NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F060260

Metagenome / Metatranscriptome Family F060260

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F060260
Family Type Metagenome / Metatranscriptome
Number of Sequences 133
Average Sequence Length 71 residues
Representative Sequence VSRPLKVQIVERARELIADEQFWCRRHFGEDVNGFAVSPTSASAVKRCGLGAVIAAAYQLTHNADAA
Number of Associated Samples 118
Number of Associated Scaffolds 133

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 87.79 %
% of genes near scaffold ends (potentially truncated) 91.73 %
% of genes from short scaffolds (< 2000 bps) 95.49 %
Associated GOLD sequencing projects 111
AlphaFold2 3D model prediction Yes
3D model pTM-score0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (81.203 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(9.774 % of family members)
Environment Ontology (ENVO) Unclassified
(33.835 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(55.639 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 46.32%    β-sheet: 2.11%    Coil/Unstructured: 51.58%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.62
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 133 Family Scaffolds
PF09361Phasin_2 57.89
PF00072Response_reg 11.28
PF17200sCache_2 3.01
PF02735Ku 0.75

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 133 Family Scaffolds
COG1273Non-homologous end joining protein Ku, dsDNA break repairReplication, recombination and repair [L] 0.75

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms81.20 %
UnclassifiedrootN/A18.80 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000881|JGI10215J12807_1126248Not Available545Open in IMG/M
3300000891|JGI10214J12806_10822115Not Available778Open in IMG/M
3300000955|JGI1027J12803_102420640Not Available653Open in IMG/M
3300000955|JGI1027J12803_104629639Not Available563Open in IMG/M
3300000956|JGI10216J12902_121096382Not Available919Open in IMG/M
3300001139|JGI10220J13317_13019414Not Available537Open in IMG/M
3300001915|JGI24741J21665_1036686Not Available726Open in IMG/M
3300001976|JGI24752J21851_1043648Not Available603Open in IMG/M
3300001989|JGI24739J22299_10098436All Organisms → cellular organisms → Bacteria → Proteobacteria884Open in IMG/M
3300004156|Ga0062589_102762274All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium512Open in IMG/M
3300004157|Ga0062590_101998867All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium601Open in IMG/M
3300004463|Ga0063356_105358316All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales551Open in IMG/M
3300004643|Ga0062591_102094482All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium586Open in IMG/M
3300005294|Ga0065705_10638653All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales674Open in IMG/M
3300005294|Ga0065705_10721396All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales643Open in IMG/M
3300005295|Ga0065707_10455249All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales777Open in IMG/M
3300005330|Ga0070690_100726665All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales765Open in IMG/M
3300005332|Ga0066388_100430051All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1963Open in IMG/M
3300005332|Ga0066388_104281475All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales727Open in IMG/M
3300005334|Ga0068869_100617057All Organisms → cellular organisms → Bacteria → Proteobacteria917Open in IMG/M
3300005339|Ga0070660_101049407All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales689Open in IMG/M
3300005365|Ga0070688_101260603All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. 99595Open in IMG/M
3300005367|Ga0070667_100588652All Organisms → cellular organisms → Bacteria1024Open in IMG/M
3300005437|Ga0070710_10031942All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium2847Open in IMG/M
3300005438|Ga0070701_10141953All Organisms → cellular organisms → Bacteria → Proteobacteria1374Open in IMG/M
3300005457|Ga0070662_101412507Not Available600Open in IMG/M
3300005468|Ga0070707_101759896All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. 99587Open in IMG/M
3300005535|Ga0070684_100084821All Organisms → cellular organisms → Bacteria → Proteobacteria2808Open in IMG/M
3300005544|Ga0070686_100489289All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales953Open in IMG/M
3300005544|Ga0070686_101017798Not Available680Open in IMG/M
3300005549|Ga0070704_100682407All Organisms → cellular organisms → Bacteria → Proteobacteria909Open in IMG/M
3300005564|Ga0070664_101670389All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium604Open in IMG/M
3300005615|Ga0070702_100686779All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales779Open in IMG/M
3300005713|Ga0066905_101526536All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales609Open in IMG/M
3300005719|Ga0068861_101916066All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales590Open in IMG/M
3300005764|Ga0066903_104706335All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium726Open in IMG/M
3300005764|Ga0066903_108324040All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium530Open in IMG/M
3300005842|Ga0068858_100165916All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2081Open in IMG/M
3300005842|Ga0068858_102242040All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. 99540Open in IMG/M
3300005843|Ga0068860_100192995All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1971Open in IMG/M
3300006173|Ga0070716_101558383All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales542Open in IMG/M
3300006196|Ga0075422_10247809Not Available748Open in IMG/M
3300006237|Ga0097621_100968985All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales795Open in IMG/M
3300006358|Ga0068871_101786538All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales584Open in IMG/M
3300006852|Ga0075433_10359868All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1285Open in IMG/M
3300006854|Ga0075425_101245450All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales844Open in IMG/M
3300006854|Ga0075425_102931454All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales523Open in IMG/M
3300006871|Ga0075434_101725792All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales634Open in IMG/M
3300006904|Ga0075424_102541769All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales536Open in IMG/M
3300009093|Ga0105240_10451410All Organisms → cellular organisms → Bacteria → Proteobacteria1439Open in IMG/M
3300009094|Ga0111539_11235547All Organisms → cellular organisms → Bacteria → Proteobacteria867Open in IMG/M
3300009100|Ga0075418_12138505All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales610Open in IMG/M
3300009147|Ga0114129_11017653All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium1042Open in IMG/M
3300009162|Ga0075423_10543444All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium1223Open in IMG/M
3300009162|Ga0075423_11811475All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium658Open in IMG/M
3300009174|Ga0105241_12553453All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. 99512Open in IMG/M
3300009176|Ga0105242_10873756All Organisms → cellular organisms → Bacteria → Proteobacteria897Open in IMG/M
3300009807|Ga0105061_1102037All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. 99504Open in IMG/M
3300010048|Ga0126373_11353015Not Available778Open in IMG/M
3300010166|Ga0126306_10451442All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. 991011Open in IMG/M
3300010375|Ga0105239_11946237All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. 99682Open in IMG/M
3300010376|Ga0126381_101742602Not Available900Open in IMG/M
3300010397|Ga0134124_10887283All Organisms → cellular organisms → Bacteria → Proteobacteria897Open in IMG/M
3300010397|Ga0134124_13195788All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. 99502Open in IMG/M
3300010399|Ga0134127_11592253All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales727Open in IMG/M
3300010401|Ga0134121_11225509All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria751Open in IMG/M
3300011119|Ga0105246_10685449All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales896Open in IMG/M
3300012883|Ga0157281_1044126All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales663Open in IMG/M
3300012883|Ga0157281_1078439Not Available562Open in IMG/M
3300012899|Ga0157299_10145108All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales665Open in IMG/M
3300012907|Ga0157283_10171632All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales659Open in IMG/M
3300012908|Ga0157286_10238981All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales634Open in IMG/M
3300012964|Ga0153916_12659579Not Available564Open in IMG/M
3300013102|Ga0157371_11322051All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales558Open in IMG/M
3300013297|Ga0157378_11373042All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales749Open in IMG/M
3300013307|Ga0157372_12466121All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales597Open in IMG/M
3300013308|Ga0157375_12145991All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales665Open in IMG/M
3300014325|Ga0163163_12530663All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales571Open in IMG/M
3300015200|Ga0173480_10935391All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium566Open in IMG/M
3300015373|Ga0132257_102491778All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales672Open in IMG/M
3300017792|Ga0163161_10730073All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales827Open in IMG/M
3300018056|Ga0184623_10348396All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium663Open in IMG/M
3300019279|Ga0184642_1063047All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales619Open in IMG/M
3300019279|Ga0184642_1323450All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales637Open in IMG/M
3300019356|Ga0173481_10025518All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1844Open in IMG/M
3300019361|Ga0173482_10066423Not Available1221Open in IMG/M
3300019362|Ga0173479_10743540Not Available535Open in IMG/M
3300020077|Ga0206351_10931110All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium790Open in IMG/M
3300020078|Ga0206352_10943665All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales564Open in IMG/M
3300020080|Ga0206350_10523536All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales604Open in IMG/M
3300020610|Ga0154015_1220901All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium697Open in IMG/M
3300022899|Ga0247795_1091277Not Available538Open in IMG/M
3300023057|Ga0247797_1071805All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium519Open in IMG/M
3300024055|Ga0247794_10089012All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales904Open in IMG/M
3300025885|Ga0207653_10208003All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales739Open in IMG/M
3300025898|Ga0207692_10133977All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1402Open in IMG/M
3300025905|Ga0207685_10109782All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium1194Open in IMG/M
3300025911|Ga0207654_10782130All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium facile689Open in IMG/M
3300025916|Ga0207663_10249436All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1306Open in IMG/M
3300025920|Ga0207649_10580936All Organisms → cellular organisms → Bacteria → Proteobacteria860Open in IMG/M
3300025932|Ga0207690_10297868All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1261Open in IMG/M
3300025932|Ga0207690_11583544Not Available548Open in IMG/M
3300025934|Ga0207686_10397175All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium1049Open in IMG/M
3300025934|Ga0207686_11578305All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales542Open in IMG/M
3300025935|Ga0207709_11207912All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales623Open in IMG/M
3300025942|Ga0207689_10134698All Organisms → cellular organisms → Bacteria → Proteobacteria2034Open in IMG/M
3300026041|Ga0207639_11362874All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales666Open in IMG/M
3300026067|Ga0207678_11736758All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales547Open in IMG/M
3300026078|Ga0207702_12500663All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. 99503Open in IMG/M
3300026088|Ga0207641_11201235Not Available758Open in IMG/M
3300026884|Ga0207455_1004601All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. 99672Open in IMG/M
3300027873|Ga0209814_10145228All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1017Open in IMG/M
3300027907|Ga0207428_11197853All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales528Open in IMG/M
3300027993|Ga0247749_1039883All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales555Open in IMG/M
3300030006|Ga0299907_10404034Not Available1097Open in IMG/M
3300030619|Ga0268386_10662695All Organisms → cellular organisms → Bacteria → Proteobacteria687Open in IMG/M
3300030993|Ga0308190_1053730All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales785Open in IMG/M
3300031229|Ga0299913_11052102All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales778Open in IMG/M
3300031561|Ga0318528_10581848Not Available601Open in IMG/M
3300031573|Ga0310915_10330553All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium facile1079Open in IMG/M
3300031847|Ga0310907_10150993All Organisms → cellular organisms → Bacteria1067Open in IMG/M
3300031854|Ga0310904_10427114All Organisms → cellular organisms → Bacteria874Open in IMG/M
3300031879|Ga0306919_10706168Not Available777Open in IMG/M
3300031912|Ga0306921_11439822All Organisms → cellular organisms → Bacteria756Open in IMG/M
3300031943|Ga0310885_10106057All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1283Open in IMG/M
3300031943|Ga0310885_10275510All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium861Open in IMG/M
3300032000|Ga0310903_10177728All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales981Open in IMG/M
3300032075|Ga0310890_10336007All Organisms → cellular organisms → Bacteria1099Open in IMG/M
3300032076|Ga0306924_12268207All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium facile551Open in IMG/M
3300032174|Ga0307470_11380086All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium581Open in IMG/M
3300032261|Ga0306920_100514285All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium1776Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere9.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil9.02%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.52%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere5.26%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.51%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil4.51%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil4.51%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.76%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.76%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.76%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.01%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere3.01%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.01%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.01%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere3.01%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere3.01%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere3.01%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere2.26%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.50%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.50%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.50%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.50%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere1.50%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.50%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.50%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.75%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.75%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.75%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.75%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.75%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.75%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.75%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.75%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.75%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.75%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.75%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.75%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000881Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soilEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001139Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soilEnvironmentalOpen in IMG/M
3300001915Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7Host-AssociatedOpen in IMG/M
3300001976Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7Host-AssociatedOpen in IMG/M
3300001989Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5Host-AssociatedOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006196Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1Host-AssociatedOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009807Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012883Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1EnvironmentalOpen in IMG/M
3300012899Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2EnvironmentalOpen in IMG/M
3300012907Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1EnvironmentalOpen in IMG/M
3300012908Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1EnvironmentalOpen in IMG/M
3300012964Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaGEnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300019279Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300020077Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020080Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020610Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022898Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5EnvironmentalOpen in IMG/M
3300022899Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S016-104C-6EnvironmentalOpen in IMG/M
3300023057Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S136-409B-6EnvironmentalOpen in IMG/M
3300024055Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6EnvironmentalOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026884Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05K5-12 (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027993Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S199-509C-5EnvironmentalOpen in IMG/M
3300030006Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67EnvironmentalOpen in IMG/M
3300030619Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)EnvironmentalOpen in IMG/M
3300030993Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031229Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38EnvironmentalOpen in IMG/M
3300031561Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300032000Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10215J12807_112624823300000881SoilVSRPLKVQIVERARELIADEQFWCRRHFGEDVNGFAVSPTSASAVKRCGLGAVIAAAYQLTHNADAAYQVGY
JGI10214J12806_1082211513300000891SoilMSRPLKVQIVERARELVADEQNWCQRHLAQDVNGASVSPTSTAAVKRCGLGAVIAAAYQLTHDYDAAHRLGHEALRPHYSPAT
JGI1027J12803_10242064013300000955SoilMSRPLKVQIVERARELVADEQNWCQRHLAQDVNGASVSPTSTAAVKRCGLGAVIAAAYQLTHDY
JGI1027J12803_10462963913300000955SoilLSRPLKIQIVERARVLIADEQNWCNHHLAEVNGVIVSPTSASAVKRCGLGALIAAAYQFTHDLDAAS
JGI10216J12902_12109638233300000956SoilMSRPLKVHIVERARELIADEQHWCRHHLGEDVNGVAVSATSAKAVKRCGLGAVIAAA
JGI10220J13317_1301941413300001139SoilVSRPLKVQIVQRARELILDEQHWCRRHLAEVNGVTVSPTSASAVKRCGLGALIAAAYQLTQDLNAAYQLGHEALRP
JGI24741J21665_103668623300001915Corn RhizosphereMSRPLKVQIVERARELVADEQNWCQRHLAQDVNGASVSPTSTAAVKRCGLGAVIAAAYPLTHDYDAA
JGI24752J21851_104364823300001976Corn, Switchgrass And Miscanthus RhizosphereMSRPLKVQIVERARELVADEQNWCQRHLAQDVNGASVSPTSTAAVKRCGLGAVIAAAYPLTHDYDAAHRL
JGI24739J22299_1009843623300001989Corn RhizosphereLSRPLKIQIVERARELIADEQHWCRRHFGEDAHGFPVSPTSPSAIKWCGLGAVIAAAYQLTHNADAAYQVGYQVLRPRYGSATL
Ga0062589_10276227413300004156SoilLSKPLNIQIVERARTLIADEQHWCRRRLAEDGNGVSVSPTSVGAVKRCGLGAMIAAAYELTHDFDA
Ga0062590_10199886713300004157SoilMSRPLKLLIVEAARELIADEQHWCRHHLAQEVNGVSVSPTSARAVKRCGLGARIAA
Ga0063356_10535831623300004463Arabidopsis Thaliana RhizosphereVSRPLKVQIVQRARELILDEQHWCRRHLAEVNGVTVSPTSASAVKRCGLGALIAAAYQLTQDLNAAYQLGHEALRPRYGPRHSHSRQ*
Ga0062591_10209448213300004643SoilVSRPLKIQIVERARELIADEQHWCRHHLGEDVNGVAVSATSAKAVKRCGLGAVIAAAYQLGQDY
Ga0065705_1063865313300005294Switchgrass RhizosphereMSRPLKLQIVERARELIADEQFWCRRHFGEDVNGFAVSPTSASAEKRCGLGAVIAAAYQLTHNADAAYQVGYQALRPRYGATTL
Ga0065705_1072139613300005294Switchgrass RhizosphereLSRPLKVQIAERARDLIADEQHWCRRHLALDANGVVVSPTSARAVKRCGLGAVIAAAYQLTHDYNTAHQLCHEALG
Ga0065707_1045524923300005295Switchgrass RhizosphereLSRPLKVQIAERARDLIADEQHWCRRHLALDANGVVVSPTSARAVKRCGLGAVIAAAYQLTHDYNTAHQLCHEALGP
Ga0070690_10072666523300005330Switchgrass RhizosphereMSRPLKLQIVERARELIADEQFWCRRHFGEDVNGFAVSPTSASAVKRCGLGAVIAAAYQLTHNADAAYQVGYQVLRPRYGSATL
Ga0066388_10029516653300005332Tropical Forest SoilLSRPLKVQVVELARALIADEQHWCRRHLAEVNGVTVSPTSASAVKRCGLGALIAA
Ga0066388_10043005133300005332Tropical Forest SoilLSKPLKIQVVELARGLIADEQHWCRHNLALDKNGIVVTPTSTLAVMRCALDALIAAANQLTHDFDVAYKLGHQVPRSDYFLAGKRL*
Ga0066388_10428147523300005332Tropical Forest SoilMSRRLKIHILERARALIAEQHWCRRHLAEDVNGVSVSPTSASAAKWCGLGAVIAAAYQLTHDFDAADQLGR*
Ga0068869_10061705723300005334Miscanthus RhizosphereLSRPLKIQIVERARELIADEQHWCRRHFGEDAHGFPVSPTSPSAIKWCGLGAVIAAAYQL
Ga0070660_10104940713300005339Corn RhizosphereLSKPLNIQIVERARTLIADEQHWCRRRLAEDGNGVSVSPTSVGAVKRCGLGAM
Ga0070688_10126060313300005365Switchgrass RhizosphereLSRPLKIQIVERARELIADEQHWCRRHFGEDAHGFPVSPTSPSAIKWCGLGAVIAAAYQ
Ga0070667_10058865213300005367Switchgrass RhizosphereLSRPLKIQIVERARELIADEQHWCRRHFGEDAHGFPVSPTSPSAIKWCGLGAVIAAAYQLTHN
Ga0070710_1003194263300005437Corn, Switchgrass And Miscanthus RhizosphereMSRPLKVQIVERARELVADEQNWCQRHLAQDVNGASVSPTSTAAVKRCGLGAVIAAAY
Ga0070701_1014195323300005438Corn, Switchgrass And Miscanthus RhizosphereLSRPLKIQIVERARELIADEQHWCRRHFGEDAHGFPVSPTSPSAIKWCGLGAVIAAAYQLTHNADAAYQVGYQVLRPRYGSATLIH
Ga0070662_10141250723300005457Corn RhizosphereRPLKVQIVQRARELILDEQHWCRRHLAEVNGVTVSPTSASAVKRCGLGALIAAAYQLTQDLNAAYQLGHEALRPRYGPRHSHSRQ*
Ga0070707_10175989613300005468Corn, Switchgrass And Miscanthus RhizosphereLSRPLKIQIVERARELIADEQHWCRRHFGEDAHGFPVSPTSPSAIKWCGLGAVIAAAYQLTHDFDG*
Ga0070684_10008482153300005535Corn RhizosphereLSRPLKIQIVERARELIADEQHWCRRHFGEDAHGFPVSPTSPSAIKWCGLGAVIAAAY
Ga0070686_10048928933300005544Switchgrass RhizosphereMSRPLKLQIVERARELIADEQFWCRRHFGEDVNGFAVSPTSASAVKRCGLGAVIAAAYQLTHNADAA
Ga0070686_10101779813300005544Switchgrass RhizosphereLSRPLQVQIVERARELIVDEQHWCRSHLALDKNGVVVSPTSAKAVKRCGLGAVIAAAYQLTQDYD
Ga0070704_10068240713300005549Corn, Switchgrass And Miscanthus RhizosphereLSRPLKIQIVERARELIADEQHWCRRHFGEDAHGFPVSPTSPSAIKWCGLGAVIAAAYQLTHNA
Ga0070664_10167038913300005564Corn RhizosphereMSRPLKLQIVERARELIADEQFWCRRHFGEDVNGFAVSPTSATAVKRCGLGAVIAAAYQLTHNADAAYQVGYQVLRPRYGSATLIH
Ga0070702_10068677913300005615Corn, Switchgrass And Miscanthus RhizosphereMSRPLKLHIVERAPELIADEQFWCRRHFGEDVNGFAVSPTSASAVKRCGLGAVIAAAYQLTHNADAAYQVGYQVLRPRYGSATLIHV
Ga0066905_10152653613300005713Tropical Forest SoilMARPLKLQIVERARTLIADEQHWCRRNLANEVNGVPIDPTSDRAVKWCGLGAVIAAAYQ
Ga0068861_10191606623300005719Switchgrass RhizosphereLSRPLKVQIVERARTLIADEKHWCRRHLAEDKNGVSPTSGSVVKRCGLGAVIAAAY
Ga0066903_10470633523300005764Tropical Forest SoilLSKPLKIKIVARARALIADEQHWCPRHLAEDVNGVSVSPTSTSAVKRCGLGAVIAAAYQLTHDFDAADRLGYEALRPRYG
Ga0066903_10832404023300005764Tropical Forest SoilVSRPLKVQIVERARELIADKQHWCCRHFGEDENGFPVSPTSPSAIKLCGLGAMIAAAYQLTHNADAAYQVGYQVLRPRYG
Ga0068858_10016591613300005842Switchgrass RhizosphereMSRPLKLQIVERARELIADEQFWCRRHFGEDVNGFAVSPTSAGAVKRCGLGAVIAAAYELTNDYDAAYQVGYQALRPRY
Ga0068858_10224204013300005842Switchgrass RhizosphereLSRPLKIQIVERARTLIADEKHWCRRHLAEDKNGVSPTSGSVVKRCGLGAVIAAAY
Ga0068860_10019299543300005843Switchgrass RhizosphereMSRPLKVQIVERARELVADEQNWCQRHLAQDVNGASVSPTSTAAVKRCGLGAVIAAAYQLTHDYDAAHRLGHEALRPHYS
Ga0070716_10155838323300006173Corn, Switchgrass And Miscanthus RhizosphereMSRPLKLQIVERARELIADEQFWCRRHFGEDVNGFAVSPTSASAVKRCGLGAVIAAAYQLTHNADAAYQVGYQVLRPRYGSATLIH
Ga0075422_1024780913300006196Populus RhizosphereLSRPLQVQIVERARELIVDEQHWCRSHLALDKNGVVVSPTSAKAVKRCGLGAVIAAAYQLTQD
Ga0097621_10096898513300006237Miscanthus RhizosphereMSRPLKVQIVERARELVADEQNWCQRHLAQDVNGASVSPTSTAAVKRCGLGAVIAAAYQLTHDYDAAHRLG
Ga0068871_10178653813300006358Miscanthus RhizosphereLSRPLKVQIVERARTLIADEKHWCRRHLAEDKNGVSPTSGSVVKRCGLGAVIAAAYELTNDYDAAHLLGHEVLRPH
Ga0075433_1035986813300006852Populus RhizosphereLSRPLQVQIVERARELIVDEQHWCRSHLALDKNGVVVSPTSAKAVKRCGLGAVIAAAYQLTQDY
Ga0075425_10124545013300006854Populus RhizosphereMSRPLKLQIVEAARILIADEQHWCRRHLAEDVNGVSVSPTSASAVKRCGLGAVIAAAYELTNDYDAAH
Ga0075425_10293145413300006854Populus RhizosphereLSRSLKFQIVEQARALIADEKHWSRHHLGEDVNGLAVSTTSAKAVKRCGLGAVIAAAYQLTHDYDAAH
Ga0075434_10172579223300006871Populus RhizosphereMSRPLKLQIVEAARILIADEQHWCRRHLAEDVNGVSVSPTSASAVKRCGLGAVIAAAYELTNDYDAAHLLG
Ga0075424_10254176923300006904Populus RhizosphereVSRPLKVQIVQRARELILDEQHWCRRHLAEVNGVTVSPTSASAVKRCGLGALIAAAYQLTQDLNAA
Ga0105240_1045141013300009093Corn RhizosphereLSRPLKIQIVERARELIADEQHWCRRHFGEDANGFPVSPTSASAIKWYGLGAVIAAAYQLTHNADAAYQVGYQV
Ga0111539_1123554723300009094Populus RhizosphereLSRPLKIQIVERARELIADEQHWCRRHFGEDAHGFPVSPTSPSAIKWCGLGAVIAAAYQLTHNADAAYQVGYQVL
Ga0075418_1213850523300009100Populus RhizosphereMSRPLKLQIVEAARILIADEQHWCRGHLAQDASGVAVSPRSARAAKRCGLGAVIAAADQLTHDFD
Ga0114129_1101765333300009147Populus RhizosphereVSRPLKIQIVERARELIADEQHWCRHHLGEDVNGVAVSATSAKAVKRCGLGAVIAAAYELTHDYDAAHLLGH
Ga0075423_1054344423300009162Populus RhizosphereMARPLKLQIVERARTLIADKQHWCRGHLAQDARGAAVSPRSASAVKRCGLGAVIAAADQL
Ga0075423_1181147513300009162Populus RhizosphereMSRPLKVQIVERARELVADEQNWCQRHLAQDVNGASVSPTSIAAVKRCGLGAVIAAAYQLTHDYDAAHRLGQEAFRPH*
Ga0105241_1255345313300009174Corn RhizosphereLSRPLKIQIVERARELIADEQHWCRRHFGEDAHGFPVSPTSPSAIKWCGLGAVIAAAYQLTHNADA
Ga0105242_1087375613300009176Miscanthus RhizosphereLSRPLQVQIVERARELIVDEQHWCRSHLALDKNGVVVSPTSAKAVKRCGLGAVI
Ga0105061_110203713300009807Groundwater SandMAKPLQVQIVEKARALIADEQHWCRGLLAQDASGASVLATSASAVKRCGLGAVVAAAYQLTHDFDAANELAHNALRPRYGVAT
Ga0126373_1135301513300010048Tropical Forest SoilLSKPLKIQIVERARVLIADEEHWCRRHFAEDANGFPVSATSASAIKWCGLGAMIAAAYQLTHNTDAAYQVGYQILRPRYGSATLIH
Ga0126306_1045144213300010166Serpentine SoilMAKPLQFQIVERARALVADEQHWCRGVLAQDASGASVLATSASAVKRCGLGAVIAAAYQLTHDFDAANELAHKALRQACIYHRVICGGF*
Ga0105239_1194623713300010375Corn RhizosphereLSRPLKIQIVERARELIADEQHWCRRHFGEDAHGFPVSPTSPSAIKWCGLGAVIAAAYQLTHNADAAYQ
Ga0126381_10174260213300010376Tropical Forest SoilLSKPLKIQIVERARVLIADEEHWCRRHFAEDANGFPVSATSASAIKWCGLGAMIAAAYQLTHNTDAA
Ga0134124_1088728323300010397Terrestrial SoilLSRPLKIQIVERARELIADEQHWCRRHFGEDAHGFPVSPTSPSAIKWCGLGAVIAAAYQLTHNADAAY
Ga0134124_1319578813300010397Terrestrial SoilLSRPLKVQIVQRARALIADEQHWCRRHLGEDVNGVAVSATSANAVKRCTLGALIAAAYQLTHDY
Ga0134127_1159225313300010399Terrestrial SoilVSRPLKVQIVERARELIADEQFWCRRHFGEDVNGFAVSPTSASAVKRCGLGAVIAAAYQLTHNADAAYQVGYQVLRPRYGSATLIH
Ga0134121_1122550913300010401Terrestrial SoilLSRPLKVQIVERARTLIADEKHWCRRHLAEDKNGVSPTSGSVVKRCGLGAVI
Ga0105246_1068544913300011119Miscanthus RhizosphereVSRPLKVQIVERARELIADEQFWCRRHFGEDVNGFAVSPTSASAVKRCGLGAVIAAAYQLTHNADAA
Ga0157281_104412613300012883SoilVSRPLKVQIVERARELIADEQFWCRRHFGEDVNGFAVSPTSASAVKRCGLGAVIAAAYQLTHNADAAYQVGYQV
Ga0157281_107843923300012883SoilLSRPLKVQIVERARGLIANEQHWCRHHLALDNNGVVVSPTSSLAVKRCGLGAVIAAAYELTHDYD
Ga0157299_1014510823300012899SoilVSRPLKVQIVERARELIVDEQFWCRRHFGEDVNGFAVSPTSASAVKRCGLGAVIAAAHNSHITPMPLTK*
Ga0157283_1017163213300012907SoilVSRPLKVQIVERARELIADEQFWCRRHFGEDVNDFAVSPTSASAVKRCGLGAVIAAAYQLTHNADAAYQVGYQVLRPRYGSATLIHV
Ga0157286_1023898123300012908SoilVSRPLKVQIVERARELIADEQFWCRRHFGEDVNGFAVSPTSASAVKRCGLGAVIAAAYQLTHNADAAYQV
Ga0153916_1265957923300012964Freshwater WetlandsMARPLQLEIVERARRLIANEQHWCRGQLAEDARGRIVFPTSANAVRRCGLGAVIAA
Ga0157371_1132205123300013102Corn RhizosphereMSRPLKLQIVERARELIADEQFWCRRHFGEDVNGFAVSPTSASAVKRCGLGAVIAAAYQLTHNADAAYQVGYQVLRPRYGSATLIHI
Ga0157378_1137304213300013297Miscanthus RhizosphereMSRPLKLQIVERARELIANEQFWCRRHFGEDVNGFAVSPTSASAVKRCGLGAVIAAAYQLTNDYDAAHLLGHEV
Ga0157372_1246612113300013307Corn RhizosphereVSRPLKVQIVERARELIADEQFWCRRHFGEDVNGFAVSPTSASAVKRCGLGAVIAAAYQLTHNADAAHQVGYQVLRPRYGSATLIHNQ*
Ga0157375_1214599123300013308Miscanthus RhizosphereLSRPLKVQIVERARTLIADEKHWCRRHLAEDKNGVSVSPTSGSVVKRCGLGAVITAAYEL
Ga0163163_1253066323300014325Switchgrass RhizosphereMSRPLKLQIVETTRALIADEQHWCRRHLAEDKNGVSVLPTSGSVVKRCGLGAVIAAAYQLTHNADAAYQVGYQVLRPRYG
Ga0173480_1093539123300015200SoilMSRPLKVQIVERARELVADEQNWCQRHLAQDVNGASVSPTSTAAVKRCGLGAVIAAAYQLTHDYDAAHRLGHEALRPHY
Ga0132257_10249177823300015373Arabidopsis RhizosphereMSRPLKVQIVERARQLIADEENWCQRHLALDVKWRCRVANFCQSVNRCGLGAVIAAAYQLTYDYDAGHRLGHE
Ga0163161_1073007323300017792Switchgrass RhizosphereVSRPLKVQIVQRARELILDEQHWCRRHLAEVNGVTVSPTSASAVKRCGLGALIAAAYQLTQDLNAAYQLGHEALRPRYGPRHSHSRQ
Ga0184623_1034839613300018056Groundwater SedimentMAKPLQVKIVEKARALIADEQHWCRGLLAQDASGASVLATSASAVKRCGLGAVIAAAYQLTHDYDAANELAHKALR
Ga0184642_106304723300019279Groundwater SedimentMSKPLKLQIVEQARPLIADESHWCRRHLAQDVNGVAVSPTSASAVKRCGLGAVIAA
Ga0184642_132345023300019279Groundwater SedimentMSKPLKLQIVEQARAVIADEHHWCRRHLAQDVNGVAVSPTSASAVRWCALGAVMAAAYQLTH
Ga0173481_1002551833300019356SoilMSRPLKVQIVERARQLIADEENWCQRHLALDVKGAVVSPTSVKAVKRCGLIAAAYQLTYDYDAG
Ga0173482_1006642313300019361SoilMSRPLKVQIVERARGLIANEQHWCRHHLDLDNNGVVVSPTSSLAVKRCGLGAVIAAA
Ga0173479_1074354023300019362SoilLSKPLKVQIAETARTLIADEQHWCRRHLAEVNGVTVSPTSASAVKRCGLGALIAAAYQLTQDLNAAYQLGHEALRPRYGPRHSHSRQ
Ga0206351_1093111023300020077Corn, Switchgrass And Miscanthus RhizosphereMSRPLKVQIVERARELVADEQNWCQRHLAQDVNGASVSPTSTAAVKRCGLGAVIAAAYPLTHDYDAAHRLG
Ga0206352_1094366523300020078Corn, Switchgrass And Miscanthus RhizosphereVSRPLKIQIVERARELIADEQFWCRRHFAEDVNGFAVSPTSASAVKRCGLGAVIAAAYQL
Ga0206350_1052353623300020080Corn, Switchgrass And Miscanthus RhizosphereMSRPLKLQIVERARELIADEQFWCRRHFGEDMNGFAVSPTSAGAVKRCGLGAVIAAAHQLTHNPDAAYQI
Ga0154015_122090113300020610Corn, Switchgrass And Miscanthus RhizosphereMSRPLKVQIVERARELVADEQNWCQRHLAQDVNGASVSPTSTAAVKRCGLGAVIAAAYPLTHDYDAAHRLGHEALRPHYSPATLIY
Ga0247745_102421113300022898SoilVSRPLKVQIVQRARELILDEQHWCRRHLAEVNGVTVSPTSASAVKRCGLGALI
Ga0247795_109127723300022899SoilVSPPLKVQIVERARELIADEQFWCRRHFGEDVNDFAVSPTSAGAVKRCGLGAVI
Ga0247797_107180523300023057SoilMSRPLKVQIVERARELVADEQNWCQRHLAQDVNGASVSPTSTAAVKRCGLGAVIAAAYPLTHDYDAAH
Ga0247794_1008901233300024055SoilMSRPLKVQIVERARGLIANEQHWCRHHLALGNNGVVVSPTSSLAVKRCGLGAVIAAAYQLTHDYDAAHQL
Ga0207653_1020800323300025885Corn, Switchgrass And Miscanthus RhizosphereMSRPLKVQIVERARELVADEQNWCQRHLAQDVNGASVSPTSTAAVKRCGLGAVIAAAYQLTHDYDAA
Ga0207692_1013397713300025898Corn, Switchgrass And Miscanthus RhizosphereLSRPLKIQIVERARELIADEQHWCRRHFGEDADGFPVSPTSPSAIKWCGLGAVIAAAYQLTHNADAAP
Ga0207685_1010978233300025905Corn, Switchgrass And Miscanthus RhizosphereMSRPLKVQIVERARELVADEQNWCQRHLAQDVNGASVSPTSTAAVKRCGLGAVIAAAYPLTHDYDAAHRLGHEALRPHYSP
Ga0207654_1078213013300025911Corn RhizosphereLSRPLKIQIVERARELIADEQHWCRRHFGEDAHGFPVSPTSPSAIKWCGLGVVIAAAYQLTHNADAAYQVGYQV
Ga0207663_1024943613300025916Corn, Switchgrass And Miscanthus RhizosphereVSRPLKVQIVEVARTLIADEQHWCRRHFGEDVSGFAVSPTSASAIKWCGLGALIAAAYQLTHNADAAYQVGYQVLRPRYG
Ga0207649_1058093613300025920Corn RhizosphereLSRPLKIQIVERARELIADEQHWCRRHFGEDAHGFPVSPTSPSAIKWCGLGAVIAAAYQLTHNADAAYQVG
Ga0207690_1029786813300025932Corn RhizosphereMSRPLKLQIVERARELIADEQFWCRRHFGEDVNGFAVSPTSASAVKRCGLGAVIAAAYQLTHNADAAYQVGYQVLRPRYGS
Ga0207690_1158354423300025932Corn RhizosphereLSRPLQVQIVERARELIVDEQHWCRSHLALDKNGVVVSPTSAKAVKRCGLGAVIAAAYQLTQDYDVAHQLGHEVLGAHYRAA
Ga0207686_1039717533300025934Miscanthus RhizosphereMSRPLKVQIVERARELVADEQNWCQRHLAQDVNGASVSPTSTAAVKRCGLGAVIAAAYQL
Ga0207686_1157830523300025934Miscanthus RhizosphereVSRPLKVQIVERARELIADEQFWCRRHFGEDVNGFAVSPTSASAVKRCGLGAVIAAAYQLTHNADAAYQIGYQALRPRYG
Ga0207709_1120791213300025935Miscanthus RhizosphereMSRPLKLQIVERARGLIADEQFWCRRHFGEDVNGFAVSPTSASAVKRCGLGAVIAAAYQLTHNADAAYQVGYQV
Ga0207689_1013469863300025942Miscanthus RhizosphereMSRPLKLQIVERARELIADEQFWCRRHFGEDVNGFAVSPTSASAVKRCGLGAVIAAAYQLTHNADAAYQVGYQVLR
Ga0207639_1136287413300026041Corn RhizosphereMSRPLKLQIVERARELIADEQFWCRRHFGEDVNGFAVSPTSASAVKRCGLGAVIAAAYQLTHNADAAYQVGYQV
Ga0207678_1173675813300026067Corn RhizosphereLSRPLKVQIVERARTLIADEKHWCRRHLAEDKNGVSPTSGSVVKRCGLGAVIAAAYELTNDYD
Ga0207702_1250066313300026078Corn RhizosphereLSRPLQVQIVERARELIVDEQHWCRSHLALDKNGVVVSPTSAKAVKRCGLGAVIA
Ga0207641_1120123523300026088Switchgrass RhizosphereLSRPLQVQIVERARELIVDEQHWCRSHLALDKNGVVVSPTSAKAVKRCGLGAVIAAAYQLTQDYDAAHQLGH
Ga0207455_100460113300026884SoilLSRPLKIQIVERARELIADEQHWCRRHFGEDAHGFPVSPTSPSAIKWCGLGAVIAAAYQLTHNADAAYQVGY
Ga0209814_1014522813300027873Populus RhizosphereMSRPLKVQIVERARGLIANEQHWCRHHLALDNNGVGVSPTPSLAVKRCGLGAV
Ga0207428_1119785323300027907Populus RhizosphereLSRSLKFQIVEQARALIADEKHWCRHHLGEDVNGLAVSTTSAKAVKRCGLGAVIAAAYQLTHDYDAAHRLGHEALRPRYGAAT
Ga0247749_103988323300027993SoilVSRPLKVQIVERARELIADEQFWCRRHFGEDVNGFAVSPTSASAVKRCGLGAVIAAAYQLTHNADAAYQVGYQVLRPRYGS
Ga0299907_1040403413300030006SoilMAKPLQLQIVEKARALIADEQHWCRGLLAQDASGASVFATSANVVKRCGLGAVIAAAYQLTHDFDAANELA
Ga0268386_1066269523300030619SoilMARPLNVQITEKARVLIADKQHWCRGHLVEDANGASVFPTSARAVRRCGLGALISAAYELTNNYDAAHELAHTALRPRCGISTLVH
Ga0308190_105373023300030993SoilMSRPLKLQIVEQARTLIADESHWCRRHLAQDVNGVAVSPTSASAVKRCGLGAVIAAAYQITHDFDAAHQLGHEALRP
Ga0299913_1105210223300031229SoilMSRPLKLQIVEQARSLIADEQHWCRDHMAEDASGASVFPTSASAVKRCGLGAVIAAAYQLTRDYDAANEL
Ga0318528_1058184813300031561SoilLSKSLKIQIVELARTLIADEQHWCRRHLAEDGNGVSVSPISSSAVKRCGLGAVIAAAYQL
Ga0310915_1033055313300031573SoilLSKSLKIQIVELARTLIADEQHWCRRHLAEDGNGVSVSPISSSAMKRCGLGAVIAAAYQLTHDFDTAHKLGHE
Ga0310907_1015099313300031847SoilLSRPLKIQIIERARELIADEQHWCRRHFGEDAHGFPVSPTSPSAIKWCGLGAVIAAAYQLTHNADAAYQVGYQVLRPRYGSA
Ga0310904_1042711413300031854SoilLSRPLKIQIIERARELIADEQHWCRRHFGEDAHGFPVSPTSPSAIKWCGLGAVIAAAYQLTHNADAAYQVGYQV
Ga0306919_1070616813300031879SoilLSKPLKIQIVEMARALIADEQHWCRRHLGEDVNGVSVSPTSASALKRCGLGAVIAAAYQL
Ga0306921_1143982223300031912SoilLSKPLKIQIVEKARAIIADEQNWCPRHLAEDVNGVSVSPTSAGAVKRCGLGAVIAAAYQL
Ga0310885_1010605713300031943SoilMSRPLKVQIVELARTLIADEQHWCRRHFGEDVSGFAVSPTSASAIKWCGLGALIAAAYQLTHNADAAYQVGYQVLRPRYGYATLI
Ga0310885_1027551023300031943SoilMSRPLKVQIVERARELVADEQNWCQRHLAQDVNGASVSPTSTAAVKRCGLGAVIAAAYPLTHEYDA
Ga0310903_1017772833300032000SoilMSRPLKVQIVERARELVADEQNWCQRHLAQDVNGASVSPTSTAAVKRCGLGAVIA
Ga0310890_1033600713300032075SoilLSRPLKIQIVERARELIADEQHWCRRHFGEDAHGFPVSPTSPSAIKWCGLGAVIAAAYQLTHNADAAYQV
Ga0306924_1226820713300032076SoilLSKSLKIQIVELARTLIADEQHWCRRHLAEDGNGVSVSPISSSAMKRCGLGAVIAAAYQLTHDFDTAHKLGHEVLAPIGGLVTLM
Ga0307470_1138008623300032174Hardwood Forest SoilMSRPLKVQIVERARELVADEQNWCQRHLALDVNGASVSPTSTAAVKRCGLGAVIAAAYQLTHNADAAYQVG
Ga0306920_10051428513300032261SoilLSKPLKIQIVEMARALIADEQHWCRRHLGEDVNGVSVSPTSASALKRCGLGAVIAAAYQLTHDFDAADRLGHEALRPRYG

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.