Metagenome Family F060205

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060205
Family Type	Metagenome
Number of Sequences	133
Average Sequence Length	107 residues
Representative Sequence	VGDHPSDNEAYVGIARDKCGENEETLIIRENGYRWEREDGLSCRYLSGKARIDNTIPASTKTVGVWVFHIIAGCIRRPAEGAIRKYTQSFDMYVSKGTLWIENLRSDEKP
Number of Associated Samples	99
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	40.15 %
% of genes near scaffold ends (potentially truncated)	66.17 %
% of genes from short scaffolds (< 2000 bps)	96.24 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.248 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (30.075 % of family members)
Environment Ontology (ENVO)	Unclassified (39.098 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.135 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 32.61% Coil/Unstructured: 67.39%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF04392	ABC_sub_bind	2.26
PF04539	Sigma70_r3	2.26
PF00072	Response_reg	1.50
PF06411	HdeA	1.50
PF03401	TctC	0.75
PF00027	cNMP_binding	0.75
PF03171	2OG-FeII_Oxy	0.75
PF07992	Pyr_redox_2	0.75
PF01381	HTH_3	0.75
PF12844	HTH_19	0.75
PF00656	Peptidase_C14	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	2.26
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	2.26
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.26
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.75
COG4249	Uncharacterized conserved protein, contains caspase domain	General function prediction only [R]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.25 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.25 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.25 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	99.25 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	99.25 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	96.99 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.75 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	96.99 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.75 %
Unclassified	root	N/A	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17360435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1026	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1042174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	705	Open in IMG/M
3300001867\|JGI12627J18819_10042042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1907	Open in IMG/M
3300004633\|Ga0066395_10273139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	914	Open in IMG/M
3300005332\|Ga0066388_100209483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2574	Open in IMG/M
3300005332\|Ga0066388_100668896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1650	Open in IMG/M
3300005332\|Ga0066388_100809299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1528	Open in IMG/M
3300005332\|Ga0066388_101251088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1274	Open in IMG/M
3300005332\|Ga0066388_102174822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1000	Open in IMG/M
3300005332\|Ga0066388_103831999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	767	Open in IMG/M
3300005332\|Ga0066388_108758292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300005366\|Ga0070659_101677674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	568	Open in IMG/M
3300005436\|Ga0070713_100480324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1170	Open in IMG/M
3300005445\|Ga0070708_101131924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	733	Open in IMG/M
3300005454\|Ga0066687_10857702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	541	Open in IMG/M
3300005764\|Ga0066903_100562171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1961	Open in IMG/M
3300005764\|Ga0066903_103599046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	834	Open in IMG/M
3300005764\|Ga0066903_103999829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	790	Open in IMG/M
3300005764\|Ga0066903_104702787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	727	Open in IMG/M
3300005764\|Ga0066903_105850963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	645	Open in IMG/M
3300005764\|Ga0066903_106836569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	592	Open in IMG/M
3300005764\|Ga0066903_108736687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	515	Open in IMG/M
3300005842\|Ga0068858_102578357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300006028\|Ga0070717_10737538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	895	Open in IMG/M
3300006034\|Ga0066656_10674924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	665	Open in IMG/M
3300006175\|Ga0070712_100900116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	763	Open in IMG/M
3300006797\|Ga0066659_11261332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	616	Open in IMG/M
3300006847\|Ga0075431_100437091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1306	Open in IMG/M
3300006854\|Ga0075425_100475696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1439	Open in IMG/M
3300006914\|Ga0075436_100983422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	633	Open in IMG/M
3300009100\|Ga0075418_12334481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	584	Open in IMG/M
3300009148\|Ga0105243_11699532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	660	Open in IMG/M
3300009792\|Ga0126374_10220078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1217	Open in IMG/M
3300009792\|Ga0126374_11020260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	650	Open in IMG/M
3300009792\|Ga0126374_11067525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	638	Open in IMG/M
3300010046\|Ga0126384_10830352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	829	Open in IMG/M
3300010047\|Ga0126382_10854591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	782	Open in IMG/M
3300010333\|Ga0134080_10603112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	534	Open in IMG/M
3300010335\|Ga0134063_10173763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1006	Open in IMG/M
3300010358\|Ga0126370_11921004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	576	Open in IMG/M
3300010359\|Ga0126376_10528366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1099	Open in IMG/M
3300010360\|Ga0126372_10585222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1067	Open in IMG/M
3300010360\|Ga0126372_10954432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	865	Open in IMG/M
3300010362\|Ga0126377_11659778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	714	Open in IMG/M
3300010362\|Ga0126377_12246565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	622	Open in IMG/M
3300010366\|Ga0126379_12935569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	571	Open in IMG/M
3300010375\|Ga0105239_11472780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	786	Open in IMG/M
3300010376\|Ga0126381_100874532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1293	Open in IMG/M
3300010376\|Ga0126381_101303087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1050	Open in IMG/M
3300010398\|Ga0126383_10502150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1272	Open in IMG/M
3300010398\|Ga0126383_13602514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	506	Open in IMG/M
3300010403\|Ga0134123_11596895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	700	Open in IMG/M
3300010868\|Ga0124844_1027682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1764	Open in IMG/M
3300012205\|Ga0137362_10078025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2756	Open in IMG/M
3300012208\|Ga0137376_11273188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	625	Open in IMG/M
3300012353\|Ga0137367_10639453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	743	Open in IMG/M
3300012917\|Ga0137395_10699512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	733	Open in IMG/M
3300012948\|Ga0126375_10330334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1072	Open in IMG/M
3300012971\|Ga0126369_10611751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1160	Open in IMG/M
3300012971\|Ga0126369_10939749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	951	Open in IMG/M
3300012987\|Ga0164307_11286235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	610	Open in IMG/M
3300014968\|Ga0157379_12194275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	548	Open in IMG/M
3300015371\|Ga0132258_11662031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1611	Open in IMG/M
3300015372\|Ga0132256_102335783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	638	Open in IMG/M
3300015373\|Ga0132257_100725998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1236	Open in IMG/M
3300015373\|Ga0132257_103105879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	605	Open in IMG/M
3300016294\|Ga0182041_11265132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	674	Open in IMG/M
3300016294\|Ga0182041_12101599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	527	Open in IMG/M
3300016319\|Ga0182033_11636809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	583	Open in IMG/M
3300016341\|Ga0182035_11653769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	578	Open in IMG/M
3300016357\|Ga0182032_11633729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	561	Open in IMG/M
3300016371\|Ga0182034_10332631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1228	Open in IMG/M
3300016387\|Ga0182040_10604592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	888	Open in IMG/M
3300016387\|Ga0182040_10670637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	845	Open in IMG/M
3300016387\|Ga0182040_10738380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	807	Open in IMG/M
3300016422\|Ga0182039_10807910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	833	Open in IMG/M
3300016422\|Ga0182039_11460935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	622	Open in IMG/M
3300020579\|Ga0210407_10388664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1092	Open in IMG/M
3300020581\|Ga0210399_11481812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	527	Open in IMG/M
3300021405\|Ga0210387_10464437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1124	Open in IMG/M
3300021560\|Ga0126371_10320151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1681	Open in IMG/M
3300021560\|Ga0126371_11493341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	804	Open in IMG/M
3300021560\|Ga0126371_12481363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	627	Open in IMG/M
3300025915\|Ga0207693_10067215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2806	Open in IMG/M
3300025929\|Ga0207664_11711574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	551	Open in IMG/M
3300026312\|Ga0209153_1142566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	901	Open in IMG/M
3300026371\|Ga0257179_1039043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	599	Open in IMG/M
3300026538\|Ga0209056_10333906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1012	Open in IMG/M
3300027371\|Ga0209418_1054796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	709	Open in IMG/M
3300027874\|Ga0209465_10174758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1070	Open in IMG/M
3300027907\|Ga0207428_11184450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	532	Open in IMG/M
3300031543\|Ga0318516_10118039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1510	Open in IMG/M
3300031543\|Ga0318516_10507155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	692	Open in IMG/M
3300031545\|Ga0318541_10117807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1439	Open in IMG/M
3300031545\|Ga0318541_10522098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	664	Open in IMG/M
3300031549\|Ga0318571_10290769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	612	Open in IMG/M
3300031561\|Ga0318528_10090205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1598	Open in IMG/M
3300031561\|Ga0318528_10712648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	537	Open in IMG/M
3300031564\|Ga0318573_10809788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	503	Open in IMG/M
3300031573\|Ga0310915_10284327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1167	Open in IMG/M
3300031719\|Ga0306917_10454405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1003	Open in IMG/M
3300031764\|Ga0318535_10214360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	861	Open in IMG/M
3300031771\|Ga0318546_10546950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	813	Open in IMG/M
3300031771\|Ga0318546_11260552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	519	Open in IMG/M
3300031778\|Ga0318498_10546767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	508	Open in IMG/M
3300031795\|Ga0318557_10393214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	637	Open in IMG/M
3300031796\|Ga0318576_10111298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1257	Open in IMG/M
3300031797\|Ga0318550_10460490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	614	Open in IMG/M
3300031799\|Ga0318565_10471237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	607	Open in IMG/M
3300031819\|Ga0318568_10917945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	541	Open in IMG/M
3300031835\|Ga0318517_10070871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1495	Open in IMG/M
3300031835\|Ga0318517_10480752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	560	Open in IMG/M
3300031859\|Ga0318527_10011066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2993	Open in IMG/M
3300031859\|Ga0318527_10113007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1122	Open in IMG/M
3300031894\|Ga0318522_10238501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	689	Open in IMG/M
3300031896\|Ga0318551_10067038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1850	Open in IMG/M
3300031897\|Ga0318520_10361429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	882	Open in IMG/M
3300031912\|Ga0306921_11621211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	702	Open in IMG/M
3300031941\|Ga0310912_10910734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	676	Open in IMG/M
3300031942\|Ga0310916_10596870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	938	Open in IMG/M
3300031945\|Ga0310913_10885308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	628	Open in IMG/M
3300031947\|Ga0310909_10722254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	827	Open in IMG/M
3300032001\|Ga0306922_10666169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1098	Open in IMG/M
3300032001\|Ga0306922_11505640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	672	Open in IMG/M
3300032044\|Ga0318558_10670428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300032060\|Ga0318505_10184400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	974	Open in IMG/M
3300032064\|Ga0318510_10166426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	877	Open in IMG/M
3300032066\|Ga0318514_10440511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	692	Open in IMG/M
3300032076\|Ga0306924_12187154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	564	Open in IMG/M
3300032180\|Ga0307471_104077197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	516	Open in IMG/M
3300033289\|Ga0310914_11133955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	683	Open in IMG/M
3300033290\|Ga0318519_10275527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	979	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.47%
Host-Associated	Host-Associated	10.53%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.47%
Plants	Host-Associated → Plants	10.53%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.47%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.52%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.01%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.68%
Loam	Environmental → Terrestrial → Soil → Loam	18.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.02%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.26%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.50%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.75%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	43.61%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.02%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.51%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.51%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.08%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	12.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.51%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.01%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.26%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.75%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026371	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-B	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03807970	2088090014	Soil	LGTWCVGDHPTDNEAYVGIARDQCGENEATLIIGENGYTWEREERLSCRYLSGKARFDNTIPASTKTVGVWVFHIIAGCIRTHEGTIRKYTHSFDMYVSKGTLWIENLRSDKKP
AF_2010_repII_A01DRAFT_10421742	3300000580	Forest Soil	KSQSWKLIQGTWCVGDHPTDNEAYVGIARDKCGDDEQTLIIGDNGYRWEHEDGLSCRYLSGKARFDNTIPASTKTVGVWVFHIIAGCIRTHEGAIRKYTHSFDMYVSKETLWIENLRRK*
JGI12627J18819_100420424	3300001867	Forest Soil	VADHPSDDGAYVGIARDECGENEATLTIGENGYTWERDEGLSCRYSSGKARFDNTIAASTKTVGVWVFHVVAACIRRPSEGVVRQYTHSFDMYVSKGTLWIENLRSDKNP*
Ga0066395_102731391	3300004633	Tropical Forest Soil	TLIIGENGYRWEREERVSCRYSSGKARFDNTIPASTKTVGVWVFHIVAGCIKKASEGAVRTCTHSFDMYVSKGTLWIKNLRSDKKP*
Ga0066388_1002094834	3300005332	Tropical Forest Soil	VGDHPSDNEAYVGIARDQCGENEATLVVGENGYRWEREEGLICRYSSGKARFDNAIPASTKRVGVWVFHIVAGCIRKPAEGAVRKSTQSFDMYVSKGTLWIETLRSDERP*
Ga0066388_1006688962	3300005332	Tropical Forest Soil	VGDHPSDNEAYVGIARDKCGENEETLIIRENGYRWEREDGLSCRYLSGKARIDNTIPASTKTVGVWVFHIIAGCIRRPAEGAIRKYTQSFDMYVSKGTLWIENLRSDEKP*
Ga0066388_1008092992	3300005332	Tropical Forest Soil	MLGTWCVGDQPSDNEAYFGIRRDKCGDDEQTLIIGENGYSWEHEARLRCQYSFGRARFDNTIAASTKTVGVWVFHIIAGCMRPAEGAIKKYTQSFDMYVSKGTLWIENLRSDKKPQHD*
Ga0066388_1012510883	3300005332	Tropical Forest Soil	VGDHPTDNEAYVGIVRDQCGENEATLIIGENGYTWEREERLSCRYLSGKARFDNTIPASTKTVGVWVFHIIAGCIRKPVGGAIKKYTHRFDMYVSKGTLWIEKLRSDEKP*
Ga0066388_1021748223	3300005332	Tropical Forest Soil	DNGAYAGIRKDKCGENEETLVIGENGYGWEHWEHEHELRCLYSSGKAHFDNNIGVWVFHINAGCVRRPGGAIYTQTFDMYVSKGALWIENLRSDKKP*
Ga0066388_1038319991	3300005332	Tropical Forest Soil	DKCGEDEQTLIIGENGYTWEYEDRLRSQYSSGKARFDNTIAASTKTVGVWVFHIIANCIRTPAEGAIKKYTQSFDMYVSQGTFWIENLRSDKKP*
Ga0066388_1087582921	3300005332	Tropical Forest Soil	DNEAYVGIVRDQCGENEATLIIGENGYTWEREEGLSCRYSSGKARFDNTIPASTKTAGVWVFHIVAGCITKPSEGAVREHTQSFDMYLSKGSLWIENLRSDAKP*
Ga0070659_1016776741	3300005366	Corn Rhizosphere	VADHPSDDGAYVGIARDECDENEATLTIGENGYTWERDEGLSCRYSSGKARFDNAIAASTKTVGVWVFHIVAACIRRPSEGVVRKYTHSFDMYVFKGTLWIENL
Ga0070713_1004803241	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	TWCVADHPSDDGAYVGIARDECGENEATLTIGENGYTWERDEGLSCRYSSGKARFDNAIAASTKTVGVWVFHIVAACIRKPSEGVVRKYTHSFDMYVSKGTLWIENLRSDKNP*
Ga0070708_1011319241	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VGIARDQCGENEATLIIGENGYTWEREERLSCRYLSGKARFDNTIPASTKTVGVWVFHIIAGCIRTHEGAIRKYTHSFDMYVSKGTLWIENLRSNEKS*
Ga0066687_108577021	3300005454	Soil	QCGENEATLVIGENGYTWQREEGLSCRYSSGKARFDNTIAASTKTVGVWVFHIVAGCIRKASEVAVRTYTHSFDMYVSKGTLWIENLRSDKKP*
Ga0066903_1005621712	3300005764	Tropical Forest Soil	VANQPSDNEAYVGIAKDQCGENAATLIIGENGYRWEREEGLSCRYSSGKARFDNTIAASTKTVGVWVFHIVASCMRKTAEDEVRNYTQSFDMYVSKGSLWIENLRSDEKP*
Ga0066903_1035990463	3300005764	Tropical Forest Soil	SKTESWKLTLGTWCVGDHPSDNEAYVGIARDQCGENEATLIIGENGYGWEREEGLSCRYSSGKARFDSTIPASTKTVGAWVFHIVAGCIRKPAQGAVRKYTQRFDMYVSKGSLWIENLRSDEKR*
Ga0066903_1039998291	3300005764	Tropical Forest Soil	TQSWKLILGTWCVGDQPSDNEAYVGIRRDKCGENEETLIIGESGYSWEHKDRLRCQYLSGRARFDNTIAASTKTVGVWVFHIIANCIRTPAEGAIKKYTQSFDMYVSEGTFWIENLRSDKKP*
Ga0066903_1047027872	3300005764	Tropical Forest Soil	VDDHPSDNEAYVGIAREKCGENEETLIIRENGYSWEHEEDGLRCQYSSGKARFDNTIPASTKTVGVWVFHIIADCIRRPAEGAIRKYTHSFDMYVSKGTLWIKNLRSDKKP*
Ga0066903_1058509632	3300005764	Tropical Forest Soil	GIARDQCGENEATLVVGENGYRWEREEGLICRYSSGKARFDNAIPASTKRVGVWVFHIVAGCIRKPAEGAVRKSTQSFDMYVSKGTLWIETLRSDERP*
Ga0066903_1068365691	3300005764	Tropical Forest Soil	QGTWCVGDQPSDNEAYVGIARDKCGENEETLIIRENGYRWEHEDGLSCRYLSGKARLDNTIPASTKTVGVWVFHIIAGCIRRPAEGAIGKYTQSFDMYVSKGALWIENLRSDEKP*
Ga0066903_1087366871	3300005764	Tropical Forest Soil	GTWCVADHPSDGAYVGIARDECGENEATLIIGENGYRWERGEGLSCRYSSGRARFDNTIAASTKTVGVWVFHIVAACIRQPSEGAVRRYTHTFDMYVSKGTLWLENLRSDKNP*
Ga0068858_1025783571	3300005842	Switchgrass Rhizosphere	VGDHPNDNEAYVGIARDQCGENEATLVIGENGYTWQREEGLSCRYSSGKARFDNTIAASTKTVGVWVFHIVAGCIRKASEGAVRTYTHSFDMYVSKGTLWIENLRSD
Ga0070717_107375383	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	TWCVADHPSDDGAYVGIARDECGENEATLTIGENGYTWERDEGLSCRYSSGKARFDNTIAASTKTVGVWVFHIVAACIRKPSEGVVRKYTHSFDMYVSKGTLWIENLRSDKNP*
Ga0066656_106749241	3300006034	Soil	VGIARDQCGENEATLVIGENGYTWQREEGLSCRYSSGKARFDNTIAASTKTVGVWVFHIVAGCIRKASEGAVRTYTHSFDMYVSKGTLWIENLRSDKKP*
Ga0070712_1009001162	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	SKTESWKLTLGTWCVGDDPSDNEAYVGIARDQCGENEATLIIGENGYTWEREQGLSCRYSSGKARFDNTIPASTKTVGVWVFQIVAGCIRKPAEGAVRKYTQRFDMYVSKGSLWIENLRSDEKP*
Ga0066659_112613322	3300006797	Soil	ARDKCGEDEKTLIIRENGYLWEREDGLSCRYLPGRARLDNTIAASTKTVGVWVFHIIAGCIRRPAEGAIRKYTQSFDMYVSKGTLWIENSRSDEKP*
Ga0075431_1004370913	3300006847	Populus Rhizosphere	LTLGTWCVADHPSDHGAYVGIARDECGENEATLTIGENGYTWERDEGLSCRYSSGKARFDNTIAASTKTVGVWVFHIVAACIRKPSEGVVRKYTHSFDMYVSKGTLWIENLRSDKNP*
Ga0075425_1004756962	3300006854	Populus Rhizosphere	VGDHPNDNEAYVGIARDQCGENEATLVIGENGYTWQREEGLSCRYSSGKARFDNTIAASTKTVGVWVFHIVAGCIRKASEGAVRTYTHSFDMYVSKGTLWIENLRSDKKP*
Ga0075436_1009834221	3300006914	Populus Rhizosphere	ESWKLPLGTWCVADHPSDDGAYVGIARDECGENEATLTIGENGYTWERDEGLSCRYSSGKARFDNTIAASTKTVGVWVFHIVAACIRKPSEGVVRKYTHSFDMYVSKGTLWIENLRSDKNP*
Ga0075418_123344811	3300009100	Populus Rhizosphere	GENEATLVIGENGYTWQREEGLSCRYSSGKARFDNTIAASTKTVGVWVFHIVAGCIRKASEGAVRTYTHSFDMYVSKGTLWIENLRSDKKP*
Ga0105243_116995321	3300009148	Miscanthus Rhizosphere	AYVGIARDECGENEATLTIGENGYTWERDEGLSCRYSSGKARFDNTIAASTKTVGVWVFHIVAACIRRPSEGVVRKYTHSFDMYVFKGTLWIENLRSDKKP*
Ga0126374_102200781	3300009792	Tropical Forest Soil	VGDHPTDNEAYVGIVRDQCGENEATLIIGENGYTWEREERLSCRYLSGKARFDNTIPASTKTVGVWVFHIIAGCIRKPVGGAIKKYTHSFDMYVSKGTLWIEKLRSDEKP*
Ga0126374_110202601	3300009792	Tropical Forest Soil	VGDHPSDNEAYSGIRSDKCGENEETLIIGENGYSWEHWEHEDELRCRYSSGKARFDNTIAASTKTVGVWVFHINAGCVRRPAEGAIKNYTQSFDMYVSKGALWIENLLRI
Ga0126374_110675251	3300009792	Tropical Forest Soil	VGDHPSDNEAYVGIARDKCGENEETLIIRENGYRWERENGLSCRYLSGKARIDNTIPASTKTVGVWVFHIIAGCIRRPAEGAIRKYTQSFDMYVSKGILWIENLRSDEKP*
Ga0126384_108303522	3300010046	Tropical Forest Soil	VGDHPSDNEAYSGIRRDKCGENEETLIIGENGYSWEHEDELRCRYSSGKARFDNTIAASTKTVGVWVFHINAACVRTPAEGATKNYTQSFDMYVSKGALWIENFRSDKKP*
Ga0126382_108545912	3300010047	Tropical Forest Soil	VGDHPTDNEAYVGIARDQCCYNEATLIIGENGYRWEREEGLSCRYSSGKARFDNTIPASTKTVGVWVFHIIAGCIRRPAEGAIRKYTQSFDMYVSKGTLWIETLRSDERP*
Ga0134080_106031121	3300010333	Grasslands Soil	VGDHPNDNEAYVGIARDQCGDNEATLVIGENGYTWQREEGLSCRYSSGKARFDNTIAASTKTVGVWVFHIVAGCIRKASEGAVRTYTHSFDMYVSKGTLWIENLRSDKKP*
Ga0134063_101737632	3300010335	Grasslands Soil	LTLGTWCVGDHPNDNEAYVGIARDECGENEATLVIGENGYTGLSCRYSSGKARFDPTIAASTKTVGVWVFHIVAACVRKPLEGVIRKYTHSFDMYVSKGTLWIENLRSDKKP*
Ga0126370_119210041	3300010358	Tropical Forest Soil	KLMLGTWCVGDHPSDNEAYSGMRRDKCGENEETLIIGENGYSWEHEDELRCRYSSGKARFDNTIAASTKTVGVWVFHINAGCVRRPAEGSIKNYTQSFDMYVSKGALWIENLRSDEKP*
Ga0126376_105283662	3300010359	Tropical Forest Soil	VGDHPSDNEAYSGIRRDKCGENEETLIIGENGYSWEHWEHEDELRCRYSSGNARFDNTIAVSTKTVGVWVFHINAGCVRRPAEGSIKNYTQSFDMYVSKGALWIENLRSDKKP*
Ga0126372_105852221	3300010360	Tropical Forest Soil	VGDHPSDNEAYSGIRGDKCGENEETLIIGENGYSWEHEDQLRCRYSSGKARFDNTIAASTKTVGVWVFHINAGCVRRPAEGSIKNYTQSFDMYVSKGALWIENLRSDEKP*
Ga0126372_109544321	3300010360	Tropical Forest Soil	VWVTTLAITEHMLEFVGSKCGEDELTLIIRENEYRWEREEGLSCRYSSGRARVDNTIPTSAKIGVWVFHIIASCIGRPAEGAIRKNTQSFDMYVSKGSLWIRKLAFG*
Ga0126377_116597781	3300010362	Tropical Forest Soil	VGDDPSDNEAYVGIARDQCGENEATLIIGENGYRWEREERVSCRYSSGKARFDNTIPASTKTVGVWVFHIIAGCIRTHEGAIRKYTHTFDMYL
Ga0126377_122465652	3300010362	Tropical Forest Soil	VGDHPSDNEAYVGIARDKCGENEETLIIRENGYRWERENGLSCRYLSGKARIDNTIPASTKTVGVWVFHIIAGCIRRPAEGAIRKYTQSFDMYVSKGTLWIENLRSDKKP*
Ga0126379_129355691	3300010366	Tropical Forest Soil	QCGENEVTLVIGENGYTWEREEGLSCRYSSGKARFDNTIAASTKTVGVWVFHIVAGCIKKASEGAVRTCTHSFDMYVSKGTLWIKNLRSDKKP*
Ga0105239_114727802	3300010375	Corn Rhizosphere	VADHPSDDGAYVGIARDECGENEATLTIGENGYTWERDEGLSCRYSSGKARFDNTIAASTKTVGVWVFHIVAACIRRPSEGVVRKYTHSFDMYVFKGTLWIENLRSDKKP*
Ga0126381_1008745322	3300010376	Tropical Forest Soil	MRRDKCGENEETLIIGENGYSWEHEDELRCRYSSGKARFDNTIAASTKTVGVWVFHINAGCVRRPAEGSIKNYTQSFDMYVSKGALWIENLRSDEKP*
Ga0126381_1013030871	3300010376	Tropical Forest Soil	HPNDNEAYVGIARDQCGENEATLVVGENGYRWEREEGLICRYSSGKARFDNAIPASTKRVGVWVFHIVAGCIRKPAEGAVRKSTQSFDMYVSKGTLWIETLRSDERP*
Ga0126383_105021502	3300010398	Tropical Forest Soil	GDDPSDNEAYVGIARDQCGENEATLVVGENGYRWEREEGLICRYSSGKARFDNAIPASTKRVGVWVFHIVAGCIRKPAEGAVRKSTQSFDMYVSKGTLWIETLRSDERP*
Ga0126383_136025141	3300010398	Tropical Forest Soil	KLTLGTWCVGNYPSDDEAYFGIARDQCGENEATLIIGENGYRWEREDGLSCRYLSGRARLDNTIAASTKTVGVWVFHIIAGCIRRPAEGAIRKYTQSFDMYVSKGTLWIENLRSDEKP*
Ga0134123_115968951	3300010403	Terrestrial Soil	VADHPSDDGAYVGIARDECGENEATLTIGENGYTWERDEGLSCRYSSGKARFDNTIAASTKTVGVWVFHIVAACIRRPSEGVVRKYTHSFDMYVFKGTLWIENLR
Ga0124844_10276822	3300010868	Tropical Forest Soil	MLGTWCVGDHPSDNEAYSGMRRDKCGENEETLIIGENGYSWEHEDELRCRYSSGKARFDNTMAASTKTVGVWVFRINAGCVRRPAEGSIKNYTQSFDMYVSKGALWIENLRSDEKP*
Ga0137362_100780253	3300012205	Vadose Zone Soil	VGDHPNDNEAYVGIARDQCGENEVTLVIGENGYTWEREEGLSCRYSSGKARFDNTIAASTKTVGVWVFHIVAGCIRKASEGAVRTYTHSFDMYVSKGTLWIENLRSDKKP*
Ga0137376_112731881	3300012208	Vadose Zone Soil	VGDQPSDNEAYVGIARDKCGEDEKTLIIRENGYLWEREDGLSCRYLSGRARLDNTIAASTKTVGVWVFHIIAGCIRRPAEGAIRKYTQSFDMYVSKGTLWIENLRSDEKP*
Ga0137367_106394531	3300012353	Vadose Zone Soil	YVGIARDKCGEDENTLIIRENGYLWEHEDGLSCRYLSGRARLDNTIAASTKTVGVWVFHIIAGCIRRPAEGAIRKYTQSFDMYVSKGTLWIENLRSDEKP*
Ga0137395_106995122	3300012917	Vadose Zone Soil	SWKLTLGTWCVGDHPNDHEAYVGIARDQCGENEVTLVIGENGYTWEREEGLSCRYSSGKARFDNTIAASTKTVGVWVFHIVAGCIRKASEGAVRTYTHSFDMYVSKGTLWIENLRSDKKP
Ga0126375_103303342	3300012948	Tropical Forest Soil	MLGTWCVGDHPSDNEAYSGLRRDKCGENEETLIIEENGYSWEHEDRLRCQYSSGRARFDNTIAASTKTVGVWVFHIIAGCIRRSTEGVINNYTQSFNMYVSKGALWIEKLRSDKKP*
Ga0126369_106117512	3300012971	Tropical Forest Soil	VGDHPGDTEAYSGIRRDKCGENEETLIIGENGYSWEHEDELRCRYSSGKARFDNTIAASTKTVGVWVFHINAGCVRRPAEGSIKNYTQSFDMYVSKGALWIENLRSDEKP*
Ga0126369_109397492	3300012971	Tropical Forest Soil	DNEAYVGIARDQCNEIETTLIIGENGYTWEREERLSCRYSSGKARFDNTIPASTKTVGVWVFHIVAGCIGKPSEGAVRKYTQSFDMYVSKGTLWIENLRSDKKP*
Ga0164307_112862351	3300012987	Soil	VADHPSDDGAYVGIARDECDENEATLTIGENGYTWERDEGLSCRYSSGKARFDNTIAASTKTVGVWVFHIVAGCIRKPSEGAVRKYTHS
Ga0157379_121942751	3300014968	Switchgrass Rhizosphere	VADHPSDDGAYVGIARDECDENEATLTIGENGYTWERDEGLSCRYSSGKARFDNTIAASTRTVGVWVFHIVAGCIRKASEGAVRTYTHSFDMYVSKGTLWIENLRSDKNP*
Ga0132258_116620312	3300015371	Arabidopsis Rhizosphere	VADHPSDDGAYVGIARDECGENEATLTIGENGYTWERDEGLSCRYSSGKARFDNTIAASTKTVGVWVFHIVAACIRKPSEGVVRKYTHSFDMYVSKGTLWIENLRSDKNP*
Ga0132256_1023357832	3300015372	Arabidopsis Rhizosphere	VGNHPSDNEAYVGIARDQCGENDATLIIGENGYRWEREEGLSCLYSSGKARFDGAIPASTKTVGVWVFHIVAGCIRKQPAEGAVRKSTQSFDMYVSKGSLWIENLRSDERP*
Ga0132257_1007259982	3300015373	Arabidopsis Rhizosphere	VGNYPTDNKAYIGIATEECGEDEVTLIVGENGYTWERGEGLSCRYSSGRARFDNTIPASTKAVGVWVFHIVASCTKKSAEGAVRKYTQSFDMYVSKGSLWIRKLAFG*
Ga0132257_1031058791	3300015373	Arabidopsis Rhizosphere	VGNHPSDNEAYVGIARDQCGENDATLIIGENGYTWEREEGLSCRYSSGKARFDNTIPASTKTVGVWVFHIVAACIRRPSEGVVRKYTHSFDMYVFKGT
Ga0182041_112651321	3300016294	Soil	QSWKLILGTWCVGDHPSDNGAYVGIARDQCGENEETLIIGDNGYRWEREEGLSCRYSSGKARFDNTIPASTKTLGVWVFHIIADCIRRPAEGAIKNYTQSFDMYVSKGSLWIENLRSGEK
Ga0182041_121015991	3300016294	Soil	CGENEETLIIGENGYRWEREDGLSCRYLSGKARIDNTIPASTKTVGVWVFHIIAGCIRRPAEGAIRKYTQSFDMYVSKGTLWIENLRSDEKP
Ga0182033_116368091	3300016319	Soil	DNEAYVGIVRDQCGENEATLIIGENGYTWEREEGLSCRYLSGKARFDNTIPASTKTVGVWVFHIIAGCIRKPVGGAIKKYTHRFDMYVSKGTLWIEKLRSDEKP
Ga0182035_116537692	3300016341	Soil	AYVGIARDQCGENEETLIIGENGYRWEREEGLSCRYSSGKARFDNTIPASTKTVGVWVFHIIAGCMRRAEGAIRKYRHSFDMYVSKGALWIENLRSDEKP
Ga0182032_116337292	3300016357	Soil	TQSWKLILGTWCVGDHPSDNGAYVGIARDQCGENEETLIIGENGYRWEREEGLSCRYSSGRARFDNTIPASTKTVSVWVFHIVAGCIRRRAEGAIGKYTQSFDMYVSKGTLWIESLRSDEKP
Ga0182034_103326311	3300016371	Soil	VGDHPTDNEAYVGIVRDQCGENEATLIIGENGYTWEREEGLSCRYLSGKARFDNTIPASTKTVGVWVFHIIAGCIRKPVGGAIKKYTHRFDMYVSKSLSENIRRDYKVFGA
Ga0182040_106045922	3300016387	Soil	ILGTWCVGDHPSDNGAYVGIARDQCGENEETLIIGDNVYRWEREEGLSCRYSSGKARFDNTIPASTKTLGVWVFHIIADCIRRPAEGAIKNYTQSFDMYVSKGSLWIENLRSGEKP
Ga0182040_106706373	3300016387	Soil	EAYVGIVRDQCGENEATLIIGENGYTWEREEGLSCRYLSGKARFDNTIPASTKTVGVWVFHIIAGCIRKPVGGAIKKYTHRFDMYVSKGTLWIEKLRSDEKP
Ga0182040_107383801	3300016387	Soil	DKCDENEQTLIIRENGYRWEHEDGLSCRYSSGKARFDKTIPASTKTVGVWVFRMIAGCIRTPAEGAISKYTQSFDMYVSKGTLWIENLRSDEKP
Ga0182039_108079102	3300016422	Soil	VGDHPTDNEAYVGIVRDQCGENEATLIIGENGYTWEREEGLSCRFLSGKARFDNTIPASTKTVGVWVFHIIAGCIRKPVGGAIKKYTHRFDMYVSKGTLWIEKLRSDEKP
Ga0182039_114609352	3300016422	Soil	MRREKCGENEETLIIGENGYSWEHEDELRCRYSSGKARFDNTIAASTKTVGVWVFHINAGCVRRPAEGSIKNYTQSFDMYVSKGALWIENLRSDEKP
Ga0210407_103886641	3300020579	Soil	DHPSDDGAFVGIARDECGENEATLIIGENGYTWERDEGLSCRYSSGKARFDNAIAASTKTVGVWVFHIVAACIRKPSEGVVRKYTHSFDMYVSKGTLWIENLRSDKNPRKPNTSTP
Ga0210399_114818122	3300020581	Soil	TWCVGDHPSDNEAFVGIARDQCGENEATLIIGENGYTWEREKGLSCRYSSGKARFDNTIPASTKTVGAWVFHIVAGCITKPSEGAGRKSTQSFDMYVSKGTLWIENLRSDKKP
Ga0210387_104644372	3300021405	Soil	ECGENEATLIIGENGYTWERDEGLSCRYSSGKARFDNAIAASTKTVGVWVFHIVAACIRKPSEGVVRKYTHSFDMYVSKGTLWIENLRSDKNPRKPNTSTP
Ga0126371_103201512	3300021560	Tropical Forest Soil	MLGTWCVGDHPSDNEAYSGMRRDKCGENEETLIIGENGYSWEHEDELRCRYSSGKARFDNTIAASTKTVGVWVFHINAGCVRRPAEGSIKNYTQSFDMYVSKGALWIENLRSDEKP
Ga0126371_114933411	3300021560	Tropical Forest Soil	VGDHPSDNGAYAGIRRDKCGENELTLIIRETEYRWEREEGLSCRYLSGRARVDNTIPTSTKIGVWVFHIIASCIRRPAEGAIRKNTQSFDMYVSKGSLWIRKLAFG
Ga0126371_124813632	3300021560	Tropical Forest Soil	TLGTWCVGDHPSDNEAYVGIARDQCGENEATLVVGENGYRREREEGLICRYSSGKARFDNAIPASTKRVGVWVFHIVAGCIRKPAEGAVRKSTQSFDMYVSKGTLWIETLRSDERP
Ga0207693_100672155	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VGIARDQCGENEATLVIGENGYTWQREEGLSCRYSSGKARFDNTIAASTKTVGVWVFHIVAGCIRKASEGAVRTYTHSFDMYVSKGTLWIENLRSDKKP
Ga0207664_117115741	3300025929	Agricultural Soil	ECSENEATLSIGENGYTWEREEGLSCRYSSGKARFDNTIAASTRTVGVWVFHIVAACIRKHSEGAVRKYTHSFDMYVSKGTFVDRKLAFG
Ga0209153_11425662	3300026312	Soil	GIRRDKCGEDEQTLIIGENGYSWEHEDRLRCQYSSGRARFDNTIAASTKTVGVWVFHIIANCIRRPAEGAIKKSTQSFDMYVSKGTLWIENLRSDKKP
Ga0257179_10390432	3300026371	Soil	QSWKLILGTWCVGDHPSDNKAYSGIRRDKCGENEETLIIGENGYSWEHEDELRCRYSSGKARFDNTIAASTKTVGVWVFHIDAGCVRGPAEGAINNYTQSFDMYVSKGALWIENLRSDKK
Ga0209056_103339062	3300026538	Soil	VGDHPNDNEAYVGIARDQCGENEATLVIGENGYTWQREEGLSCRYSSGKARFDNTIAASTKTVGVWVFHIVAGCIRKASEGAVRTYTHSFDMYVSKGTLWIENLRSDKKP
Ga0209418_10547961	3300027371	Forest Soil	HPSDDGAYVGIARDECGENEATLTIGENGYTWERDEGLSCRYSSGKARFDNTIAASTKTVGVWVFHVVAACIRRPSEGVVRQYTHSFDMYVSKGTLWIENLRSDKNP
Ga0209465_101747581	3300027874	Tropical Forest Soil	MLGTWCVGDHPSANEAYSGMRRDKCGENEETLIIGENGYSWEHEDELRCRYSSGKARFDNTIAASTKTVGVWVFHINAGCVRRPAEGSITNYTQSFDMYVSKGALWIENLRSDEKP
Ga0207428_111844501	3300027907	Populus Rhizosphere	TWCVADHPSDDGAYVGIARDECGENEATLTIGENGYTWERDEGLSCRYSSGKARFDNTIAASTKTVGVWVFHIVAACIRKPSEGVVRKYTHSFDMYVSKGTLWIENLRSDKNP
Ga0318516_101180393	3300031543	Soil	MLGTWCVGDHPSDNEAYSGMRREKCGENEETLIIGENGYSWEHEDELRCRYSSGKARFDNTIAASTKTVGVWVFHINAGCVRRPAEGSIKNYTQSFDMYVSKGALWIENLRSDEKP
Ga0318516_105071551	3300031543	Soil	VGDHPTDNEAYVGIVRDQCGENEATLIIGENGYTWEREEGLSCRYLSGKARFDNTIPASTKTVGVWVFHIIAGCIRKPVGGAIKKYTHRFDMYVSKGTLWIEKLRSDEK
Ga0318541_101178071	3300031545	Soil	MLGTWCVGDHPSDNEAYSGLRRDKCGENEETLIIGENGYSWEHEDELRCRYSSGKARFDNTIAASTKTVGVWVFHINAGCVRRPAEGSIKNYTQSFDMYVSKGALWIENLRSDEKP
Ga0318541_105220981	3300031545	Soil	GDHPSDNEAYVGIARDQCGENEETLIIGENGYRWEREEGLSCRYSSGKARFDNTIPASTKTVGVWVFHIIAGCMRRAEGAIRKYRHSFDMYVSKGALWIENLRSDEKP
Ga0318571_102907691	3300031549	Soil	DNEAYVGIARDQCGENEETLIIGENGYRWEREEGLSCRYSSGKARFDNTIPASTKTVGVWVFHIVAGCIRRRAEGAIGKYMQSFDMYVSKGMLWIENLRSDEKP
Ga0318528_100902052	3300031561	Soil	MLGTWCVGDHPSDNEAYSGMRREKCGENEETLIIGENGYSWEHEDELRCRYSSGKARFDNTIAASTKTVGVWVFHINAGCVRRPAEGSIKNYTQSFDMYVSKGALWIENLRSDEKA
Ga0318528_107126481	3300031561	Soil	WKLTLGTWCVGDHPTDNEAYVGIVRDQCGENEATLIIGENGYTWEREEGLSCRYLSGKARFDNTIPASTKTVGVWVFHIIAGCIRKPVGGAIKKYTHRFDMYVSKGTLWIEKLRSDEKP
Ga0318573_108097881	3300031564	Soil	TDNEAYVGIVRDQCGENEATLIIGENGYTWEREEGLSCRYLSGKARFDNTIPASTKTVGVWVFHIIAGCIRKPVGGAIKKYTHRFDMYVSKGTLWIEKLRSDEKP
Ga0310915_102843271	3300031573	Soil	VGDHPTDNEAYVGIVRDQCGENEATLIIGENGYTWEREEGLSCRYLSGKARFDNTIPASTKTVGVWVFHIIAGCIRKPVGGAIKKYTHRFDMYVSKGTLWIEKLRSDEKP
Ga0306917_104544053	3300031719	Soil	NEETLIIGENGYSWEHEDGLRCQYSSGKARFDNTIPASTKTVGVWVFHIIAGCMRRAEGAIRKYRHSFDMYVSKGALWIENLRSDEKP
Ga0318535_102143601	3300031764	Soil	VGDHPSDKGAYVGIARDQCGENEETLIIGENGYRWEREEGLSCRYSSGKARFDNTIPASTKTVGVWVFHIVAGCIRRRAEGAIGKYMQSFDMYVSK
Ga0318546_105469501	3300031771	Soil	KLILGTWCVGDHPSDNEAYVGIARDQCGENEETLIIGENGYRWEREEGLSCRYSSGKARFDNTIPASTKTVGVWVFHIIAGCMRRAEGAIRKYRHSFDMYVSKGALWIENLRSDEKP
Ga0318546_112605521	3300031771	Soil	AYAGIARDKCDENEQTLIIRENGYRWEREDGLRCQYSSGRARFDNAIPASTKTVGVWVFHIIAGCIRRPAESAIVKYTQSFDMYVSKGTLWIENLRSDKKP
Ga0318498_105467671	3300031778	Soil	GTWCVGDHPSDNEAYSGMRREKCGENEETLIIGENGYSWEHEDELRCRYSSGKARFDNTIAASTKTVGVWVFHINAGCVRRPAEGSIKNYTQSFDMYVSKGALWIENLRSDEKA
Ga0318557_103932141	3300031795	Soil	VGDHPSDNEAYSGIRRDKCGENEETLIIGENGYSWEHEDELRCRYSSGKARFDNTIAASTKTVGVWVFHINAGCVRRPAEGSIKNYTQSFDMYVSKGALWIENLRSDEKP
Ga0318576_101112981	3300031796	Soil	MLGTWCVGDHPSDNEAYSGLRRDKCGENEETLIIGENGYSWEHEDELRCRYSSGKARFDNTIAASTKTVGVWVFHINAGCVRRPAEGSIKNYTQSFDMYVSKGALWIENLRSDEKA
Ga0318550_104604901	3300031797	Soil	CGENEETLIIGENGYRWEREEGLSCRYSSGKARFDNTIPASTKTVGVWVFHIIAGCMRRAEGAIRKYRHSFDMYVSKGALWIENLRSDEKP
Ga0318565_104712372	3300031799	Soil	CVGDHPSDKGAYVGIARDQCGENEETLIIGENGYRWEREEGLSCRYSSGKARFDNTIPASTKTVGVWVFHIVAGCIRRRAEGAIGKYTQSFDMYVSKGMLWIENLRSDEKP
Ga0318568_109179451	3300031819	Soil	ARDQCGENEETLIIGENGYRWEREEGLSCRYSSGKARFDNTIPASTKTVGVWVFHIIAGCMRRAEGAIRKYRHSFDMYVSKGALWIENLRSDEKP
Ga0318517_100708712	3300031835	Soil	MLGTWCVGDHPSDNEAYSGIRRDKCGENEETLIIGENGYSWEHEDELRCRYSSGKARFDNTIAASTKTVGVWVFHINAGCVRRPAEGSIKNYTQSFDMYVSKGALWIENLRSDEKP
Ga0318517_104807521	3300031835	Soil	NEQTLIIRENGYRWEREDGLRCQYSSGKARFDNTIPASTKIVGVWVFHIIAGCIRRPAESAIVKYTQSFDMYVSKGTLRIKNLRSDKKP
Ga0318527_100110664	3300031859	Soil	HPSDKGAYVGIARDQCGENEETLIIGENGYRWEREEGLSCRYSSGKARFDNTIPASTKTVGVWVFHIVAGCIRRRAEGAIGKYTQSFDMYVSKGMLWIENLRSDEKP
Ga0318527_100549374	3300031859	Soil	MLGTWCVGDHPSDNEAYSGMRREKCGENEETLIIGENGYSWEHEDELRCRYSSGKARFDNTIAASTKTVGVWVFHINAGCVRRPAEGSIKNYTQSFDM
Ga0318527_101130073	3300031859	Soil	GTWCVGDHPSDNEAYVGIARDQCGENEETLIIGENGYRWEREEGLSCRYSSGKARFDNTIPASTKTVGVWVFHIIAGCMRRAEGAIRKYRHSFDMYVSKGALWIENLRSDEKP
Ga0318522_102385011	3300031894	Soil	MLGTWCVGDHPSDNEAYSGMRREKCGENEETLIIGENGYSWEHEDELRCRYSSGKARFDNTIAASTKIVGVWVFHIIAGCIRRTAEGAIKNYTQSFDMYVSKGALWIENLRSDEKP
Ga0318551_100670383	3300031896	Soil	LSKTQSWKLLGTWCVGDHPSDKGAYVGIARDQCGENEETLIIGENGYRWEREEGLSCRYSSGKARFDNTIPASTKTVGVWVFHIVAGCIRRRAEGAIGKYTQSFDMYVSKGMLWIENLRSDEKP
Ga0318520_103614292	3300031897	Soil	MLGTWCVGDHPSDNEAYSGLRRDKCGENEETLIIGENGYSWEHEDELRCRYSSGKARFDNTIAASTKTVGVWVFHINAGCVRRPAEGSIKNYTQSFDMYVSKGALWIENLRSEG
Ga0306921_116212112	3300031912	Soil	KCGENEETLIIGENGYSWEHEDELRCRYSSGKARFDNTIAASTKTVGVWVFHINAGCVRRPAEGSIKNYTQSFDMYVSKGALWIENLRSDEKP
Ga0310912_109107341	3300031941	Soil	VGDHPSDNEAYSGLRRDKCGENEETLIIGENGYSWEHEDELRCRYSSGKARFDNTIAASTKTVGVWVFHINAGCVRRPAEGSIKNYTQSFDMYVSKGALWIENLRSDEKP
Ga0310916_105968702	3300031942	Soil	QGTWCLADPPSDNEAYVGIARDKCDENEQTLIIRENGYRWEREDGLRCQYSSGKARFDNTIPASTKIVGVWVFHIIAGCIRRPAESAIVKYTQSFDMYVSKGTLRIKNLRSDKKP
Ga0310913_108853082	3300031945	Soil	PPSDNEAYAGIARDKCDENEQTLIIRENGYRWEREDGLRCQYSSGRARFDNAIPASTKTVGVWVFHIIAGCIRRPAESAIVKYTQSFDMYVSKGTLWIENLRSDKKP
Ga0310909_107222541	3300031947	Soil	GINVVRNEETLIIGENGYSWEHEDELRCRYSSGKARFDNTIAASTKTVGVWVFHINAGCVRRPAEAAIKNYTQSFDMYVSKGALWIENLRSDKKP
Ga0306922_106661692	3300032001	Soil	VGDHPTDNEAYVGIARDKCGDDEQTLIIGDNGYRWEHEDGLSCRYLSGKARFDNTIPASTKTVGVWVFHIIAGCIRTHEGAIRKYTHSFDMYVSKATLWIENLRRK
Ga0306922_115056401	3300032001	Soil	VGIARDKCDENEQTLIIRENGYRWEREDGLRCQYSSGKARFDNTIPASTKIVGVWVFHIIAGCIRRPAESAIVKYTQSFDMYVSKGTLRIKNLRSDKKP
Ga0318558_106704281	3300032044	Soil	SGMRREKCGENEETLIIGENGYSWEHEDELRCRYSSGKARFDNTIAASTKTVGVWVFHINAGCVRRPAEGSIKNYTQSFDMYVSKGALWIENLRSDEKP
Ga0318505_101844003	3300032060	Soil	NEAYVGIARDQCGENEETLIIGENGYRWEREEGLSCRYSSGKARFDNTIPASTKTVGVWVFHIIAGCMRRAEGAIRKYRHSFDMYVSKGALWIENLRSDEKP
Ga0318510_101664261	3300032064	Soil	MLGTWCVGDHPSDNEAYSGMRREKCGENEETLIIGENGYSWEHEDELRCRYSSGKARFDNTIAASTKTVGVWVFHINAGCVRRPAEGSIKNYTQSFDMYVS
Ga0318514_104405111	3300032066	Soil	EKCGENEETLIIGENGYSWEHEDELRCRYSSGKARFDNTIAASTKTVGVWVFHINAGCVRRPAEGSIKNYTQSFDMYVSKGALWIENLRSDEKP
Ga0306924_121871541	3300032076	Soil	IAKDQCGENEETLIIGENGYRWEREEGLSCRYSSGKARFDNTIPASTKTVGVWVFHIVAGCIRRRAEGAIEKYRQSFDMYISKGTLWIENLRSDEKP
Ga0307471_1040771972	3300032180	Hardwood Forest Soil	VGDDPSDNEAYVGIARDQCGENEATLIIGENGYRWEEREEVLSCRYSSGKARFDNTIPASTKTVGVWVFHIVAGCITKPSEGAVRKSTQSFDMYVSKGTLWIENLRSDKKP
Ga0310914_111339551	3300033289	Soil	ARDKCGENEETLIIRENGYRWEREDGLSCRYLSGKARIDNTIPASTKTVGVWVFHIIAGCIRRPAEGAIRKYTQSFDMYVSKGTLWIENLRSDEKP
Ga0318519_102755272	3300033290	Soil	MLGTWCVGDHPSDNEAYSGLRREKCGENEETLIIGENGYSWEHEDELRCRYSSGKARFDNTIAASTKTVGVWVFHINAGCVRRPAEGSIKNYTQSFDMYVSKGALWIENLRSDEKP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F060205

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences