Metagenome / Metatranscriptome Family F060217

Basic Information
Family ID	F060217
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	90 residues
Representative Sequence	MNDLKYPERQTHSPETLTELSPQELLQRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDCLVRLTKETLEFADSLVEVTRVAGRAWA
Number of Associated Samples	65
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	71.32 %
% of genes near scaffold ends (potentially truncated)	32.33 %
% of genes from short scaffolds (< 2000 bps)	79.70 %
Associated GOLD sequencing projects	58
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Most Common Taxonomy
Group	Unclassified (77.444 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (42.105 % of family members)
Environment Ontology (ENVO)	Unclassified (62.406 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (93.233 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.83% β-sheet: 0.00% Coil/Unstructured: 40.17%
Feature Viewer

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Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF04366	Ysc84	4.51
PF13545	HTH_Crp_2	1.50
PF00027	cNMP_binding	1.50
PF00924	MS_channel	1.50
PF14321	DUF4382	0.75
PF05532	CsbD	0.75
PF12844	HTH_19	0.75
PF13544	Obsolete Pfam Family	0.75
PF03795	YCII	0.75
PF05163	DinB	0.75
PF01566	Nramp	0.75
PF06271	RDD	0.75
PF02602	HEM4	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	4.51
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	1.50
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	1.50
COG1587	Uroporphyrinogen-III synthase	Coenzyme transport and metabolism [H]	0.75
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	0.75
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	0.75
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.75
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.75
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.75

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.44 %
All Organisms	root	All Organisms	22.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.44 %
cellular organisms	root	All Organisms → cellular organisms	22.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.44 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	22.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.44 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	9.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.44 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	6.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.44 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001098\|JGI12633J13313_100009	All Organisms → cellular organisms → Bacteria → Acidobacteria	11404	Open in IMG/M
3300001098\|JGI12633J13313_100094	All Organisms → cellular organisms → Bacteria → Acidobacteria	4338	Open in IMG/M
3300001151\|JGI12713J13577_1016763	Not Available	625	Open in IMG/M
3300001167\|JGI12673J13574_1000692	Not Available	1566	Open in IMG/M
3300002245\|JGIcombinedJ26739_100109207	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2596	Open in IMG/M
3300002245\|JGIcombinedJ26739_101499342	Not Available	569	Open in IMG/M
3300003505\|JGIcombinedJ51221_10077053	Not Available	1307	Open in IMG/M
3300004099\|Ga0058900_1396290	Not Available	509	Open in IMG/M
3300004099\|Ga0058900_1427330	Not Available	862	Open in IMG/M
3300004100\|Ga0058904_1321499	Not Available	569	Open in IMG/M
3300004102\|Ga0058888_1394024	Not Available	1258	Open in IMG/M
3300004118\|Ga0058886_1340844	Not Available	543	Open in IMG/M
3300004120\|Ga0058901_1540628	Not Available	766	Open in IMG/M
3300004631\|Ga0058899_10010090	Not Available	1270	Open in IMG/M
3300004631\|Ga0058899_10011686	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1407	Open in IMG/M
3300004631\|Ga0058899_10049057	Not Available	1371	Open in IMG/M
3300004631\|Ga0058899_10233750	Not Available	1397	Open in IMG/M
3300004631\|Ga0058899_12271108	Not Available	791	Open in IMG/M
3300004631\|Ga0058899_12302010	Not Available	2656	Open in IMG/M
3300005434\|Ga0070709_11611534	Not Available	529	Open in IMG/M
3300005436\|Ga0070713_102313082	Not Available	520	Open in IMG/M
3300005538\|Ga0070731_10015074	All Organisms → cellular organisms → Bacteria	5492	Open in IMG/M
3300005541\|Ga0070733_10379421	Not Available	940	Open in IMG/M
3300005542\|Ga0070732_10235031	Not Available	1097	Open in IMG/M
3300005542\|Ga0070732_10443415	Not Available	785	Open in IMG/M
3300005602\|Ga0070762_11311430	Not Available	503	Open in IMG/M
3300005610\|Ga0070763_10249988	Not Available	961	Open in IMG/M
3300005921\|Ga0070766_10067787	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2047	Open in IMG/M
3300005921\|Ga0070766_10216131	Not Available	1204	Open in IMG/M
3300005921\|Ga0070766_10321835	Not Available	998	Open in IMG/M
3300005921\|Ga0070766_10350725	Not Available	958	Open in IMG/M
3300005921\|Ga0070766_10375693	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	927	Open in IMG/M
3300006175\|Ga0070712_100506156	Not Available	1013	Open in IMG/M
3300006176\|Ga0070765_100191518	All Organisms → cellular organisms → Bacteria	1851	Open in IMG/M
3300006176\|Ga0070765_100314620	All Organisms → cellular organisms → Bacteria	1449	Open in IMG/M
3300006176\|Ga0070765_100428318	Not Available	1238	Open in IMG/M
3300006176\|Ga0070765_100954923	Not Available	810	Open in IMG/M
3300006893\|Ga0073928_10001567	All Organisms → cellular organisms → Bacteria	43324	Open in IMG/M
3300011120\|Ga0150983_10696324	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300011120\|Ga0150983_11279973	Not Available	746	Open in IMG/M
3300011120\|Ga0150983_12271202	Not Available	541	Open in IMG/M
3300011120\|Ga0150983_12334749	Not Available	558	Open in IMG/M
3300011120\|Ga0150983_12361588	Not Available	837	Open in IMG/M
3300011120\|Ga0150983_12704471	Not Available	701	Open in IMG/M
3300011120\|Ga0150983_12960526	Not Available	776	Open in IMG/M
3300011120\|Ga0150983_13138681	Not Available	948	Open in IMG/M
3300011120\|Ga0150983_14231686	Not Available	506	Open in IMG/M
3300011120\|Ga0150983_16082222	Not Available	1127	Open in IMG/M
3300020579\|Ga0210407_10299915	Not Available	1255	Open in IMG/M
3300020579\|Ga0210407_10324722	Not Available	1203	Open in IMG/M
3300020579\|Ga0210407_10598928	Not Available	859	Open in IMG/M
3300020579\|Ga0210407_10686517	Not Available	794	Open in IMG/M
3300020580\|Ga0210403_10202064	Not Available	1631	Open in IMG/M
3300020580\|Ga0210403_10437254	Not Available	1066	Open in IMG/M
3300020580\|Ga0210403_11091145	Not Available	620	Open in IMG/M
3300020581\|Ga0210399_10018857	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5465	Open in IMG/M
3300020581\|Ga0210399_10077515	Not Available	2696	Open in IMG/M
3300020581\|Ga0210399_11148856	Not Available	619	Open in IMG/M
3300020583\|Ga0210401_10029765	All Organisms → cellular organisms → Bacteria	5202	Open in IMG/M
3300020583\|Ga0210401_10086971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2940	Open in IMG/M
3300020583\|Ga0210401_10114464	All Organisms → cellular organisms → Bacteria	2530	Open in IMG/M
3300020583\|Ga0210401_10331674	Not Available	1382	Open in IMG/M
3300020583\|Ga0210401_11026668	Not Available	683	Open in IMG/M
3300021168\|Ga0210406_10017924	All Organisms → cellular organisms → Bacteria → Acidobacteria	6674	Open in IMG/M
3300021168\|Ga0210406_10793447	Not Available	721	Open in IMG/M
3300021178\|Ga0210408_10403620	Not Available	1089	Open in IMG/M
3300021178\|Ga0210408_11027131	Not Available	637	Open in IMG/M
3300021180\|Ga0210396_10133301	Not Available	2238	Open in IMG/M
3300021180\|Ga0210396_10150760	Not Available	2088	Open in IMG/M
3300021180\|Ga0210396_10365064	All Organisms → cellular organisms → Bacteria	1272	Open in IMG/M
3300021180\|Ga0210396_11580432	Not Available	536	Open in IMG/M
3300021181\|Ga0210388_11433169	Not Available	579	Open in IMG/M
3300021401\|Ga0210393_10486951	Not Available	1007	Open in IMG/M
3300021401\|Ga0210393_10700262	Not Available	826	Open in IMG/M
3300021401\|Ga0210393_11159944	Not Available	623	Open in IMG/M
3300021402\|Ga0210385_10762013	Not Available	742	Open in IMG/M
3300021402\|Ga0210385_11098622	Not Available	611	Open in IMG/M
3300021403\|Ga0210397_11091942	Not Available	620	Open in IMG/M
3300021405\|Ga0210387_10232882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1607	Open in IMG/M
3300021405\|Ga0210387_10310317	Not Available	1389	Open in IMG/M
3300021405\|Ga0210387_10663654	Not Available	925	Open in IMG/M
3300021406\|Ga0210386_11511023	Not Available	560	Open in IMG/M
3300021407\|Ga0210383_10690252	Not Available	878	Open in IMG/M
3300021407\|Ga0210383_10931349	Not Available	739	Open in IMG/M
3300021407\|Ga0210383_11191424	Not Available	640	Open in IMG/M
3300021420\|Ga0210394_10003909	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17920	Open in IMG/M
3300021420\|Ga0210394_10005761	All Organisms → cellular organisms → Bacteria	13739	Open in IMG/M
3300021420\|Ga0210394_10418552	Not Available	1179	Open in IMG/M
3300021420\|Ga0210394_11124851	Not Available	676	Open in IMG/M
3300021432\|Ga0210384_10000636	All Organisms → cellular organisms → Bacteria	53006	Open in IMG/M
3300021432\|Ga0210384_10795158	Not Available	843	Open in IMG/M
3300021432\|Ga0210384_10834721	Not Available	820	Open in IMG/M
3300021432\|Ga0210384_11050426	Not Available	717	Open in IMG/M
3300021432\|Ga0210384_11289161	Not Available	635	Open in IMG/M
3300021433\|Ga0210391_10681677	Not Available	806	Open in IMG/M
3300021433\|Ga0210391_11511799	Not Available	515	Open in IMG/M
3300021475\|Ga0210392_10235724	Not Available	1291	Open in IMG/M
3300021477\|Ga0210398_10517489	Not Available	971	Open in IMG/M
3300021478\|Ga0210402_11078354	Not Available	730	Open in IMG/M
3300021479\|Ga0210410_11119241	Not Available	678	Open in IMG/M
3300021479\|Ga0210410_11592482	Not Available	546	Open in IMG/M
3300021559\|Ga0210409_10220173	Not Available	1724	Open in IMG/M
3300022557\|Ga0212123_10000114	All Organisms → cellular organisms → Bacteria	271243	Open in IMG/M
3300027090\|Ga0208604_1004390	Not Available	1324	Open in IMG/M
3300027109\|Ga0208603_1036090	Not Available	769	Open in IMG/M
3300027173\|Ga0208097_1042821	Not Available	527	Open in IMG/M
3300027545\|Ga0209008_1083715	Not Available	716	Open in IMG/M
3300027619\|Ga0209330_1092371	Not Available	689	Open in IMG/M
3300027635\|Ga0209625_1001650	All Organisms → cellular organisms → Bacteria	5181	Open in IMG/M
3300027842\|Ga0209580_10335859	Not Available	753	Open in IMG/M
3300027869\|Ga0209579_10011370	All Organisms → cellular organisms → Bacteria	5395	Open in IMG/M
3300027884\|Ga0209275_10198014	Not Available	1085	Open in IMG/M
3300027889\|Ga0209380_10148862	All Organisms → cellular organisms → Bacteria	1367	Open in IMG/M
3300027889\|Ga0209380_10203057	Not Available	1164	Open in IMG/M
3300027889\|Ga0209380_10310059	Not Available	927	Open in IMG/M
3300027889\|Ga0209380_10417097	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300027889\|Ga0209380_10708242	Not Available	577	Open in IMG/M
3300027895\|Ga0209624_10003810	All Organisms → cellular organisms → Bacteria	10522	Open in IMG/M
3300027895\|Ga0209624_10577728	Not Available	746	Open in IMG/M
3300028023\|Ga0265357_1011426	Not Available	905	Open in IMG/M
3300028047\|Ga0209526_10794072	All Organisms → cellular organisms → Bacteria → Acidobacteria	587	Open in IMG/M
3300028906\|Ga0308309_10335194	All Organisms → cellular organisms → Bacteria	1286	Open in IMG/M
3300028906\|Ga0308309_11089875	Not Available	690	Open in IMG/M
3300031708\|Ga0310686_106410686	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1799	Open in IMG/M
3300031708\|Ga0310686_116769381	Not Available	2348	Open in IMG/M
3300031715\|Ga0307476_10416144	Not Available	993	Open in IMG/M
3300031754\|Ga0307475_10742733	Not Available	781	Open in IMG/M
3300031823\|Ga0307478_10313468	Not Available	1287	Open in IMG/M
3300032205\|Ga0307472_100786621	Not Available	867	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.25%
Host-Associated	Host-Associated	0.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.74%
Aquatic	Environmental → Aquatic	1.50%
Plants	Host-Associated → Plants	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.74%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.13%
