Metagenome / Metatranscriptome Family F060104

Basic Information
Family ID	F060104
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	73 residues
Representative Sequence	VIRLVAPLTVAFGALTLLTALATMMVAVPLAMVTMITGFCWYAERPRTPRRNGLCGGCRAGCVECRERIEIAG
Number of Associated Samples	117
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	75.94 %
% of genes near scaffold ends (potentially truncated)	34.59 %
% of genes from short scaffolds (< 2000 bps)	91.73 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (68.421 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (21.804 % of family members)
Environment Ontology (ENVO)	Unclassified (35.338 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (60.150 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.53% β-sheet: 0.00% Coil/Unstructured: 42.47%
Feature Viewer

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Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF00160	Pro_isomerase	25.56
PF02652	Lactate_perm	4.51
PF03572	Peptidase_S41	0.75
PF00643	zf-B_box	0.75
PF02547	Queuosine_synth	0.75
PF06781	CrgA	0.75
PF00745	GlutR_dimer	0.75
PF07748	Glyco_hydro_38C	0.75
PF01694	Rhomboid	0.75
PF00107	ADH_zinc_N	0.75
PF14592	Chondroitinas_B	0.75
PF00512	HisKA	0.75
PF00561	Abhydrolase_1	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG0652	Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family	Posttranslational modification, protein turnover, chaperones [O]	25.56
COG1620	L-lactate permease	Energy production and conversion [C]	4.51
COG0373	Glutamyl-tRNA reductase	Coenzyme transport and metabolism [H]	0.75
COG0383	Alpha-mannosidase	Carbohydrate transport and metabolism [G]	0.75
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	0.75
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	0.75
COG0809	S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase)	Translation, ribosomal structure and biogenesis [J]	0.75

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.42 %
All Organisms	root	All Organisms	31.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.42 %
cellular organisms	root	All Organisms → cellular organisms	31.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.42 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.42 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	26.32 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.42 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	26.32 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.42 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	23.31 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.75 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.42 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	21.05 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.75 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.75 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.75 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.42 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	21.05 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.75 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.75 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.75 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.42 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	21.05 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples	0.75 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.75 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.75 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.42 %
Pseudonocardia asaccharolytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia asaccharolytica	1.50 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	0.75 %
unclassified Nonomuraea	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → unclassified Nonomuraea	0.75 %
Pseudonocardia dioxanivorans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia dioxanivorans	0.75 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.75 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.42 %
Pseudonocardia asaccharolytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia asaccharolytica	1.50 %
Nonomuraea sp. SYSU D8015	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → unclassified Nonomuraea → Nonomuraea sp. SYSU D8015	0.75 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	0.75 %
Pseudonocardia dioxanivorans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia dioxanivorans	0.75 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.75 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2067725004\|GPKC_F5V46DG01BXSQS	Not Available	528	Open in IMG/M
2170459014\|G1P06HT01CDIFE	Not Available	517	Open in IMG/M
3300002568\|C688J35102_118117519	Not Available	531	Open in IMG/M
3300002568\|C688J35102_119951000	Not Available	824	Open in IMG/M
3300003324\|soilH2_10255702	Not Available	1305	Open in IMG/M
3300004081\|Ga0063454_101082378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	653	Open in IMG/M
3300004463\|Ga0063356_102056500	Not Available	866	Open in IMG/M
3300005093\|Ga0062594_102151113	Not Available	602	Open in IMG/M
3300005327\|Ga0070658_11263122	Not Available	642	Open in IMG/M
3300005328\|Ga0070676_11501418	Not Available	519	Open in IMG/M
3300005329\|Ga0070683_101042056	Not Available	785	Open in IMG/M
3300005329\|Ga0070683_101354832	Not Available	684	Open in IMG/M
3300005330\|Ga0070690_101257789	Not Available	592	Open in IMG/M
3300005334\|Ga0068869_100357664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1191	Open in IMG/M
3300005337\|Ga0070682_100073304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	2196	Open in IMG/M
3300005337\|Ga0070682_101144398	Not Available	654	Open in IMG/M
3300005338\|Ga0068868_100822462	Not Available	839	Open in IMG/M
3300005338\|Ga0068868_101798708	Not Available	579	Open in IMG/M
3300005340\|Ga0070689_100117668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	2120	Open in IMG/M
3300005353\|Ga0070669_100651364	Not Available	886	Open in IMG/M
3300005356\|Ga0070674_100155940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia dioxanivorans	1728	Open in IMG/M
3300005438\|Ga0070701_10381006	Not Available	889	Open in IMG/M
3300005456\|Ga0070678_102055199	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300005459\|Ga0068867_101736472	Not Available	586	Open in IMG/M
3300005535\|Ga0070684_100487015	Not Available	1142	Open in IMG/M
3300005548\|Ga0070665_102090899	Not Available	571	Open in IMG/M
3300005578\|Ga0068854_101581121	Not Available	597	Open in IMG/M
3300005578\|Ga0068854_102024237	Not Available	531	Open in IMG/M
3300005840\|Ga0068870_10180147	Not Available	1268	Open in IMG/M
3300006196\|Ga0075422_10374236	Not Available	625	Open in IMG/M
3300006358\|Ga0068871_102290034	Not Available	515	Open in IMG/M
3300006574\|Ga0074056_11698874	Not Available	549	Open in IMG/M
3300006853\|Ga0075420_100087148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia asaccharolytica	2760	Open in IMG/M
3300006881\|Ga0068865_100992214	Not Available	735	Open in IMG/M
3300006904\|Ga0075424_101665199	Not Available	676	Open in IMG/M
3300006954\|Ga0079219_10600860	Not Available	805	Open in IMG/M
3300009011\|Ga0105251_10205740	Not Available	886	Open in IMG/M
3300009094\|Ga0111539_11425572	Not Available	803	Open in IMG/M
3300009156\|Ga0111538_11165397	Not Available	974	Open in IMG/M
3300009162\|Ga0075423_12497090	Not Available	564	Open in IMG/M
3300009176\|Ga0105242_12006475	Not Available	621	Open in IMG/M
3300009176\|Ga0105242_12791349	Not Available	539	Open in IMG/M
3300009840\|Ga0126313_10612144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	878	Open in IMG/M
3300010037\|Ga0126304_11146330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	532	Open in IMG/M
3300010041\|Ga0126312_10972427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	621	Open in IMG/M
3300010044\|Ga0126310_10068058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2050	Open in IMG/M
3300010045\|Ga0126311_10031670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	3259	Open in IMG/M
3300011119\|Ga0105246_11321081	Not Available	669	Open in IMG/M
3300011332\|Ga0126317_10033460	Not Available	1226	Open in IMG/M
3300012212\|Ga0150985_108347946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1002	Open in IMG/M
3300012469\|Ga0150984_103629182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	515	Open in IMG/M
3300012904\|Ga0157282_10415355	Not Available	508	Open in IMG/M
3300012905\|Ga0157296_10325104	Not Available	548	Open in IMG/M
3300012986\|Ga0164304_11132611	Not Available	628	Open in IMG/M
3300012989\|Ga0164305_11171606	Not Available	664	Open in IMG/M
3300013104\|Ga0157370_11442119	Not Available	619	Open in IMG/M
3300013296\|Ga0157374_10687601	Not Available	1036	Open in IMG/M
3300014325\|Ga0163163_12566197	Not Available	567	Open in IMG/M
3300014326\|Ga0157380_11770644	Not Available	676	Open in IMG/M
3300014488\|Ga0182001_10209718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	720	Open in IMG/M
3300014745\|Ga0157377_10185039	Not Available	1313	Open in IMG/M
3300015200\|Ga0173480_10748207	Not Available	618	Open in IMG/M
3300015201\|Ga0173478_10881312	Not Available	500	Open in IMG/M
3300015372\|Ga0132256_100067649	All Organisms → cellular organisms → Bacteria	3376	Open in IMG/M
3300017792\|Ga0163161_11439219	Not Available	603	Open in IMG/M
3300018073\|Ga0184624_10136866	Not Available	1070	Open in IMG/M
3300018083\|Ga0184628_10067424	Not Available	1816	Open in IMG/M
3300018422\|Ga0190265_10302738	Not Available	1669	Open in IMG/M
3300018422\|Ga0190265_11504652	Not Available	786	Open in IMG/M
3300018429\|Ga0190272_10515477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1021	Open in IMG/M
3300018432\|Ga0190275_10608122	Not Available	1141	Open in IMG/M
3300018465\|Ga0190269_11484398	Not Available	557	Open in IMG/M
3300018466\|Ga0190268_10028695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1939	Open in IMG/M
3300018466\|Ga0190268_10065116	Not Available	1529	Open in IMG/M
3300018466\|Ga0190268_10828731	Not Available	706	Open in IMG/M
3300018469\|Ga0190270_10719778	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300018476\|Ga0190274_10024951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia asaccharolytica	3995	Open in IMG/M
3300018476\|Ga0190274_10313463	Not Available	1469	Open in IMG/M
3300018481\|Ga0190271_10471613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1362	Open in IMG/M
3300018920\|Ga0190273_10579516	Not Available	842	Open in IMG/M
3300018920\|Ga0190273_10646800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	808	Open in IMG/M
3300018920\|Ga0190273_11175417	Not Available	650	Open in IMG/M
3300019356\|Ga0173481_10457611	Not Available	639	Open in IMG/M
3300019767\|Ga0190267_11073915	Not Available	575	Open in IMG/M
3300020081\|Ga0206354_11387469	Not Available	676	Open in IMG/M
3300024426\|Ga0196960_10039337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1292	Open in IMG/M
3300025901\|Ga0207688_10147880	Not Available	1386	Open in IMG/M
3300025901\|Ga0207688_10385901	Not Available	867	Open in IMG/M
3300025904\|Ga0207647_10365065	Not Available	816	Open in IMG/M
3300025909\|Ga0207705_10068898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → unclassified Nonomuraea → Nonomuraea sp. SYSU D8015	2562	Open in IMG/M
3300025920\|Ga0207649_10303816	Not Available	1167	Open in IMG/M
3300025927\|Ga0207687_10123391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1941	Open in IMG/M
3300025931\|Ga0207644_10155007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1776	Open in IMG/M
3300025938\|Ga0207704_10459723	Not Available	1018	Open in IMG/M
3300025960\|Ga0207651_10766191	Not Available	854	Open in IMG/M
3300025972\|Ga0207668_11396487	Not Available	631	Open in IMG/M
3300025986\|Ga0207658_11517469	Not Available	613	Open in IMG/M
3300026023\|Ga0207677_10372663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1203	Open in IMG/M
3300026035\|Ga0207703_11059900	Not Available	778	Open in IMG/M
3300026041\|Ga0207639_11286505	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300026067\|Ga0207678_10278568	Not Available	1435	Open in IMG/M
3300026116\|Ga0207674_10422465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1288	Open in IMG/M
3300026116\|Ga0207674_11361338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	679	Open in IMG/M
3300026118\|Ga0207675_100178732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	2031	Open in IMG/M
3300026142\|Ga0207698_11715409	Not Available	643	Open in IMG/M
3300027750\|Ga0209461_10085457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	695	Open in IMG/M
3300027809\|Ga0209574_10040633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1150	Open in IMG/M
3300027907\|Ga0207428_10759133	Not Available	691	Open in IMG/M
3300028596\|Ga0247821_10423033	Not Available	835	Open in IMG/M
3300028597\|Ga0247820_11332179	Not Available	521	Open in IMG/M
3300028712\|Ga0307285_10115335	Not Available	718	Open in IMG/M
3300028714\|Ga0307309_10112683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	660	Open in IMG/M
3300028802\|Ga0307503_10825283	Not Available	531	Open in IMG/M
3300028810\|Ga0307294_10077673	Not Available	1016	Open in IMG/M
3300030336\|Ga0247826_11138160	Not Available	624	Open in IMG/M
3300031093\|Ga0308197_10492566	Not Available	501	Open in IMG/M
3300031164\|Ga0307502_10040528	Not Available	834	Open in IMG/M
3300031547\|Ga0310887_11091327	Not Available	512	Open in IMG/M
3300031847\|Ga0310907_10311020	Not Available	796	Open in IMG/M
3300031938\|Ga0308175_100232498	Not Available	1838	Open in IMG/M
3300033550\|Ga0247829_10947084	Not Available	716	Open in IMG/M
3300033989\|Ga0334924_003331	All Organisms → cellular organisms → Bacteria	1694	Open in IMG/M
3300034005\|Ga0334930_019498	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300034005\|Ga0334930_057554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	664	Open in IMG/M
3300034006\|Ga0334934_013419	Not Available	1093	Open in IMG/M
3300034025\|Ga0334940_160779	Not Available	610	Open in IMG/M
3300034027\|Ga0334949_155642	Not Available	583	Open in IMG/M
3300034029\|Ga0334951_005420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	3727	Open in IMG/M
3300034029\|Ga0334951_076592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	855	Open in IMG/M
3300034030\|Ga0334952_001938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	7213	Open in IMG/M
3300034132\|Ga0334915_090782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	632	Open in IMG/M
3300034133\|Ga0334916_009591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1072	Open in IMG/M
3300034221\|Ga0334937_084301	Not Available	877	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	56.39%
Host-Associated	Host-Associated	42.86%
Engineered	Engineered	0.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.14%
Plants	Host-Associated → Plants	42.86%
Aquatic	Environmental → Aquatic	2.26%
Solid Waste	Engineered → Solid Waste	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	17.29%
Sediment	Environmental → Aquatic → Sediment	1.50%
Roots	Host-Associated → Plants → Roots	1.50%
Freshwater	Environmental → Aquatic → Freshwater	0.75%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.75%
Phylloplane	Host-Associated → Plants → Phylloplane	0.75%
Grass	Engineered → Solid Waste → Grass	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.59%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	15.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.03%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.53%
Loam	Environmental → Terrestrial → Soil → Loam	8.27%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	7.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.50%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.50%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.75%
Sand	Environmental → Terrestrial → Soil → Sand	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.75%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.75%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.75%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.75%
Composting	Engineered → Solid Waste → Grass → Composting	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	15.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.53%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	7.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.02%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.26%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.26%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.50%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	1.50%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.50%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.75%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.75%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	21.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	6.02%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.26%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	5.26%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	5.26%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.26%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.51%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.76%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.01%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.01%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.26%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	2.26%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.50%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	1.50%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.50%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.75%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.75%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.75%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.75%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.75%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.75%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.75%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.75%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2067725004	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
2170459014	Litter degradation PV2	Engineered	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024426	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_5	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027809	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031164	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 16_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033989	Biocrust microbial communities from Mojave Desert, California, United States - 20HNC	Environmental	Open in IMG/M
3300034005	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 26HNS	Environmental	Open in IMG/M
3300034006	Biocrust microbial communities from Mojave Desert, California, United States - 30SMC	Environmental	Open in IMG/M
3300034025	Biocrust microbial communities from Mojave Desert, California, United States - 36SMC	Environmental	Open in IMG/M
3300034027	Biocrust microbial communities from Mojave Desert, California, United States - 45SNC	Environmental	Open in IMG/M
3300034029	Biocrust microbial communities from Mojave Desert, California, United States - 47SNC	Environmental	Open in IMG/M
3300034030	Biocrust microbial communities from Mojave Desert, California, United States - 48SNC	Environmental	Open in IMG/M
3300034132	Biocrust microbial communities from Mojave Desert, California, United States - 11HMC	Environmental	Open in IMG/M
3300034133	Biocrust microbial communities from Mojave Desert, California, United States - 12HMC	Environmental	Open in IMG/M
3300034221	Biocrust microbial communities from Mojave Desert, California, United States - 33SMC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPKC_02636470	2067725004	Soil	VIRLVAALTVAFGALTLLTALATMMVAVPLAMVTMITGFCWYAERPRTPRRNGLCGGCRAGCVECRERIEIAG
2PV_03724440	2170459014	Switchgrass, Maize And Mischanthus Litter	VIRLVAPLTIAFGALTLLTALATMAVAIPLAMVTMITGFCWYMERPRVPQRNGLCGGCRA
C688J35102_1181175191	3300002568	Soil	VIRLVAPLTVVLGVLTLITALAMLMVAVPLAMATMITGFCWYVERPRATRRDGLCTWCRAGCVECRERIEIGSAR*
C688J35102_1199510001	3300002568	Soil	VIRLVAPLTVAFGVLTLLTALATMMVAVPLAMVTMITGFCWYAERPRTPRLNGLCGGCRAGCVECRERIEIAS*
soilH2_102557022	3300003324	Sugarcane Root And Bulk Soil	VTRLIAPVTVALGVLTLLTGLAAMMVAVPLAMATMIMGFGWYVERPRTPRRNGLCGGCQAGCVECRERIELAG*
Ga0063454_1010823781	3300004081	Soil	ELPGGPVIRLVAPLTVAFGVLTLLTALATMMVAVPLAMVTMITGFCWYAERPRTARHNGLCGGCRAGCVECRERIEIAG*
Ga0063356_1020565002	3300004463	Arabidopsis Thaliana Rhizosphere	VIRLVAALTVAFGALTLLTALATMMVAVPLAMVTMITGFCWYAERPRTPRRNGLCGGCRAGCVECRERIEIAG*
Ga0062594_1021511131	3300005093	Soil	VIRLVAPLTVAFGALTLLTALAAMAVAIPLAMVTMITGFCWYMERPRVPQRNGLCGGCRA
Ga0070658_112631221	3300005327	Corn Rhizosphere	VIRLVAPLTIAFGALTLLTALATMAVAIPLAMVTMITGFCWYMERPRVPQRNGLCGGCRAGCVECRERIEIVS*
Ga0070676_115014182	3300005328	Miscanthus Rhizosphere	VIRLVAPLTIAFGALTLLTALATLMVAIPLAMVTMITGFCWYMERSRVPRRSGLCGGCRAGCVECRERIEIAG*
Ga0070683_1010420561	3300005329	Corn Rhizosphere	VIRLVAPLTVAFGALTLLTALAAMAVAIPLAMVTMITGFCWYMERPRVPQRNGLCGGCRAGCVECRERIEI
Ga0070683_1013548322	3300005329	Corn Rhizosphere	VIRLVAPLTIAFGALTLLTALATLMVAIPLAMVTMITGFCWYMERSRVPRRSGLCGGCRAGCVECRERIE
Ga0070690_1012577892	3300005330	Switchgrass Rhizosphere	VIRLVAPLTVAFGALTLLTALAAMAVAIPLAMVTMITGFCWYMERPRVPQRNGLCGGCRAGCVECRERIEIVS*
Ga0068869_1003576643	3300005334	Miscanthus Rhizosphere	LPGGPVIRLVAPLTVAFGALTLLTALAAMAVAIPLAMVTMITGFCWYMERPRVPQRNGLCGGCRAGCVECRERIEIVS*
Ga0070682_1000733043	3300005337	Corn Rhizosphere	VIRLVAPLTVVLGAMTLVTALAVMMVAVPLAMATMITGFCWYVERPRPVRRDGLCTWCRAGCVECRERIELGSAR*
Ga0070682_1011443981	3300005337	Corn Rhizosphere	VIRLVAPLTVAFGVLTLLTALATMMVAVPLAMVTMITGFCWYAERPRTARHNGLCGGCRAGCVECRERIEIAS*
Ga0068868_1008224622	3300005338	Miscanthus Rhizosphere	IRLVAALTVAFGALTLLTALATMMVAVPLAMVTMITGFCWYAERPRTSRRNGLCGGCRAGCVECRERIEIAG*
Ga0068868_1017987081	3300005338	Miscanthus Rhizosphere	VIRLVAPLTIAFGLLTLLTALATLMVAIPLAMVTMITGFCWYMERSRVPRRTGLCGGCRAGC
Ga0070689_1001176682	3300005340	Switchgrass Rhizosphere	VIRLVAPLTIAFGALTLLTALATMAVAIPLAMVTMITGFCWYMERPRIPQRNGLCGGCRAGCVECRERIEIVS*
Ga0070669_1006513641	3300005353	Switchgrass Rhizosphere	APLTIAFGALTLLTALATMAVAIPLAMVTMITGFCWYMERPRVPQRNGLCGGCRAGCVECRERIEIVS*
Ga0070674_1001559401	3300005356	Miscanthus Rhizosphere	FGALTLLTALATMMVAVPLAMVTMITGFCWYMERPRVPQRNGLCGGCRAGCVECRERIEIVS*
Ga0070701_103810063	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	VIRLVAPLTIAFGALTLLTALATMAVAIPLAMVTMITGFCWYMERPRVPQRNGLCGGCRAGCVECRERIEI
Ga0070678_1020551992	3300005456	Miscanthus Rhizosphere	HGIELPGGPVIRLVAALTVAFGALTLLTALATMMVAVPLAMVTMITGFCWYAERPRTPRPNGLCGGCRAGCVECRERIEIAG*
Ga0068867_1017364721	3300005459	Miscanthus Rhizosphere	VIRLVAPLTVAFGALTLLTALATMMVAVPLAMVTMITGFCWYAERPRTPRRNGLCGGCRAGCVECRERIEIAG*
Ga0070684_1004870151	3300005535	Corn Rhizosphere	PGGPVIRLVAPLTIAFGALTLLTALATMAVAIPLAIVTMITGFCWYMERPRVPQRNGLCGGCRAGCVECRERIEIVS*
Ga0070665_1020908992	3300005548	Switchgrass Rhizosphere	VIRLVAPLTIAFGALTLVTALATMMVAVPLAMVTMITGFCWYAERPRTPQTNGLCGGCRAGCVECRERIEIAG*
Ga0068854_1015811211	3300005578	Corn Rhizosphere	VIRLVAALTVAFGALTLLTALATMMVAVPLAMVTMITGFCWYAERPRTPRHNGLCGGCRAGCVECRERIEIAG*
Ga0068854_1020242371	3300005578	Corn Rhizosphere	PVIRLVAPLTVAFGALTLLTALAAMAVAIPLAMVTMITGFCWYMERPRVPQRNGLCGGCRAGCVECRERIEIVS*
Ga0068870_101801474	3300005840	Miscanthus Rhizosphere	VIRLVAPLTVAFGALTLLTALAALAVAIPLAMVTMITGFCWYAERPRTPRHNGLCGGCRAGCVECRERIEIAG*
Ga0075422_103742361	3300006196	Populus Rhizosphere	VAFGALTLLTALAALAVAIPLAMVTMITGFCWYMERPRIPQRNGLCGGCRAGCVECRERIEIVS*
Ga0068871_1022900341	3300006358	Miscanthus Rhizosphere	VIRLVAPLTIAFGALTLLTALAALAVAIPLAMVTMITGFCWYAERPRTPRHNGLCGGCRAGCVECRERIEIAG*
Ga0074056_116988742	3300006574	Soil	VIRLVAPLTIAFGALTLLTALATMMVAVPLAMVTMITGFCWWAERPRTPRRNGLCGGCRAGCVECRERIEIAG*
Ga0075420_1000871484	3300006853	Populus Rhizosphere	VTRLVAPLTIAFGALTLLTALAATMVAIPLAMVTMITGFCWYVERPRVPRHNGLCGGCRAGCVECRERIEIAS*
Ga0068865_1009922142	3300006881	Miscanthus Rhizosphere	VIRLVAALTVAFGALTLLTALATMMVAVPLAMVTMITGFCWYAERPRTSRRNGLCGGCRAGCVECRERIEIAG*
Ga0075424_1016651992	3300006904	Populus Rhizosphere	VIRLVAPLTVAFGALTLLTALAALAVAIPLAMVTMITGFCWYMERPRVPQRNGLCGGCRAGCVECRERIEIVS*
Ga0079219_106008602	3300006954	Agricultural Soil	VIRLVAPLTVAFGALTLLTALAALAVAIPLAMVTMITGFCWYMERPRIPQRNGLCGGCRAGCVECRERIEIVS*
Ga0105251_102057402	3300009011	Switchgrass Rhizosphere	VSVATPINGIKLPGGPVIRLVAALTVAFGALTLLTALATMMVAVPLAMVTMITGFCWYAERPRTPRTNGLCGGCRAGCVECRERIEIAG*
Ga0111539_114255722	3300009094	Populus Rhizosphere	GVGNDTDRGTQLPGGPVIRLVAPLTVAFGALTLLTAMAALAVAIPLAMVTMITGFCWYMERPRVPQRNGLCGGCRAGCVECRERIEIVS*
Ga0111538_111653971	3300009156	Populus Rhizosphere	VIRLVAPLTVAFGALTLLTALAALAVAIPLAMVTMITGFCWYMERPRIPQRNGLCGGCRAGCVECRE
Ga0075423_124970902	3300009162	Populus Rhizosphere	VIRLVAPLTVALGALTLLTAMAALAVAIPLAMVTMITGFCWYMERPRVPQRNGLCDGCRAGCVECRERIEIVS*
Ga0105242_120064751	3300009176	Miscanthus Rhizosphere	VIRLVAPLTIAFGALTLVTALATMMVAVPLAMVTMITGFCWYAERPRTPRTNGLCGGCRAGCVECRERIEIAG*
Ga0105242_127913492	3300009176	Miscanthus Rhizosphere	VIRLVAPLTVAFGVLTLLTALATLMVAIPLAMVTMITGFCWYMERSRVPRRSGLCGGCRA
Ga0126313_106121442	3300009840	Serpentine Soil	VTRLVAPLTVALGVLTLVTALAVMMVAVPLAMATMITGFCWYVERPRPVRSAGLCTWCRAGCVECRERIELGAR*
Ga0126304_111463302	3300010037	Serpentine Soil	PLTVAFGVLTLLTALATMMVAVPLAMVTMITGFCWYAERPRTPRLNGLCGGCRAGCVECRERIEIAS*
Ga0126312_109724271	3300010041	Serpentine Soil	RSRTELPGGPVIRLVAPLTVAFGVLTLLTALATMMVAVPLAMVTMITGFCWYAERPRTARHNGLCGGCRAGCVECRERIEIAS*
Ga0126310_100680584	3300010044	Serpentine Soil	VIRLVAPLTVAFGVLTLLTALATMMVAVPLAMVTMITGFCWYAERPRTARHNGLCGGCRAGCVECRERIEIAG*
Ga0126311_100316702	3300010045	Serpentine Soil	VIRLVAPLTVAFGVLTLLTALATMMVAVPLAMVTMITGFCWYAERPRTARHNGLCGGCRAGCVECRERIEFAG*
Ga0105246_113210812	3300011119	Miscanthus Rhizosphere	VIRLVAALTVAFGALTLLTALATMMVAVPLAMVTMITGFCWYMERPRVPQRNGLCGGCRAGCVECRERIEIVS*
Ga0126317_100334602	3300011332	Soil	VIRLVAPLTVAFGVLTLLTALATMMVAVPLAMVTMITGFCWYAERPRTARHNGLCGGCRAGCVECRERIGIAS*
Ga0150985_1083479462	3300012212	Avena Fatua Rhizosphere	VIRLVAPLTIVLGTLTLLTALAAMMVAVPLAMATMITAFGWYIERPRTVRSNGLCGGCPAGCVECRERIEIEGAH*
Ga0150984_1036291821	3300012469	Avena Fatua Rhizosphere	GRVLELPGGPVIRLVAPLTIVLGTLTLLTALAAMMVAVPLAMATMITAFGWYIERPRTVRSNGLCGGCPAGCVECRERIEIEGAH*
Ga0157282_104153551	3300012904	Soil	VIRLVAPLTVAFGALTLLTALATMMVAVPLAMVTMITGFCWYAERPRTPRSNGLCGGCRAGCVECRERIEIAG*
Ga0157296_103251042	3300012905	Soil	VIRLVAPLTVAFGALTLLTALATMMVAVPLAMVTMITGFCWYAERPRTSRRNGLCGGCRAGCVECRERIEIAG*
Ga0164304_111326112	3300012986	Soil	VIRLVAPLTVALGVLTLVTALAVMMVAVPLAMATMITGFCWYAERPRTPRHNGLCGGCRAGCVECRERIEIAG*
Ga0164305_111716061	3300012989	Soil	VTRLVAPLTVAFGALTLLTALATMMVAVPLAMVTMITGFCWYAERPRTPRRNGLCGGCRAGCVECRERIEIAG*
Ga0157370_114421191	3300013104	Corn Rhizosphere	RGTQLPGGPVIRLVAPLTIAFGALTLLTALATMAVAIPLAMVTMITGFCWYMERPRVPQRNGLCGGCRAGCVECRERIEIVS*
Ga0157374_106876012	3300013296	Miscanthus Rhizosphere	VIRLVAPLTVAFGALTLLTALATMAVAIPLAMVTMITGFCWYMERPRVPQRNGLCGGCRAGCVECRERIEIVS*
Ga0163163_125661971	3300014325	Switchgrass Rhizosphere	VIRLVAPLTIAFGALTLVTALATMMVAVPLAMVTMITGFCWYAERPRTPRRNGLCGGCRAGCVECRERIEIAG*
Ga0157380_117706441	3300014326	Switchgrass Rhizosphere	VIRLVAPLTIAFGLLTLLTALATLMVAIPLAMVTMITGFCWYMERSRVPRRSGLCGGCRAGCVECRERIEIAG*
Ga0182001_102097182	3300014488	Soil	VTRLVAPLTVAFGVLTLITALATLMVAVPLAMVTMITGFCWYVERPRTPRHNGLCGGCRAGCVECRERIEIAS*
Ga0157377_101850391	3300014745	Miscanthus Rhizosphere	VIRLVAALTVAFGALTLLTALATMMVAVPLAMVTMITGFCWYAERPRTPRRNGLCGGCRAGCVECRERIE
Ga0173480_107482071	3300015200	Soil	VIRLVAPLTVAFGALTLLTALATMMVAVPLAMVTMITGFCWYAERPRTPRHNGLCGGCRAGCVECRERIEIAG*
Ga0173478_108813121	3300015201	Soil	VIRLVAPLTIVLGTLTLLTALAAMMVAVPLAMATMITAFGWYIERPRAVRSNGLCGGCPDGCVECRERIEIEGA
Ga0132256_1000676491	3300015372	Arabidopsis Rhizosphere	VSVATPINGIELPGGPVIRLVAPLTIAFGALTLVTALATMMVAVPLAMVTMITGFCWYAERPRTPRTNGLCGGCRAGCVECRERIEIAG*
Ga0163161_114392192	3300017792	Switchgrass Rhizosphere	VIRLVAPLTIAFGALTLLTALATMAVAIPLAMVTMITGFCWYMERPRVPQRNGLCGGCRAGCVECRERIEIVS
Ga0184624_101368662	3300018073	Groundwater Sediment	VIRLVAPLTIAFGALTLLTALATMMVAVPLAMVTMITGFCWYAERPRTPRSNGLCGGCRAGCVECRERIEIAG
Ga0184628_100674243	3300018083	Groundwater Sediment	VIRLVAPLTVAFGALTLLTALATMMVAVPLAMVTMITGFCWWAERPRTPRRNGLCAGCQAGCVECRERIEIAG
Ga0190265_103027382	3300018422	Soil	VIRLVAPLTVAFGVLTLLTALATMMVAVPLAMVTMITGFCWYVERPRTPRHNGLCGGCRAGCVECRERIEIAS
Ga0190265_115046522	3300018422	Soil	VIRLVAPLTIAFGALTLLTALATLMVSIPLAMVTMITGFCWYMERPRVPRRNGLCGGCRSGCVECRERIEIAG
Ga0190272_105154772	3300018429	Soil	VIRLVAPLTVAFGVLTLLTALATMMVAVPLAMVTMITGFCWYAERPRTPRHNGLCGGCRAGCVECRERIEIAS
Ga0190275_106081222	3300018432	Soil	VIRLVAPLTVAFGVLTLLTALATMMVAVPLAMVTMITGFCWYAERPRTPRLNGLCGGCRAGCVECRERIEIAS
Ga0190269_114843981	3300018465	Soil	VIRFLAPLTIVLGVLTVLMTLLLSMVAVPLALATIITGFGWYMEHPRPATRNGLCGGCSAGCVECRE
Ga0190268_100286952	3300018466	Soil	VIRFLAPLTIVLGVLTVLMTLLLSMVAVPLALATIITGFGWYMEHPRPATRNGLCGGCSAGCVECRERIELKGAN
Ga0190268_100651163	3300018466	Soil	VIRLVAPLTVALGVLTLVTALAVMMVAVPLGMATMITGFCWYVERPRPVRSAGLCTWCRAGCVECRERIELGAR
Ga0190268_108287311	3300018466	Soil	VTRLVAPLTIAFGALTLLTALATLMVAIPLAMVTMITGFCWYMERSRVPRRSGLCGGCRAGCVECRERIEIAS
Ga0190270_107197783	3300018469	Soil	APLTIAFGLLTLLTALATLMVAIPLAMVTMITGFCWYMERSRVPRRTGLCGGCRAGCVECRERIEIAS
Ga0190274_100249516	3300018476	Soil	VIRLVAPLTIAFGALTLLTALATLMVAIPLAMVTMITGFCWYMERSRVPRRSGLCGGCRAGCVECRERIEIAS
Ga0190274_103134632	3300018476	Soil	VIRLVAPLTVAFGVLTMLTALATMMVAVPLAMVTMITGFCWYAERPRTPRLNGLCGGCRAGCVECRERIEIAS
Ga0190271_104716131	3300018481	Soil	RLVAPLTIAFGLLTLLTALATLMVAIPLAMVTMITGFCWHMERSRVPRRTGLCGGCRAGCVECRERIEIAS
Ga0190273_105795162	3300018920	Soil	VIRLVAPLTVVLGIMTLASALAVSMVAVPFAMATMITGFCWYVERPRPVRRNGLCTWCPAGCVECRERIELGGAR
Ga0190273_106468002	3300018920	Soil	VIRLVAPLTVALGVLTLVTALAVMMVAVPLAMATMITGFCWYVERPRPARSGGLCTWCRAGCVECRERIELGAR
Ga0190273_111754171	3300018920	Soil	VTRLVAPLTVALGVLTLVTALAAMMVAVPLAMATMITGFCWYVERPRPVRSAGLCTWCRAGCVECRERIELGAR
Ga0173481_104576112	3300019356	Soil	VIRLVAPLTVAFGALTLLTALATMMVAVPLAMVTMITGFCWYAERPRTPRHNGLCGGCRAGCVECRERIEIAG
Ga0190267_110739152	3300019767	Soil	VTRLVAPLTVALGVLTLVTALAVMMVAVPLAMATMITGFCWYVERPRAARRDGLCGGCTACCVECRERIELGSAR
Ga0206354_113874692	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	VIRLVAPLTVAFGALTLLTALAAMAVAIPLAMVTMITGFCWYMERPRVPQRNGLCGGCRAGCVECRERIEIVS
Ga0196960_100393372	3300024426	Soil	VTRLVAPLTVAFGVLTLITALATMMVAVPLAMATMITGFCWYVERPRTPRHNGLCGGCRAGCVECRERIEIAS
Ga0207688_101478804	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VIRLVAPLTIAFGALTLLTALATLMVAIPLAMVTMITGFCWYMERSRVPRRTGLCGGCRAGCVECRERIEIAS
Ga0207688_103859013	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VIRLVAPLTIAFGALTLLTALATMAVAIPLAMVTMITGFCWYMERPRVPQRNGLCDGCRAGCVECRERIEIVS
Ga0207647_103650651	3300025904	Corn Rhizosphere	VIRLVAALTVAFGALTLLTALATMMVAVPLAMVTMITGFCWYAERPRTSRRNGLCGGCRAGCVECRERIEIA
Ga0207705_100688984	3300025909	Corn Rhizosphere	VIRLVAPLTVAFGALTLLTALAALAVAIPLAMVTMITGFCWYMERPRVPQRNGLCGGCRAGCVECRERIEIVS
Ga0207649_103038162	3300025920	Corn Rhizosphere	VIRLVAPLTVVFGALTLLTALAAMAVAIPLAMVTMITGFCWYMERPRVPQRNGLCGGCRAGCVECRERIEIVS
Ga0207687_101233913	3300025927	Miscanthus Rhizosphere	VIRLVAALTVAFGALTLLTALATMMVAVPLAMVTMITGFCWYAERPRTSRRNGLCGGCRAGCVECRERIEIAG
Ga0207644_101550076	3300025931	Switchgrass Rhizosphere	VIRLVAPLTIAFGALTLLTALATMAVAIPLAMVTMITGFCWYMERPRIPQRNGLCGGCRAGCVEC
Ga0207704_104597232	3300025938	Miscanthus Rhizosphere	VIRLVAPLTIAFGALTLVTALATMMVAVPLAMVTMITGFCWYAERPRTPRRNGLCGGCRAGCVECRERIEIAG
Ga0207651_107661912	3300025960	Switchgrass Rhizosphere	DTDRGTQLPGGPVIRLVAPLTIAFGALTLLTALATMAVAIPLAMVTMITGFCWYMERPRVPQRNGLCGGCRAGCVECRERIEIVS
Ga0207668_113964871	3300025972	Switchgrass Rhizosphere	VIRLVAPLTIAFGALTLLTALATLMVAIPLAMVTMITGFCWYMERSRVPRRTGLCGGCRAGCVECR
Ga0207658_115174691	3300025986	Switchgrass Rhizosphere	VIRLVAPLTIAFGALTLVTALATMMVAVPLAMVTMITGFCWYAERPRTPRRNGLCGGCRAGCVECRERIEIAAMA
Ga0207677_103726633	3300026023	Miscanthus Rhizosphere	IRLVAALTVAFGALTLLTALATMMVAVPLAMVTMITGFCWYAERPRTSRRNGLCGGCRAGCVECRERIEIAG
Ga0207703_110599002	3300026035	Switchgrass Rhizosphere	VIRLVAPLTIAFGALTLVTALATMMVAVPLAMVTMITGFCWYMERPRVPQRNGLCGGCRAGCVECRERIEIVS
Ga0207639_112865051	3300026041	Corn Rhizosphere	GRDTDRGTQLPGGPVIRLVAPLTIAFGALTLLTALATMAVAIPLAMVTMITGFCWYMERPRVPQRNGLCGGCRAGCVECRERIEIVS
Ga0207678_102785685	3300026067	Corn Rhizosphere	VIRLVAPLTIAFGALTLVTALATMMVAVPLAMVTMITGFCWYAERPRTPRHNGLCGGCRAGCVECRERIEIAG
Ga0207674_104224653	3300026116	Corn Rhizosphere	ALTVAFGALTLLTALATMMVAVPLAMVTMITGFCWYAERPRTSRRNGLCGGCRAGCVECRERIEIAG
Ga0207674_113613382	3300026116	Corn Rhizosphere	PGGPVIRLVAPLTIAFGLLTLLTALATLMVAIPLAMVTMITGFCWYMERSRVPRRTGLCGGCRAGCVECRERIEIAS
Ga0207675_1001787321	3300026118	Switchgrass Rhizosphere	VIRLVAPLTVAFGALTLLTALATMMVAVPLAMVTMITGFCWYMERPRVPQRNGLCGGCRAGCVECRERIEIVS
Ga0207698_117154092	3300026142	Corn Rhizosphere	VIRLVAPLTVAFGVLTLLTALATMMVAVPLAMVTMITGFCWYAERPRTARHNGLCGGCRAGCVECRERIEIAS
Ga0209461_100854572	3300027750	Agave	VTRLVAPLTIAFGALTLLTALATMMVAVPLAMVTMITGFCWYVERPRPVRSAGLCTWCRAGCVECRERIELGAR
Ga0209574_100406331	3300027809	Agave	VTRLVAPLTVAFGVLTLITALATLMVAVPLAMVTMITGFCWYVERPRTPRHNGLCSGCRAGCVECRERIEIAS
Ga0207428_107591332	3300027907	Populus Rhizosphere	VIRLVAPLTIAFGALTLLTALATLMVAIPLAMVTMITGFCWYMERSRVPRRSGLCGGCRAGCVECRERIEIAG
Ga0247821_104230332	3300028596	Soil	VTRLVAPLTIAFGALTLLTAMAALMVAIPLAMVTMITGFCWYVERPRVPRHNGLCGGCRAGCVECRERIEIAS
Ga0247820_113321792	3300028597	Soil	VIRLVAPLTIAFGLLTLLTALATLMVAIPLAMVTMITGFCWYMERSRVPRRTGLCGGCRAGCVECRERIEIAS
Ga0307285_101153352	3300028712	Soil	VIRLVAPLTVAFGALTLLTALATMMVAVPLAMVTMITGFCWYAERPRTPRSNGLCGGCRAGCVECRERIEIAG
Ga0307309_101126831	3300028714	Soil	LPGGPVIRLVAPLTVAFGVLTLLTALATMMVAVPLAMVTMITGFCWYAERPRTARHNGLCGGCRAGCVECRERIEIAS
Ga0307503_108252831	3300028802	Soil	VAPLTIAFGALTLVTALATMMVAVPLAMVTMITGFCWYAERPRTPRTNGLCGGCRAGCVECRERIEIAG
Ga0307294_100776732	3300028810	Soil	VIRLVAPLTVAFGVLTLLTALATMMVAVPLAMVTMITGFCWYAERPRAPRHNGLCGGCRAGCVECRERIEIAS
Ga0247826_111381602	3300030336	Soil	VIRLVAPLTIAFGLLTLLTALATLMVAVPLAMVTMITGFCWYMERSRVPRRTGLCGGCRAGCVECRERIEIAS
Ga0308197_104925662	3300031093	Soil	VIRLVAPLTVAFGVLTLLTALATMMVAVPLAMVTMITGFCWYAERPRAPRHNGLCGGCRAGCVEC
Ga0307502_100405282	3300031164	Soil	PTELPGGPVIRLVAPLTVAFGVLTLLTALATMMVAVPLAMVTMITGFCWYAERPRTARHNGLCGGCRAGCVECRERIEIAS
Ga0310887_110913271	3300031547	Soil	LPGGPVIRLVAPLTIAFGALTLVTALATMMVAVPLAMVTMITGFCWYAERPRTPRTNGLCGGCRAGCVECRERIEIAG
Ga0310907_103110201	3300031847	Soil	VIRLVAPLTIAFGALTLVTALATMMVAVPLAMVTMITGFCWYAERPRTPRTNGLCGGCRAGCVECRERIEIAG
Ga0308175_1002324982	3300031938	Soil	VIRLVAPLTVAFGALTLLTALATMMVAVPLAMVTMITGFCWYAERPRTPRRNGLCGGCRAGCVECRERIEIAG
Ga0247829_109470842	3300033550	Soil	LTIAFGLLTLLTALATIRVAVPLAMVTMITGFCWYMERSRVPRRTGLCGGCRAGCVECRERIEIAS
Ga0334924_003331_839_1054	3300033989	Hypolithic Biocrust	VIRLVAPLTVTFGVLTLVAALAMSMIAVPLAMATMVAGFCWSVERPGRGVPCSWCQAGCVECRERIELGAH
Ga0334930_019498_736_951	3300034005	Sub-Biocrust Soil	VIRLVAPLTVTFGVLTLVAALAMSMIAVPLAMATMVAGFCWSVERPGHGVPCSWCQAGCVECRERIELGAH
Ga0334930_057554_131_355	3300034005	Sub-Biocrust Soil	VIRLVAPLTVALGVLTLVTALAVMMVAVPLAMATMITGFCWYVERPRPVRSAGLCTWCRAGCVECRERIELGAR
Ga0334934_013419_14_211	3300034006	Biocrust	VALGVLTLVTALAVMMVAVPLAMATMITGFCWYVERPRPVRSAGLCTWCRAGCVECRERIELGAR
Ga0334940_160779_1_207	3300034025	Biocrust	MIRLVAPLTVAFGVLTLLTALATMMVAVPLAMVTMITGFCWYAERPRTPRLNGLCGGCRAGCVECRERI
Ga0334949_155642_253_477	3300034027	Biocrust	VIRLVAPLTVALGVLTLVTALAVMMVAVPLAMATMITGFCWYVERPRPVRRAGLCTWCRAGCVECRERIELGAR
Ga0334951_005420_2762_2977	3300034029	Biocrust	VIRLVAPLTVTFGVLTLVAALAMSMIAVPLAMATMVAGFCWSVERPGRGAPCSWCHAGCVECRERIELGAH
Ga0334951_076592_609_833	3300034029	Biocrust	VTRLVAPLTVALGVLTLVTALAVMMVAVPLAMATMITGFCWYVERPRPVRSAGLCTWCRAGCVECRERIELGAR
Ga0334952_001938_1808_2023	3300034030	Biocrust	VIRLVAPLTVTFGVLTLVAALAMSMIAVPLAMATMVAGFCWSVERPGRGAPCSWCQAGCVECRERIELGAH
Ga0334915_090782_58_279	3300034132	Hypolithic Biocrust	VIRLVAPLTVVLGVLTLIAALAVSMIAVPLAMATMITGFCWYVERPRPRDGLCTWCRAGCVECRERIELGGAR
Ga0334916_009591_1_210	3300034133	Hypolithic Biocrust	VTRLVAPLTVALGVLTLVTALAVMMVAVPLAMATMITGFCWYVERPRPARSGGLCTWCRAGCVECRERIE
Ga0334937_084301_555_779	3300034221	Biocrust	VTRLVAPLTVALGVLTLVTALAVMMVAVPLAMATMITGFCWYVERPRPARSGGLCTWCRAGCVECRERIELGAR

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060104

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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