Metagenome / Metatranscriptome Family F060382

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060382
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	89 residues
Representative Sequence	MKRNVVLILLSYSVLGLTGIPVRAQETKPERETLVVEPGNDFRAALEKGVRLKAVGQPITAKLIEPVYAGEVLAIPAGSTIKGHV
Number of Associated Samples	90
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.24 %
% of genes near scaffold ends (potentially truncated)	99.25 %
% of genes from short scaffolds (< 2000 bps)	90.98 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.248 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (41.353 % of family members)
Environment Ontology (ENVO)	Unclassified (37.594 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.368 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 15.04% β-sheet: 19.47% Coil/Unstructured: 65.49%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF02518	HATPase_c	26.32
PF12852	Cupin_6	18.05
PF02321	OEP	8.27
PF00486	Trans_reg_C	2.26
PF07238	PilZ	0.75
PF00171	Aldedh	0.75
PF12704	MacB_PCD	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	16.54
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.75
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.75
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.25 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.25 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.25 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	73.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.50 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	59.40 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	13.53 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	59.40 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	13.53 %
Oceanospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales	0.75 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.75 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	59.40 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	13.53 %
Endozoicomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Endozoicomonadaceae	0.75 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.75 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	59.40 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	4.51 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.50 %
Endozoicomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Endozoicomonadaceae → Endozoicomonas	0.75 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.75 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	59.40 %
Granulicella mallensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	3.01 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.50 %
Endozoicomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Endozoicomonadaceae → Endozoicomonas	0.75 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.75 %
Unclassified	root	N/A	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001167\|JGI12673J13574_1011565	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300001545\|JGI12630J15595_10117136	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300005174\|Ga0066680_10761218	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300005434\|Ga0070709_11544595	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300005537\|Ga0070730_10148213	All Organisms → cellular organisms → Bacteria	1594	Open in IMG/M
3300005549\|Ga0070704_100867563	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300005921\|Ga0070766_10322275	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	997	Open in IMG/M
3300006028\|Ga0070717_10974838	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	772	Open in IMG/M
3300006163\|Ga0070715_10398586	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	764	Open in IMG/M
3300006173\|Ga0070716_100472783	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300006176\|Ga0070765_100466142	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1185	Open in IMG/M
3300007258\|Ga0099793_10045613	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1917	Open in IMG/M
3300007258\|Ga0099793_10257691	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	843	Open in IMG/M
3300007258\|Ga0099793_10485559	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300007258\|Ga0099793_10698057	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300007788\|Ga0099795_10288104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	719	Open in IMG/M