Loam	Environmental → Terrestrial → Soil → Loam	46.62%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.75%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	45.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	44.36%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	6.02%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.26%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	42.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	30.08%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	14.29%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.51%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.01%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.26%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001098	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1	Environmental	Open in IMG/M
3300001151	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3	Environmental	Open in IMG/M
3300001167	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004099	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF236 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004100	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF244 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004102	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF212 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004118	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF208 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004120	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF238 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027173	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028023	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5	Host-Associated	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12633J13313_1000096	3300001098	Forest Soil	MNDLKHSEQQTHSLETLTELNPQELLQRIHAAETAIFLRLQGMRGSSIELVEGQAIQDALDSLVRLTKETLEFADSLVKVTRIAGRAWA*
JGI12633J13313_1000944	3300001098	Forest Soil	MNDLKYPERQTHSPETLTELSPQELLQRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDCLVRLTKGTLEFSASLVEVTRAGGRAWT*
JGI12713J13577_10167632	3300001151	Forest Soil	MNDLKYPERQTHSPETLTELSPQELLQRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDCLVRLTKGTLEFAASLVEVTRAGGRAWT*
JGI12673J13574_10006921	3300001167	Forest Soil	MNHLEYSERQTCSPEALTELNSQELLQRIHAAETAIFLRLQGMRTSSIDLVEGQAIQDALDGLVRHTKETLEFADSLVAVTRVVGRA*
JGIcombinedJ26739_1001092077	3300002245	Forest Soil	MNDLKYPERQTHSPETLTELSPQELLQRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDCLVRLTKGTLEF
JGIcombinedJ26739_1014993422	3300002245	Forest Soil	LKHSQQQTHSPETLTELSPQELLQRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDCLVRLTKETLEFADSLVEVTRVAGRAWA*
JGIcombinedJ51221_100770532	3300003505	Forest Soil	MKDLKYSEQQTQSPETLTELNPQELLQRIHAAETAILSRLQGMRINSIDLVEGQAIQDALDCLVRLTKDTLEFADSLVEVTRVAGRAWA*
Ga0058900_13962901	3300004099	Forest Soil	VSDELMNDLKYLDRQTHSPETLAELNPQQLIQRIQAAETAIFCRLQGMRLSSIELVEGQAIQDALDCLVRLTKETLEFADSLFEVTRAAGRAWA*
Ga0058900_14273301	3300004099	Forest Soil	MNDLKHSERQTHSPEILTEVNPQELLQRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDCLVRLTKETLEFADSLVEVTRVGGRAWA*
Ga0058904_13214992	3300004100	Forest Soil	MSDEKYPESRTPSPETLRDLNPEQLVQRIRAAEEAIFSRLHKMRTNSIELLEGQAIQDALDGLLRLTKETLEFADSLVEVTRATETAWA*
Ga0058888_13940242	3300004102	Forest Soil	MNDQKDSERQTHSPETLNELNAQELLQQIHAAETAIFSRLQGMRIRSIDLVEGQAIQDALDGLVRLTKETLEFADSLVEVTRVAGRAWA*
Ga0058886_13408441	3300004118	Forest Soil	MSDEKYPESQTLFPEVLRDLNPEQLVERIRAAEEAIFSRLQRMRTNSIELLEGQAIQDALDGLLRLTKETLEFADSLVEVTRATETAWA*
Ga0058901_15406282	3300004120	Forest Soil	MNDLKYPERQTHSPEILTEVNPQELLQRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDCLVRLTKETLEFADSLVEVTRVAGRAWA*
Ga0058899_100100902	3300004631	Forest Soil	MNDLKYSERQTHSPETLTELNPQELLQRIHAAETAIFLRLQGMRISSIDLVEGQAIQDALDGLMRLTKETLEFADSLVEVTRAAGRAWA*
Ga0058899_100116862	3300004631	Forest Soil	MNDLNYSRQQTQSPETLTELNPQELLQRIHAAETAIFLRLHGMRISSIDLVEGQAIQDALDCLVRLTKETLEFAASLVEVTRVAGRAWA*
Ga0058899_100490572	3300004631	Forest Soil	MNDLKHSQQQTHSPETLTELSPQELLQRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDCLVRLTKETLEFADSLVEVTRVAGRAWA*
Ga0058899_102337503	3300004631	Forest Soil	MNDLGHPEQQTHCPETLTELSPQELLQRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDCLVRVTKETLEFADSLVEVTRAAGRAWT*
Ga0058899_122711081	3300004631	Forest Soil	MNDLKYPERQTHSPEILTEVNPQELLQRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDCLVRLTKETLEFADSLVEVTRVGGRAWA*
Ga0058899_123020105	3300004631	Forest Soil	MQHAPRTNLRMCPQVNSNPESQFLISSFKRRKGGPRPQATDGVVMNDLKHSQRQTCSPETLNELNPQELLQQIHAAETAIFSRLRGMRISSIDLVEGQAIQDALDGLVRLTKETLEFADSLVEVTRVAGRAWA*
Ga0070709_116115341	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MNDLGHPEQQTHCPETLTELSPQELLQRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDCLVRLTKETLEFADSLVEVTRVAGRAWA*
Ga0070713_1023130821	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MNDLKHSQQQTHSPETLTELSPQELLQRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDCLVRLTKQTLEFADSLVEVTRVAGRAWA*
Ga0070731_100150743	3300005538	Surface Soil	MNDLEHSEQQTHSPDTLTELSPQELLQRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDCLVRLTKETLEFADSLVEVTRVAGEAWA*
Ga0070733_103794211	3300005541	Surface Soil	MNDLKRSQQQTHSPETLTELSPQELLQRIHAAETAIFSRLQGMRISSINFVGGTGDPPWSVVRLTKETLEFADSLVEVTRVAGRGWA*
Ga0070732_102350313	3300005542	Surface Soil	MNDLNYTEQQTHSPEILNELNPQELLQRIHAAETAIFSRLQGMRMTSIDLVEGQAIQDALDCLVRLTKETLEFADSLVEVTRIAGRSWA*
Ga0070732_104434151	3300005542	Surface Soil	TLTELSPQELLQRIHAAETAIFSRLQGMRISSIDLMEGQAIQDALDCLVRLTKETLEFADSLVEVTRVAGRAWA*
Ga0070762_113114301	3300005602	Soil	GALMKDLKYSEQQTQSPETLTELNPQELLQRIHAAETAILSRLQGMRINSIDLVEGQAIQDALDCLVRLTKDTLEFADSLVEVTRVAGRAWA*
Ga0070763_102499881	3300005610	Soil	MNDLKHSQQQTHSPETLTELSPQELLQRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDCLVRVTKETLEFADSLVEVTRAAGRAWT*
Ga0070766_100677872	3300005921	Soil	MNDPNYPEQKTYSPETLSELNPQELLQQIHAAETAIFWRLQGMRTSSIELVEGQVIQDALDGLLRLSKETLEFADSLVEVTRAAGRAWA*
Ga0070766_102161313	3300005921	Soil	MNDLKYPERQTHSQETLAELNPQELLQRIHAAETAIFLRLQGMRISSIDLVEGQAIQDALDGLMRLTKETLEFADSLVEVTRAAGRAWA*
Ga0070766_103218351	3300005921	Soil	MNELEHSEQQTHSPDTLTELSPQELLQRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDCLVRLTKETLEFADSLVEVTRVAGRAWA*
Ga0070766_103507253	3300005921	Soil	MNDLKYPEQQTHSPETLTDLNPQELLQKIHAAEPAISLRLQGMRISSLDLLEGRAIQDALDGLMHLTKETLEFADSLVEVTRVAGRAWA*
Ga0070766_103756931	3300005921	Soil	MNNLECSERQTHSREPLTELNPQELVQRIQAAETAIFLRLQGMRISSIDLMEGQAIQDALDGLLRLSKETLEFADSLIEVTRVAGRAWA*
Ga0070712_1005061561	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	GVVMNDLKHSQQQTHSPETLTELSPQELLQRIHAAETAIFSRLQGMRISSINFVEGQAIRLGVLVRLTKETLEFADSLVEVTRVAGRGWA*
Ga0070765_1001915184	3300006176	Soil	MNDLRHSEHQTHSPEILTELNPQELLQRIQAAETEIFSRLQGMRISSIELVEGQAIQDALDCLVRLTKDTLEFADSLVEVTRVAGR
Ga0070765_1003146201	3300006176	Soil	HSPEILTEVNPQELLQRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDCLVRLTKETLEFADSLVEVTRVGGRAWA*
Ga0070765_1004283182	3300006176	Soil	MNDLKYLDRQTHSPETLAELNPQQLIQRIQAAETAIFCRLQGMRLSSIELVEGQAIQDALDCLVRLTKETLEFADSLFEVTRAAGRAWA*
Ga0070765_1009549231	3300006176	Soil	MSDEKYPESQTPFPETLRDLNPEQLVQRIRAAEEAIFSRLQRMRTNSIELLEGQAIQDALDGLLRLTKETLEFADSLVEVTRAADTAWA*
Ga0073928_1000156742	3300006893	Iron-Sulfur Acid Spring	MHSPDTLSELDPQELLQRIHAAETAIFLCLQGMRTSSIDLVEGQAIQDALDGLMRLTKETLEFADSLVEVTRAAGRAWA*
Ga0150983_106963241	3300011120	Forest Soil	QQTQSPETLTELNPQELLQRIHAAETAIFLRLHGMRISSIDLVEGQAIQDALDCLVRLTKETLEFAASLVEVTRVAGRAWA*
Ga0150983_112799731	3300011120	Forest Soil	MNDLKHSEQQTHSLETLTELNPQELLQRIHAAETAIFLRLQGMRGSSIELVEGQAIQDALDSFVRLTKETLEFADSLVKVTRIAGRAWA*
Ga0150983_118169231	3300011120	Forest Soil	MYPQVNNDPKSQFLNTIVRTMEAQPRPQAADGLVMNDLKYSKRHTHSPETLTELNLQELLQRIHAAETQILSRLQGMRTSSTELVEGQAIQDALDGLVRLTKETLEFADLLVEVTRIAGRTWA*
Ga0150983_122712021	3300011120	Forest Soil	MIDEKYSESQTPSPETLRDLNPEQLVQRIRAAEEAIFSRLQRMRTNSIELLEGQAIQDALDGLLRLRNDTLEFADSLIEVTRATDTAWA*
Ga0150983_123347491	3300011120	Forest Soil	LTELSPQELLQRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDCLVRLTKETLEFADSLVEVTRVAGGAWA*
Ga0150983_123615881	3300011120	Forest Soil	TLRDLNPEQLVQRIRAAEEAIFSRLQRMRTNSIELLEGQAIQDALDGLLRLTKDTLEFADSLLEVTRASDQAWA*
Ga0150983_127044711	3300011120	Forest Soil	MYPQVNSNPEAQFLISSFERWKRDPRPQAADGVVMNVLRDLETQTDSPETLVELNPQELLQRIHAAETAIFLRLQEMRISSMDLVEGQAIQDALDSLMRLTKETLEFADSLV
Ga0150983_128036781	3300011120	Forest Soil	QVNSNPEVQFLNRIVRTMEARPRPQAADGLVMNDLKYSERHTHSPETLTELNLQELLQRIHATETQIFSRLQGMRISSIDLVEGQAIQDALDGLLRLSKETLKFAGSLIEVTRIAGRTWA
Ga0150983_129605261	3300011120	Forest Soil	MNDLKHSQRQTCSPETLNELNPQELLQQIHAAETAIFSRLRGMRISSIDLVEGQAIQDALDGLVRLTKETLEFADSLVEVTRVAGRAWA*
Ga0150983_131386812	3300011120	Forest Soil	MCPQVNSNPKSKCLISSLEHEARPKPPVVDGALMNDLKHSEHQTHSPETLTELSPQELLQRIHAAETAIFSRLQGMRISSIDLMEGQAIQDALDCLVRLTKETLEFADSLVEVTRVAGRA
Ga0150983_142316862	3300011120	Forest Soil	ERWKGGPRPQAADGVAMNDLNHSEQQTYSPESLSELNPHELLQRIHAAETAIFLRLQGMRISSIDLVEGQAIQDALDGLVRLTKETLEFADSLVEVTRVAGRAWA*
Ga0150983_160822221	3300011120	Forest Soil	MNDQKDSERQTHSPETLNELNSQELLQQIHAAETAIFSRLQGMRIRSIDLVEGQAIQDALDGLVRLTKETLEFADSLVEVTRVAGRAWA*
Ga0210407_102999151	3300020579	Soil	MNDLKHSEHQTHSPETLTELSPQELLQRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDCLVRLTKDTLEFADSLVEVTRVAGRAWA
Ga0210407_103247222	3300020579	Soil	MNDLKYLEQQTHSPETLAELSPRELLQRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDRLVRLTKETLELADSLVEVTRVAGRAWA
Ga0210407_105989282	3300020579	Soil	MGALMKDLKYSEQQTQSPETLTELNPQELLQRIHAAETAILSRLQGMRINSIDLVEGQAIQDALDCLVRLTKDTLEFADSLVEVTRVAGRAWA
Ga0210407_106865171	3300020579	Soil	CPETLTELSPQELLLRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDCLVRVTKETLEFADSLVEVTRAAGRAWT
Ga0210403_102020643	3300020580	Soil	MNDRGHPEQQTHCPETLTELSPQELLQRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDCLVRVTKETLEFADSLVEVTRAAGRAWT
Ga0210403_104372541	3300020580	Soil	MNDLKHSQQQTHSPETLTELSPQELLQRIHAAETAIFSRLQGMQISSIDLVEGQAIQDALDCLMRLTKETLEFADSLVEVTRVAGRAWA
Ga0210403_110911451	3300020580	Soil	MNDLKHSEQQTHSPETLTELSPQELLQRIHAAETAIFSRLQGMRISSIDLMEGQAIQDALDCLVRLTKETLEFADSLVEVTRVAGRAWA
Ga0210399_100188573	3300020581	Soil	MKDLKYSEQQTQSRETLTELNPQELLQRIHAAETAILSRLQGMRINSIDLVEGQAIQDALDCLVRLTKDTLEFADSLVEVTRVAGRAWA
Ga0210399_100775151	3300020581	Soil	MNDLKYSKRHTHSPETLTELNLQELLQRIHAAETQILSRLQGMRTSSIELVEGQAIQDALDGLVRLTKETLEFADSLVEVTRIAGRTWA
Ga0210399_111488561	3300020581	Soil	MNDLNYSRQQTQSPETLTELNPQELLQRIHAAETAIFLRLHGMRISSIDLVEGQAIQDALDCLVRLTKETLEFADSLVEVTRVGGRAWA
Ga0210401_100297652	3300020583	Soil	MNDLKYPERQTHSPETLTELSPQELLQRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDCLVRLTKGTLEFAASLVEVTRAGGRAWT
Ga0210401_100869711	3300020583	Soil	MNDLKHSEQQTHSLETLTELNPQELLQRIHAAETAIFLRLQGMRGSSIELVEGQAIQDALDSFVRLTKETLEFADSLVKVTRIAGRAWA
Ga0210401_101144646	3300020583	Soil	MNDLGHPQQQTHCPETLTELSPEELLQRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDCLVRVTKETLEFADSLVEVTRAAGRAWT
Ga0210401_103316742	3300020583	Soil	MYPQVNSDPKSQFLNTIVRTMEARPRPQAADGLVMNDAKSFERQMHSPATLSELNPQELVQRIHAAETAIFLRLQGMRVTSIDLVEGQAIQDALDGLVRLTKETLEFADSLVEVTRIAGRTWA
Ga0210401_110266681	3300020583	Soil	MEARPRPQAADGLVMNDLKYSERHTHSPETLTELNLQELVQRIHATETQIFSRLQGMRISSIDLVEGQAIQDALDGLLRLSKETLKFAGSLIEVTRIAGRTWA
Ga0210406_100179248	3300021168	Soil	MGALMKDLKYSEQQTQSPETLTELNPQELLQRIHAAETAILSRLQGMRINSIDLVEGQAIQDALDCLRRLTKDTLEFADSLVEVTRVAGRAWA
Ga0210406_107934471	3300021168	Soil	NTLNNKTYCPETLTELSPQELLQRIHAAETAIFSRLQGMRISSIDLMEGQAIQDALDCLVRLTKETLEFADSLVEVTRVAGRAWA
Ga0210408_104036202	3300021178	Soil	MGALMKDLKYSEQQTQSPETLTELNPQELLQLIHAAETAILSRLQGMRINSIDLVEGQAIQDALDCLVRLTKDTLEFADSLVEVTRVAGRAWA
Ga0210408_110271312	3300021178	Soil	MNDLKHSEQQTHSLETLTELNPQELLQRIHAAETAIFLRLQGMRGSSIELVEGQAIQDALDSFVRLTKETLEFADSLVKVTR
Ga0210396_101333014	3300021180	Soil	MNDLGHPEQQTHCPETLTELSPQELLLRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDCLVRVTKETLEFADSLVEVTRAAGRAWT
Ga0210396_101507603	3300021180	Soil	MGALMKDLKYSEQQTQSPETLTELNPQELLQRIHVAETAILSRLQGMRINSIDLVEGQAIQDALDCLVRLTKDTLEFADSLVEVTRVAGRAWA
Ga0210396_103650643	3300021180	Soil	VRTMEARPRPQAADGLVMNDLKYSERHTHSPETLTELNLQELLQRIHATETQIFSRLQGMRISSIDLVEGQAIQDALDGLLRLSKETLKFAGSLIEVTRIAGRTWA
Ga0210396_115804322	3300021180	Soil	MNDLKHSEHQTHSPETLTELSPQELLQRIHAAETAIFSRLQGMRISSIDLMEGQAIQDALDCLVRLTKETLEFADS
Ga0210388_103789302	3300021181	Soil	MYLQVNRDPKSQFLNTIVRTMEAQPRPQADGLVMNDLKYSERHTHSPETLTELNLQELLQRIHAAETQILSRLQGMRTSSIELVEGQAIQDALDGLVRLTKETLEFADLLVEVTRIAGRTWA
Ga0210388_114331691	3300021181	Soil	SSNTKRGPMPQAADGVAMNDLNHSEQQTYSPESLSELNPQELLQRIHAAETAIFLRLQGMRISSIDLVEGQAIQDALDSLVRLTKETLEFADSLVEVTRVAGRAWA
Ga0210393_104869511	3300021401	Soil	MNDLKHSEQQTHSPETLTELSPQELLQRIHAAETAIFSRLQGMRISSIDLMEGQAVQDALDCLVRLTKETLEFADLLVEVTRVAGRAWA
Ga0210393_107002621	3300021401	Soil	GVFMNDLKYLEQQTHSPETLAELSPRELLQRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDRLVRLTKETLELADSLVEVTRVAGRAWA
Ga0210393_111599442	3300021401	Soil	MPQAADGVAMNDLNHSEQQTYSPESLSELNPQELLQRIHAAETAIFLRLQGMRISSIDLVEGQAIQDALDSLVRLTKETLEFADSLVEVTRVAGRAWA
Ga0210385_107620133	3300021402	Soil	KYSEQQTQSPETLTELNPQELLQRIHAAETAIFSRLQGMRINSIDLVEGQAIQDALDCLVRLTKDTLEFADSLVEVTRVAGRAWA
Ga0210385_110986221	3300021402	Soil	TLTELSPQELLQRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDCLVRLTKETLEFADSLVEVTRVAGRAWA
Ga0210397_110919422	3300021403	Soil	MKDLKYSEQQTQSPETLTELNPQELLQRIHAAETAILSRLQGMRINSIDLVEGQAIQDALDCLVRLTKDTLEFADSLVEVTRVAGRAWA
Ga0210387_102328824	3300021405	Soil	MNDLKYPEQQTHSQESLVELNPQELLQRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDCLVRLTKETLEFADSLVEVTRVAGRAWA
Ga0210387_103103173	3300021405	Soil	MNDLKHSEQQTHCPETLTELSPQELLQRIHAAETAIFSRLQGMRISSIDLMEGQAIQDALDCLVRLTKETLEFADSLVEVTRVAGRAWA
Ga0210387_106636541	3300021405	Soil	MNDLKHSQQQTHSPETLTELSPQELLQRIHAAETAIFSRLQGMQISSIDLVEGQAIQDALDCLMRLTKETLEFADSLVEVTRV
Ga0210386_115110231	3300021406	Soil	MNDLKHSQQQTHSPETLTELSPQELLQRIHAAEAAIFSRLQGMRISSIDLVEGQAIQDALDCLVRLTKETLEFAD
Ga0210383_106902522	3300021407	Soil	MNDLKHSERQTHSPEILTEVNPQELLQRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDCLVRLTKETLEFADSLVEVTRVGGRAWA
Ga0210383_109313492	3300021407	Soil	MNDLKHSEHQTHSPETLTELSPQELLQRIHAAETAIFSRLQGMRISSIDLMEGQAIQDALDCLVRLTKETLEFADSLVEVTRVAGRAWA
Ga0210383_111914242	3300021407	Soil	RKRRMGALMKDLKYSEQQTQSPETLTELNPQELLQRIHAAETAILSRLQGMRINSIDLVEGQAIQDALDCLVRLTKDTLEFADSLVEVTRVAGRAWA
Ga0210394_100039095	3300021420	Soil	MNDLNYTEQQTHSPEILNELNPQELLQRIHAAETAIFSRLQGMRITSIDLVEGQAIQDALDCLVRLTKETLEFADSLVEVTRIAGRSWA
Ga0210394_1000576114	3300021420	Soil	MKDLKYSEQQTQSLETLTELNPQELLQRIHAAETAILSRLQGMRINSIDLVEGQAIQDALDCLVRLTKDTLEFADSLVEVTRVAGRAWA
Ga0210394_104185522	3300021420	Soil	MNDLKHSQQQTHSPETLTELSPQELLQRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDCLVRLTKGTLEFADSLVEVTRAGGRAWT
Ga0210394_111248512	3300021420	Soil	MNDLKHSEQQTHSLETLTELNPQELLQRIHAAETAIFLRLQGMRGSSIELVEGQAIQDALDSLVRLTKETLEFADSLVKVTRIAGRAWA
Ga0210384_1000063646	3300021432	Soil	MSDRKYPESRTLFPETLRDLNPEQLVQRIRAAEEAIFARLQRMRTNSIELLEGQAIQDALDGLLRLTKQTLEFADSLVEVTRATETAWA
Ga0210384_107951582	3300021432	Soil	MSDEKYPESQTPSPETLRDLNPEQLVQRIRAAEEAIFSRLQRMRTNSIELLEGQAIQDALDGLLRLTKDTLEFADSLLEVTRASDQAWA
Ga0210384_108347211	3300021432	Soil	MNDLKYPERQTHSPETLTELSPQELLQRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDCLVRLTKGTLEFSASLVEVTRAGGRAWT
Ga0210384_110504261	3300021432	Soil	ETLRDLNPEQLVQRIRAAEEAIFSRLHKMRTNSIELLEGQAIQDALDGLLRLTNDTLEFADSLIEVTRATDTAWA
Ga0210384_112891611	3300021432	Soil	SFERWKRGPRPQAADGVVMNDLKYSERQTHSPETMTDLNQQELLQRIHAAETAIFWRLQGMRTSSIELVEGQAIQDAQDGLLRLSKETLEFADSLVEVTRAAGRAWA
Ga0210391_106816771	3300021433	Soil	MEARPRPQAADGLVMNDLKYSERHTHSPETLTELNLQELLQRIHATETQIFSRLQGMRISSIDLVEGQAIHDALDGLLRLSKETLKFADSLI
Ga0210391_115117992	3300021433	Soil	HSSNTKRGPMPQAADGVAMNDLNHSEQQTYSPESLSELNPQELLQRIHAAETAIFLRLQGMRISSIDLVEGQAIQDALDSLVRLTKETLEFADSLVEVTRVAGRAWA
Ga0210392_102357241	3300021475	Soil	MNDLKHSEHQTHSPETLTELSPQELLQRIHAAETAIFSRLQGMRISSIDLMEGQAIQDALDGLVRLTKDTLEFADSLVEVTRVAGRAWA
Ga0210398_105174891	3300021477	Soil	QQTHCPETLTELSPEELLQRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDCLVRVTKETLEFADSLVEVTRAAGRAWT
Ga0210402_110783541	3300021478	Soil	MKDLKYSEQQTQSPETLTELNPQELLQRIHAAETAIFSRLQGMRINSIDLVEGQAIQDALDCLVRLTKDTLEFADSLVEVTRVAGRALA
Ga0210410_111192411	3300021479	Soil	TELNPQELLQRIHAAETAILSRLQGMRINSIDLVEGQAIQDALDCLVRLTKDTLEFADSLVEVTRVAGRAWA
Ga0210410_114661202	3300021479	Soil	AHRGCFRAVCSSFQTSDNLRWKQRRQQLSDVLMNDLKYPERQTHSPETLTELSPQELLQRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDCLVRLTKGTLEFAASLVEVTRAGGRAW
Ga0210410_115924821	3300021479	Soil	MNDLKHSEHQTHSPETLTELSPQELLQRIHAAETAIFSRLQGMRISSIDLMEGQAIQDALDCLVRLTKETLEFADSLVEVTRVAGRA
Ga0210409_102201731	3300021559	Soil	MEARPRPQAADGLVMNDLKYSERHTHSPETLTELNLQELVQRIHATETQIFSRLQGMRISSIDLVEGQAIQDALDGLLRLSKETLKFAGSLIEVTRIAGRTW
Ga0212123_10000114264	3300022557	Iron-Sulfur Acid Spring	MHSPDTLSELDPQELLQRIHAAETAIFLCLQGMRTSSIDLVEGQAIQDALDGLMRLTKETLEFADSLVEVTRAAGRAWA
Ga0208604_10043902	3300027090	Forest Soil	MNDLGHPEQQTHCPETLTELSPQELLQRIHAAETAIFSPLQGMRISSIDLVEGQAIQDALDCLVRVTKETLEFADSLVEVTRVAGRAWA
Ga0208603_10360901	3300027109	Forest Soil	MNDLKHSQQQTHSPETLTELSPQELLQRIHAAETAIFSRLQGMRISSIDLAEGQAIQDALDCLVRLTKETLEFADSLVEVTRVAGRAWA
Ga0208097_10428211	3300027173	Forest Soil	MKDLKYSEQQTQSPETLTELNPQELLQRIHAAETAILSRLQGMRINSIDLVEGQAIQDALDCLVRVTKETLEFADSLVEVTRAAGRAWT
Ga0209008_10837152	3300027545	Forest Soil	SSFQTSDNLRWKQRRQQLSDVLMNDLKYPERQTHSPETLTELSPQELLQRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDCLVRLTKGTLEFAASLVEVTRAGGRAWT
Ga0209330_10923712	3300027619	Forest Soil	MNDLKYPERQTHSPETLTELSPQELLQRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDCLVRLTKETLEFADSLVEVTRVAGRAWA
Ga0209625_10016506	3300027635	Forest Soil	MNHLEYSERQTCSPEALTELNSQELLQRIHAAETAIFLRLQGMRTSSIDLVEGQAIQDALDGLVRHTKETLEFADSLVAVTRVVGRA
Ga0209580_103358591	3300027842	Surface Soil	LNYTEQQTHSPEILNELNPQELLQRIHAAETAIFSRLQGMRMTSIDLVEGQAIQDALDCLVRLTKETLEFADSLVEVTRIAGRSWA
Ga0209579_100113702	3300027869	Surface Soil	MNDLEHSEQQTHSPDTLTELSPQELLQRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDCLVRLTKETLEFADSLVEVTRVAGEAWA
Ga0209275_101980141	3300027884	Soil	GVVMNDLKHSQQQTHSPETLTELSPQELLQRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDCLVRLTKETLEFADSLVEVTRVGGRAWA
Ga0209380_101488621	3300027889	Soil	MNELEHSEQQTHSPDTLTELSPQELLQRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDCLVRLTKETLEFADSLVEVTRVGGRAWA
Ga0209380_102030572	3300027889	Soil	MNDPNYPEQKTYSPETLSELNPQELLQQIHAAETAIFWRLQGMRTSSIELVEGQVIQDALDGLLRLSKETLEFADSLVEVTRAAGRAWA
Ga0209380_103100591	3300027889	Soil	MNDLKYPEQQTHSPETLTDLNPQELLQKIHAAEPAISLRLQGMRISSLDLLEGRAIQDALDGLMHLTKETLEFADSLVEVTRVAGRAWA
Ga0209380_104170971	3300027889	Soil	MNDLKYPERQTHSPETLTELNPQELLQRIHAAETAIFWRLQGMRTSSIELVEGQAIQDALDGLLRLSKETLEFADSLIEVTRVAGRAWA
Ga0209380_107082422	3300027889	Soil	MKDLKYSEQQTQSPETLTELNPQELLQRIHAAETAILSRLQGMRINSIDLVEGQAIQDALDCLVRLTKDTLEFADS
Ga0209624_100038104	3300027895	Forest Soil	MNDAKSSEWQMRSPETLTELNPQELVQRIHAAETAIFLRLQGMRISSVDLEEGQAIQDALDGLMHLTKETLEFADSLVEVTRVAGRAWA
Ga0209624_105777281	3300027895	Forest Soil	MNDLKYPERQTHSPETLTELSPQELLQRIHAAETAIFLRLQGMRINSIDLVEGQAIQDALDCLVRLTKETLEFADSLVEVTRVAGRAWA
Ga0265357_10114262	3300028023	Rhizosphere	MNDRGHPEQQTHCPETLTELSPQELLQRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDCLVRLTKETLEFAASLVEVTRVGGRAWA
Ga0209526_107940721	3300028047	Forest Soil	MDDEKYPESQTPSPEPLRDLNPEQLVQRIRAAEEAIFSRLQRMRTNSIELLEGQAIQDALDGLLRLTKDTLEFAD
Ga0308309_103351943	3300028906	Soil	MNDLRHSEHQTHSPEILTELNPQELLQRIQAAETEIFSRLQGMRISSIELVEGQAIQDALDCLVRLTKDTLEFADSLVEVTRVAGRAWA
Ga0308309_110898752	3300028906	Soil	SPETLAELNPQQLIQRIQAAETAIFCRLQGMRLSSIELVEGQAIQDALDCLVRLTKETLEFADSLFEVTRAAGRAWA
Ga0310686_1064106862	3300031708	Soil	MNSLECSERQTHSREPLTELNPQELVQRIQAAETAIFLRLQGMRISSIDLMEGQAIQDALDGLLRLSKETLEFADSLIEVTRVAGRAWA
Ga0310686_1167693812	3300031708	Soil	MNDAINSERQMRSPETLTELNPQELVQRIHAAETAIFLRLQGMRISSVDLEEGQAIQDALDGLMHLTKETLEFADSLVEVTRVAGRAWA
Ga0307476_104161443	3300031715	Hardwood Forest Soil	MNDLGHPEQQTHCPETLTELSPQELLLRIHAAETAIFSRLQGMRISSIDLVEGQAIQDALDCLVRVTKETLEFADSLVEVTRAAGRAW
Ga0307475_107427332	3300031754	Hardwood Forest Soil	MNDLKYSERQTHSPETMTDLNPQELLQRIHAAETAIFWRLQGMRTSSIELVEGQAIQDALDGLLRLSKETLEFGDSLVEVTRAAGRAWA
Ga0307478_103134682	3300031823	Hardwood Forest Soil	MSDRKYPESQTLFPETLRDLNPEQLVQRIRAAEEAIFARLQGMRTNSIELLEGQAIQDALDGLLRLTKETLEFADSLLEVTRAMETAWA
Ga0307472_1007866212	3300032205	Hardwood Forest Soil	MNDPKYSQRQAYSPETLTELSSQELLQRIHAAETEIFSRLQRMRINSIELVEGQAIQDALDGLMRLTKETLEFADSFVEVNSRHRQSLGL

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060217

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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