYELWLAGLEFAQRGGGHGRALLASLMSTPPGQKTYVVRVQRTSRYVATVTHLLDTLGFDSVGDTARLRWFVRRDAPVALSARIRAAVNARRTPS
Ga0207674_1172105613300026116Corn RhizosphereKLKRALVTGYFVEHDARTGRIDTVAVPGYVFWPDDRHSGMPPVGFGLFRALHDGYELWLAGLEFARRGGGHGRALLEALFGTPPGQKTYIVRVQRASRYVPQVTHLLESMRFTSVGDTARLRWFLRNDAPPALAARIREAVSARRPAN
Ga0207683_1002401953300026121Miscanthus RhizospherePDGRHGGSPPVGFGLFRALEGGYELWLAGLDFAQRGGGHGRALLASLMSTSPGQKTYVVRIQRASRYVHAVTHLLDTLGFAAVGETARLRWFVRRDAPATLAARIRGAVNARRVPG
Ga0207698_1009978733300026142Corn RhizosphereTGYFVETDPRTGRIDTVAVPGYVFWPDDRHSGMPPVGFGLFRAIDDGYELWLAGLEFARRGDGHGRALLEALLATSCGQETHVVRVQRASRYVPQVTHLLKSLSFTPVGDTARLRWFVRDTAPPALAARIRNAVGGPRASA
Ga0257177_103962713300026480SoilFDKLKRALVTGYFVEQDPRSGRIETVAVPGYVFWPDDRHGGLPPVGFGLFRALEGGYELWLAGLEFAQRGGGHGRALLASLMSTPPGQRTYVVRIQRTSRYVHAVTHLLDTLGFDAIGETSRLRWFMRRDAPVALSARIRGAVNARRAPPS
Ga0209474_1041955713300026550SoilIADWQPNRMNPPTSSRSWRALVTGYFVEQDPRSGRIETIAVPGYVFWPDDGHSGLPPIGFGLFRALEGGYELWLAGLEFTKRGGGHGRALLASLMSTPSGQKTYVVRMQRTSRYVQAVTHVLDTLGFDAVGETARLRWFVRRDAPVALSARIRGAVNARRQPG
Ga0209819_1032630713300027722Freshwater SedimentSADFFDKLKRALVTGYFVEQDPRSGRIETIAVPGYVFWPDDRHGGMPPVGFGLFRALEGGYELWLAGLEFAQRGGGHGRALLASLMSTPPGQKTYVVRIQRTSRYVHAVTHLLDSLGFDAVGETARLRWFVRRDAPISLAARIRAAVNARRAPNQGR
Ga0209656_1054702813300027812Bog Forest SoilVSGYFVEEDAKTGRIEAVAVPGYVFWPDDRNSGMPPVGFGLFRALEDGYELWLAGLEFGRRGGGHGRALLTALFGTPPGKKSWVVRIPRGSRYGPTVQHLLKSYGFDHAGDTTHLRWFVRRQAPASIAMRIRGAVGAHPPLN
Ga0209262_1012352023300027841FreshwaterAGFGLFRAIEDGGYELWLAGLEFAERGGGLGRALLSSLLATPPGQSTWVVRISRESRYGAAVAHLLDGLGFDVAGDTARLRWFVRRDAPPALAARIRGGTQAPSDRAIN
Ga0268266_1148170713300028379Switchgrass RhizosphereSGRIETVAVPGYVFWPDDRHGGMPPVGFGLFRALESGYELWLAGLEFTQRGGGHGRALLASLMSTPPGQKTYVVRIQRASRYAAAVTHLLDTLGFDAVGDTSRLRWFVRRDAPVALSARIRAAVNARRAQPDS
Ga0268264_1038672223300028381Switchgrass RhizosphereGYVFWPDDRQGGTPPVGFGLFRALEGGYELWLAGLEFGQRGGGHGRELLASLMSTPPGQKTYVVRVQRTSRYVATVTHLLDTLGFDAVGDTARLRWFVRRDAPVALSARIRSAVNARRTP
(restricted) Ga0255312_117394113300031248Sandy SoilVEQDPRSGRIETVAVPGYVFWPDDRHGGMPPVGFGLFRALEGGYELWLAGLEFTQRGGGHGRALLASLMSTPPGQKTYVVRIQRASRYAPAVTHLLDTLGFDSVGDTSRLRWFVRRDAPVALSARIRAAVNARRAQSGS
Ga0307469_1012131833300031720Hardwood Forest SoilVFWPDDRHGGLPPIGFGLFRALEGGYELWLAGLEFAQRGGGHGRALLASLMSTPPGQKTYVVRIQRASRYVHAVTHLLDTLGFDSIGETSRLRWFMRRDAPVALSARIRGAVNARRAAPS
Ga0318501_1015176423300031736SoilYELWLAGLEFAKRGGGNGRALLEALFATPPGQRTYVVRIQRASRYVRQVAHLLDTLGFDVIGDTARLRWFVRRDAPPALGARIRGAVNARRTVN
Ga0318509_1026796923300031768SoilFVEMDSRTGKIDTVAVPGYVFWPDDRNSGTPPVGFGLFRAMDGGYELWLAGLEFAKRGGGNGRALLEALFATPPGQRTYVVRIQRASRYVRQVAHLLDTLGFDVIGDTARLRWFVRRDAPPALGARIRGAVNARRTVN
Ga0318543_1011575323300031777SoilRAMDGGYELWLAGLEFAKRGGGNGRALLEALFATPPGQRTYVVRIQRASRYVRQVAHLLDTLGFDVIGDTARLRWFVRRDAPPALGARIRGAVNARRTVN
Ga0318498_1020525313300031778SoilYVFWPDDRNSGTPPVGFGLFRAMDGGYELWLAGLEFAKRGGGNGRALLEALFATPPGQRTYVVRIQRASRYVRQVAHLLDTLGFDVIGDTARLRWFVRRDAPPALGARIRGAVNARRTVN
Ga0318552_1016055723300031782SoilANEFFDKLKRALVTGYFVEMDSRTGKIDTVAVPGYVFWPDDRNSGTPPVGFGLFRAMDGGYELWLAGLEFAKRGGGNGRALLEALFATPPGQRTYVVRIQRASRYVRQVAHLLDTLGFDVIGDTARLRWFVRRDAPPALGARIRGAVNARRTVN
Ga0318565_1007950613300031799SoilTVAVPGYVFWPDDRNSGTPPVGFGLFRAMDGGYELWLAGLEFAKRGGGNGRALLEALFATPPGQRTYVVRIQRASRYVRQVAHLLDTLGFDVIGDTARLRWFVRRDAPPALGARIRGAVNARRTVN
Ga0318497_1006314513300031805SoilFWPDDRNSGTPPVGFGLFRAMDGGYELWLAGLEFAKRGGGNGRALLEALFATPPGQRTYVVRIQRASRYVRQVAHLLDTLGFDVIGDTARLRWFVRRDAPPALGARIRGAVNARRTVN
Ga0306919_1007065333300031879SoilDGGYELWLAGLEFAKRGGGNGRALLEALFATPPGQRTYVVRIQRASRYVRQVAHLLDTLGFDVIGDTARLRWFVRRDAPPALGARIRGAVNARRTVN
Ga0310893_1051537013300031892SoilFWPDDRHGGMPPVGFGLFRALEGGYELWLAGLEFTQRGGGQGRALLASLMSTPPGQKTYVVRVQRGSRYVATVTHLLDTLGFDAVGDTSKLRWFVRRNAPVALSARIRGAVNARRAPST
Ga0310900_1077755513300031908SoilLEGGYELWLAGLEFTQRGGGQGRALLASLMSTPPGQKTYVVRVQRGSRYVATVTHLLDTLGFDAVGDTSKLRWFVRRNAPVALSARIRGAVNARRAPST
Ga0311367_1120588413300031918FenFGLFRALENGYELWLAGLEFARRGGGHGRALLTALMASPPGQETWVVRIQRTSRYVQPVTHLLDSLGFDPIGDTARLRWYVRRNAPPTLAARIRSGVNARRIVS
Ga0308175_10159518523300031938SoilTEFFDKLKRALVTGYFVETDPRTGRIDTVAVPGYVFWPDDRHSGMPPVGFGLFRAIDDGYELWLAGLEFARRGDGHGRALLEALLATSCGQETHVVRVQRASRYVPQVTHLLKSLSFTTVGDTARLRWFVRDTAPPALTARIRNAVNAPRASA
Ga0310916_1003244013300031942SoilGYFVEMDSRTGKIDTVAVPGYVFWPDDRNSGTPPVGFGLFRAMDGGYELWLAGLEFAKRGGGNGRALLEALFATPPGQRTYVVRIQRASRYVRQVAHLLDTLGFDVIGDTARLRWFVRRDAPPALGARIRGAVNARRTVN
Ga0310916_1061301413300031942SoilDPRSGRIETVAVPGYVFWPDDRHGGMPPVGFGLFRALEGGYELWLAGLEFGQRGGGQGRALLASLMSTPPGQKTYVVRVQRGSRYIATVTHLLDTLGFDAVGDTSKVRWFVRRDAPVALSARIRAAVNARRAPNP
Ga0318559_1004537913300032039SoilGLFRAMDGGYELWLAGLEFAKRGGGNGRALLEALFATPPGQRTYVVRIQRASRYVRQVAHLLDTLGFDVIGDTARLRWFVRRDAPPALGARIRGAVNARRTVN
Ga0318518_1061247613300032090SoilVGFGLFRALEGGYELWLAGLEFGQRGGGQGRALLASLMSTPPGQKTYVVRVQRGSRYIATVTHLLDTLGFDAVGDTSKVRWFVRRDAPVALSARIRAAVNARRAPNP
Ga0335084_1167583013300033004SoilPGYVFWPDDRHSGMPPVGFGLFRALDQGYELWLAGLEFAKRGGGHGRPLLSALLATPPGQKTYVVRVQRASRYMPQVSHLLETLGFESVGDTARLRWFLRKDAPMALAARIRAGVNARRVLN
Ga0318519_1015330523300033290SoilGKIDTVAVPGYVFWPDDRNSGTPPVGFGLFRAMDGGYELWLAGLEFAKRGGGNGRALLEALFATPPGQRTYVVRIQRASRYVRQVAHLLDTLGFDVIGDTARLRWFVRRDAPPALGARIRGAVNARRTVN
Ga0318519_1106375213300033290SoilRHGGMPPVGFGLFRALEGGYELWLAGLEFGQRGGGQGRALLASLMSTPPGQKTYVVRVQRGSRYIATVTHLLDTLGFDAVGDTSKVRWFVRRDAPVALSARIRAAVNARRAPNP
Ga0316605_1215801313300033408SoilLVTGYFVETDARTGRIDTVAVPGYVFWPDGRNSSSAPAGFGLFRAIEDGGYELWLAGLEFAERGGGLGRALLSSLLATPPGQSTWVVRISRESRYGAAVAHLLDGLGFDVAGDTARLRWFVRRDAPPALAARIRGGTQEPSGRGIN
Ga0316627_10138160723300033482SoilWLAGLEFAERGGGLGRALLSSLLATPPGQSTWVVRISRESRYGAAVAHLLDGLGFDVAGDTARLRWFVRRDAPPALAARIRGGTQEPSGRAIN
Ga0247829_1072890523300033550SoilHGGMPPVGFGLFRALEGGYELWLAGLEFTQRGGGQGRALLASLMSTPPGQKTYVVRVQRGSRYVATVTHLLDTLGFDAVGDTSKLRWFVRRNAPVALSARIRGAVNARRAPST
Ga0247830_1164491213300033551SoilAEFFEKLKRALVTGYFVEQDPRSGRIETVAVPGYVFWPDDRHGGMPPVGFGLFRALEGGYELWLAGLEFTQRGGGQGRALLASLMSTPPGQKTYVVRVQRGSRYVATVTHLLDTLGFDAVGDTSKLRWFVRRNAPVALSARIRGAVNARRAPST

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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