3300007788\|Ga0099795_10306143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	700	Open in IMG/M
3300009098\|Ga0105245_11793789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300009143\|Ga0099792_10579805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300009143\|Ga0099792_10877451	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300011269\|Ga0137392_10132528	All Organisms → cellular organisms → Bacteria	1999	Open in IMG/M
3300011269\|Ga0137392_10212821	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1584	Open in IMG/M
3300011270\|Ga0137391_10249757	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1538	Open in IMG/M
3300011271\|Ga0137393_10377541	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1213	Open in IMG/M
3300012202\|Ga0137363_10271578	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1384	Open in IMG/M
3300012203\|Ga0137399_10178423	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1713	Open in IMG/M
3300012203\|Ga0137399_10220213	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1547	Open in IMG/M
3300012205\|Ga0137362_10155347	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1958	Open in IMG/M
3300012205\|Ga0137362_10545354	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300012205\|Ga0137362_11132648	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300012362\|Ga0137361_11014036	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750	Open in IMG/M
3300012362\|Ga0137361_11503506	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300012363\|Ga0137390_10744996	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	940	Open in IMG/M
3300012363\|Ga0137390_11586618	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300012363\|Ga0137390_11951251	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300012582\|Ga0137358_11088471	Not Available	510	Open in IMG/M
3300012683\|Ga0137398_10255992	All Organisms → cellular organisms → Bacteria	1167	Open in IMG/M
3300012683\|Ga0137398_10583108	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300012917\|Ga0137395_10000875	All Organisms → cellular organisms → Bacteria	13307	Open in IMG/M
3300012918\|Ga0137396_11242499	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300012922\|Ga0137394_10527583	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1002	Open in IMG/M
3300012923\|Ga0137359_11317856	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300012925\|Ga0137419_10087172	All Organisms → cellular organisms → Bacteria	2127	Open in IMG/M
3300012925\|Ga0137419_10255677	All Organisms → cellular organisms → Bacteria	1322	Open in IMG/M
3300012925\|Ga0137419_10347753	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1146	Open in IMG/M
3300012927\|Ga0137416_10422472	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300012927\|Ga0137416_11460953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300012944\|Ga0137410_10487439	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1006	Open in IMG/M
3300013296\|Ga0157374_12635707	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300015053\|Ga0137405_1152781	All Organisms → cellular organisms → Bacteria	1460	Open in IMG/M
3300015054\|Ga0137420_1174648	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	858	Open in IMG/M
3300015264\|Ga0137403_11616863	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300018468\|Ga0066662_12145581	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300020199\|Ga0179592_10149099	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300020579\|Ga0210407_10047405	All Organisms → cellular organisms → Bacteria → Acidobacteria	3202	Open in IMG/M
3300020579\|Ga0210407_10064535	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2745	Open in IMG/M
3300020579\|Ga0210407_10456845	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	999	Open in IMG/M
3300020579\|Ga0210407_10716702	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	775	Open in IMG/M
3300020581\|Ga0210399_10075315	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2736	Open in IMG/M
3300020581\|Ga0210399_10616882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	896	Open in IMG/M
3300020583\|Ga0210401_10351144	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1336	Open in IMG/M
3300020583\|Ga0210401_10386350	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1262	Open in IMG/M
3300020583\|Ga0210401_10478591	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1108	Open in IMG/M
3300020583\|Ga0210401_10545794	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	1021	Open in IMG/M
3300021088\|Ga0210404_10035837	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2255	Open in IMG/M
3300021088\|Ga0210404_10287424	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300021170\|Ga0210400_10666468	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	856	Open in IMG/M
3300021170\|Ga0210400_11189140	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	614	Open in IMG/M
3300021178\|Ga0210408_11065820	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300021178\|Ga0210408_11151195	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300021407\|Ga0210383_10215269	All Organisms → cellular organisms → Bacteria	1645	Open in IMG/M
3300021420\|Ga0210394_10473441	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1102	Open in IMG/M
3300021432\|Ga0210384_10020659	All Organisms → cellular organisms → Bacteria	6342	Open in IMG/M
3300021475\|Ga0210392_11428952	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300021478\|Ga0210402_10953467	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	785	Open in IMG/M
3300021479\|Ga0210410_10356451	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300021479\|Ga0210410_11009640	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	721	Open in IMG/M
3300021479\|Ga0210410_11032355	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300021559\|Ga0210409_10315081	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1409	Open in IMG/M
3300024330\|Ga0137417_1262447	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2280	Open in IMG/M
3300025914\|Ga0207671_11426952	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300026304\|Ga0209240_1064881	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1364	Open in IMG/M
3300026304\|Ga0209240_1210129	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300026482\|Ga0257172_1012909	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1403	Open in IMG/M
3300026490\|Ga0257153_1067578	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300026494\|Ga0257159_1084138	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300026496\|Ga0257157_1071408	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300026507\|Ga0257165_1115502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300026514\|Ga0257168_1120307	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300026551\|Ga0209648_10175159	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	1666	Open in IMG/M
3300026555\|Ga0179593_1095473	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	4291	Open in IMG/M
3300026557\|Ga0179587_10978491	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300026557\|Ga0179587_11026120	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300026557\|Ga0179587_11066023	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300027047\|Ga0208730_1016543	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	820	Open in IMG/M
3300027069\|Ga0208859_1005503	All Organisms → cellular organisms → Bacteria	1350	Open in IMG/M
3300027070\|Ga0208365_1015216	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300027512\|Ga0209179_1131772	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	559	Open in IMG/M
3300027565\|Ga0209219_1101982	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300027587\|Ga0209220_1153362	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300027643\|Ga0209076_1086986	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300027681\|Ga0208991_1207217	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300027846\|Ga0209180_10143441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Endozoicomonadaceae → Endozoicomonas	1374	Open in IMG/M
3300027862\|Ga0209701_10031257	All Organisms → cellular organisms → Bacteria	3458	Open in IMG/M
3300027862\|Ga0209701_10062977	All Organisms → cellular organisms → Bacteria	2360	Open in IMG/M
3300027862\|Ga0209701_10066088	All Organisms → cellular organisms → Bacteria	2295	Open in IMG/M
3300027862\|Ga0209701_10188231	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300027875\|Ga0209283_10355236	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	961	Open in IMG/M
3300027903\|Ga0209488_10205948	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1481	Open in IMG/M
3300028047\|Ga0209526_10531145	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	762	Open in IMG/M
3300028536\|Ga0137415_11373186	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300028906\|Ga0308309_10325930	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1304	Open in IMG/M
3300029636\|Ga0222749_10074458	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1547	Open in IMG/M
3300029636\|Ga0222749_10289601	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	844	Open in IMG/M
3300029636\|Ga0222749_10513445	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300029636\|Ga0222749_10564017	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300031057\|Ga0170834_112932790	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300031128\|Ga0170823_16445428	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300031718\|Ga0307474_10596399	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300031720\|Ga0307469_11233728	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300031720\|Ga0307469_11821852	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300031753\|Ga0307477_10704619	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300031754\|Ga0307475_11332681	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300031823\|Ga0307478_11795770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300031962\|Ga0307479_11860370	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300031962\|Ga0307479_11976240	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300032174\|Ga0307470_10113178	All Organisms → cellular organisms → Bacteria	1584	Open in IMG/M
3300032180\|Ga0307471_100353815	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1580	Open in IMG/M
3300032180\|Ga0307471_100376121	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	1540	Open in IMG/M
3300032180\|Ga0307471_100467197	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1404	Open in IMG/M
3300032180\|Ga0307471_101300625	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300032180\|Ga0307471_103808336	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300032205\|Ga0307472_102282772	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.74%
Host-Associated	Host-Associated	2.26%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.74%
Plants	Host-Associated → Plants	2.26%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.26%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.96%
Loam	Environmental → Terrestrial → Soil → Loam	12.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.26%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.11%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	39.10%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.02%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.26%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	41.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.32%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	11.28%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.01%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.50%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001167	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027047	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF042 (SPAdes)	Environmental	Open in IMG/M
3300027069	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF002 (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12673J13574_10115652	3300001167	Forest Soil	MKHNVSWILLSYAVLGLTVIPVRAQERSEGKILVIEPGNDFRAALEKGVRLKKIGQPVTAKLLEPVYAGENLAIPAGSTIKGH
JGI12630J15595_101171361	3300001545	Forest Soil	MKRSVXWILLSYAVLGLTVIPVRAQESSEGKTLVIEPGNDFRAALEKGVRLKKIGQPVTAKLLEPVYAGENLAVPAGSTIK
Ga0066680_107612182	3300005174	Soil	MKRSVLLLLLSYSVLGLTAISVRAQETTPERKSLVIEPGDDFRAALEKGVRLKAAGQPITAKLLEPVYAGEDLAIPAGSTIKGHVSSISK
Ga0070709_115445952	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSMKNRDVSNVKRRLVWILLFHSVLGLTGIPLRAQDTRSEEKALVVEPGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEDLALP
Ga0070730_101482131	3300005537	Surface Soil	MNDRDVCNIKRKLVWILFFYSILGLTGIPVHAQDTRSDEKALIVGSGNDLRAALEKGVRLKTVGQPIIAKLIEPVYAGEVLAIPAGSM
Ga0070704_1008675632	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MKNRDVSNMKRRLVWILLFHSVLGLTGIPVRAQDTRSEEKALVVEPGNDFRAALEKGVRLRAVGQPITAKLLEPVYAGEDLALPAGSTIKGHVSSITTAPMRRRAGRL
Ga0070766_103222751	3300005921	Soil	MKRSIVWILLSYSVLGLTGIPARAQEAEPEKEALVVEPGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEVLAIPAG
Ga0070717_109748382	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MKRSVVWIFLSYSVLGLTGIPACAQETSSEKQTLVVDAGNDFRAVLQKGVRLKAVGQPITAKLLEPVY
Ga0070715_103985862	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MKHRVEWVLLSYSVLGLVAIPVHAQETRPERKSLVVEPGNDLRTALEKGVRLKAVGQPITAKLLEPVYAGEDLAIPAGSTIKGHVSAISTVPMRKRA
Ga0070716_1004727832	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSMKNRDVSNMKRRLVWILLFHSVLGLTGIPVRAQDTRSEEKALVVEPGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEDLALPAG
Ga0070765_1004661422	3300006176	Soil	MKRSVVWMLLSYSILGVTATPVSAQEIVPELQTLVVQPGNEFRAVLEKGVRLKSVGQPITATLLEPVYAGEALAVPA
Ga0099793_100456133	3300007258	Vadose Zone Soil	MSMKNRDVSNMKRRLVWILLSHSVLGLTGIPVCAQDTGSEEKALVIESGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEELAIPAGSTIKGHVSSITTAPMRKRAGRLLAGDFTP
Ga0099793_102576912	3300007258	Vadose Zone Soil	MKRNVVLVLLSYSVLGLTAIPVRAQETRSEGQTLIVEPGNDFRAALEKGVRLKAPGQPITARLLEPVYAGEV
Ga0099793_104855592	3300007258	Vadose Zone Soil	MKRNVVWIVLSYSLLSLTSIPARAQETKPETKTLVVQPGNDFRAALEKGVRLKAPGQLITAKLLEPVYAGEDLAIPAGSTIKGHVSAIS
Ga0099793_106980571	3300007258	Vadose Zone Soil	MKRNVVLVLLSYSVLGLTAIPVRAQETRSEGKTLIVEPGNDFRAALEKGVRLKAPGQPITARLLEPVYAGEV
Ga0099795_102881041	3300007788	Vadose Zone Soil	MKRSVVLLLLSYSVLGLTAISVRAQETPPETKSLVIERGNDFRAALEKGVRLKAAGQPITAKLLEPVYAGEDLAIPAGSTIKGHVSSISKAPM
Ga0099795_103061431	3300007788	Vadose Zone Soil	MKRSVVLLLLSYSVLGFTAISMRAQETTPERKSLVIEPGNDFRAALEKGVRLKAAGQPITAKLLEPVYAGEDLAIPAGSTIKGHVSSISKAPMRKRAGRLL
Ga0105245_117937892	3300009098	Miscanthus Rhizosphere	MKRSVVWILISYSAFGLAGVPVRAQETESEMQTVVVEPGNDLRAALEKGVRLKAVGQPITAKLIEPVYTGELLAIPAGST
Ga0099792_105798051	3300009143	Vadose Zone Soil	MKRSVMLLLLSYSVLGFTAISMRAQETTPERKSLVIEPGNDFRAALEKGVRLKAAGQPITAKLLEPVYAGEDLAIPAGSTIKGHVSSISKAPMRKRAGRL
Ga0099792_108774511	3300009143	Vadose Zone Soil	MKRSVVWILYSYSVLGLTAISVPAQETKPERETLVVATGNDFRAALEKGVRLKAVGQPITAKLLGPVYAGEDVAIPAGSTLKGHVSAISTAPVRKRARRLL
Ga0137392_101325283	3300011269	Vadose Zone Soil	MSMKNRDASNMKRRLVWILLFHSVLGLTGIPARAQDTRSEEKVLVVEPGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEDLAIPAGSTIKG
Ga0137392_102128212	3300011269	Vadose Zone Soil	LGLTANPLPAQETRSERETLVVESGNDFRAALEKGIRLKAIGQPITAKLLEPVYAGEVLAIPAGSTIKGHVSAIS
Ga0137391_102497572	3300011270	Vadose Zone Soil	MKRSVVLLLLSYSVLGPTAIPVRAQETTPERKSLVIEPGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEVLAIPAGSTIKGHVSSI
Ga0137393_103775412	3300011271	Vadose Zone Soil	MKRSVVWILLSYSVLGVAAVPARAQETKPEKETLVVEPGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEMLAIPAGSTIKGHVSAIS
Ga0137363_102715783	3300012202	Vadose Zone Soil	MKRSVVLILISYSVLGLAGIPVRAQETDSEKETVVVEPGNNLRAALEKGVRLKAVGQPITAKLIEPVYAGEALAIPAG
Ga0137399_101784232	3300012203	Vadose Zone Soil	MKRSVVWILLSYSVLGLTGIPVRAQETRSERETLVVEPGNDFRAALEKGVRLKAVGQPITAKLLEPVYSGEVLAIPAGSTIKGHVSAISTAPMRKR
Ga0137399_102202131	3300012203	Vadose Zone Soil	MKRSVVLVLLSYSVLGLTAVPVRAQETGPERKSLVVEPGNDFRAALEKGVRLKSAGQPLTARLLEPVYAGEDLAIPAGSAIKGHVSSISTAPMRKRAGRL
Ga0137362_101553472	3300012205	Vadose Zone Soil	MKRNVVWIVLSYSLLSLTSIPARAKETKPETKTLVVQPGNDFRAALEKGVRLKAPGQLITAKLLEPVYAGEDLAIPAGSTIKGHVSAISTAPMRKRARR
Ga0137362_105453542	3300012205	Vadose Zone Soil	MKRSIVLVLLSYSVFGQTAVPVWAQEMALEKKTVVLVPGNDFRAALDKGVRLKSVGQPITAKLLEPVYAGEDLALPAGSIINGHVSSITTAPMRKRAGRLLAGDFTPPKTAHV
Ga0137362_111326481	3300012205	Vadose Zone Soil	MKRSVVLLLLSHSVLGLTAISVRAQETTPERKSLVIESGNDFRAALEKGVRLKAAGQPITAKLLEPVYAGED
Ga0137361_110140362	3300012362	Vadose Zone Soil	VRAQETRPERKSLVVAPGNDFRAALEKGVRLKVVGQPITAKLLEPFYGGEDVAIPAGATRKGHVSAISTAPMRKRA
Ga0137361_115035061	3300012362	Vadose Zone Soil	MKRSVVLLLLSYSVLGLTAISVRAQETTPERKSLVIEPGNDFRAALEKGVRLKAAGQPITAKLLEPVYAGEDLAIPAGSTIKGHVSSISKAAMRKRAGRLLAGDFTPPKTAN
Ga0137390_107449962	3300012363	Vadose Zone Soil	MKRSVVLVLLSYSVFGQMAMPVWAQETALEKKTVALVPGNDFRAALDKGVRLKAVGQPVTAKLLEPVYAGEDLALPAGATIKGHVSSIGTAPMRKRAGRLLAGDFTPP
Ga0137390_115866181	3300012363	Vadose Zone Soil	MSTKNGDVSNMKRRLVWVLLSHSVLGLTANPLPAQETRSERETLVVESGNDFRAALEKGVRLKAPGQPITARLLEPVYAGEVLAIPAGSTIKGHVSAISTA
Ga0137390_119512511	3300012363	Vadose Zone Soil	MKRSVVLLLLSYSVLGPTAIPVHAQETTPERKSSVIEPGNDFRAALEKGVRLKSAGQPITAKLLEPVYAGEDLAIPAGSTI
Ga0137358_110884711	3300012582	Vadose Zone Soil	MKASVVWILFSCSVLCFAANRVRAQETRPERKSLVVAPGNDFRAALEKGVRLKVVGQPITAKLLE
Ga0137398_102559921	3300012683	Vadose Zone Soil	MKRSVVLVLLSYSVLGLTAVPVRAQETGPERKSLVVEPGNDFRAALEKGVRLKSAGQPITARLLEPVYAGEDLAIPAGSTIKGHVSSISTAPMRKRAGRLLSGDFTPPKTAHVT
Ga0137398_105831082	3300012683	Vadose Zone Soil	MKRSVVLVLLSYSVLTAVPVRAQETGPERKSLVVQPGNDFRAALEKGVRLKSAGQPITARLLEPVYAGEDLAIPAGSTIKGHVSSISTAPMRKRAGRLLSG
Ga0137395_1000087513	3300012917	Vadose Zone Soil	MSMKNRDVSNMKRRLVWILLSHSVLGFTGIPVRAQDTGSEEKPLVIESGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEDLAIPAGSTIKGHVSGI
Ga0137396_112424992	3300012918	Vadose Zone Soil	MKNRDVSGMKRRFVWILLSYSVLGLTAVPVRAQETTPERKSLVIESGNDFRAALEKGVRLKAAGQPITAKLLEPVYAGE
Ga0137394_105275832	3300012922	Vadose Zone Soil	MKRSVVLLLLSYSVLGFTAISMRAQETTPERKSLVIEPGNDFRAALEKGVRLRAAGQPITAKLLEPVYAGE
Ga0137359_113178561	3300012923	Vadose Zone Soil	MRNTMKRSVVWILLSCLVLGLAAIPVPAQETKAERETLVVAPGNDFRAALEKGVRLKAPGQPITARLLEPVYAGEVL
Ga0137419_100871721	3300012925	Vadose Zone Soil	MKRSVLLLLLSCSTLGLTAIAVRAQETTPERKSLVIEPGNDFRAALERGVRLKSAGQPITARLLEPVYAGEDLAIPAGSTIKGHVS
Ga0137419_102556772	3300012925	Vadose Zone Soil	MSTKNGDVPNMKRRLVWVLLSHSVLGLTANPLPAQETRSERETLVVASGNNFRATLEKGVRLKAVGQPITAKMLEPVYAGEVLAIPAGSTI
Ga0137419_103477531	3300012925	Vadose Zone Soil	MKRNVVLVLLSYSVLGLTGIPVRAQETRSEGKTLIVEPGNDFRAALEKGVRLKAPGQPITARLLEPVYAGEVLAIP
Ga0137416_104224721	3300012927	Vadose Zone Soil	MKRSVVLLLLSYSVLGLTAISVRAQETTPERKSLVIEPGNDFRAALEKGVRLKAAGQPITAKLLEPVYAGEDLAIPAGSTIKGHVSS
Ga0137416_114609531	3300012927	Vadose Zone Soil	MKRNGAWILLSFSVFGLTGISVPAQETKPEKENLVVEPGNDFRAALQKGVRLKKVGQPITAKLLEPVYAGETLAIPAGST
Ga0137410_104874392	3300012944	Vadose Zone Soil	MKRSVVWILLSCSVLCFATNPVRAQDTKPERETLVVAPGNDFRAALEKGVRLKAIGQPITARLLEPVYAGEVLAIPAGSTIKGHVSAMSAA
Ga0157374_126357071	3300013296	Miscanthus Rhizosphere	MSMKNRDVSNMKRRLVWILLFHSVLGLTGIPVRAQDTRSEEKALVVEPGNDFRAALEKGVRLKAVGQPITAKFLKPVYAGEDLALPAGSTIK
Ga0137405_11527811	3300015053	Vadose Zone Soil	MSMKNRDVSNTKGRLVWILLFHSALGLTGIPVHAQDTRSEEKALVVEPGNDFRAALDKGVRLKAVGQPISAKLLEPVYAGEDLALPAGSTIKGHVSAITTAPMRKRAGRLLAG
Ga0137420_11746481	3300015054	Vadose Zone Soil	MKRSVVLLLLSYSVLGFTAISMRAQETTPERKSLVIEPGNDFRAALEKGVRLKAAGQPITAKLLEPVYAGEDLARSLQAPRSRD
Ga0137403_116168632	3300015264	Vadose Zone Soil	MKRSVVWILISYSVFGFTSIPVRAQETGSEKETLVVERGNDLRAALEKGVRLKAVGQPITAKLIEPIYAGDVLAIPAGST
Ga0066662_121455811	3300018468	Grasslands Soil	MKRSVVWILRSCLVLGLAAIPVPAQETNPERETLVVAPGNDFRAALEKGVRLKAPGQPITARLLEPVYAGEVLAIPAGATLKGHVSAISAAPKRKRARRLLDGDCTAPK
Ga0179592_101490992	3300020199	Vadose Zone Soil	MSTKNRDGSNMKRRLVWILLFHSVLGPMGIPARAQETGSEKETLVVERGNDLRAVLDKGVRLKSVGQPVTAKLLEPVYAGEDLALPAGST
Ga0210407_100474051	3300020579	Soil	MSMKNRDVSKIKRRLVGILLFHSVFGQMAMPVSAQETALEKETLVLVPGNDFRAALDKGVRLKAVGQPVTAKLLEPVYAGEDLALPAGSTIKGHVSSITTAPMRKRAG
Ga0210407_100645351	3300020579	Soil	MKRSVVWVLLSYSVLGLTAIPVRAQETSPERKSLVVEPGNDFRAALEKGVRLKAVGQPITARLLEPIYAGEDLAIPAGSTIKGHVSSITVAPVRKRAG
Ga0210407_104568452	3300020579	Soil	MKRSVVWILLSYSLLGLTGIPVLAQETGAEKETLVVEPGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEALAIPAGSTIKGHVSAISTAPHK
Ga0210407_107167022	3300020579	Soil	MKRSVVLVLLSYSVLGLTGIPVRAQETGPERKSLVVQPGNDFRAALERGVRLKTVGQAISAKLLEPVYAGEDLAIPA
Ga0210399_100753151	3300020581	Soil	MSMKNRDVSNMKRRLVWILLSHSVLGLTGIPVCAQDSRSEEKALVIESGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEDL
Ga0210399_106168822	3300020581	Soil	MKRNVVLILLSYSVLGLTGIPVRAQETKPERETLVVEPGNDFRAALEKGVRLKAVGQPITAKLIEPVYAGEVLAIPAGSTIKGHV
Ga0210401_103511441	3300020583	Soil	MKRSVKWIFLSYSILGLTSIPVRAQEIKPETETLVVEPGNDFRAALQKGVRLKAVGQPITAKLLEPVYAGEALAIPAGSTVKGHVSSISKVP
Ga0210401_103863503	3300020583	Soil	MKRSFMWILISYSAFGLAGFPVRANETKSEKETVVVEPGSDFRAAIEKGVRLKAVGQPIAAKLLEPVYAGDVL
Ga0210401_104785912	3300020583	Soil	MKRNFTWILLSYSVLGLTSIPVHAQETKPEKENLVVEPGNDFRAALQKGVRLKAVGQPITAKLLEPVYSGEVLAIPAGATVK
Ga0210401_105457943	3300020583	Soil	MKRSVVWVLISYSVLGLAGITVRAQETKSEKETLVVEPGNDLRAALEKGVRLKAVGQPITAKLIEPVYAGEALAIPAGS
Ga0210404_100358373	3300021088	Soil	MKRSVVLVLLSCSVFGQMTMPVWAQETALEKKTVVLVPGNDFRAALDKGVRLKAVGQPVTAKLLEPVYAGEALALPAGSTIKGHVS
Ga0210404_102874241	3300021088	Soil	MKRNGAWILLSFSVFGLTGISAHAQETKPEKENLVVEPGKDFRAALQKGVRLKKVGQPITAKLLEPVYAGETLAIPAGSTVK
Ga0210400_106664681	3300021170	Soil	MKRSVVWILLSYSVLGLTGIPVRAQETGSEKETLVVEPGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEA
Ga0210400_111891401	3300021170	Soil	MKRSVVLVLLSYSVLGLTGIPVRAQETGPERKSLVVQPGNDFRAALERGVRLKTVGQAISAKLLEPVYAGEDLAIPAGSTIKGHVSAISTAPMRKRAGRLLSGDFTP
Ga0210408_110658201	3300021178	Soil	MPEKNCNVSSMKRRFVWILLSYSVLGLASIPVRAQETESEGKTLVVEPGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEVLAIPAGSTIKGHVSAISTAPM
Ga0210408_111511951	3300021178	Soil	MKRSVVCMLLSYSILGLTGSPVRAQETRSEKETLVVEPGNDFRAALEKGVRLKTVGQPITAKLLEPVYA
Ga0210383_102152691	3300021407	Soil	MKRNGAWILLSFSVFGLKGISVHAQETKPEKESLVVEPGNDFRAALQKGVRLKKVGQPITAKLLEPVYA
Ga0210394_104734411	3300021420	Soil	MKRSVVWILISYSVFGLTSIPVRAQETGSEKETLVVEPGNDLRAALEKGVRLKAVGQPITAKLIEPVYAGEALAIP
Ga0210384_100206591	3300021432	Soil	MKRSVVWILLSYSVLGLTGIPVGAQGTRTEKEALVVEPGSDFRAALEKGVRLKTVGQPITAKLLEPVYAGEVLAVP
Ga0210392_114289521	3300021475	Soil	MNDRDVCNMKRKLVWILFFYSILGLTGIPVHAQDTRSDEKALIVGSGNDLRAALEKGVRLKTVGQPIIAKLIEPVYAGEVLAIPA
Ga0210402_109534671	3300021478	Soil	MKRSAVLVLLSYSVFGQMARPVCAQEMALEKKTVVLVPGNDFRAALDKGVRLKAVGQPVTAKLLEPVYAGEALALPAGSMIKGHVSSISTAPMRERAGRLLAGDFTPPKTAHVT
Ga0210410_103564512	3300021479	Soil	MSTKNGDVSNMKRRFGWVLLSYSVLGLTGIPVRAQETRSEGKTLVIEPGNDFRAALEKGVRLKAVGQPITAKMLEPVYTGEVLAIPAG
Ga0210410_110096401	3300021479	Soil	MKRSVVGILLSYSLLGLTGIPVRAQETGAEKETLVVEPGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEALAIPAGSTIKGHVSAISTAPHKRA
Ga0210410_110323552	3300021479	Soil	MSMKNRDVSNMKRRLVWILLSHSVLGFTGIPLRAQDTRSEEKALVIESGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEDLAIPAGSTIKGHVSAISTAPMRKRAGR
Ga0210409_103150811	3300021559	Soil	MKRSVVLVLLSYSVFGQMAMPVCAQETALENKTVVLVPGNDFRAALDKGVRLKAVGQPVTAKLLEPVYAGEALALPA
Ga0137417_12624471	3300024330	Vadose Zone Soil	MKRNVVLVLLSYSVLGLTAIPVRAQETRSEGKTLIVEPGNDFRAALEKGVRLKAPGQPITARLLEPVYAGEVLAIPAGSTIKRRS
Ga0207671_114269522	3300025914	Corn Rhizosphere	MKRSVVWILISYSAFGLAGVPVRAQKTESEMQTVVVEPGNDLRAALEKGVRLKAVGQPITAKLIEPVYAGELLAI
Ga0209240_10648811	3300026304	Grasslands Soil	MYMKNRDGSNMKRRLVWILLFHSVLGLTGIPVRAQDTRSEEKVLVVEPGNNFRAALEKGVRLKAVGQPMTAKLLEPVYAGEDLAIPAGSTIKGHVSAIS
Ga0209240_12101291	3300026304	Grasslands Soil	MKRSVLWVLLSYSVLGLTGIPVRAQEKRSERETLVVEPGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEVLAIP
Ga0257172_10129091	3300026482	Soil	MKRNVVLVLLSYSVLGLTAIPVRAQETRSEGKTLIVEPGNDFRAALEKGVRLKAPGQPITARLLEPVYAGEVLAIPAGSTIKGHVSAIS
Ga0257153_10675782	3300026490	Soil	MKRSVVWILISYSAFGLAGVPVRAQETESEKETVVVEPGNDLRAALEKGVRLKAVGQPITAKLIEPVYAGEALAIPAGSTVKG
Ga0257159_10841381	3300026494	Soil	MKRSIVWILLSCSALGLTGIPVRAQETGSEKETLVVQPGNDFRAALEKGARLKAVGQPITAKLLEPVYAGEVLAV
Ga0257157_10714081	3300026496	Soil	MKRSVFWILLSYAVLGLTVIPVRAQESPGGKTLVIEPGNDFRAALEKGVRLKKIGQPVTAKLLEPVYAGESLAVPAGATIKGHVSA
Ga0257165_11155021	3300026507	Soil	MKRNGAWILLSYSVLGLSSIPVLAQETKPEKENLVVEPGNDFRAALQKGVRLKKVGQPITAKLLEPVYAGETLAIPAGSTVKG
Ga0257168_11203071	3300026514	Soil	MKRNVVWIVLSYSLLSLTSIPARAQETKPETKTLVVQPGNDFRAALEKGVRLKGPGQPITARLLEPVYAGEDLAIPAGST
Ga0209648_101751593	3300026551	Grasslands Soil	MKRSVVLILISYSVLGLAGIPVRAQETDSEKETVVVEPGNNLRAALEKGVRLKAVGQPITAKLIEPVYAGEALAIPAGSTIKGH
Ga0179593_10954732	3300026555	Vadose Zone Soil	MKRSVKWIFLSYSILGLTSISVRAQEVKPETETLVVEPGNDFRAALQKGVRLKAVGQPITATLLEPVYAGEALAIPAGSTVKGHVSSISKVPMHKRGEDSWMATLLRRGSRT
Ga0179587_109784912	3300026557	Vadose Zone Soil	MPVKNRDVSNRKRRFVWILLSYSALGLAANPLPAQETKPERETLVVEPGNDFRAALEKGMRLRAPGQPITARLLEPIYAGEVLAIPAGSMIKGHVSAISTAPMRKRA
Ga0179587_110261201	3300026557	Vadose Zone Soil	MKRSVVWILFSYSVLGLTAISVPAQETKPERETLVVATGNDFRAALEKGVRLKAVGQPITAKLLGPVYAGEDVAIPAGSTLKGH
Ga0179587_110660231	3300026557	Vadose Zone Soil	MKRSVVWILISYSVLGLAGIPVRAQETESEKETVVVEPGSDFRAAIEKGVRLKAVGQPITAKLLEPVYAGEVLAVPAGATIKGHVSAISKAPMRKRTRR
Ga0208730_10165431	3300027047	Forest Soil	MKRSVVWMLLSYSILGLTGIPVRAQETVPEWQTLVVQPGNDFRAALEKGVRLKSVGQPITAKLLEPVYAGEALAVPAGSTIKGHVSAISTAPHKRVGRLLSGDF
Ga0208859_10055031	3300027069	Forest Soil	MSMKNRDVSSMKRRLVLILLFHSVFGQMAMPVWAQETAFENETLVLVRGNDFRAALDKGVRLKGVGQPVAAKLLEPVYAG
Ga0208365_10152161	3300027070	Forest Soil	MSMKNRDVSSMKRRLVLILLFHSVFGQMAMPVWAQETAFEKETLVLVRGNDFRAALDKGVRLKGVGQPVTAKLLEPVYAGEDLALPAGSTIKGHVSSIATTPMRKRAGRLLAGDFTPPKT
Ga0209179_11317721	3300027512	Vadose Zone Soil	MKRSVVLLLLSYSVLGLTAISVRAQETTPERKSLVIEPGNDFRAALEKGVRLKAAGQPITAKLLEPVYAGEDLAIPAGSTIKGHVSSISKAPMRKRAGRLLAGDFTPPKTANVTF
Ga0209219_11019822	3300027565	Forest Soil	MKRSVSWILLSYAVLGLTVIPVRAQESSEGKTLVIEPGNDFRAALEKGVRLKKIGQPVTAKLLEPVYAGENLAIP
Ga0209220_11533621	3300027587	Forest Soil	MKRSVVWVLLSYSVLGLTGIPVRAQETRPESKPLVVEPGNDFRAALEKGVRLKAPGQPITARLLEPVYAGEVLAIPAGSTSF
Ga0209076_10869861	3300027643	Vadose Zone Soil	MSMKNRDVSNMKRRLVWILLSHSVLGLTGIPVCAQDTGSEEKALVIESGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEDLAI
Ga0208991_12072171	3300027681	Forest Soil	MKRSVVLFLLSYSVLVLTAISVRAQETTPERKSLVIESGNDFRAALEKGVRLKAAGQPITAKLLAPVYAGEDLAIPAGSTIKGHVSSISKAPMRKRAGRLLAGDFTPPKTANVTFDQIVL
Ga0209180_101434413	3300027846	Vadose Zone Soil	MKRSVVWILLSYPVWGLTGIPVGAQEARSERETLVVQPGNDFRAALEKGVRLKTVGQPITARLLEPVYAGEVLAIPAGSTIKGHVSAISTAPMRKRARRLLDGDFTP
Ga0209701_100312571	3300027862	Vadose Zone Soil	MSTKNGDVSNMKRRLVWVLLSHSVLGLTANPLPAQETRSERETLVVESGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEVLAIPAGSTIK
Ga0209701_100629773	3300027862	Vadose Zone Soil	MKRTVVWILLSYPVWGLTGIPVGAQEARSERETLVVEPGNDFRAALEKGVRLKTVGQPITAKLLEPVYAGEVLAIPAGSTIK
Ga0209701_100660883	3300027862	Vadose Zone Soil	MKRSVVWILLSYSVLGVAAVPARAQETKPEKETLVVEPGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEMLAIPAGSTIKGHVSAISTAP
Ga0209701_101882311	3300027862	Vadose Zone Soil	MSTKNRDVSNMKRRLVWILLSHSVLGLTANPLPAQETRSERETLVVESGNDFRAALEKGIRLKAVGQPITAKLLEPVYAGEVLAIPAGSTIK
Ga0209283_103552362	3300027875	Vadose Zone Soil	MKRSVVWVLLSYSVLGLTGIPVRAQETGSEEKTLVLEPGNDFRAALEKGVRLKTVGQPITAKLLEPVYAGEVLAIPA
Ga0209488_102059482	3300027903	Vadose Zone Soil	MKRSVVLLLLSYSVLGLTAISVRAQETTPERKSLVIEPGNDFRAALEKGVRLKAAGQPITAKLLEPVYAGEDLAIPAGSTIKGHVSSISKAPMRKRAGR
Ga0209526_105311451	3300028047	Forest Soil	MSMKNRDVSNMKRRLVWILLSHSVLGLTGIPVRAQDTRSEEKALVIESGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEDLAIPAGSTIKGHVSAISTAPMRKRAGRLLD
Ga0137415_113731861	3300028536	Vadose Zone Soil	MKHRVEWVLLSYSVLGLVAIPVHAQETRPERKSLVVEPGNDLRTALEKGVRLKAVGQPITAKLLEPVYAGEDLAIPAGSTIKG
Ga0308309_103259302	3300028906	Soil	MKRSVVWMLLSYSILGVTATPVSAQEIVPELQTLVVQPGNEFRAVLEKGVRLKSVGQPITATLLEPVYAGEALAVPAGST
Ga0222749_100744582	3300029636	Soil	MKRSVVLVLLSCSVFGQMTMPVWAQETALEKGVRLKAAGQPITARLLEPVYAGEDLVVPAGSTIKGHVSAISTAPM
Ga0222749_102896011	3300029636	Soil	MKRSIVWILLSYSVLGLTGIPARAQEAEPEKEALVVEPGNDFRAALEKGVRLKAVGQPITAKLLEPVYAGEVLAIPAGSTIKGHVSAISTAPHKRA
Ga0222749_105134451	3300029636	Soil	MKRSFVWVLLSYSVLVLAAVPMHAQEAKPERKTLVLEPGNDFRATLEKGVRIKAPGQPITARLLEPVYAGETLAIPAGTTVKGHVS
Ga0222749_105640172	3300029636	Soil	MKRSVVWILLSYSVLGLTGIPVGAQGTRTEKEALIVEPGSDFRAALEKGVRLKTVGQPITAKLLEPVYAGEVLAVPAGSTIQGHVSAISTAPMRQR
Ga0170834_1129327901	3300031057	Forest Soil	MCMKNRDVSSVKCRLVWILLLHSVFGQMAMPVWAQETALEKETLFLVRGNDFRAALDKGVRLKAVGQPVTAKLLEPVYAGEDLA
Ga0170823_164454282	3300031128	Forest Soil	MCMKNRDVSSVKCRLVWILLLHSVFGQMAMPVWAQETALEKETLVLLRGNDFRAALDKGVRLKAVGQPVTAKLLEPVYAGEDLALPSGSTIKGHVSSIT
Ga0307474_105963992	3300031718	Hardwood Forest Soil	MSMKNRDVSSMKRRLVLILLFHSVFGQMAMPVWAQETAFEKETLVLVRGNDFRAALDKGVRLKAVGQPVTAKLLEPVYAGEDLAL
Ga0307469_112337281	3300031720	Hardwood Forest Soil	VPMKNRDVSGMKRRFVWILLSYSVLGLTAVPVRAQETTPERKSLVIESGNDFRAALEKRVRLKAAGQPITAKLLEPVYAGEELAIPAGSTIKGHVSSITTAPMRKRVGRLLAGDFTPPKT
Ga0307469_118218521	3300031720	Hardwood Forest Soil	MKRSVVWILISYSAFGLAGVPVRAQETESEKETVVVEPGNDLRAALEKGVRLKAVGQPITAKLIEPVYV
Ga0307477_107046192	3300031753	Hardwood Forest Soil	MKRSVVWMLLSYSILDLTGIPVRAQETIPERQTLVVQPGNDFRAALEKGVRLKSVGQPISAKLLEPVYAGEALAVPAG
Ga0307475_113326812	3300031754	Hardwood Forest Soil	MKNREMSSIKRRFAWILLSYSVLGLTANPLPAQETKPERTTLVLEPGNDFRAALEKGVRLKAPGQPIAAKLLEPVYAGDVLAIPAGSTIKGHV
Ga0307478_117957701	3300031823	Hardwood Forest Soil	MKRNLFWILLCYAVLCLTGIPVRAQEQPEGGTLVIKPGNDFRAALEKGVRLKKIGQPVTAKLLEPVYAGENLAIPAGSTIKGHVS
Ga0307479_118603701	3300031962	Hardwood Forest Soil	MKRSVVWVLLSCSALGLTSIPVRAQETGPERKSLVVEPGNDFRAALEKGVRLKAEGQPITARLLEPVYAGEDLAIPAGSTIKGHVS
Ga0307479_119762401	3300031962	Hardwood Forest Soil	MKRSVVWMLLSYSVLGLTGIPVRAQETRPERKTLVVEPGNDFRAALEKGVRLKAPGQPITAKLLEPVYAGEVLAIPAGSTIKGHVSAISTAPMR
Ga0307470_101131781	3300032174	Hardwood Forest Soil	MKRSAVWILISYSVWGLAGIPVRAQETESEKETVVVEPGNDLRAALEKGVRLKAVGQPITAKLIEPVYAGEALAIPA
Ga0307471_1003538152	3300032180	Hardwood Forest Soil	MKRSVVLVLLSYAVLGFTAVSVRAQETAPEKKTLVLEPGNDFRATLEKGVRLKAAGQPITARLLEPVYAREDLAIPAGSTIKGHVSAISTAPMRK
Ga0307471_1003761211	3300032180	Hardwood Forest Soil	MKRSVVWILISYSAFGLAGVPVRAQESQSEKETVVVEPGNDLRAALEKGVRLKAVGQPITAKLIEPVYAGEVLAI
Ga0307471_1004671972	3300032180	Hardwood Forest Soil	MKRCVVLVLLSYSVLGLTAVPVRAQETTPERKSLVIEPGNDFRAALEKGVRLKAAGQPITARLLEPVYAGEDLAIPAGSTIEGHVS
Ga0307471_1013006251	3300032180	Hardwood Forest Soil	MKRSAVWILISYSVWGLAGIPVRAQETESEKETVVVEPGNDLRAALEKGVRLKAVGQPITAKLIEPVYAGEALAIPAGSTVK
Ga0307471_1038083361	3300032180	Hardwood Forest Soil	MKRSVVWILISYSAFGLAGVPVRAQETESEMQTVVVEPGNDLRAALEKGVRLKAVGQPITAKLIEPVYAGALL
Ga0307472_1022827722	3300032205	Hardwood Forest Soil	MSMKNRNAPNMKHGLVWILLLHSVLGLSGIPVRAQDTRSEEKALVVVPGNDFRAALDKGVRLKAVGQPITAKLLEPVYAGEDLALPAGSTIKGHVSSITT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060382

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences