Metagenome / Metatranscriptome Family F060397

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060397
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	45 residues
Representative Sequence	MRLRLGAAAGAAIVLVGVVGAPTLPVMIGATLAYAWLLWRAVGAR
Number of Associated Samples	94
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	66.15 %
% of genes near scaffold ends (potentially truncated)	33.08 %
% of genes from short scaffolds (< 2000 bps)	86.47 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.466 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (27.820 % of family members)
Environment Ontology (ENVO)	Unclassified (45.113 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.135 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.42% β-sheet: 0.00% Coil/Unstructured: 46.58%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF00543	P-II	14.29
PF13414	TPR_11	13.53
PF14559	TPR_19	8.27
PF02705	K_trans	6.77
PF00909	Ammonium_transp	6.77
PF13432	TPR_16	5.26
PF13176	TPR_7	2.26
PF07719	TPR_2	2.26
PF00324	AA_permease	1.50
PF00589	Phage_integrase	0.75
PF00196	GerE	0.75
PF13520	AA_permease_2	0.75
PF03951	Gln-synt_N	0.75
PF13371	TPR_9	0.75
PF14514	TetR_C_9	0.75
PF00903	Glyoxalase	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG0347	Nitrogen regulatory protein PII	Signal transduction mechanisms [T]	14.29
COG0004	Ammonia channel protein AmtB	Inorganic ion transport and metabolism [P]	6.77
COG3158	K+ uptake protein Kup	Inorganic ion transport and metabolism [P]	6.77
COG0531	Serine transporter YbeC, amino acid:H+ symporter family	Amino acid transport and metabolism [E]	1.50
COG0833	Amino acid permease	Amino acid transport and metabolism [E]	1.50
COG1113	L-asparagine transporter or related permease	Amino acid transport and metabolism [E]	1.50
COG1115	Na+/alanine symporter	Amino acid transport and metabolism [E]	1.50
COG0174	Glutamine synthetase	Amino acid transport and metabolism [E]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.47 %
Unclassified	root	N/A	13.53 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.47 %
Unclassified	root	N/A	13.53 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.47 %
Unclassified	root	N/A	13.53 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	69.17 %
Unclassified	root	N/A	13.53 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.75 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.75 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	63.91 %
Unclassified	root	N/A	13.53 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.75 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.75 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	63.91 %
Unclassified	root	N/A	13.53 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.75 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	63.91 %
Unclassified	root	N/A	13.53 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	63.91 %
Unclassified	root	N/A	13.53 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	63.91 %
Unclassified	root	N/A	13.53 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples	0.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	63.91 %
Unclassified	root	N/A	13.53 %
uncultured Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples → uncultured Gemmatimonadaceae bacterium	0.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002908\|JGI25382J43887_10067986	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1926	Open in IMG/M
3300005166\|Ga0066674_10070470	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1600	Open in IMG/M
3300005166\|Ga0066674_10235330	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	870	Open in IMG/M
3300005167\|Ga0066672_11034591	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	500	Open in IMG/M
3300005171\|Ga0066677_10606687	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	621	Open in IMG/M
3300005172\|Ga0066683_10007608	All Organisms → cellular organisms → Bacteria → Proteobacteria	5472	Open in IMG/M
3300005172\|Ga0066683_10406672	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300005174\|Ga0066680_10379063	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	900	Open in IMG/M
3300005174\|Ga0066680_10965445	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	501	Open in IMG/M
3300005178\|Ga0066688_10953470	All Organisms → cellular organisms → Bacteria → Proteobacteria	526	Open in IMG/M
3300005180\|Ga0066685_10126977	All Organisms → cellular organisms → Bacteria	1722	Open in IMG/M
3300005180\|Ga0066685_10294106	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1123	Open in IMG/M
3300005186\|Ga0066676_10340875	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1000	Open in IMG/M
3300005332\|Ga0066388_100305239	All Organisms → cellular organisms → Bacteria	2237	Open in IMG/M
3300005332\|Ga0066388_101799826	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1089	Open in IMG/M
3300005332\|Ga0066388_102946358	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300005332\|Ga0066388_103499332	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	802	Open in IMG/M
3300005332\|Ga0066388_108055792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	527	Open in IMG/M
3300005332\|Ga0066388_108337536	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	517	Open in IMG/M
3300005336\|Ga0070680_101721198	Not Available	543	Open in IMG/M
3300005445\|Ga0070708_100718465	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300005445\|Ga0070708_100718967	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300005446\|Ga0066686_10198496	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300005446\|Ga0066686_10992306	Not Available	546	Open in IMG/M
3300005447\|Ga0066689_10333439	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	944	Open in IMG/M
3300005467\|Ga0070706_101448701	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	628	Open in IMG/M
3300005468\|Ga0070707_100284042	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1608	Open in IMG/M
3300005468\|Ga0070707_100873172	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	864	Open in IMG/M
3300005518\|Ga0070699_100649661	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	963	Open in IMG/M
3300005529\|Ga0070741_10008132	All Organisms → cellular organisms → Bacteria	21230	Open in IMG/M
3300005536\|Ga0070697_100146681	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1987	Open in IMG/M
3300005536\|Ga0070697_100236096	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1561	Open in IMG/M
3300005536\|Ga0070697_100481355	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1084	Open in IMG/M
3300005536\|Ga0070697_100893147	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300005555\|Ga0066692_10325222	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	975	Open in IMG/M
3300005555\|Ga0066692_10545931	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	733	Open in IMG/M
3300005555\|Ga0066692_10641932	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300005566\|Ga0066693_10221994	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	742	Open in IMG/M
3300005568\|Ga0066703_10702130	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	582	Open in IMG/M
3300005764\|Ga0066903_100299416	All Organisms → cellular organisms → Bacteria	2543	Open in IMG/M
3300006032\|Ga0066696_10615103	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	704	Open in IMG/M
3300006163\|Ga0070715_10185590	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300006797\|Ga0066659_11381720	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	588	Open in IMG/M
3300006852\|Ga0075433_11457271	Not Available	592	Open in IMG/M
3300006854\|Ga0075425_100133489	All Organisms → cellular organisms → Bacteria → Proteobacteria	2839	Open in IMG/M
3300006854\|Ga0075425_100746382	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1123	Open in IMG/M
3300006854\|Ga0075425_101057909	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300006871\|Ga0075434_100436170	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1331	Open in IMG/M
3300009012\|Ga0066710_100397090	All Organisms → cellular organisms → Bacteria	2054	Open in IMG/M
3300009012\|Ga0066710_101191458	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1180	Open in IMG/M
3300009012\|Ga0066710_103008763	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	656	Open in IMG/M
3300009012\|Ga0066710_104277010	Not Available	533	Open in IMG/M
3300009038\|Ga0099829_10221995	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1535	Open in IMG/M
3300009089\|Ga0099828_10034959	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4080	Open in IMG/M
3300009090\|Ga0099827_10730699	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	856	Open in IMG/M
3300009137\|Ga0066709_101314402	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1059	Open in IMG/M
3300009147\|Ga0114129_10827408	Not Available	1179	Open in IMG/M
3300010320\|Ga0134109_10132957	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	886	Open in IMG/M
3300010320\|Ga0134109_10225016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	700	Open in IMG/M
3300010333\|Ga0134080_10155359	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	972	Open in IMG/M
3300010358\|Ga0126370_12071832	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	558	Open in IMG/M
3300010391\|Ga0136847_11745158	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1266	Open in IMG/M
3300010398\|Ga0126383_11113321	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	879	Open in IMG/M
3300010398\|Ga0126383_12783142	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	571	Open in IMG/M
3300011269\|Ga0137392_11051343	Not Available	668	Open in IMG/M
3300011270\|Ga0137391_10229617	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1611	Open in IMG/M
3300011271\|Ga0137393_10983445	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	719	Open in IMG/M
3300012096\|Ga0137389_10753147	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	837	Open in IMG/M
3300012189\|Ga0137388_10042926	All Organisms → cellular organisms → Bacteria	3616	Open in IMG/M
3300012189\|Ga0137388_11369996	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	647	Open in IMG/M
3300012189\|Ga0137388_11701107	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	565	Open in IMG/M
3300012203\|Ga0137399_10892987	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	748	Open in IMG/M
3300012206\|Ga0137380_10947508	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	738	Open in IMG/M
3300012206\|Ga0137380_11128223	Not Available	667	Open in IMG/M
3300012209\|Ga0137379_10550040	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1062	Open in IMG/M
3300012210\|Ga0137378_11641075	Not Available	551	Open in IMG/M
3300012211\|Ga0137377_11028896	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	754	Open in IMG/M
3300012362\|Ga0137361_10256850	All Organisms → cellular organisms → Bacteria	1593	Open in IMG/M
3300012362\|Ga0137361_10739029	Not Available	898	Open in IMG/M
3300012362\|Ga0137361_11521014	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	591	Open in IMG/M
3300012363\|Ga0137390_11916065	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	521	Open in IMG/M
3300012923\|Ga0137359_10312621	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1398	Open in IMG/M
3300012929\|Ga0137404_10293630	All Organisms → cellular organisms → Bacteria → Proteobacteria	1408	Open in IMG/M
3300012976\|Ga0134076_10126736	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1031	Open in IMG/M
3300014166\|Ga0134079_10704648	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	515	Open in IMG/M
3300015356\|Ga0134073_10147948	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	740	Open in IMG/M
3300015358\|Ga0134089_10481935	Not Available	541	Open in IMG/M
3300015371\|Ga0132258_10259276	All Organisms → cellular organisms → Bacteria → Proteobacteria	4255	Open in IMG/M
3300017654\|Ga0134069_1025635	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1789	Open in IMG/M
3300017656\|Ga0134112_10189505	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	801	Open in IMG/M
3300017657\|Ga0134074_1342781	Not Available	550	Open in IMG/M
3300018431\|Ga0066655_10037954	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples → uncultured Gemmatimonadaceae bacterium	2403	Open in IMG/M
3300018431\|Ga0066655_11038059	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	569	Open in IMG/M
3300018433\|Ga0066667_10022014	All Organisms → cellular organisms → Bacteria	3413	Open in IMG/M
3300018468\|Ga0066662_11347909	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	735	Open in IMG/M
3300018482\|Ga0066669_10865054	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	806	Open in IMG/M
3300019789\|Ga0137408_1059275	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	698	Open in IMG/M
3300021151\|Ga0179584_1412896	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	502	Open in IMG/M
3300025905\|Ga0207685_10085606	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300025910\|Ga0207684_10264896	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1483	Open in IMG/M
3300025922\|Ga0207646_10127592	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2288	Open in IMG/M
3300025922\|Ga0207646_11217366	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	660	Open in IMG/M
3300026277\|Ga0209350_1063022	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1054	Open in IMG/M
3300026298\|Ga0209236_1248901	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	588	Open in IMG/M
3300026306\|Ga0209468_1175960	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	541	Open in IMG/M
3300026307\|Ga0209469_1048009	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1355	Open in IMG/M
3300026314\|Ga0209268_1018204	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2622	Open in IMG/M
3300026324\|Ga0209470_1151953	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1016	Open in IMG/M
3300026324\|Ga0209470_1194096	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	865	Open in IMG/M
3300026327\|Ga0209266_1304328	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	501	Open in IMG/M
3300026329\|Ga0209375_1075744	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1577	Open in IMG/M
3300026331\|Ga0209267_1035719	All Organisms → cellular organisms → Bacteria	2340	Open in IMG/M
3300026332\|Ga0209803_1347930	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	514	Open in IMG/M
3300026334\|Ga0209377_1100986	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1196	Open in IMG/M
3300026538\|Ga0209056_10171152	All Organisms → cellular organisms → Bacteria	1630	Open in IMG/M
3300026538\|Ga0209056_10216013	Not Available	1389	Open in IMG/M
3300026538\|Ga0209056_10708803	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	509	Open in IMG/M
3300026550\|Ga0209474_10405513	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	709	Open in IMG/M
3300026550\|Ga0209474_10546113	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	589	Open in IMG/M
3300028536\|Ga0137415_11091692	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	611	Open in IMG/M
3300031716\|Ga0310813_11980239	Not Available	549	Open in IMG/M
3300031720\|Ga0307469_10499186	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300031720\|Ga0307469_10873555	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	831	Open in IMG/M
3300031720\|Ga0307469_11016548	Not Available	775	Open in IMG/M
3300031740\|Ga0307468_102488188	Not Available	507	Open in IMG/M
3300031820\|Ga0307473_10019862	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2708	Open in IMG/M
3300032180\|Ga0307471_103122246	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	587	Open in IMG/M
3300032205\|Ga0307472_101015940	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	778	Open in IMG/M
3300033004\|Ga0335084_10941288	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	872	Open in IMG/M
3300033004\|Ga0335084_12105070	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	548	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.74%
Host-Associated	Host-Associated	5.26%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.48%
Plants	Host-Associated → Plants	5.26%
Aquatic	Environmental → Aquatic	2.26%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.51%
Marine	Environmental → Aquatic → Marine	1.50%
Freshwater	Environmental → Aquatic → Freshwater	0.75%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.93%
Loam	Environmental → Terrestrial → Soil → Loam	18.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.51%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.50%
Lake	Environmental → Aquatic → Freshwater → Lake	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	37.59%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.03%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.51%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.50%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.75%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	27.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.28%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	9.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	7.52%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.26%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.51%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.26%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.50%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.50%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.75%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.75%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004022	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300021151	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025535	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1 (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25382J43887_100679863	3300002908	Grasslands Soil	MRLRLGAAAGAAIVLVGXXGAPTLPVMIGATLAYAWLLWRAVGAR*
Ga0055432_100764252	3300004022	Natural And Restored Wetlands	MRVRMAAAASAAIILVGLLGAPVVPVMIGTTIAYAWLVGRSVAAR*
Ga0066674_100704702	3300005166	Soil	MRLRLGAAVGAAIVLVGILGAPTLPVMIGATLAYAWLLWRAVGAR*
Ga0066674_102353303	3300005166	Soil	MRLRLGAAAGAAIVLVGVIGAPALPVMIGATLAYAWLLWRAVGAR*
Ga0066672_110345911	3300005167	Soil	PREGRGMRLRLGAAAGAAIVLVGVIGAPTLPVMIGATLAYAWLLWRAVGAR*
Ga0066677_106066872	3300005171	Soil	MRLRLGAAAGAAIVLVGVIGAPTLPVMIGATLAYAWLLWRAVGAR*
Ga0066683_100076085	3300005172	Soil	MRLRLGAAACVAIVLVGIAGAPVLPVMIGASVAYAWLVLRVLATR*
Ga0066683_104066723	3300005172	Soil	MRLRLGAAAGAAIVLVGILGAPTLPVMIGASLAYAWLLWRAVGAR*
Ga0066680_103790632	3300005174	Soil	MKLRLGAAACAAIVLVGVMGAPALPVMIGATAAYAWLLWRANVVRSGPEEER*
Ga0066680_109654451	3300005174	Soil	MRLRLGAAAGAAIVLVGIIGAPTLPVMIGATLAYAWLLWRAVGAR*
Ga0066688_109534702	3300005178	Soil	MRLRLGAAAGVAIVLVGILGAPTLPVMIGATLAYAWLLWRAVGAR*
Ga0066685_101269773	3300005180	Soil	MKLRLGAAACAAVVLVGLMGAPALPVMIGATAAYAWLLWRAIATR*
Ga0066685_102941062	3300005180	Soil	MKLRLGAAACAAIVLVPVMGAPALPVMIGATAAYAWLLWRATSARPGREEER*
Ga0066676_103408753	3300005186	Soil	MRLRLGAAAGAAIVLVGILGAPTLPVMIGATLAYAWLLWRAVGAR*
Ga0066676_110833601	3300005186	Soil	MRLRLAATTSAAIVMVGVLGAPVMPVMIGASIAYAWLVWRAL
Ga0066388_1003052393	3300005332	Tropical Forest Soil	MKLRLGAATCAAIVLVSVMGAPVLPVMIGATAAYAWLLWRASAVRPGREEER*
Ga0066388_1017998262	3300005332	Tropical Forest Soil	MRLRLAAVAATAIVLIGMLGAPVLPVMIGGTLAYGWLLWRSVAIR*
Ga0066388_1029463582	3300005332	Tropical Forest Soil	MRLRLGAAAAAAIVLIGVFGAPALPVMIGATAAYGWLLWRSIATR*
Ga0066388_1034993321	3300005332	Tropical Forest Soil	MRLRLGAATCAAIVLVGVMGAPVLPVMIGATAAYAWLLWRASS
Ga0066388_1080557922	3300005332	Tropical Forest Soil	MRVRLAAATGAVIVLIAVLGAPVLPVMIGASGAYAWLIWRAAAAR*
Ga0066388_1083375362	3300005332	Tropical Forest Soil	MRVRLAAATCAVIVLVAVVGAPVLPVMIGATGAYAWLIWRAAAAR*
Ga0070680_1017211982	3300005336	Corn Rhizosphere	MRTRLAAALCAAIVLVGVVGAPAVPVMIGATVAYGWLLWRAVASR*
Ga0070708_1007184652	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MKLRLGAAACAAIVLVCVMGAPALPVMIGATAAYAWLLWRATSARPGREEER*
Ga0070708_1007189672	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VRLRLGAALCAAIVLVVMVGAPAVPVMIGATAAYAWLLWRATASR*
Ga0066686_101984963	3300005446	Soil	MRLRLGAAASAAIVLVGVIGAPTLPVMIGATLAYAWLLWRAVGAR*
Ga0066686_109923062	3300005446	Soil	VRVRIAAATSAALVLVGLLGAPALPVLGGIALAYGWLLWRELASR*
Ga0066689_103334392	3300005447	Soil	MRLRLGAAAGAAIVLVGVVGAPTLPVMIGATLAYAWLLWRAVGAR*
Ga0070706_1014487012	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VRLRLGAALCAAIVLVVMVGAPAVPVMIGVTAAYAWLLWRATASR*
Ga0070707_1002840423	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRLRLGAAAAAAILLVGVLGAPPLSVMIGATAAYAWLLWRSVASR*
Ga0070707_1008731722	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MMRFRLGAGAIAAIVLVGLVGAPVLPVMIGATAAYAWLLWKAVATR*
Ga0070699_1006496612	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MRLRLGAAAAAAILLVGVLGAPTLPVMIGSTAAYAWLLWRSVASR*
Ga0070741_1000813216	3300005529	Surface Soil	MRLRLGATVSAAIVLVGVLGAPVVPVMVGATAAYAWLLWRSRAPT*
Ga0070697_1001466812	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRLRLAAAASAAIVMVGLLGAPALPVMIGATAAYVWLLWKSLARS*
Ga0070697_1002360962	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRFRLGAGAIAAIVLVGLVGAPVLPVMIGATAAYAWLLWKAVATR*
Ga0070697_1004813553	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRLRLGAAAAAAILLVGVLGAPPLPVMIGATAAYVLLLWRSVASR*
Ga0070697_1008931473	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VLVCVMGAPALPVMIGATAAYAWLLWRATSARPGREEER*
Ga0066692_103252222	3300005555	Soil	MRLRLGAAAGAAFVLVGVIGAPTLPVMIGATLAYAWLLWRAVGAR*
Ga0066692_105459313	3300005555	Soil	GAAVGAAIVLVGILGAPTLPVMIGATLAYAWLLWRAVGAR*
Ga0066692_106419321	3300005555	Soil	AIVLVGIAGAPVLPVMIGASVAYAWLVLRVLATR*
Ga0066693_102219941	3300005566	Soil	WPREERGMRLRLGAAVGAAIVLVGILGAPTLPVMIGATLAYAWLLWRAVGAR*
Ga0066703_107021302	3300005568	Soil	MKLRLGAAACAAIVLVGVMGAPALPVMIGATAAYAWLLW
Ga0066903_1002994164	3300005764	Tropical Forest Soil	MKLRLGAAACAAIVLVGVMGAPALPVMIGATAAYAWLLWRASAARPGHEEER*
Ga0066696_106151033	3300006032	Soil	MRLRLGAAACVAIVLVGIAGAPVLPVMIGASVAYAWLVLRVL
Ga0070715_101855903	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MKLRLGAAACAAIVLVGVMGAPALPVMIGATAAYAWLLWRATSARPGREEER*
Ga0066659_113817201	3300006797	Soil	MRLRLGAAACVAIVLVGIAGAPVLPVMIGASVAYAWL
Ga0075433_114572711	3300006852	Populus Rhizosphere	TAIVLIGMLGAPVLPVMIGGTLAYGWLLWRSVAIR*
Ga0075425_1001334894	3300006854	Populus Rhizosphere	MRVRLAAATCAAIVLIGILGAPALPVMIGATGAYALLIWRAVATR*
Ga0075425_1007463824	3300006854	Populus Rhizosphere	MKLRLGAAACAAIVLVCVMGAPALPVMIGATAAYAWLLWRATSARPG
Ga0075425_1010579092	3300006854	Populus Rhizosphere	MKLRLGAAACAAIVLVGVMGAPALPVMIGATAAYAWLLWRASAARPGTEEER*
Ga0075434_1004361701	3300006871	Populus Rhizosphere	MRLRLGAATAAALVLVGIVGAPVLPVMIGATVAYALLLWRGAMRS*
Ga0066710_1003970904	3300009012	Grasslands Soil	MKLRLGAATCTAIVLIGVFGAPALPVMIGATAAYAWLLWRAVATR
Ga0066710_1011914582	3300009012	Grasslands Soil	MRLRLAAAASAAIVMVGVLGAPVLPVMVGATAAYVWLIWRSLARS
Ga0066710_1030087632	3300009012	Grasslands Soil	MKLRLGAAACAAVVLVGLMGAPALPVMIGASAAYAWLLWGAIASR
Ga0066710_1042770102	3300009012	Grasslands Soil	MRVTLAATTSAVIVLVGLLGAPALPVMIGATGTWAWLVWRAVATRRRI
Ga0099829_102219952	3300009038	Vadose Zone Soil	MRFRLGAGAIAAIVLVGLVGAPVLPVMIGATAGYALRL*
Ga0099828_100349591	3300009089	Vadose Zone Soil	AAIVLVVMVGAPAVPVMIGATAAYAWLLWRATASR*
Ga0099827_107306992	3300009090	Vadose Zone Soil	MKLRLGAVVCATIVLVGVFGAPVLPVMIGATAAYAWLLWTAASSR*
Ga0066709_1013144023	3300009137	Grasslands Soil	MRFRLGAAVSAAIVLVGVVGAPTLPVMIGATLAYAWLLWRAVGAR*
Ga0114129_108274082	3300009147	Populus Rhizosphere	MRLRLGAATAAAVVLVGIVGAPVLPVMIGATVAYALLLWRGAVRS*
Ga0134109_101329572	3300010320	Grasslands Soil	MRLRLGAAAGAAIVLVGVIGAPSLPVMIGATLAYAWLLWRAVGAR*
Ga0134109_102250163	3300010320	Grasslands Soil	GAAACAAIVLVGVMGAPALPVMIGATAAYAWLLWRANVVRSGPEEER*
Ga0134080_101553591	3300010333	Grasslands Soil	MRLRLGAAACVAIVLVGITGAPVLPVMIGASVAYAWLVLRVLATR*
Ga0126370_120718321	3300010358	Tropical Forest Soil	MKLRLGAATCAAIVLVSVMGAPVLPVMIGATAAYAWLLWRASAVRPGREE
Ga0136847_117451583	3300010391	Freshwater Sediment	MRLAATLSAVIVLIGIAGAPAMPVMLGAAAAYGWLLWRAAASR*
Ga0126383_111133212	3300010398	Tropical Forest Soil	AAAACAAIVLIGVMGAPAVPVMIGATGAYAWLVYRAVATRRRHGRAPL*
Ga0126383_127831422	3300010398	Tropical Forest Soil	MRVRLAAATCAAIVLVAVLGAPVLPVMIGATAAYGWLVWRAVATR*
Ga0137392_110513432	3300011269	Vadose Zone Soil	RLGAAVCAAIVLVVMVGAPAVPVMIGATAAYAWLLWRATASR*
Ga0137391_102296172	3300011270	Vadose Zone Soil	MRLRLGAAAMVALVLIGVLGAPALPVMIGATVAYAWLLWRSVATR*
Ga0137393_109834451	3300011271	Vadose Zone Soil	RLGAGAIAAIVLVGLVGAPVLPVMIGATAAYAWLLWKAVATR*
Ga0137389_107531472	3300012096	Vadose Zone Soil	MRLRLGAAVSAAIVLVGVIGAPTLPVMIGATLAYAWLLWRTVGAR*
Ga0137388_100429264	3300012189	Vadose Zone Soil	VRLRLGAAVCAAIVLVVMVGAPAVPVMIGATAAYAWLLWRATASR*
Ga0137388_113699961	3300012189	Vadose Zone Soil	MKLRLGAVVCATIVLVGVFGAPVLPVMIGATAAYAWLLWT
Ga0137388_117011072	3300012189	Vadose Zone Soil	MRLRLGAATGAAIVLVGILGAPTLPVMIGATLAYAWLLWRTVGAR*
Ga0137399_108929873	3300012203	Vadose Zone Soil	LGAAAGAAIVLVGILGAPTLPVMIGATLAYAWLLWRAVGAR*
Ga0137380_109475081	3300012206	Vadose Zone Soil	MRLRLGAAAGGAIVLVGVIGAPTLPVMIGATLAYAWLLWRAVGAR*
Ga0137380_111282231	3300012206	Vadose Zone Soil	AVCAAVLLVGAMGAPALPVMIGATAAYAWLLWRAIATR*
Ga0137379_105500402	3300012209	Vadose Zone Soil	MRLRLGAAVGAAIVLVGVIGAPTLPVMIGATLASAWLLWRAVGAR*
Ga0137378_116410751	3300012210	Vadose Zone Soil	AVCAAVVLVGVMGAPVLPVMIGATAAYAWLLWRAIATR*
Ga0137377_110288961	3300012211	Vadose Zone Soil	AAAGAAIVLVGIIGAPTLPVMIGATLAYAWLLWRAVGAR*
Ga0137361_102568504	3300012362	Vadose Zone Soil	VKLRLGAALGATIVLVGMMGAPTLPVMIGITAGYAWLLFGSPLL
Ga0137361_107390292	3300012362	Vadose Zone Soil	MKLRLGAAASAAVVLVGLMGAPALPVMIGATAAYAWLLWRAIATR*
Ga0137361_115210142	3300012362	Vadose Zone Soil	MRLRLGAAVGAAIVLVGILGAPTLPVMIGATLAYAWL
Ga0137390_119160652	3300012363	Vadose Zone Soil	AVVALVLIGVLGAPALPVMIGATVAYAWLLWRSVATR*
Ga0137359_103126214	3300012923	Vadose Zone Soil	AAIVLVGVVGAPTLPVMIGATLAYAWLLWRTVGAR*
Ga0137404_102936303	3300012929	Vadose Zone Soil	ACAAIVLVGVMGAPALPVMIGATAAYAWLLWRANVVRSGPEEER*
Ga0134076_101267362	3300012976	Grasslands Soil	MRLRLGAAASVAIVLVGVIGAPTLPVMIGATLAYAWLLWRAVGAR*
Ga0134079_107046482	3300014166	Grasslands Soil	MKLRLGAAACTAIVLVGVMGAPALPVMIGATAAYAWLLWRANVVRSGPEEER*
Ga0134073_101479481	3300015356	Grasslands Soil	MRLRLGAAAGAAIVLVGVVGAPTLPVMIGATLAYAWLLWRTVGAR*
Ga0134089_104819352	3300015358	Grasslands Soil	MKLRLGAAACAAIVLVGVMGAPALPVMIGATAAYAWLLWRANTARSGPEEER*
Ga0132258_102592763	3300015371	Arabidopsis Rhizosphere	MRLRLGAVAATAIVLIGMLGAPVLPVMIGGTLAYGWLLWRSVAIR*
Ga0134069_10256351	3300017654	Grasslands Soil	MRLRLGAAASAAIVLVGVIDAPTLPVMIGATLAYAWLLWRAVGAR
Ga0134112_101895051	3300017656	Grasslands Soil	MKLRLGAAACAAIVLVPVMGAPALPVMIGATAAYAWLLWRAIATR
Ga0134074_13427811	3300017657	Grasslands Soil	AGNRPRMKLRLGAAACAAIVLVGVMGAPALPVMIGATAAYAWLLWRANVVRSGPEEER
Ga0066655_100379542	3300018431	Grasslands Soil	MRLRLGAAACVAIVLVGIAGAPVLPVMIGASVAYAWLVLRVLATR
Ga0066655_110380591	3300018431	Grasslands Soil	MRLRLGAAVGAAIVLVGILGAPTLPVMIGATLAYAWLLWRAVGAR
Ga0066667_100220144	3300018433	Grasslands Soil	MKLRLGAAACAAIVLVGVMGAPALPVMIGATAAYAWLLWRANVVRSGPEEER
Ga0066662_113479092	3300018468	Grasslands Soil	MRLRLGAAAGAAIVLVGVIGAPTLPVMIGATLAYAWLLWRAVGAR
Ga0066669_108650542	3300018482	Grasslands Soil	MRLRLGAAVGAAIVLVGILGAPTPPVMIGATLAYAWLLWRAVGAR
Ga0137408_10592752	3300019789	Vadose Zone Soil	MRLRLGAAAGAAIVLVGIIGAPTLPVMIGATLAYAWLLWRAVGAR
Ga0179584_14128962	3300021151	Vadose Zone Soil	LGAAAGAAIVLVGILGAPTLPVMIGATLAYAWLLWRAVGAR
Ga0207423_10153243	3300025535	Natural And Restored Wetlands	MRVRMAAAASAAIILVGLLGAPVVPVMIGTTIAYAWLVGRSVAAR
Ga0207685_100856063	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MKLRLGAAACAAIVLVGVMGAPALPVMIGATAAYAWLLWRATSARPGREEER
Ga0207684_102648963	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VRLRLGAALCAAIVLVVMVGAPAVPVMIGVTAAYAWLLWRATASR
Ga0207646_101275926	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRLRLGAAAAAAILLVGVLGAPPLSVMIGATAAYAWLLWRSVASR
Ga0207646_112173662	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRLRLGAGAIAAIVLVGLVGAPVLPVMIGATAAYAWLLWKAVATR
Ga0209350_10630224	3300026277	Grasslands Soil	MRLRLGAAAGAAIVLVGVIGAPTLPVMIGATLAYAWLLW
Ga0209236_12489012	3300026298	Grasslands Soil	MRLRLGAAAGAAIVLVGILGAPTLPVMIGATLAYAWLLWRAVGAR
Ga0209468_11759602	3300026306	Soil	MRLRLGAAAGAAIVLVGVIGAPALPVMIGATLAYAWLLWRAVGAR
Ga0209469_10480092	3300026307	Soil	MRLRLGAAAGAAIVLVGVVGAPTLPVMIGATLAYAWLLWRAVGAR
Ga0209268_10182041	3300026314	Soil	MRLRLGAAAGAAIVLVGVVGAPTLPVMIGATLAYAWLLWRAVGTR
Ga0209470_11519532	3300026324	Soil	MRLRLGAAAGAAIVLVGILGAPTLPVMIGASLAYAWLLWRAVGAR
Ga0209470_11940962	3300026324	Soil	MRLRLGAAASAAIVLVGVIGAPTLPVMIGATLAYAWLLWRAVGAR
Ga0209266_13043282	3300026327	Soil	ALPARPREGRGMRLRLGAAAGAAIVLVGVVGAPTLPVMIGATLAYAWLLWRAVGAR
Ga0209375_10757441	3300026329	Soil	MKLRLGAAACTAIVLVGVMGAPALPVMIGATAAYAWLLWR
Ga0209267_10357191	3300026331	Soil	REGRGMRLRLGAAAGAAIVLVGVVGAPTLPVMIGATLAYAWLLWRAVGAR
Ga0209803_13479301	3300026332	Soil	AAIVLVGIIGAPTLPVMIGATLAYAWLLWRAVGAR
Ga0209377_11009862	3300026334	Soil	MRLRLGAAAGAAFVLVGVIGAPTLPVMIGATLAYAWLLWRAVGAR
Ga0209056_101711522	3300026538	Soil	MRLRLGAAVGAAIVLVGILGAPTLPVMIGATLAYAWLLWRAVAAR
Ga0209056_102160132	3300026538	Soil	VAIVLVGIAGAPVLPVMIGASVAYAWLVLRVLATR
Ga0209056_107088032	3300026538	Soil	MRLRLGAAAGAAIVLVGVMGAPTLPVMIGATLAYAWLLWRAVGAR
Ga0209474_104055131	3300026550	Soil	MRLRPGAAACVAIVLVGIAGAPVLPVMIGASVAYAWL
Ga0209474_105461131	3300026550	Soil	MKLRLGAAACAAVVLVGLMGAPALPVMIGATAAYAWLLW
Ga0137415_110916922	3300028536	Vadose Zone Soil	AAIVLVGVIDAPTLPVMIGATLAYAWLLWRAVGAR
Ga0310813_119802392	3300031716	Soil	MRIRLAAALSAAIMLVGIVGAPALPVMLGATVAYGWLLWRAVASR
Ga0307469_104991861	3300031720	Hardwood Forest Soil	QAAVRGRRMRLRLGAAACAAIVLVGILGAPVLPVMIGTSVGYAWLLWRAGSTR
Ga0307469_108735551	3300031720	Hardwood Forest Soil	AIAAIVLVGLVGAPVLPVMIGATAAYAWLLWKAVATR
Ga0307469_110165482	3300031720	Hardwood Forest Soil	MRIRLAAALSAAIVLVGIVGAPALPVMLGATVAYGWLLWRAVASR
Ga0307468_1024881881	3300031740	Hardwood Forest Soil	MRIRLAAALSAAIVLVGIVGAPALPVMLGATVAYGWLLWR
Ga0307473_100198624	3300031820	Hardwood Forest Soil	MMRFRLGAGAIAAIVLVGLVGAPVLPVMIGATAAYAWLLWKAVATR
Ga0307471_1031222462	3300032180	Hardwood Forest Soil	CAAIVLVGILGAPVLPVMIGTSVGYAWLLWRAGSTR
Ga0307472_1010159402	3300032205	Hardwood Forest Soil	MRFRLGAGAIAAIVLVGLVGAPVLPVMIGATAAYAWLLWKAVATR
Ga0335084_109412884	3300033004	Soil	MKLRLAAAACAGVVMVHFVGAPVLPVMVGATIAYAWLLWRAAASR
Ga0335084_121050702	3300033004	Soil	MRLRLGATACAAIVMVGFLHAPVVPVMIGATAAYAWLLWRTLST

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060397

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences