Metagenome / Metatranscriptome Family F060208

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060208
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	41 residues
Representative Sequence	MEMNAQATKLQAAENDLKQLMADVTRAMEKAQEAVARIAS
Number of Associated Samples	99
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	91.73 %
% of genes near scaffold ends (potentially truncated)	92.48 %
% of genes from short scaffolds (< 2000 bps)	92.48 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (54.887 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (34.587 % of family members)
Environment Ontology (ENVO)	Unclassified (50.376 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.617 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.88% β-sheet: 0.00% Coil/Unstructured: 44.12%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF04392	ABC_sub_bind	9.02
PF03401	TctC	2.26
PF13545	HTH_Crp_2	0.75
PF13191	AAA_16	0.75
PF05711	TylF	0.75
PF07995	GSDH	0.75
PF00857	Isochorismatase	0.75
PF01494	FAD_binding_3	0.75
PF00296	Bac_luciferase	0.75
PF12710	HAD	0.75
PF02796	HTH_7	0.75
PF00034	Cytochrom_C	0.75
PF00536	SAM_1	0.75
PF00691	OmpA	0.75
PF00326	Peptidase_S9	0.75
PF00067	p450	0.75
PF02653	BPD_transp_2	0.75
PF00512	HisKA	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	9.02
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	2.26
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.50
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.75
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.75
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.75
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.75
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.75
COG2124	Cytochrome P450	Defense mechanisms [V]	0.75
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	0.75
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.89 %
Unclassified	root	N/A	45.11 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.89 %
Unclassified	root	N/A	45.11 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.89 %
Unclassified	root	N/A	45.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.11 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	40.60 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.11 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	35.34 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.50 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.11 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12.03 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	9.77 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.75 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.75 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.11 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.77 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.51 %
Reyranellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae	1.50 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.75 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.75 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.75 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.75 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.11 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.77 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.01 %
Reyranella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella	1.50 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.75 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.75 %
Nitrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	0.75 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.75 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.75 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.75 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.11 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.77 %
Reyranella soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → Reyranella soli	1.50 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.75 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.75 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.75 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.75 %
Nitrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	0.75 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.75 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.75 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.11 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.77 %
Reyranella soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → Reyranella soli	1.50 %
unclassified Mycobacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium	0.75 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.75 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.75 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.75 %
Nitrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	0.75 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.75 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.75 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.11 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.77 %
Reyranella soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → Reyranella soli	1.50 %
Mycobacterium sp. AZCC_0083	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. AZCC_0083	0.75 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.75 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.75 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.75 %
Nitrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	0.75 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.75 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.75 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000837\|AP72_2010_repI_A100DRAFT_1003278	All Organisms → cellular organisms → Bacteria → Proteobacteria	2284	Open in IMG/M
3300000858\|JGI10213J12805_10184238	Not Available	709	Open in IMG/M
3300000955\|JGI1027J12803_106048571	All Organisms → cellular organisms → Bacteria → Proteobacteria	1196	Open in IMG/M
3300000955\|JGI1027J12803_109402812	Not Available	537	Open in IMG/M
3300001867\|JGI12627J18819_10088151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1285	Open in IMG/M
3300003911\|JGI25405J52794_10113614	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300004479\|Ga0062595_100222145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1194	Open in IMG/M
3300005166\|Ga0066674_10509619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → Reyranella soli	541	Open in IMG/M
3300005174\|Ga0066680_10456385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → Reyranella soli	807	Open in IMG/M
3300005332\|Ga0066388_104047662	Not Available	747	Open in IMG/M
3300005332\|Ga0066388_104479755	Not Available	711	Open in IMG/M
3300005332\|Ga0066388_106202132	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300005332\|Ga0066388_107935028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	531	Open in IMG/M
3300005364\|Ga0070673_101548905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	626	Open in IMG/M
3300005434\|Ga0070709_11791650	Not Available	502	Open in IMG/M
3300005564\|Ga0070664_101151097	Not Available	731	Open in IMG/M
3300005617\|Ga0068859_103068328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	510	Open in IMG/M
3300005713\|Ga0066905_101104797	Not Available	704	Open in IMG/M
3300005713\|Ga0066905_101281812	Not Available	658	Open in IMG/M
3300005713\|Ga0066905_101551918	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300005713\|Ga0066905_101604424	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300005718\|Ga0068866_11038937	Not Available	584	Open in IMG/M
3300005764\|Ga0066903_100545066	All Organisms → cellular organisms → Bacteria → Proteobacteria	1986	Open in IMG/M
3300005764\|Ga0066903_101917278	Not Available	1135	Open in IMG/M
3300005764\|Ga0066903_101972238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1120	Open in IMG/M
3300005764\|Ga0066903_106323237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	618	Open in IMG/M
3300005764\|Ga0066903_107797762	Not Available	550	Open in IMG/M
3300005764\|Ga0066903_108075147	Not Available	539	Open in IMG/M
3300005840\|Ga0068870_10619412	Not Available	738	Open in IMG/M
3300006028\|Ga0070717_11984102	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300006175\|Ga0070712_100818257	Not Available	800	Open in IMG/M
3300006852\|Ga0075433_11119251	Not Available	684	Open in IMG/M
3300007788\|Ga0099795_10462717	Not Available	586	Open in IMG/M
3300010046\|Ga0126384_11194339	Not Available	701	Open in IMG/M
3300010361\|Ga0126378_10022429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	5488	Open in IMG/M
3300010366\|Ga0126379_13446608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	530	Open in IMG/M
3300010376\|Ga0126381_102056646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	823	Open in IMG/M
3300010396\|Ga0134126_12990778	Not Available	511	Open in IMG/M
3300010398\|Ga0126383_12096971	Not Available	652	Open in IMG/M
3300012211\|Ga0137377_10447644	All Organisms → cellular organisms → Bacteria	1230	Open in IMG/M
3300012212\|Ga0150985_113625339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1088	Open in IMG/M
3300012212\|Ga0150985_118374042	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300012355\|Ga0137369_10856253	Not Available	615	Open in IMG/M
3300012955\|Ga0164298_10806097	Not Available	672	Open in IMG/M
3300012957\|Ga0164303_10002452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	5365	Open in IMG/M
3300012988\|Ga0164306_11888421	Not Available	519	Open in IMG/M
3300013297\|Ga0157378_11907806	Not Available	643	Open in IMG/M
3300013297\|Ga0157378_11930093	Not Available	640	Open in IMG/M
3300015371\|Ga0132258_12989850	Not Available	1172	Open in IMG/M
3300016270\|Ga0182036_10048097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2663	Open in IMG/M
3300016270\|Ga0182036_11507663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	565	Open in IMG/M
3300016294\|Ga0182041_10174104	Not Available	1687	Open in IMG/M
3300016294\|Ga0182041_12314545	Not Available	503	Open in IMG/M
3300016319\|Ga0182033_10403112	Not Available	1156	Open in IMG/M
3300016319\|Ga0182033_12066276	Not Available	519	Open in IMG/M
3300016341\|Ga0182035_10933475	Not Available	767	Open in IMG/M
3300016341\|Ga0182035_11508991	All Organisms → cellular organisms → Bacteria → Proteobacteria	605	Open in IMG/M
3300016357\|Ga0182032_10157478	Not Available	1687	Open in IMG/M
3300016357\|Ga0182032_10303116	All Organisms → cellular organisms → Bacteria	1262	Open in IMG/M
3300016357\|Ga0182032_10835665	Not Available	780	Open in IMG/M
3300016371\|Ga0182034_12036824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	507	Open in IMG/M
3300016387\|Ga0182040_11893976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	511	Open in IMG/M
3300016404\|Ga0182037_10468945	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300016404\|Ga0182037_11668464	Not Available	568	Open in IMG/M
3300016422\|Ga0182039_10975130	Not Available	759	Open in IMG/M
3300018081\|Ga0184625_10658929	Not Available	506	Open in IMG/M
3300018085\|Ga0187772_11414257	Not Available	516	Open in IMG/M
3300018469\|Ga0190270_10276423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1480	Open in IMG/M
3300018920\|Ga0190273_10799310	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300021168\|Ga0210406_10548345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	909	Open in IMG/M
3300021478\|Ga0210402_11499261	Not Available	602	Open in IMG/M
3300025910\|Ga0207684_10038613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4052	Open in IMG/M
3300025915\|Ga0207693_10885657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	685	Open in IMG/M
3300025919\|Ga0207657_11456301	Not Available	513	Open in IMG/M
3300025938\|Ga0207704_10339551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1165	Open in IMG/M
3300027181\|Ga0208997_1025682	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300027669\|Ga0208981_1136599	All Organisms → cellular organisms → Bacteria → Proteobacteria	624	Open in IMG/M
3300027907\|Ga0207428_10999594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	588	Open in IMG/M
3300028712\|Ga0307285_10044010	Not Available	1101	Open in IMG/M
3300028875\|Ga0307289_10089265	Not Available	1253	Open in IMG/M
3300030916\|Ga0075386_11037320	Not Available	519	Open in IMG/M
3300031543\|Ga0318516_10184772	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
3300031546\|Ga0318538_10111798	All Organisms → cellular organisms → Bacteria	1420	Open in IMG/M
3300031572\|Ga0318515_10055577	All Organisms → cellular organisms → Bacteria	2002	Open in IMG/M
3300031572\|Ga0318515_10610411	Not Available	579	Open in IMG/M
3300031573\|Ga0310915_10034824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3169	Open in IMG/M
3300031573\|Ga0310915_10770478	Not Available	677	Open in IMG/M
3300031668\|Ga0318542_10399201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	710	Open in IMG/M
3300031668\|Ga0318542_10688171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. AZCC_0083	534	Open in IMG/M
3300031682\|Ga0318560_10821599	Not Available	502	Open in IMG/M
3300031719\|Ga0306917_10167860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1641	Open in IMG/M
3300031724\|Ga0318500_10372641	Not Available	707	Open in IMG/M
3300031736\|Ga0318501_10442225	Not Available	705	Open in IMG/M
3300031751\|Ga0318494_10412050	Not Available	784	Open in IMG/M
3300031765\|Ga0318554_10707440	Not Available	565	Open in IMG/M
3300031769\|Ga0318526_10163378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	907	Open in IMG/M
3300031771\|Ga0318546_10865166	Not Available	636	Open in IMG/M
3300031777\|Ga0318543_10236268	Not Available	814	Open in IMG/M
3300031777\|Ga0318543_10344133	Not Available	667	Open in IMG/M
3300031778\|Ga0318498_10286313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	740	Open in IMG/M
3300031819\|Ga0318568_10397510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	858	Open in IMG/M
3300031833\|Ga0310917_11114472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	526	Open in IMG/M
3300031835\|Ga0318517_10112356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1202	Open in IMG/M
3300031859\|Ga0318527_10028617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2052	Open in IMG/M
3300031890\|Ga0306925_10260247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1869	Open in IMG/M
3300031890\|Ga0306925_10411604	Not Available	1448	Open in IMG/M
3300031890\|Ga0306925_10947841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	881	Open in IMG/M
3300031897\|Ga0318520_10677990	Not Available	643	Open in IMG/M
3300031897\|Ga0318520_11053744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	514	Open in IMG/M
3300031910\|Ga0306923_10393211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1578	Open in IMG/M
3300031910\|Ga0306923_11564772	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300031912\|Ga0306921_11182805	Not Available	852	Open in IMG/M
3300031959\|Ga0318530_10205799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	807	Open in IMG/M
3300032010\|Ga0318569_10347979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	691	Open in IMG/M
3300032025\|Ga0318507_10427564	Not Available	576	Open in IMG/M
3300032025\|Ga0318507_10551688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	501	Open in IMG/M
3300032035\|Ga0310911_10230725	Not Available	1057	Open in IMG/M
3300032035\|Ga0310911_10246437	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300032035\|Ga0310911_10385312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	810	Open in IMG/M
3300032039\|Ga0318559_10010537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3290	Open in IMG/M
3300032041\|Ga0318549_10248166	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300032041\|Ga0318549_10450525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	579	Open in IMG/M
3300032063\|Ga0318504_10509606	Not Available	577	Open in IMG/M
3300032065\|Ga0318513_10526909	Not Available	578	Open in IMG/M
3300032066\|Ga0318514_10037131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2311	Open in IMG/M
3300032066\|Ga0318514_10095930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1498	Open in IMG/M
3300032067\|Ga0318524_10426445	Not Available	693	Open in IMG/M
3300032068\|Ga0318553_10319093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	813	Open in IMG/M
3300032076\|Ga0306924_12327386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	542	Open in IMG/M
3300032094\|Ga0318540_10297201	Not Available	779	Open in IMG/M
3300032180\|Ga0307471_103921938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	526	Open in IMG/M
3300033289\|Ga0310914_10433476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1190	Open in IMG/M
3300033290\|Ga0318519_10378375	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.72%
Host-Associated	Host-Associated	11.28%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.97%
Plants	Host-Associated → Plants	11.28%
Aquatic	Environmental → Aquatic	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.02%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.26%
Sediment	Environmental → Aquatic → Sediment	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.68%
Loam	Environmental → Terrestrial → Soil → Loam	16.54%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.01%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.26%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.75%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.75%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	54.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.78%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.03%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.01%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.75%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.75%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	34.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.05%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.26%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.26%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.50%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.50%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.75%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.75%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.75%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027181	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AP72_2010_repI_A100DRAFT_10032783	3300000837	Forest Soil	MEMNTQATKLQCAENDLKELMADVTRAMDRAQEAVAR
JGI10213J12805_101842381	3300000858	Soil	MSAQTPKLQAAENDLKQLMADVTRAMEKAQQAVARMTAKAA
JGI1027J12803_1060485711	3300000955	Soil	MGDMEMNAHASELQAAENNLKQLIAEVTRAMEKAQEAVAK
JGI1027J12803_1094028121	3300000955	Soil	MGDMEMNAHASVLQAAENNLKQLMAEVTRAMEKAQE
JGI12627J18819_100881514	3300001867	Forest Soil	MNAQAAKLQAAENDLKQLMADVSLAMEKAEEAVARIAPRQRPHP
JGI25405J52794_101136141	3300003911	Tabebuia Heterophylla Rhizosphere	MSAQPAKLQAAENDLKQLMADVTKAMEKAQEAVARMAAKAAAP
Ga0062595_1002221452	3300004479	Soil	MNAQATKLEAAENDLKQLMADVTRAIEKAQDAVARTVSKAA
Ga0066674_105096191	3300005166	Soil	MEMNAQATKLQAAENDLKQLMADVTRAMEKAQEAVARIAS
Ga0066680_104563852	3300005174	Soil	MNAQATKLQAAENDLKQLMADVTRAMEKAQEAVARIASKAA
Ga0066388_1040476621	3300005332	Tropical Forest Soil	MRAQATKLEDAENDLKQLMADVTRAMKKAEDAVARIASKAAPLT
Ga0066388_1044797551	3300005332	Tropical Forest Soil	MEMDAQATKLQTAENDLKQLMADVTRAMEKAQDAVTRIAPKA
Ga0066388_1062021321	3300005332	Tropical Forest Soil	MSAQTPKLQAAEHDLKQLMADVTRAMEKAQEAVARLAAKA
Ga0066388_1079350282	3300005332	Tropical Forest Soil	MKAQATKLQNPENDLKQRMADVTRAAAKAQEAVARIASKAA
Ga0070673_1015489051	3300005364	Switchgrass Rhizosphere	MNEQATKLETAESDLKQLMADVSRAMEKAQEAVARLTSTVGAA
Ga0070709_117916501	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MNTDDPKLQSAETDLKQLMADVTRAMEKAQQAIARVTAKETAV
Ga0070664_1011510971	3300005564	Corn Rhizosphere	MNEDATKLESAENNLKELMADVSRAMKKAEEAITRITTAGAATG
Ga0068859_1030683281	3300005617	Switchgrass Rhizosphere	MNAQAPKIEDAENDLKQLMADVTRAMEKAQQAVARIA
Ga0066905_1011047971	3300005713	Tropical Forest Soil	MNAQATKLQAAENDLKQLMADVTRVMEKAQEAVARIAFKAAAPQ*
Ga0066905_1012818121	3300005713	Tropical Forest Soil	MNAQATKLQAAENDLKQLMADVARAVEKAQEAVARI
Ga0066905_1015519182	3300005713	Tropical Forest Soil	MSAQPAKLQAAENDLKQLMADVTRAMEKAQEAVARLAAKAAA
Ga0066905_1016044242	3300005713	Tropical Forest Soil	MEMNAQATKLQAAENDLKQLMADVARAVEKAQEAVARI
Ga0068866_110389372	3300005718	Miscanthus Rhizosphere	MNPQATKLQAVENDLKQLMADVTRTMEKAQEAVARIASK
Ga0066903_1005450661	3300005764	Tropical Forest Soil	MDVSAQTPKLQAAEHDLKQLMADVTRAMEKAQEAVARLAAKA
Ga0066903_1019172783	3300005764	Tropical Forest Soil	MNAQATKLYAAENDLKQLMADVARAAEKAQEAVARI
Ga0066903_1019722385	3300005764	Tropical Forest Soil	MNAQATKLQTAENDLKQLIADVARAVEKAQEAVARITSKAAA
Ga0066903_1063232371	3300005764	Tropical Forest Soil	MDAQATKLQTAENDLKQLMADVTRAMEKAQDAVTRIAPKA
Ga0066903_1077977621	3300005764	Tropical Forest Soil	MANGEMEMNAQATKLHAAENDLKQLMADVARAAEKAQEAV
Ga0066903_1080751471	3300005764	Tropical Forest Soil	MNKGMEMDAQATKLQTAENDLKQLMADVTRAMEKAQDAVTRI
Ga0068870_106194122	3300005840	Miscanthus Rhizosphere	MNAEETKLQAVENDLKQLMVDVTRAMEKAQEAVARIASKPAPPTG
Ga0070717_119841021	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VANGEMEMNAQATKLHAAENDLKQLMADVARAAEKAQEAVARI
Ga0070712_1008182571	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MNTDDTKLQSAETDLKQLMADVTRAMEKAQQAIARV
Ga0075433_111192511	3300006852	Populus Rhizosphere	VNGGIEMDAQATKLQTAENDLKQLMADVTRAMEKAQ
Ga0099795_104627172	3300007788	Vadose Zone Soil	MRRAANGEIEMNAQEPKLEDAENDLKQLMADVTRAMEKAQQAVARIAS
Ga0126384_111943391	3300010046	Tropical Forest Soil	MEMNAQATKLQAAENDLKQLMADVTRVMEKAQEAVARIAFKAAAPQ*
Ga0126378_100224291	3300010361	Tropical Forest Soil	MNTLETKLQAAEDDLKQLMADVTRAMERAQEAVARMASNGA
Ga0126379_134466082	3300010366	Tropical Forest Soil	MEMNAQATKIQAAENDLKQLMADVTRAIEKAQEAVARISS
Ga0126381_1020566461	3300010376	Tropical Forest Soil	MEMNAQATKLEAAENDLKQLMADVTRAIEKAQDAVARI
Ga0134126_129907782	3300010396	Terrestrial Soil	MQMNAQATKLEGAENDLKQLMADVTRAMEKAQEAVAR
Ga0126383_120969712	3300010398	Tropical Forest Soil	MEMNAQATKLQAAENDLKQLMADVARAVEKAQEAVARIT
Ga0137377_104476441	3300012211	Vadose Zone Soil	MEMNAQATKLQAAENNLKQLMADVTQAMEKAQEAVARIAPKAA
Ga0150985_1136253391	3300012212	Avena Fatua Rhizosphere	MNVQATKLQAVETDLKQLMADVTRAMEKAQEAVARI
Ga0150985_1183740421	3300012212	Avena Fatua Rhizosphere	MGDKMNAQATKLQAVENDLKELMADVTRAMVKAQEAVA
Ga0137369_108562531	3300012355	Vadose Zone Soil	MEMIAQATKLQAAENDLKQLMADVTQAMEKAQEAVARIASKPAA
Ga0164298_108060972	3300012955	Soil	MEMNAQATKLHAVENDLKQLMADVTRAMEKAQEAVARIASK
Ga0164303_100024527	3300012957	Soil	MEMNAQAPKLEAAENDLKQLMADVTRAIEKAQEAVARI
Ga0164306_118884211	3300012988	Soil	MEMNAPATKLQAVENDLKQLMADVTQAMEKAQEAVARIA
Ga0157378_119078061	3300013297	Miscanthus Rhizosphere	MNEDATKLESAESNLKKLMADVSRAMEKAEEAITRIT
Ga0157378_119300931	3300013297	Miscanthus Rhizosphere	MKMNEQATKLETAASDLKQLMADVSRAMEKAQDAVA
Ga0132258_129898502	3300015371	Arabidopsis Rhizosphere	MEMNPQATKLQAVENDLKQLMADVTRTMEKAQEAVARIASK
Ga0182036_100480974	3300016270	Soil	MNARATKLQAAENDLKQLMADVTRAMEKAHEVAARIASKP
Ga0182036_115076631	3300016270	Soil	RATKLQAAENDLKQLMADVTRAMEKAQEVAARIASKPAAASLRLPDDH
Ga0182041_101741041	3300016294	Soil	MEMKTQATKLQAAEDELKQLMADVSRAMRKAEEAIARIAPN
Ga0182041_123145451	3300016294	Soil	MNAQPTKLQDAENDLKQLMADVTRAVEKAQEAVARLTSKATA
Ga0182033_104031121	3300016319	Soil	VANGEMEMNAQATKLQAAEDDLKQLMADVARAAEKAQEAVARI
Ga0182033_120662761	3300016319	Soil	MNTQATKLQAAEDDLKQLMADVTRAMEKAQEVAARIASKAA
Ga0182035_109334752	3300016341	Soil	MNKQGTKLQAAEDDLKQLMADVTRAMEKAQEVAARIAS
Ga0182035_115089912	3300016341	Soil	MNTQGTKLQAAEDDLKQLMADVTRAMEKAQEVAARIASKAVA
Ga0182032_101574782	3300016357	Soil	MGMNTQATKLQAAEDDLKQQMADVTRAMERAQEAVARITSNEAATSRHEVGG
Ga0182032_103031161	3300016357	Soil	MNTQGTKLQAAEDDLKQLMADVTRAMEKAQEVAARIASKA
Ga0182032_108356651	3300016357	Soil	KMNAQVTKLQAAENDLKELMADMTRAIKKAEEPLGR
Ga0182034_120368242	3300016371	Soil	NRGMKMNARATKLQAAENDLKQLMADVTRAMEKAQEVAARIASKPAAASLRLPDDH
Ga0182040_118939762	3300016387	Soil	VANGEMEMNAQATKLQAAETDLKQLMVDVARAVEKAQE
Ga0182037_104689452	3300016404	Soil	VANGEMEMNAQATKLQAAENDLKQLMADVARAAEKAQEAVARITS
Ga0182037_116684641	3300016404	Soil	VANGEMEMNAQATKLHAAENDLKQLMADVARAAEKAQEAVARITSKA
Ga0182039_109751301	3300016422	Soil	MEMKAQATKLQAAEDDLKRLMSDVSRAMRKAEEAIARI
Ga0184625_106589291	3300018081	Groundwater Sediment	MNEDATKLESAESNLKELMADVSRAMEKAQEAVARLTSTAGAAT
Ga0187772_114142572	3300018085	Tropical Peatland	MEMNAQATKFQAAENNLKELMADVSRAMEKAQEAVARIA
Ga0190270_102764232	3300018469	Soil	MNAQAPKLEDAENDLKQLMADVTRAMEKAQEAVARMPPTP
Ga0190273_107993102	3300018920	Soil	MNAQGTKLQSVENDLKELMADVTRAMEKAQEAVAR
Ga0210406_105483451	3300021168	Soil	MNAQAPKLEDAENDLKQLMADVTRAMEKAQQAVARIASKPA
Ga0210402_114992611	3300021478	Soil	MGDMQKSTQAMKLQAAENDLKELMADVARAMEKAQEEVARIASNAVALE
Ga0207684_100386131	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MNAQATKLQAAENGLKQLMADVTRTIEKAQQAVARISSRPRRPQQR
Ga0207693_108856571	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MNAQATKIQAAENDLKQLMADVTQAIEKAQQAVARISPKAA
Ga0207657_114563011	3300025919	Corn Rhizosphere	MNEQATKLETAASDLKQLMADVSRAMEKAQDAVARLTSTVGAA
Ga0207704_103395513	3300025938	Miscanthus Rhizosphere	MNEQATKLETAESDLKQLMADVSRAMEKAQEAVARLTSTVG
Ga0208997_10256821	3300027181	Forest Soil	MNAQAPKLEDAENDLKQLMADVTRAMEKAQQAVARIASKPAAAI
Ga0208981_11365992	3300027669	Forest Soil	VNAQATKLQAVESDLKQLMVDVTRAMEKAQEAVARIA
Ga0207428_109995941	3300027907	Populus Rhizosphere	MNEQATKLETAESDLKQLMADVSRAMEKAQEAVARLTS
Ga0307285_100440102	3300028712	Soil	MNAQATKLHAVENDLKQLMADVTRAMEKAQEDVAR
Ga0307289_100892651	3300028875	Soil	MGGEWDMEMNAQATKIQAAENNLKQLMADVTRAMEKAQEAVARIAA
Ga0075386_110373201	3300030916	Soil	MNAQATKLHAVENDLKQLMADVTRAMEKAQEAVARIAS
Ga0318516_101847721	3300031543	Soil	MNKQGTKLQAAEDDLKQLMADVTRAMEKAQEVAARIASK
Ga0318538_101117981	3300031546	Soil	MNARATKLQAAENDLKQLMADVTRAMEKAQEVAARIASKPAAAPLRLP
Ga0318515_100555771	3300031572	Soil	MNARATKLQAAENDLKQLMADVTRAMEKAQEVAARI
Ga0318515_106104111	3300031572	Soil	MNAQATKLQAAENDLKQLMTDVSLAMEKAQEAVARIA
Ga0310915_100348244	3300031573	Soil	MNARATKLQAAENDLKQLMADVTRAMEKAQEVAARIASKPAAASLRLPDDH
Ga0310915_107704784	3300031573	Soil	VANGEMEMNAQATKLHAAENDLKQLMADVARAAEK
Ga0318542_103992012	3300031668	Soil	VANGEMEMNAQAPKLQAAESDLKQLMADVARAMEKVQEAVARTTSKAA
Ga0318542_106881711	3300031668	Soil	MKAQATKLQAAENDLKQLMADVTRAMEKAQEAVARRASK
Ga0318560_108215992	3300031682	Soil	TQATKLQAAEDDLKKLMADVTRAMERAQEAVARITSNEAATSRHEVGG
Ga0306917_101678601	3300031719	Soil	MEMNAQATKLQAAENDLKQLMTDVSLAMEKAQEAVARIAP
Ga0318500_103726412	3300031724	Soil	MNARATKLQAAENDLKQLMADVTRAMEKAHEVAARIASKPAAASL
Ga0318501_104422251	3300031736	Soil	MNAQATKLHAAENDLKQLMADVARAAEKAQEAVARITSKAA
Ga0318494_104120501	3300031751	Soil	MKMNARATKLQAAENDLKQLMADVTRAMEKAQEVAARIASKPAAAPLR
Ga0318554_107074401	3300031765	Soil	MNKQGTKLQAAEDDLKQLMADVTRAMEKAQEVAAR
Ga0318526_101633784	3300031769	Soil	VANGEMEMNAQATKLQAAETDLKQLMVDLARAVEKAQETV
Ga0318546_108651662	3300031771	Soil	MNARATKLQAAETDLKQLMADVARAVEKAQEAVARITSKVAAAPLR
Ga0318543_102362681	3300031777	Soil	VANGEMEMNAQATKLQAAENDLKQLMADVTRAMEKAQEAVARIGFK
Ga0318543_103441331	3300031777	Soil	MNARATKLQAAENDLKQLMADVTRAMEKAQEVAARIA
Ga0318498_102863132	3300031778	Soil	MNTQGTKLQAAEDDLKQLMADVTRAMEKAQEVAARIASKPAAAPLRLPDDH
Ga0318568_103975101	3300031819	Soil	ETEMNKQGTKLQAAEDDLKQLMADVTRAMEKAQEVAARIASKPAAASLRLPDDH
Ga0310917_111144721	3300031833	Soil	VANGEMEMNAQATKLQAAETDLKQLMVDVARAMEKAQE
Ga0318517_101123563	3300031835	Soil	MKMNARATKLQAAENDLKQLMANVTRAMEKAQEVAARIASKPAAAPLRLPDDH
Ga0318527_100286173	3300031859	Soil	MNAQATKLQAAENDLKQLMADVTRAMEKAQEAVARIAFKAAA
Ga0306925_102602471	3300031890	Soil	MNARATKLQAAEDDLKQLMADVTRAMEKAHEVAARIA
Ga0306925_104116041	3300031890	Soil	MNAQATELQAENDLKQLMADLTRAMEKAQEAVAKIAPKTAAT
Ga0306925_109478413	3300031890	Soil	MNAQATKLQAAETDLKQLMVDVARAVEKAQEAVARITSKAA
Ga0318520_106779901	3300031897	Soil	MEMSAQATRLEAAENDLKELMADVTSAIEKAQLDVTKIDP
Ga0318520_110537442	3300031897	Soil	NARATKLQAAENDLKQLMADVTRAMEKAQEVAARIASKPAAASLRLPDDH
Ga0306923_103932113	3300031910	Soil	MNTEDTKLQSAETDLKQLMADVTRAMEKAQKAIARVTSKE
Ga0306923_115647722	3300031910	Soil	MRARATKILAAENDLKLLMADVTRAMEKAQDAVAR
Ga0306921_111828052	3300031912	Soil	VADGEMEMNAQATKLHAAENDLKQLMADVARAAEKAQEAVARIT
Ga0318530_102057991	3300031959	Soil	MNAQATKLQAAETDLKQLMVDVARAVEKAQEAVARITSKAAAAT
Ga0318569_103479791	3300032010	Soil	MNAQATKLQAAETDLKQLMVDVARAVEKAQEAVARIT
Ga0318507_104275642	3300032025	Soil	MEMNAQATKLYAAENDLKQLMADVARAAEKAQEAVARIT
Ga0318507_105516882	3300032025	Soil	NGETEMNKQGTKLQAAEDDLKQLMADVTRAMEKAQEVAARIASKPAAASLRLPDDH
Ga0310911_102307253	3300032035	Soil	MNAQATKLHAAENDLKQLMADVARAAEKAQEAVARITSKAATA
Ga0310911_102464371	3300032035	Soil	MKMNARATKLQAAENDLKQLMADVTRTMEKAQEVAARIASKPAA
Ga0310911_103853123	3300032035	Soil	VANGEMEMNAQATKLQAAETDLKQLMVDVARAMEKAQEAV
Ga0318559_100105372	3300032039	Soil	MNARATKLQAAENDLKQLMADVTRAMEKAQEVAARIASKPAAAPLRLPDDH
Ga0318549_102481661	3300032041	Soil	MNAQATKLQAAENDLKQLMADVTRAMEKAQEAVARVA
Ga0318549_104505251	3300032041	Soil	VANGEMEMNAQATKLQAAETDLKQLMVDVARAVEKA
Ga0318504_105096061	3300032063	Soil	MNAQATKLQAAENDLKQLMTDVSLAMEKAQEAVARIAPR
Ga0318513_105269091	3300032065	Soil	VANGEMEMNAQATKLHAAENDLKQLMADVARAAEKAQEAV
Ga0318514_100371311	3300032066	Soil	MNARATKLQAAENDLKQLMADVTRAMEKAQEVAARIASKPAAASLR
Ga0318514_100959303	3300032066	Soil	MNAQATKLHAAEDDLKQLMADVARAAEKAQEAVARITSKAATATT
Ga0318524_104264452	3300032067	Soil	MEMNAQATKLHAAENDLKQVMADVARAAEKAQEAVARITSKAAIATT
Ga0318553_103190932	3300032068	Soil	MNAQATKLHAAEDDLKQLMADVARAAEKAQEAVARITS
Ga0306924_123273861	3300032076	Soil	MTAPTTKLQAAEHDLKQLMVDVTRAAEKAQQAVARITGKAMANAVTE
Ga0318540_102972013	3300032094	Soil	MEMNAQATKLHAAENDLKQLMADVARAAEKAQEAVARITSKA
Ga0307471_1039219381	3300032180	Hardwood Forest Soil	ANGEMEMNAQAPKVEDAENDLQQLMADVTRAMEKAQ
Ga0310914_104334763	3300033289	Soil	MKAHATKLQAAENDLKQLMADVTRAMQKAEEAVARIVSET
Ga0318519_103783751	3300033290	Soil	MKMNARATKLQAAENDLKQLMADVTRAMEKAQEVAARIASKPAAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060208

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences