Metagenome Family F060033

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060033
Family Type	Metagenome
Number of Sequences	133
Average Sequence Length	66 residues
Representative Sequence	MIYGYILIMVIMLPSGDIDSRAVDWFEDPYECVEMAQYQHENHESPLGIGFTCIEDVYPPQQGENDG
Number of Associated Samples	91
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	86.47 %
% of genes near scaffold ends (potentially truncated)	21.05 %
% of genes from short scaffolds (< 2000 bps)	93.23 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (49.624 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (44.361 % of family members)
Environment Ontology (ENVO)	Unclassified (76.692 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (91.729 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 14.74% β-sheet: 30.53% Coil/Unstructured: 54.74%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF07681	DoxX	32.33
PF02511	Thy1	16.54
PF10276	zf-CHCC	7.52
PF07835	COX4_pro_2	2.26
PF13759	2OG-FeII_Oxy_5	1.50
PF13640	2OG-FeII_Oxy_3	0.75
PF09834	DUF2061	0.75
PF00127	Copper-bind	0.75
PF12705	PDDEXK_1	0.75
PF00462	Glutaredoxin	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	32.33
COG4270	Uncharacterized membrane protein	Function unknown [S]	32.33
COG1351	Thymidylate synthase ThyX, FAD-dependent family	Nucleotide transport and metabolism [F]	16.54

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.19 %
Unclassified	root	N/A	24.81 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.13 %
Unclassified	root	N/A	24.81 %
Viruses	superkingdom	All Organisms → Viruses	24.06 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.62 %
Unclassified	root	N/A	24.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.06 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.50 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	39.10 %
Unclassified	root	N/A	24.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.06 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	1.50 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	36.09 %
Unclassified	root	N/A	24.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.06 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	1.50 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	36.09 %
Unclassified	root	N/A	24.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.06 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.50 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	36.09 %
Unclassified	root	N/A	24.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.06 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.50 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	36.09 %
Unclassified	root	N/A	24.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.06 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.50 %
Pusillimonas (ex Stolz et al. 2005)	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005)	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	36.09 %
Unclassified	root	N/A	24.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.06 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.50 %
unclassified Pusillimonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	36.09 %
Unclassified	root	N/A	24.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.06 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.50 %
Pusillimonas sp. (ex Stolz et al. 2005)	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas → Pusillimonas sp. (ex Stolz et al. 2005)	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001945\|GOS2241_1040853	All Organisms → Viruses → Predicted Viral	1546	Open in IMG/M
3300001956\|GOS2266_1049906	All Organisms → Viruses → Predicted Viral	1842	Open in IMG/M
3300001960\|GOS2230_1048156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	865	Open in IMG/M
3300001961\|GOS2240_1017254	All Organisms → Viruses → Predicted Viral	1728	Open in IMG/M
3300001962\|GOS2239_1006419	All Organisms → Viruses → Predicted Viral	1451	Open in IMG/M
3300001962\|GOS2239_1047321	All Organisms → Viruses → Predicted Viral	1755	Open in IMG/M
3300001965\|GOS2243_1074255	All Organisms → Viruses → Predicted Viral	1761	Open in IMG/M
3300001973\|GOS2217_10089385	All Organisms → Viruses → Predicted Viral	1730	Open in IMG/M
3300002231\|KVRMV2_101560243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	707	Open in IMG/M
3300005432\|Ga0066845_10141385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	920	Open in IMG/M
3300005606\|Ga0066835_10276819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	578	Open in IMG/M
3300005971\|Ga0066370_10369990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	518	Open in IMG/M
3300006332\|Ga0068500_1274152	All Organisms → Viruses → Predicted Viral	1381	Open in IMG/M
3300006334\|Ga0099675_1084692	All Organisms → Viruses → Predicted Viral	1811	Open in IMG/M
3300006334\|Ga0099675_1089956	Not Available	669	Open in IMG/M
3300006334\|Ga0099675_1628095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	957	Open in IMG/M
3300006565\|Ga0100228_1100392	All Organisms → Viruses → Predicted Viral	1363	Open in IMG/M
3300006565\|Ga0100228_1132367	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300006737\|Ga0098037_1024360	All Organisms → Viruses → Predicted Viral	2249	Open in IMG/M
3300006928\|Ga0098041_1115180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	868	Open in IMG/M
3300007113\|Ga0101666_1057995	All Organisms → cellular organisms → Bacteria → Proteobacteria	716	Open in IMG/M
3300007963\|Ga0110931_1110564	Not Available	828	Open in IMG/M
3300008219\|Ga0114905_1128836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	858	Open in IMG/M
3300008999\|Ga0102816_1193198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	636	Open in IMG/M
3300009481\|Ga0114932_10002720	Not Available	18258	Open in IMG/M
3300009481\|Ga0114932_10097622	All Organisms → Viruses → Predicted Viral	1831	Open in IMG/M
3300009481\|Ga0114932_10125119	All Organisms → Viruses → Predicted Viral	1591	Open in IMG/M
3300009481\|Ga0114932_10396657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	818	Open in IMG/M
3300009481\|Ga0114932_10797761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	547	Open in IMG/M
3300009550\|Ga0115013_10866857	Not Available	630	Open in IMG/M
3300009550\|Ga0115013_11352555	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300009703\|Ga0114933_10010781	All Organisms → cellular organisms → Bacteria → Proteobacteria	7582	Open in IMG/M
3300009703\|Ga0114933_10761960	Not Available	618	Open in IMG/M
3300009790\|Ga0115012_10337917	All Organisms → Viruses → Predicted Viral	1143	Open in IMG/M
3300010153\|Ga0098059_1144079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	939	Open in IMG/M
3300010936\|Ga0137784_1199200	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300012919\|Ga0160422_10093943	Not Available	1765	Open in IMG/M
3300012919\|Ga0160422_10328344	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300012919\|Ga0160422_10420558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	834	Open in IMG/M
3300012919\|Ga0160422_10461840	Not Available	796	Open in IMG/M
3300012920\|Ga0160423_10269235	All Organisms → Viruses → Predicted Viral	1176	Open in IMG/M
3300012920\|Ga0160423_10327750	All Organisms → Viruses → Predicted Viral	1051	Open in IMG/M
3300012920\|Ga0160423_10341804	All Organisms → Viruses → Predicted Viral	1027	Open in IMG/M
3300012920\|Ga0160423_10475800	Not Available	850	Open in IMG/M
3300012920\|Ga0160423_10882760	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	600	Open in IMG/M
3300012920\|Ga0160423_10891102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	597	Open in IMG/M
3300012920\|Ga0160423_10891897	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300012920\|Ga0160423_11098070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	532	Open in IMG/M
3300012928\|Ga0163110_10302638	All Organisms → Viruses → Predicted Viral	1171	Open in IMG/M
3300012928\|Ga0163110_10706546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	786	Open in IMG/M
3300012928\|Ga0163110_11228887	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	603	Open in IMG/M
3300012928\|Ga0163110_11486003	Not Available	549	Open in IMG/M
3300012928\|Ga0163110_11600082	Not Available	530	Open in IMG/M
3300012936\|Ga0163109_10231758	All Organisms → Viruses → Predicted Viral	1354	Open in IMG/M
3300012936\|Ga0163109_10923010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	638	Open in IMG/M
3300012952\|Ga0163180_10442165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	960	Open in IMG/M
3300012953\|Ga0163179_10513061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	993	Open in IMG/M
3300012954\|Ga0163111_11170335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	749	Open in IMG/M
3300013195\|Ga0116815_1027119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	752	Open in IMG/M
3300017709\|Ga0181387_1038304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	946	Open in IMG/M
3300017727\|Ga0181401_1143475	Not Available	585	Open in IMG/M
3300017748\|Ga0181393_1082062	Not Available	844	Open in IMG/M
3300017758\|Ga0181409_1000052	Not Available	38331	Open in IMG/M
3300017764\|Ga0181385_1148367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	713	Open in IMG/M
3300017773\|Ga0181386_1097898	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300017781\|Ga0181423_1356725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	532	Open in IMG/M
3300017786\|Ga0181424_10239919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	760	Open in IMG/M
3300018416\|Ga0181553_10695870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	532	Open in IMG/M
3300020246\|Ga0211707_1013020	All Organisms → Viruses → Predicted Viral	1197	Open in IMG/M
3300020251\|Ga0211700_1004626	All Organisms → Viruses → Predicted Viral	1720	Open in IMG/M
3300020252\|Ga0211696_1024619	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300020257\|Ga0211704_1027539	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300020258\|Ga0211529_1072668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	584	Open in IMG/M
3300020269\|Ga0211484_1050101	Not Available	768	Open in IMG/M
3300020281\|Ga0211483_10021541	All Organisms → Viruses → Predicted Viral	2139	Open in IMG/M
3300020306\|Ga0211616_1063471	Not Available	539	Open in IMG/M
3300020312\|Ga0211542_1048941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	785	Open in IMG/M
3300020360\|Ga0211712_10122273	Not Available	641	Open in IMG/M
3300020370\|Ga0211672_10278970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	516	Open in IMG/M
3300020374\|Ga0211477_10025431	All Organisms → Viruses → Predicted Viral	2569	Open in IMG/M
3300020374\|Ga0211477_10236830	Not Available	629	Open in IMG/M
3300020374\|Ga0211477_10281164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	565	Open in IMG/M
3300020377\|Ga0211647_10046937	All Organisms → Viruses → Predicted Viral	1600	Open in IMG/M
3300020381\|Ga0211476_10173057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	772	Open in IMG/M
3300020388\|Ga0211678_10231789	Not Available	766	Open in IMG/M
3300020388\|Ga0211678_10260154	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300020392\|Ga0211666_10057193	All Organisms → Viruses → Predicted Viral	1650	Open in IMG/M
3300020392\|Ga0211666_10306870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	594	Open in IMG/M
3300020392\|Ga0211666_10339155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	558	Open in IMG/M
3300020393\|Ga0211618_10138335	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300020393\|Ga0211618_10221379	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300020397\|Ga0211583_10220251	Not Available	690	Open in IMG/M
3300020400\|Ga0211636_10097289	All Organisms → Viruses → Predicted Viral	1194	Open in IMG/M
3300020400\|Ga0211636_10318884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	590	Open in IMG/M
3300020403\|Ga0211532_10207072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	780	Open in IMG/M
3300020409\|Ga0211472_10107558	All Organisms → Viruses → Predicted Viral	1103	Open in IMG/M
3300020413\|Ga0211516_10488219	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300020414\|Ga0211523_10249607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	731	Open in IMG/M
3300020418\|Ga0211557_10236525	All Organisms → cellular organisms → Bacteria → Proteobacteria	842	Open in IMG/M
3300020420\|Ga0211580_10034688	All Organisms → Viruses → Predicted Viral	2178	Open in IMG/M
3300020422\|Ga0211702_10101117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	818	Open in IMG/M
3300020424\|Ga0211620_10497374	Not Available	512	Open in IMG/M
3300020429\|Ga0211581_10347920	Not Available	605	Open in IMG/M
3300020430\|Ga0211622_10100430	All Organisms → Viruses → Predicted Viral	1252	Open in IMG/M
3300020430\|Ga0211622_10454071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	549	Open in IMG/M
3300020430\|Ga0211622_10493041	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300020436\|Ga0211708_10209371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	784	Open in IMG/M
3300020437\|Ga0211539_10304229	Not Available	661	Open in IMG/M
3300020441\|Ga0211695_10294659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	595	Open in IMG/M
3300020445\|Ga0211564_10331319	Not Available	749	Open in IMG/M
3300020457\|Ga0211643_10109550	All Organisms → Viruses → Predicted Viral	1362	Open in IMG/M
3300020463\|Ga0211676_10384317	Not Available	773	Open in IMG/M
3300020465\|Ga0211640_10385145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	772	Open in IMG/M
3300020465\|Ga0211640_10497036	Not Available	665	Open in IMG/M
3300020469\|Ga0211577_10448355	Not Available	790	Open in IMG/M
3300020470\|Ga0211543_10233479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	904	Open in IMG/M
3300020470\|Ga0211543_10301169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	779	Open in IMG/M
3300020470\|Ga0211543_10349281	Not Available	714	Open in IMG/M
3300020471\|Ga0211614_10048089	Not Available	1779	Open in IMG/M
3300022074\|Ga0224906_1000237	Not Available	32293	Open in IMG/M
3300022074\|Ga0224906_1163734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	622	Open in IMG/M
3300024344\|Ga0209992_10217057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	806	Open in IMG/M
3300027859\|Ga0209503_10062042	All Organisms → Viruses → Predicted Viral	1718	Open in IMG/M
3300027859\|Ga0209503_10321224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	756	Open in IMG/M
3300029318\|Ga0185543_1045922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	943	Open in IMG/M
3300029319\|Ga0183748_1022718	All Organisms → Viruses → Predicted Viral	2182	Open in IMG/M
3300029319\|Ga0183748_1039412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas → Pusillimonas sp. (ex Stolz et al. 2005)	1437	Open in IMG/M
3300029319\|Ga0183748_1079882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	810	Open in IMG/M
3300029319\|Ga0183748_1113691	Not Available	598	Open in IMG/M
3300029448\|Ga0183755_1081463	Not Available	690	Open in IMG/M
3300029792\|Ga0183826_1029111	Not Available	875	Open in IMG/M
3300032006\|Ga0310344_10963867	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300032820\|Ga0310342_102565236	Not Available	610	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified	44.36%
Oceanic	Environmental → Aquatic → Marine → Oceanic	36.09%
Strait	Environmental → Aquatic → Marine → Strait	7.52%
Volcanic	Environmental → Aquatic → Marine → Volcanic	6.77%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	4.51%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	44.36%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	20.30%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	15.79%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	7.52%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	6.77%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	3.01%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.75%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.75%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	0.75%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	44.36%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	12.03%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	12.03%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	7.52%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	6.02%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	4.51%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	3.01%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	3.01%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.50%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.50%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	0.75%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	0.75%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.75%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.75%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	0.75%
Volcanic Co2 Seep Seawater	Environmental → Aquatic → Marine → Volcanic → Unclassified → Volcanic Co2 Seep Seawater	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001945	Marine microbial communities from Galapagos, Equador - GS026	Environmental	Open in IMG/M
3300001956	Marine microbial communities from Rangirora Atoll, Polynesia Archipelagos - GS051	Environmental	Open in IMG/M
3300001960	Marine microbial communities from South of Charleston, South Carolina, USA - GS014	Environmental	Open in IMG/M
3300001961	Marine microbial communities from Dirty Rock, Cocos Island, Costa Rica - GS025	Environmental	Open in IMG/M
3300001962	Marine microbial communities from Cocos Island, Costa Rica - GS023	Environmental	Open in IMG/M
3300001965	Marine microbial communities from Coastal Floreana, Equador - GS028	Environmental	Open in IMG/M
3300001973	Marine microbial communities from Bermuda, Atlantic Ocean - GS001	Environmental	Open in IMG/M
3300002231	Marine sediment microbial communities from Santorini caldera mats, Greece - red mat	Environmental	Open in IMG/M
3300005432	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV78	Environmental	Open in IMG/M
3300005606	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV84	Environmental	Open in IMG/M
3300005971	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_SurfaceA_ad_5m_LV_A	Environmental	Open in IMG/M
3300006332	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0200m	Environmental	Open in IMG/M
3300006334	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0025m	Environmental	Open in IMG/M
3300006565	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_2_0125m	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006928	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG	Environmental	Open in IMG/M
3300007113	Seawater microbiome, Papua New Guinea CO2 seep, Upa-Upasina 'bubble' site, Water-is	Environmental	Open in IMG/M
3300007963	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)	Environmental	Open in IMG/M
3300008219	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05	Environmental	Open in IMG/M
3300008999	Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.545	Environmental	Open in IMG/M
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental	Open in IMG/M
3300009550	Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome	Environmental	Open in IMG/M
3300009703	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaG	Environmental	Open in IMG/M
3300009790	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300010936	Marine microbial communities from surface seawater of North Pacific Subtropical Gyre ? Stn. ALOHA, 15m	Environmental	Open in IMG/M
3300012919	Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaG	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300012928	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaG	Environmental	Open in IMG/M
3300012936	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaG	Environmental	Open in IMG/M
3300012952	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 Metagenome	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300013195	Marine hypoxic microbial communities from the Gulf of Mexico, USA - 10m_Station7_GOM_Metagenome	Environmental	Open in IMG/M
3300017709	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27	Environmental	Open in IMG/M
3300017727	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20	Environmental	Open in IMG/M
3300017748	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21	Environmental	Open in IMG/M
3300017758	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300017773	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24	Environmental	Open in IMG/M
3300017781	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14	Environmental	Open in IMG/M
3300017786	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18	Environmental	Open in IMG/M
3300018416	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020246	Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX555934-ERR599105)	Environmental	Open in IMG/M
3300020251	Marine microbial communities from Tara Oceans - TARA_B100000519 (ERX555940-ERR599040)	Environmental	Open in IMG/M
3300020252	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_078 - TARA_B100000524 (ERX555968-ERR599022)	Environmental	Open in IMG/M
3300020257	Marine microbial communities from Tara Oceans - TARA_B100000508 (ERX555911-ERR599048)	Environmental	Open in IMG/M
3300020258	Marine microbial communities from Tara Oceans - TARA_B100000073 (ERX556061-ERR598949)	Environmental	Open in IMG/M
3300020269	Marine microbial communities from Tara Oceans - TARA_A100001035 (ERX556080-ERR599041)	Environmental	Open in IMG/M
3300020281	Marine microbial communities from Tara Oceans - TARA_A100001035 (ERX556022-ERR599116)	Environmental	Open in IMG/M
3300020306	Marine microbial communities from Tara Oceans - TARA_B100000212 (ERX556014-ERR599098)	Environmental	Open in IMG/M
3300020312	Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX556125-ERR598977)	Environmental	Open in IMG/M
3300020360	Marine microbial communities from Tara Oceans - TARA_B100000459 (ERX555918-ERR599165)	Environmental	Open in IMG/M
3300020370	Marine microbial communities from Tara Oceans - TARA_B100001029 (ERX556065-ERR599079)	Environmental	Open in IMG/M
3300020374	Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291766-ERR318618)	Environmental	Open in IMG/M
3300020377	Marine microbial communities from Tara Oceans - TARA_B100000927 (ERX556007-ERR599065)	Environmental	Open in IMG/M
3300020381	Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291769-ERR318620)	Environmental	Open in IMG/M
3300020388	Marine microbial communities from Tara Oceans - TARA_B100001063 (ERX555965-ERR599064)	Environmental	Open in IMG/M
3300020392	Marine microbial communities from Tara Oceans - TARA_B100000963 (ERX555916-ERR599163)	Environmental	Open in IMG/M
3300020393	Marine microbial communities from Tara Oceans - TARA_B100000161 (ERX556105-ERR599054)	Environmental	Open in IMG/M
3300020397	Marine microbial communities from Tara Oceans - TARA_B100000123 (ERX556052-ERR599075)	Environmental	Open in IMG/M
3300020400	Marine microbial communities from Tara Oceans - TARA_B100001115 (ERX555947-ERR598992)	Environmental	Open in IMG/M
3300020403	Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145)	Environmental	Open in IMG/M
3300020409	Marine microbial communities from Tara Oceans - TARA_A100001403 (ERX555912-ERR599106)	Environmental	Open in IMG/M
3300020413	Marine microbial communities from Tara Oceans - TARA_S200000501 (ERX555962-ERR599092)	Environmental	Open in IMG/M
3300020414	Marine microbial communities from Tara Oceans - TARA_B100000035 (ERX556019-ERR599028)	Environmental	Open in IMG/M
3300020418	Marine microbial communities from Tara Oceans - TARA_B100002051 (ERX556028-ERR599136)	Environmental	Open in IMG/M
3300020420	Marine microbial communities from Tara Oceans - TARA_B100001248 (ERX556094-ERR599142)	Environmental	Open in IMG/M
3300020422	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_076 - TARA_B100000513 (ERX555999-ERR599126)	Environmental	Open in IMG/M
3300020424	Marine microbial communities from Tara Oceans - TARA_B100000242 (ERX556056-ERR599138)	Environmental	Open in IMG/M
3300020429	Marine microbial communities from Tara Oceans - TARA_B100000614 (ERX556134-ERR599032)	Environmental	Open in IMG/M
3300020430	Marine microbial communities from Tara Oceans - TARA_B100000683 (ERX556126-ERR599160)	Environmental	Open in IMG/M
3300020436	Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984)	Environmental	Open in IMG/M
3300020437	Marine microbial communities from Tara Oceans - TARA_B100000282 (ERX555906-ERR599074)	Environmental	Open in IMG/M
3300020441	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_078 - TARA_B100000524 (ERX556088-ERR599006)	Environmental	Open in IMG/M
3300020445	Marine microbial communities from Tara Oceans - TARA_B100001996 (ERX555961-ERR599087)	Environmental	Open in IMG/M
3300020457	Marine microbial communities from Tara Oceans - TARA_B100001113 (ERX555941-ERR599014)	Environmental	Open in IMG/M
3300020463	Marine microbial communities from Tara Oceans - TARA_B100001057 (ERX555988-ERR599050)	Environmental	Open in IMG/M
3300020465	Marine microbial communities from Tara Oceans - TARA_B100000579 (ERX556060-ERR598961)	Environmental	Open in IMG/M
3300020469	Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)	Environmental	Open in IMG/M
3300020470	Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)	Environmental	Open in IMG/M
3300020471	Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX556063-ERR599002)	Environmental	Open in IMG/M
3300022074	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)	Environmental	Open in IMG/M
3300024344	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)	Environmental	Open in IMG/M
3300027859	Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome (SPAdes)	Environmental	Open in IMG/M
3300029318	Marine giant viral communities collected during Tara Oceans survey from station TARA_038 - TARA_Y100000289	Environmental	Open in IMG/M
3300029319	Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516	Environmental	Open in IMG/M
3300029448	Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082	Environmental	Open in IMG/M
3300029792	Marine giant viral communities collected during Tara Oceans survey from station TARA_041 - TARA_Y100000052	Environmental	Open in IMG/M
3300032006	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MG	Environmental	Open in IMG/M
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GOS2241_10408533	3300001945	Marine	MIYGYILVMVIMLPSGDIDSRAVDWFEDPYECVEVAQYQHENHESPLGIGFTCIEDVYPPQQEEKENG*
GOS2266_10499063	3300001956	Marine	MIYGYILVMVIMLPSGDIDSRAVDWFEDPYECVEMAQYQHENNPSPLGIGFTCIEDVYPPQQGEKDDG*
GOS2230_10481563	3300001960	Marine	MIYGYYLIMVMMLPSGDVHSEALDWYFTPYECIEEAQYQHENKSQLGIGYVCIEDVYPVKERDLDE*
GOS2240_10172543	3300001961	Marine	MIYGYYLIMVIMLPSGDIDSRAVDWFEDPYECVEMAQYQHENVESPLGIGFTCIEDVYPVKERDLDE*
GOS2239_10064195	3300001962	Marine	MIYGYILIMVIMLPTGDIDSRAVDWFEDPYECVEMAQYQHENHESPLGIGFTCIEDVYPPQQGENDG*
GOS2239_10473217	3300001962	Marine	MIYGYILIMVIMLPSGDIDSRAVDWFEDPYECVEMAQYQHENHESPLGIGFTCVEDVYPPQQREKNDG*
GOS2243_10742552	3300001965	Marine	MIYGYILIMVIMLPSGDIDSRAVDWFEDPTSCVEMAMHQHENHESPLGIGFTCIEDVYPPQQGENDG*
GOS2217_100893856	3300001973	Marine	MIYGYILIMVIMLPSGDIDSRAVDWFEDPYECVEMAQYQHENVESPLGIGFTCIEDVYPVKERDLDE*
KVRMV2_1015602431	3300002231	Marine Sediment	MIYGYYLIMVMMLPTGDVHGEALDWYFTPYECYEQALYQHENKSQLGVGFVCIEDVIPAKEKNDG*
Ga0066845_101413853	3300005432	Marine	MIYGYILIMVIMLPSGDIDSRAVDWFEDPYECVEMAQYQHENHESPLGIGFTCIEDVYPVKE
Ga0066835_102768192	3300005606	Marine	MIYGYILIMVIMLPSGDIDSRAVDWFEDPYECVEMAQYQHENHESPLGIGFTCIEDVYPVKERDLDE*
Ga0066370_103699902	3300005971	Marine	MIYGYILIMVIMLPSGDIDSRAVDWFEDPYECVEMAQYQHENHESPLGIGFTCIEDVYPPQQGEKENG*
Ga0068500_12741525	3300006332	Marine	MNTTIYGFYLIMVVMLPSGDIKSEAVDWYFTPYECVEMAQYHHENHETPLGVGFTCIEDVIPAKEKNDG*
Ga0099675_10846921	3300006334	Marine	MTTIYGYILIMVTMLPSGDIESTAIDWYFTPYECVEMAHYHHENHESPLGVGFTCIEDV
Ga0099675_10899561	3300006334	Marine	MIYGYILIMVIMLPTGDIDSRAVDWFEDPYECVEMAQYQHENHESPLGIGFTCIEDVYPVKERDLDE*
Ga0099675_16280952	3300006334	Marine	MIYGYILIMVIMLPSGDIDSRAVDWFEDPYECVEMAQYQHENHESPLGIGFTCIEDVYPVTERDLDE*
Ga0100228_11003923	3300006565	Marine	MNTTIYGFYLIMVVMLPSGDIKSEAVDWYFTPYECVEMAQYHHENHETPIGVGFTCIEDILPPEENS*
Ga0100228_11323672	3300006565	Marine	MNTTIYGFYLIMVVMLPSGDIKSEAVDWYFTPYECIEAAQYHHENHETPIGVGFTCIEDILPPEENS*
Ga0098037_10243604	3300006737	Marine	MIYGYILVMVIMLPSGDIDSRAVDWFEDPYECIEVAQYQHENNPSPLGIGFTCIEDLYPPHTKGENDG*
Ga0098041_11151804	3300006928	Marine	MNTVYGFYLIMVVMLPSGDIKGEAVDWFFTPYECIEAAQYHHENHDTPLGVGFTCIEDILPPDAEEKS*
Ga0101666_10579952	3300007113	Volcanic Co2 Seep Seawater	MIYGYYLIMVMMLPTGDVHGETLDWYFTPYECIEEAQYQHENKSQLGVGYVCIEDILPSEEKSNE*
Ga0110931_11105642	3300007963	Marine	MIYGYILVMVIMLPSGDIDSRAVDWFEDPYECVEVAQYQHENNSSPLGVGFTCIEDLYPPHTKGENDG*
Ga0114905_11288362	3300008219	Deep Ocean	MNTVYGFYLIMVVMLPSGDIKGEAVDWFFTPYECIEAAQFHHENHDTPLGVGFTCIEDILPPEEKDNG*
Ga0102816_11931982	3300008999	Estuarine	MNTVYGFYLIMVVMLPSGDIKGEAVDWFFTPYECVEAAQFNHENHDTPLGVGFTCIEDVLPLEEKDNG*
Ga0114932_1000272035	3300009481	Deep Subsurface	MIYGYYLIMVMMLPTGDVHGEVLDWYFTPHECIEEAQYYHENKSHLGVGYVCIEDVYPVKERDLDE*
Ga0114932_100976222	3300009481	Deep Subsurface	MIYGYYLIMVMMLPTGDVHGEAVDWYFTPYECYEQALYQHENKSQLGVGFVCIEDVIPAKEKNDG*
Ga0114932_101251194	3300009481	Deep Subsurface	MNTTIYGFYLIMVMMLPSGDVHGEALDWYFTPYECYEQAQYQHENKSQLGVGFVCIEDVLPPEEKS*
Ga0114932_103966572	3300009481	Deep Subsurface	MIYGYILIMVIMLPSGDIDSRAVDWFEDAYECVEMAQYQHENVESPLGIGFTCIEDIYPPHTKGENDG*
Ga0114932_107977612	3300009481	Deep Subsurface	MNTTIYGFYLIMVVMLPSGDIKSEAVDWYFTPYECIEAAQYHHENHETPIGVGFTCIEDILPPDAEEKS*
Ga0115013_108668574	3300009550	Marine	MVIMLPSGDIDSRAVDWFEDPYECVEMAQYQHENHESPLGIGFTCIEDVYPPQQGENDG*
Ga0115013_113525552	3300009550	Marine	MNTVYGFYLIMVVMLPSGDIKGEAVDWFFTPYECIEAAQFHHENHDTPLGVGFTCIEDILPPDAEEKS*
Ga0114933_1001078123	3300009703	Deep Subsurface	MIYGYYLIMVMMLPTGDVHGEVLDWYFTPHECIEEAQYHHENKSHLGVGYVCIEDVYPVKERDLDE*
Ga0114933_107619602	3300009703	Deep Subsurface	MNTTIYGFYLIMVVMLPSGDIKSEAVDWFFTPYECIEAAQYHHENHDTPLGVGFTCIEDILPPEEKDNG*
Ga0115012_103379172	3300009790	Marine	MTTIYGYILIMVTMLPSGDIESTAIDWYFTPYECVEMAHYHHENHESPLGVGFTCIEDVYPVKERDLDE*
Ga0098059_11440791	3300010153	Marine	MIYGYILVMVIMLPSGDIDSRAVDWFEDPYECVEVAQYQHENNPSPLGVGFTCIEDLYPPHTKGENDE*
Ga0137784_11992002	3300010936	Marine	MIYGYILIMVIMLPSGDIDSRAVDWFEDPYECVEMAQYQHENHESPLGIGFTCIEDVYPPQQGENDG*
Ga0160422_100939431	3300012919	Seawater	RMNVYGYILIMVTMLPSGDIESEALDWFSNPYECVEIARFHHENHESPYGVGFTCIEDVYQIIEKDLN*
Ga0160422_103283443	3300012919	Seawater	MTTIYGYILIMVTMLPSGDIESTAIDWYFTPYECVEMAHYHHENHESPLGVGFTCIEDVYPVKEKDLDE*
Ga0160422_104205583	3300012919	Seawater	MIYGYILVMVIMLPSGDIDSRAVDWFEDPYECVEVAQYQHENHESPLGIGFTCIEDVYPPQQGEKENG*
Ga0160422_104618401	3300012919	Seawater	SRKMIYGYILIMVIMLPSGDIDSRAVDWFEDPYECVEMAQYQHENHESPLGIGFTCIEDVYPVKERDLDE*
Ga0160423_102692351	3300012920	Surface Seawater	GYYLIMVVMLPTGDIDSRAVDWFEDPYECVEMAQYQHENHESPLGIGFTCIEDVYPPQQGENDG*
Ga0160423_103277502	3300012920	Surface Seawater	MVIMLPSGDIDSRAVDWFEDPYECVEMAQYQHENHESPLGIGFTCVEDVYPPQQEEKSNE
Ga0160423_103418043	3300012920	Surface Seawater	MIYGYILIMVTMLPSGDIESEALDWFNNPYECVEVAHYHHENHESPYGVGFTCIEDVYQVLEKDLDE*
Ga0160423_104758001	3300012920	Surface Seawater	MLPSGDIDSRAVDWFEDPYECVEMAQYQHENHESPLGIGFTCIEDVYPVKERDLDE*
Ga0160423_108827602	3300012920	Surface Seawater	GRWTYICTKGESFNMIYGYILIMVTMLPSGDIQSVALDWFNDPYECVEVAHYHHENHESPLGVGFTCIEDVYQVKEKDLDE*
Ga0160423_108911022	3300012920	Surface Seawater	MIYGYILVMVIMLPSGDIDSRAVDWFEDPYECVEVAQYEHENNPSPLGIGFTCIEDVYPPQQREKEDG*
Ga0160423_108918972	3300012920	Surface Seawater	MIYGYILIMVTLLPSGDIQSVALDWFNDPYECVEVAHYHHENHESPFGVGFTCIEDVYQVKEKDLDE*
Ga0160423_110980702	3300012920	Surface Seawater	MIYGYILVMVIMLPSGDIDSRAVDWFEDPYECVEMAQYQHENHESPLGIGFTCIEDVYPPQQGEKDDG*
Ga0163110_103026382	3300012928	Surface Seawater	MIYGYILIMVIMLPTGDIDSRAVDWFEDPYECVEMAQYQHENHESPLGIGFTCIEDVYPPQQGEKDDG*
Ga0163110_107065462	3300012928	Surface Seawater	MIYGYILIMVIMLPSGDIDSRAVDWFEDPYECVEMAQYQHENHESPLGIGFTCIEDVYPPQQQEKENG*
Ga0163110_112288871	3300012928	Surface Seawater	TMLPSGDIQSVALDWFNDPYACVEVAHYHHENHESPMGVGFTCIEDVYQVLEKDLDE*
Ga0163110_114860031	3300012928	Surface Seawater	KMIYGYILIMVIMLPSGDIDSRAVDWFEDPYECVEMAQYQHENVESPLGIGFTCIEDVYPVKERDLDE*
Ga0163110_116000823	3300012928	Surface Seawater	LPTGDIDSRAVDWFEDPYECVEMAQYQHENHESPLGIGFTCIEDVYPPQQGENDG*
Ga0163109_102317584	3300012936	Surface Seawater	MIYGYILIMVTMLPSGDIQSVALDWFNDPYECVEVAHYHHENHESPFGVGFTCIEDVYQVIEKDLDE*
Ga0163109_109230102	3300012936	Surface Seawater	MIYGYILVMVIMLPSGDIDSRAVDWFEDPYECVEVAQYQHENHESPLGIGFTCIEDVYPPQQGEKNDG*
Ga0163180_104421653	3300012952	Seawater	MNTTIYGFYLIMVVMLPSGDIKSEAVDWYFTPYECIEAAQFHHENHETPLGVGFTCIEDILPPDAEEKS*
Ga0163179_105130613	3300012953	Seawater	MNTTIYGFYLIMVVMLPSGDIKGEAVDWYFTPYECIEAAQFHHENHETPLGVGFTCIEDVLPPEENS*
Ga0163111_111703352	3300012954	Surface Seawater	MNTVFGYILIMVTMLPSGDIQSVALDWFNDPYECVEIAHYHHENHESPMGVGFTCIEDVYQIIEKDLDE*
Ga0116815_10271191	3300013195	Marine	MIYGYYLIMVMMLPTGDVHGETLDWYFTPYECIEEAQYQHENKSQLGVGYVCIEDVLP
Ga0181387_10383043	3300017709	Seawater	MNTVYGFYLIMVVMLPSGDIKGEAVDWFFTPYECVEAAQFNHENHDTPLGVGFTCIEDVLPPEEKDNG
Ga0181401_11434753	3300017727	Seawater	MNTVYGFYLIMVVMLPSGDIKGEAVDWFFTPYECVEAAQFHHENHDTPLGVGFTCIEDILPPEEKDNG
Ga0181393_10820622	3300017748	Seawater	MVIMLPSGDIDSRAVDWFEDPYECIEVAQYQHENNPSPLGIGFTCIEDLYPPHTKGENDG
Ga0181409_100005217	3300017758	Seawater	MNTVYGFYLIMVVMLPPGDIKGEAVDWFFTPYECVEAAQFNHENHDTPLGVGFTCIEDVLPLEEKDNG
Ga0181385_11483671	3300017764	Seawater	MIYGYILIMIIMLPSGDIDSRAVDWFEDAYECVEMAQYQHENVESPLGIGFTCIEDIYPPHTKGENDG
Ga0181386_10978982	3300017773	Seawater	MNTTIYGFYLIMVVMLPSGDVKGEAVDWFFTPYECIEAAQFHHENHETPLGVGFTCIEDVLPPEENS
Ga0181423_13567251	3300017781	Seawater	MNTTIYGFYLIMVVMLPSGDIKGEAVDWYFTPYECIEAAQFHHENHETPLGVGFTCIEDLYPPHTKGENDG
Ga0181424_102399193	3300017786	Seawater	MNTTIYGFYLIMVVMLPSGDIKGEAVDWYFTPYECIEAAQYHHENHETPIGVGFTCIEDILPPE
Ga0181553_106958701	3300018416	Salt Marsh	MRYGYYLIMVMMLPTGDVHGETLDWYFTPYECIEEAQNQHENKSQLGVGYVCIED
Ga0211707_10130202	3300020246	Marine	MIYGYILIMVIMLPSGDIDSRAVDWFEDPYECVEMAQYQHENHESPLGIGFTCIEDVYPVKERDLDE
Ga0211700_10046263	3300020251	Marine	MNTTIYGFYLIMVVMLPSGDIKSEAVDWYFTPYECVEMAQYHHENHETPLGVGFTCIEDVIPAKEKQDG
Ga0211696_10246192	3300020252	Marine	MNTTIYGFYLIMVVMLPSGDIKSEAVDWYFTPYECVEAAQYHHENHETPIGVGFTCIEDILPPEENS
Ga0211704_10275392	3300020257	Marine	MIYGYILIMVIMLPSGDIDSRAVDWFEDPYECVEMAQYQHENHESPLGIGFTCIEDVYPSQQGENDG
Ga0211529_10726683	3300020258	Marine	MIYGYILIMVIMLPTGDIDSRAVDWFEDPYECVEMAQYQHENHESPLGIGFTCIEDVYPVKERDLDE
Ga0211484_10501014	3300020269	Marine	MVMMLPTGDVHSETLDWYFTPYECIEDAQYHHENESQLGVGYVCIEDVLPPEEKDNG
Ga0211483_100215412	3300020281	Marine	MIYGYYLIMVMMLPTGDVHSETLDWYFTPYECIEDAQYHHENESQLGVGYVCIEDVLPPEEKDNG
Ga0211616_10634713	3300020306	Marine	MNVYGYILIMVTMLPSGDIESEALDWFSNPYECVEIAHFHHENHDSPYGVGFTCIEDVYQIIEKDLD
Ga0211542_10489412	3300020312	Marine	MIYGYYLIMVMMLPTGDVHGEALDWYFTPYECIEEAQYQHENKSQLGVGYVCIEDVLPPEEKNDG
Ga0211712_101222731	3300020360	Marine	MIYGYILIMVIMLPTGDIDSRAVDWFEDPYECVEMAQYQHENHESPLGIGFTCIEDVYPPQQGENDG
Ga0211672_102789702	3300020370	Marine	MNTTIYGFYLIMVVMLPSGDVKSEAVDWYFTPYECVEAAQYHHENHETPIGVGFTCIEDILPPEENS
Ga0211477_100254317	3300020374	Marine	MNTTIYGFYLIMVMMLPSGDVHGEALDWYFTPYECYEQAQYQHENKSQLGVGFVCIEDVLPPEEKS
Ga0211477_102368302	3300020374	Marine	MIYGYYLIMVMMLPTGDVHGEAIDWYFTPYECYEQALYQHENKSQLGVGFVCIEDILPPEEKNNG
Ga0211477_102811643	3300020374	Marine	MIYGYILIMVIMLPSGDIDSRAVDWFEDAYECVEMAQYQHENVESPLGIGFTCIEDIYPPHTKGENDG
Ga0211647_100469374	3300020377	Marine	MNTVFGYILIMVTMLPSGDIQSVALDWFNDPYECVEIAHYHHENHESPMGVGFTCIEDVYQIIEKDLDE
Ga0211476_101730572	3300020381	Marine	MIYGYYLIMVMMLPTGDVHGEVLDWYFTPHECIEEAQYHHENKSHLGVGYVCIEDVYPVKERDLDE
Ga0211678_102317891	3300020388	Marine	VSLGRWVTICTKGESFNMIYGYILIMVTLLPSGEIESVALDSFTNPYECVEVAHYHHENHESPLGVGFTCIEDVYQVIEKDLDE
Ga0211678_102601543	3300020388	Marine	MIYGYILVMVIMLPSGDIDSRAVDWFEDPYECVEVAQYQHENNPSPLGVGFTCIEDLYPPHTKGENDG
Ga0211666_100571934	3300020392	Marine	MNTVFGYILIMVTMLPSGEIESEALDWFTNPYECVEIAHYHHENHDSPYGVGFTCIEDVYQIIEKDLDE
Ga0211666_103068703	3300020392	Marine	MIYGYILVMVIMLPSGDIDSRAVDWFEDPYECVEMAQYQHENNPSPLGIGFTCIEDLYPPQQGENDG
Ga0211666_103391551	3300020392	Marine	MIYGYILIMVIMLPTGDIDSRAVDWFEDPYECVEMAQYQHENHESPLGIGFTCIEDV
Ga0211618_101383352	3300020393	Marine	MTTIYGYILIMVTMLPSGDIESTAIDWYFTPYECVEMAHYHHENHESPLGVGFTCIEDVYPVKERDLDE
Ga0211618_102213793	3300020393	Marine	MLPSGDIESEALDWFSNPYECVEIAHFHHENHDSPYGVGFTCIEDVYQIIEKDLD
Ga0211583_102202512	3300020397	Marine	MVTMLPSGDIESEALDWFSNPYECVEIAHFHHENHDSPYGVGFTCIEDVYQIIEKDLD
Ga0211636_100972892	3300020400	Marine	MLPSGDIESEALDWFTNPYECVEIAHYHHENHDSPYGVGFTCIEDVYQIIEKDLDE
Ga0211636_103188843	3300020400	Marine	MIYGYILVMVIMLPSGDIDSRAVDWFEDPYECVEVAQYQHENHESPLGIGFTCIEDVYPPQQEEKENG
Ga0211532_102070722	3300020403	Marine	MNTVYGFYLIMVVMLPSGDINSEAVDWFFTPYECIEAAQYHHENHETPLGVGFTCIEDILPPDAEEKDDG
Ga0211472_101075583	3300020409	Marine	MIYGYYLIMVMILPTGDVHGEALDWYFTPYECIEQAQYHHENKSKLGIGYVCIEDVLPPEEKDNG
Ga0211516_104882192	3300020413	Marine	MNTTIYGFYLIMVVMLPSGDIKGEAVDWYFTPYECIEAAQFHHENHETPLGVGFTCIEDILPPDAEEKS
Ga0211523_102496071	3300020414	Marine	MIYGYILIMVIMLPSGDIDSRAVDWFEDPYECVEMAQYQHENHESPLGIGFTCIEDVYPSQQGEND
Ga0211557_102365252	3300020418	Marine	MIYGYYLIMVMMLPTGDVHGEALDWYFTPYECIEQAQYHHENKSKLGVGYVCIEDVLPPEGKNDG
Ga0211580_100346887	3300020420	Marine	MMTTIYGYILIMVTMLPSGDIESTAIDWYFTPYECVEMAHYHHENHESPLGVGFTCIEDIYPVKERDLDE
Ga0211702_101011171	3300020422	Marine	MTYGYILIMVIMLPSGDIDSRAVDWFEDPYECVEMAQYQHENHESPLGIGFTCIEDVYPVKERDLDE
Ga0211620_104973743	3300020424	Marine	MTTIYGYILIMVTMLPSGDIESTAIDWYFTPYECVEMAHYHHENHESPLGVGFTCIEDVYPVKEKDLDG
Ga0211581_103479201	3300020429	Marine	LIMVIMLPTGDIDSRAVDWFEDPYECVEMAQYQHENHESPLGIGFTCIEDVYPSQQGEK
Ga0211622_101004303	3300020430	Marine	MIYGYYLIMVVMLPTGDIDSRAVDWFEDPYECVEMAQYQHENHESPLGIGFTCIEDVYPSQQGEK
Ga0211622_104540713	3300020430	Marine	MIYGYILVMVIMLPSGDIDSRAVDWFEDPYECVEVAQYQHENHESPLGIGFTCIEDVYPPQQEEKEDG
Ga0211622_104930412	3300020430	Marine	MNTVFGYILIMVTMLPSGDIESEALDWFTNPYECVEIAHYHHENHDSPYGVGFTCIEDVYQIIEKDLDE
Ga0211708_102093712	3300020436	Marine	MIYGYILIMVIMLPTGDIDSRAVDWFEDPYECVEMAQYQHENNPSPLGIGFTCIEDVYPVKERDLDE
Ga0211539_103042291	3300020437	Marine	GDIDSRAVDWFEDPYECVEMAQYQHENHESPLGIGFTCIEDVYPPQQGEKNDG
Ga0211695_102946591	3300020441	Marine	MTYGYILIMVIMLPSGDIDSRAVDWFEDPYECVEMAQYQHENHESPLGIGFTCIEDVYPPQQGENDG
Ga0211564_103313191	3300020445	Marine	MIYGYYLIMVVMLSSGDIKSEAVDWYFTPYECIESAQYHHENHETPLGVGFTCIEDVLPPDAEKKS
Ga0211643_101095504	3300020457	Marine	MNTVFGYILIMVTMLPSGDIQSVALDWFNDPYECVEIAHYHHENHESPMGVGFTCIEDVY
Ga0211676_103843171	3300020463	Marine	VMVIMLPSGDIDSRAVDWFEDPYECVEMAQYQHENNPSPLGIGFTCIEDLYPPHTKGEND
Ga0211640_103851452	3300020465	Marine	MIYGYILIMVIMLPNGDIDSRAVDWFEDPTSCVEMAMHQHENHESPLGIGFTCIEDLYPPQQGENDG
Ga0211640_104970361	3300020465	Marine	MNTTIYGFYLIMVVMLPSGDIKSEAVDWYFTPYECIEAAQYHHENHETPIGVGFTCIEDILPPEENS
Ga0211577_104483554	3300020469	Marine	MNTVYGFYLIMVVMLPSGDIKGEAVDWFFTPYECVEAAQFNHENHDTPLGVGFTCIEDVLPLEEKDNG
Ga0211543_102334792	3300020470	Marine	MIYGYYLIMVMMLPTGDVHGEALDWYFTPYECIEEAQHQHENKSQLGVGYVCIEDVLPPEEKSDE
Ga0211543_103011692	3300020470	Marine	MIYGYYLIMVMMLPSGDVHGEVLDWYFTPYECIEEAQYQHENKSQLGVGYVCIEDVYPVKERDLDE
Ga0211543_103492813	3300020470	Marine	MMLPTGDVHGEALDWYFTPYECIEEAQHQHENKSQLGVGYVCIEDVLPPEEKNDG
Ga0211614_100480897	3300020471	Marine	VTMLPSGDIESEALDWFSNPYECVEIAHFHHENHESPYGVGFTCIEDVYQIIEKDLD
Ga0224906_100023765	3300022074	Seawater	MIYGYILIMVTMLPSGDIESTALDWFNDPYECVEVAHYHHENHESPLGVGFTCIEDVYQIIEKDLDE
Ga0224906_11637342	3300022074	Seawater	MIYGYILIMVIMLPNGDIDSRAVDWFEDPTSCVEMAMHQHENHESPLGVGFTCIEDLYPPHTKGENDG
Ga0209992_102170572	3300024344	Deep Subsurface	MIYGYYLIMVMMLPTGDVHGEAVDWYFTPYECYEQALYQHENKSQLGVGFVCIEDVIPAKEKNDG
Ga0209503_100620426	3300027859	Marine	MNTVYGFYLIMVVMLPSGDIKGEAVDWFFTPYECIEAAQFHHENHDTPLGVGFTCIEDILPPDAEEKS
Ga0209503_103212242	3300027859	Marine	MIYGYILIMVIMLPSGDIDSRAVDWFEDPYECVEMAQYQHENHESPLGIGFTCIEDVYPPQQGENDG
Ga0185543_10459223	3300029318	Marine	MIYGYILIMVIMLPSGDIDSRAVDWFEDPYECVEMAQYQHENHESPLGIGFTCIEDVYPPQQGEKNDG
Ga0183748_10227182	3300029319	Marine	MIYGYYLIMVMMLPTGDVHGEALDWYFTPYECIEEAQHQHENKSQLGVGYVCIEDVLPPEEKNDG
Ga0183748_10394125	3300029319	Marine	MIYGYILIMVIMLPSGDIDSRAVDWFEDPYECVEMAQYQHENHESPLGIGFTCVEDVYPPQQGEKNDG
Ga0183748_10798823	3300029319	Marine	MIYGYYLIMVMMLPTGDVHGEALDWYFTPYECIEEAQYHHENKSQLGVGYVCIEDVLPPEGNKDG
Ga0183748_11136914	3300029319	Marine	MVIMLPTGDIDSRAVDWFEDPYECVEMAQYQHENHESPLGIGFTCIEDVYPSQQGENDG
Ga0183755_10814633	3300029448	Marine	MNTVYGFYLIMVVMLPSGDIKGEAVDWFFTPYECIEAAQFHHENHDTPLGVGFTCIEDILPPEEKDNG
Ga0183826_10291111	3300029792	Marine	ESRKMIYGYILIMVIMLPSGDIDSRAVDWFEDPYECVEMAQYQHENHESPLGIGFTCIEDVYPVKERDLDE
Ga0310344_109638673	3300032006	Seawater	MNTTIYGFYLIMVVMLPSGDIKSEAVDWYFTPYECVEMAQYHHENHETPIGVGFTCIEDILPPEENS
Ga0310342_1025652361	3300032820	Seawater	YILIMVIMLPTGDIDSRAVDWFEDPYECVEMAQYQHENHESPLGIGFTCIEDVYPVKERDLDE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F060033

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences