Metagenome / Metatranscriptome Family F060403

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060403
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	59 residues
Representative Sequence	GLDLPEAKKQPADLTEILRASVAAAKGGGRGKSDDGTDEDAEDTKSSAKPKSRRRASA
Number of Associated Samples	104
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.50 %
% of genes near scaffold ends (potentially truncated)	98.50 %
% of genes from short scaffolds (< 2000 bps)	92.48 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (81.955 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (18.045 % of family members)
Environment Ontology (ENVO)	Unclassified (29.323 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.120 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.77% β-sheet: 0.00% Coil/Unstructured: 80.23%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF00561	Abhydrolase_1	48.12
PF12697	Abhydrolase_6	36.09
PF00899	ThiF	9.77
PF05237	Obsolete Pfam Family	1.50
PF01238	PMI_typeI_C	1.50
PF02735	Ku	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG1482	Mannose-6-phosphate isomerase, class I	Carbohydrate transport and metabolism [G]	1.50
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.95 %
Unclassified	root	N/A	18.05 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.95 %
Unclassified	root	N/A	18.05 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.95 %
Unclassified	root	N/A	18.05 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	80.45 %
Unclassified	root	N/A	18.05 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	80.45 %
Unclassified	root	N/A	18.05 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	69.92 %
Unclassified	root	N/A	18.05 %

Name	Rank	Taxonomy	Distribution
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	30.83 %
Unclassified	root	N/A	18.05 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	2.26 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.50 %

Name	Rank	Taxonomy	Distribution
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	21.05 %
Unclassified	root	N/A	18.05 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2.26 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.50 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	21.05 %
Unclassified	root	N/A	18.05 %
Actinomycetospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora	2.26 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.50 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.75 %

Name	Rank	Taxonomy	Distribution
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	21.05 %
Unclassified	root	N/A	18.05 %
Actinomycetospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora	2.26 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.50 %
Actinomadura parvosata	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura parvosata	0.75 %

Name	Rank	Taxonomy	Distribution
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	21.05 %
Unclassified	root	N/A	18.05 %
Actinomycetospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora	2.26 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.50 %
Actinomadura parvosata subsp. kistnae	subspecies	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura parvosata → Actinomadura parvosata subsp. kistnae	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573004\|GZGWRS401C4DPD	Not Available	539	Open in IMG/M
2189573004\|GZGWRS401EQ5KY	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	512	Open in IMG/M
3300002568\|C688J35102_120900939	All Organisms → cellular organisms → Bacteria	2144	Open in IMG/M
3300005162\|Ga0066814_10006175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1318	Open in IMG/M
3300005332\|Ga0066388_101129249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1331	Open in IMG/M
3300005332\|Ga0066388_104675302	Not Available	697	Open in IMG/M
3300005334\|Ga0068869_100241831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1438	Open in IMG/M
3300005338\|Ga0068868_100360930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1246	Open in IMG/M
3300005338\|Ga0068868_100719627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	894	Open in IMG/M
3300005343\|Ga0070687_100728097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	696	Open in IMG/M
3300005434\|Ga0070709_10500947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	922	Open in IMG/M
3300005435\|Ga0070714_100659722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1007	Open in IMG/M
3300005435\|Ga0070714_100950118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	835	Open in IMG/M
3300005435\|Ga0070714_101453562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	669	Open in IMG/M
3300005435\|Ga0070714_101709754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	614	Open in IMG/M
3300005436\|Ga0070713_100292912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1496	Open in IMG/M
3300005436\|Ga0070713_101503263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	653	Open in IMG/M
3300005436\|Ga0070713_101633679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	625	Open in IMG/M
3300005436\|Ga0070713_101804761	Not Available	593	Open in IMG/M
3300005437\|Ga0070710_11344482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	532	Open in IMG/M
3300005438\|Ga0070701_10025154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2887	Open in IMG/M
3300005439\|Ga0070711_100852107	Not Available	775	Open in IMG/M
3300005439\|Ga0070711_100991342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	720	Open in IMG/M
3300005439\|Ga0070711_101269321	Not Available	638	Open in IMG/M
3300005445\|Ga0070708_102013896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	535	Open in IMG/M
3300005471\|Ga0070698_101923296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	545	Open in IMG/M
3300005543\|Ga0070672_100068396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2817	Open in IMG/M
3300005614\|Ga0068856_102328147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	544	Open in IMG/M
3300005617\|Ga0068859_100113011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2779	Open in IMG/M
3300005764\|Ga0066903_105384295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	676	Open in IMG/M
3300005842\|Ga0068858_100337696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1441	Open in IMG/M
3300006163\|Ga0070715_10077224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1503	Open in IMG/M
3300006163\|Ga0070715_10992458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	523	Open in IMG/M
3300006175\|Ga0070712_100950101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	742	Open in IMG/M
3300006175\|Ga0070712_100992151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	726	Open in IMG/M
3300006175\|Ga0070712_101613579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	567	Open in IMG/M
3300006755\|Ga0079222_10685736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	806	Open in IMG/M
3300006854\|Ga0075425_100589648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1278	Open in IMG/M
3300006904\|Ga0075424_100632747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1142	Open in IMG/M
3300006904\|Ga0075424_101736869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	660	Open in IMG/M
3300006954\|Ga0079219_12322591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	519	Open in IMG/M
3300009012\|Ga0066710_102870623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	678	Open in IMG/M
3300009093\|Ga0105240_10262012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1994	Open in IMG/M
3300009098\|Ga0105245_11609967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	701	Open in IMG/M
3300009551\|Ga0105238_12718422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora	531	Open in IMG/M
3300010048\|Ga0126373_10799426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1005	Open in IMG/M
3300010048\|Ga0126373_12602591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	564	Open in IMG/M
3300010152\|Ga0126318_10336238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1232	Open in IMG/M
3300010154\|Ga0127503_11060163	Not Available	630	Open in IMG/M
3300010335\|Ga0134063_10728810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	515	Open in IMG/M
3300010358\|Ga0126370_12325519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	531	Open in IMG/M
3300010371\|Ga0134125_11802285	Not Available	666	Open in IMG/M
3300010373\|Ga0134128_12581672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	560	Open in IMG/M
3300010375\|Ga0105239_11187775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	879	Open in IMG/M
3300010396\|Ga0134126_11096531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	888	Open in IMG/M
3300010396\|Ga0134126_12162776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	607	Open in IMG/M
3300010397\|Ga0134124_12113782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	602	Open in IMG/M
3300012210\|Ga0137378_10296109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1505	Open in IMG/M
3300012351\|Ga0137386_10206188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1412	Open in IMG/M
3300012351\|Ga0137386_11027768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	585	Open in IMG/M
3300012356\|Ga0137371_10493737	Not Available	945	Open in IMG/M
3300012393\|Ga0134052_1122403	Not Available	612	Open in IMG/M
3300012496\|Ga0157353_1045183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	519	Open in IMG/M
3300012961\|Ga0164302_10609975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	793	Open in IMG/M
3300012984\|Ga0164309_11332916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	609	Open in IMG/M
3300012987\|Ga0164307_10670465	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300013297\|Ga0157378_10080046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2951	Open in IMG/M
3300013308\|Ga0157375_10088773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3147	Open in IMG/M
3300014745\|Ga0157377_10334254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1011	Open in IMG/M
3300015373\|Ga0132257_100654061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1302	Open in IMG/M
3300016341\|Ga0182035_10284711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1349	Open in IMG/M
3300016445\|Ga0182038_11370351	Not Available	633	Open in IMG/M
3300017946\|Ga0187879_10309251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	877	Open in IMG/M
3300020080\|Ga0206350_10783598	Not Available	711	Open in IMG/M
3300021403\|Ga0210397_10557226	Not Available	872	Open in IMG/M
3300021478\|Ga0210402_10992309	Not Available	766	Open in IMG/M
3300021560\|Ga0126371_12992375	Not Available	572	Open in IMG/M
3300024323\|Ga0247666_1091159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	606	Open in IMG/M
3300025321\|Ga0207656_10693739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	521	Open in IMG/M
3300025898\|Ga0207692_10623216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	695	Open in IMG/M
3300025899\|Ga0207642_11031473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	530	Open in IMG/M
3300025903\|Ga0207680_10921741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	626	Open in IMG/M
3300025911\|Ga0207654_11079535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	585	Open in IMG/M
3300025915\|Ga0207693_10282426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1301	Open in IMG/M
3300025915\|Ga0207693_10356154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1145	Open in IMG/M
3300025915\|Ga0207693_10987132	Not Available	643	Open in IMG/M
3300025928\|Ga0207700_10886699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	798	Open in IMG/M
3300025928\|Ga0207700_11586406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	579	Open in IMG/M
3300025929\|Ga0207664_10118401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2212	Open in IMG/M
3300025929\|Ga0207664_10229466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1613	Open in IMG/M
3300025929\|Ga0207664_10406605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1211	Open in IMG/M
3300025929\|Ga0207664_10960691	Not Available	766	Open in IMG/M
3300025931\|Ga0207644_11482176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura parvosata → Actinomadura parvosata subsp. kistnae	570	Open in IMG/M
3300025932\|Ga0207690_10285707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1286	Open in IMG/M
3300025939\|Ga0207665_10185804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1508	Open in IMG/M
3300026078\|Ga0207702_10061503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3203	Open in IMG/M
3300027765\|Ga0209073_10107609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	991	Open in IMG/M
3300028791\|Ga0307290_10209253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	715	Open in IMG/M
3300028828\|Ga0307312_10457885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	840	Open in IMG/M
3300031543\|Ga0318516_10103302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1612	Open in IMG/M
3300031573\|Ga0310915_10420230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	950	Open in IMG/M
3300031718\|Ga0307474_10527984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	927	Open in IMG/M
3300031719\|Ga0306917_10629545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	844	Open in IMG/M
3300031736\|Ga0318501_10136193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1254	Open in IMG/M
3300031748\|Ga0318492_10492928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	649	Open in IMG/M
3300031764\|Ga0318535_10359303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	651	Open in IMG/M
3300031770\|Ga0318521_10157050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1294	Open in IMG/M
3300031770\|Ga0318521_10791133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	578	Open in IMG/M
3300031780\|Ga0318508_1095674	Not Available	822	Open in IMG/M
3300031821\|Ga0318567_10785062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	540	Open in IMG/M
3300031821\|Ga0318567_10893721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	503	Open in IMG/M
3300031938\|Ga0308175_102877515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	537	Open in IMG/M
3300031939\|Ga0308174_11075154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	684	Open in IMG/M
3300031945\|Ga0310913_10824929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	654	Open in IMG/M
3300031947\|Ga0310909_11127523	Not Available	636	Open in IMG/M
3300031954\|Ga0306926_10248318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2205	Open in IMG/M
3300031996\|Ga0308176_12975536	Not Available	502	Open in IMG/M
3300032041\|Ga0318549_10200518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	896	Open in IMG/M
3300032043\|Ga0318556_10316448	Not Available	816	Open in IMG/M
3300032059\|Ga0318533_11167246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	564	Open in IMG/M
3300032060\|Ga0318505_10233250	Not Available	865	Open in IMG/M
3300032063\|Ga0318504_10493256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	586	Open in IMG/M
3300032066\|Ga0318514_10405736	Not Available	723	Open in IMG/M
3300032076\|Ga0306924_12314695	Not Available	544	Open in IMG/M
3300032089\|Ga0318525_10482766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	634	Open in IMG/M
3300032770\|Ga0335085_10242768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2171	Open in IMG/M
3300032770\|Ga0335085_10720146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1107	Open in IMG/M
3300032770\|Ga0335085_11250019	Not Available	786	Open in IMG/M
3300032770\|Ga0335085_11965398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora	594	Open in IMG/M
3300032828\|Ga0335080_10315090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1695	Open in IMG/M
3300032898\|Ga0335072_10771368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	926	Open in IMG/M
3300033004\|Ga0335084_10407964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1400	Open in IMG/M
3300033158\|Ga0335077_12218910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora	504	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.20%
Host-Associated	Host-Associated	18.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.95%
Plants	Host-Associated → Plants	18.80%
Aquatic	Environmental → Aquatic	2.26%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.28%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.52%
Freshwater	Environmental → Aquatic → Freshwater	2.26%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.11%
Loam	Environmental → Terrestrial → Soil → Loam	27.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.27%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.77%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.02%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.01%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.50%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	24.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.05%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.77%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.01%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.26%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.26%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.50%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.75%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	18.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.54%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.02%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	6.02%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.76%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.01%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.01%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.01%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.01%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.26%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.26%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.26%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.26%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.50%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	1.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.50%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.75%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.75%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012393	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012496	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.090610	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024323	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FG2_08679430	2189573004	Grass Soil	VVEAKVEGNDIVRPSGLDLPETRKQPADLTEILRASVAAAKGGRGKSDEDDEDGKDDKPSSKSGTKAKPRRKASA
FG2_07661920	2189573004	Grass Soil	PADLTEILRASVAAAKGGRGKSDDGKSDDGKDKPEAKSTAKAKPRRRASA
C688J35102_1209009391	3300002568	Soil	PADLTEILRASVAAAKGGGRGKSGEAKQDKAEAKEAKPKPRRRASA*
Ga0066814_100061752	3300005162	Soil	KKQPADLTEILRASVAAVKGGRGQSGEDSDDEPGSSKSGAKPRTRRQASA*
Ga0066388_1011292491	3300005332	Tropical Forest Soil	DAKKQPADLTEILRASVAAAKGGRGKSDEDDTSSSGSKAKPRRKASA*
Ga0066388_1046753022	3300005332	Tropical Forest Soil	DAKKQPADLTEILRASVAAAKGGRGKSDEDDKPSSGSKAKPRRKASA*
Ga0068869_1002418311	3300005334	Miscanthus Rhizosphere	LTEILRASVAAAKGGGRGKSDDGTDEDTKDTKDTKDGAKSKSRRKASA*
Ga0068868_1003609302	3300005338	Miscanthus Rhizosphere	GLDLPEAKKQPADLTEILRASVAAAKGGGRGKSDDGTDEDTKDTKDTKDGAKSKSRRKASA*
Ga0068868_1007196271	3300005338	Miscanthus Rhizosphere	GLDLPEAKKQPADLTEILRASVAAAKGGGRGKSDDGTDEDAEDTKSSAKPKSRRRASA*
Ga0070687_1007280972	3300005343	Switchgrass Rhizosphere	AKIEGNDIVRPDGLDLPEAKKQPADLTEILRASVAAAKGGGRGKSDDGTDEDAEDTKSSAKPKSRRRASA*
Ga0070709_105009471	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	DIVRPDGLDLPEAKKQPADLTEILRASVAAAKGGGRGKSGEDSADDEDGKPSSKSGSKAKPSRKASA*
Ga0070714_1006597221	3300005435	Agricultural Soil	EGNDIVRPDGLDLPEAKKQPADLTEILRASVAAAKGGGRGKSGEDSADDEDGKPSSKSGSKAKPSRKASA*
Ga0070714_1009501181	3300005435	Agricultural Soil	VVQAKVEGNDVVRPDGLDLPEDRKQPADLTEILRASVAAAKGGRGKSDDKESDDAKPAAKPKPRRRASA*
Ga0070714_1014535621	3300005435	Agricultural Soil	VVQAKVEGNDVVRPDGLDLPEDRKQPADLTEILRASVAAAKGGGRGKSDDKESADKDRDDAKPAAKPKPRRRASA*
Ga0070714_1017097541	3300005435	Agricultural Soil	IEGNDIVRPDGLDLPEAKKQPADLTEILRASVAAAKGGGRGKSDDGTDEDAEDTKSSAKPKSRRRASA*
Ga0070713_1002929121	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	LPEAKKQPADLTEILRASVAAAKGGRGQSDQDEDGKDDKPGSKSGTKAKPRRRASA*
Ga0070713_1015032631	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VEGNDVVRPDGLDLPEDRKQPADLTEILRASVAAAKGGGRGKSDDKESADKDRDDAKPAAKPKPRRRASA*
Ga0070713_1016336792	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	PDGQDLPEAKKQPADLTEILRASVAAAKGGRGKAGEDSEDGKDDKASSKSASKAKPRRKASA*
Ga0070713_1018047612	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	DVPADRKQPADLTEILRASVAAAKGGRGKSDDKDPAGQDRDDAKPAAKAKPRRKASA*
Ga0070710_113444822	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	EAVVQAKIEGNDIVRPDGLDLPEAKKQPADLTEILRASVAAAKGGGRGKSDDGTDEDAEDTKSSAKPKSRRRASA*
Ga0070701_100251545	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	DIVRPDGLDLPEAKKQPADLTEILRASVAAAKGGGRGKSDDGTDEDAEDTKSSAKPKSRRRASA*
Ga0070711_1008521071	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	GLDLPEAKKQPADLTEILRASVAAAKGGGRGKSDEDTEDTEDTKSSAKPKSRRKASA*
Ga0070711_1009913421	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	RPDGLDLPEAKKQPADLTEILRASVAAAKGGGRGKSGEDSADDEDGKPSSKSGSKAKPSRKASA*
Ga0070711_1012693211	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	EILRASVAAAKGGGRGKSDDGTDEDAEDTKSSAKPKSRRRASA*
Ga0070708_1020138961	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	KQPADLTEILRASVAAAKGGGRGKSDDGADEDAEDTKSSAKPKSRRKASA*
Ga0070698_1019232961	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	DLPEAKKQPADLTEILRASVAAVKGGRGKSDDAKDDANDEDTKAKPKPRKASA*
Ga0070672_1000683961	3300005543	Miscanthus Rhizosphere	LRASVAAAKGGGRGKSEDGTDEDAEDTKSSTKPKSRRRASA*
Ga0068856_1023281471	3300005614	Corn Rhizosphere	NDIVRPDGLDLPEAKKQPADLTEILRASVAAAKGGGRGKSDEDTEDTKSSAKPKSRRKASA*
Ga0068859_1001130115	3300005617	Switchgrass Rhizosphere	PEAKKQPADLTEILRASVAAAKGGGRGKSDDGTDEDAEDTKSSAKPKSRRRASA*
Ga0066903_1053842952	3300005764	Tropical Forest Soil	KKQPADLTEILRASVAAVKGGRGTSDDAQDEGQEDAGSGGKPKTRRKASA*
Ga0068858_1003376961	3300005842	Switchgrass Rhizosphere	EAKKQPADLTEILRASVAAAKGGGRGKSDDGTDEDTEDTEDTKSSAKPKSRRKASA*
Ga0070715_100772243	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	LEAVVQAKVEGNDVVRPDGLDVPQDRKQPADLTEILRASVAAAKGGRGKSDDKESDDAKPAAKPKPRRRASA*
Ga0070715_109924581	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	EAKKQPADLTEILRASVAAAKGGRGKSGEGDEDGKDDKASSKSASKAKPRRKASA*
Ga0070712_1009501012	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	EAKKQPADLTEILRASVAAAKGGGRGKSDEDTEDTKSSAKPKSRRKASA*
Ga0070712_1009921511	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	IVRPDGLDLPEAKKQPADLTEILRASVAAAKGGRGQSDQDEDGKDDKPGSKSGTKAKPRRRASA*
Ga0070712_1016135791	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	PADLTEILRASVAAAKGGGRGKSDDGTDEDTEDAKSSAKPKSRRKASA*
Ga0079222_106857362	3300006755	Agricultural Soil	GLDLPEAKKQPADLTEILRASVAAAKGGGRGKSDEDTEDSKSSAKPKSRRKASA*
Ga0075425_1005896483	3300006854	Populus Rhizosphere	EGNDIVRPDGLDLPEAKKQPADLTEILRASVAAAKGGGRGKSDDGTDEDAEDTKSSTKPKSRRRASA*
Ga0075424_1006327472	3300006904	Populus Rhizosphere	AVVQAKIEGNDIVRPDGLDLPEAKKQPADLTEILRASVAAAKGGGRGKSDDGTDEDAEDTKSSAKPKSRRRASA*
Ga0075424_1017368692	3300006904	Populus Rhizosphere	AVVQAKIEGNDIVRPDGLDLPEAKKQPADLTEILRASVAAAKGGRGKSGEDDEDGKDSAKSASKAKPRKASA*
Ga0079219_123225911	3300006954	Agricultural Soil	LPEAKKQPADLTEILRASVAAAKGGRGKSGEDSGGDEDGKDDKASSKSAGKPKPRRKASA
Ga0066710_1028706231	3300009012	Grasslands Soil	AVVQAKIEGNDIVRPDGLDLPEAKKQPADLTEILRASVAAAKGGRGQSDQDEDGQDDKPSSKSGTKAKPRRRASA
Ga0105240_102620121	3300009093	Corn Rhizosphere	GNDIVRPDGLDLPEAKKQPADLTEILRASVAAAKGGGRGKSDDGTDEDTEDTEDTKSGAKPKSRRKASA*
Ga0105245_116099672	3300009098	Miscanthus Rhizosphere	VRPDGLDLPEAKKQPADLTEILRASVAAAKGGGRGKSDDATDEDTEDTKASAKPKSRRKASA*
Ga0105238_127184221	3300009551	Corn Rhizosphere	LPEAKKQPADLTEILRASVAAAKGGGRGKSGEDSADDEDGKPSSKSGSKAKPSRKASA*
Ga0126373_107994262	3300010048	Tropical Forest Soil	VQAKIEGNDIVRPSGVDLPDAKKQPADLTEILRASVAAVKGGRGQPDEASQDEASQEEKGSSKSKTRRQASA*
Ga0126373_126025912	3300010048	Tropical Forest Soil	EAVVEAKVAGNDIVRPSGLDLPDAKKQPADLTEILRASVAAVKGGRGKPDGAEDDDQGDATAKSSTKAKTRRQASA*
Ga0126318_103362381	3300010152	Soil	KKQPADLTEILRASVAAAKGGGRGKSDDATDEDAEDTKSSAKPKSRRKASA*
Ga0127503_110601631	3300010154	Soil	DIVRPDGLDLPEAKKQPANLTEIMRASVAAAKGGGRGKSGEAEDGEAEDEDAKSSAKPKGRRKASA*
Ga0134063_107288102	3300010335	Grasslands Soil	AVVQAKIEGNDIVRPDGLDLPEAKKQPADLTEILRASVAAAKGGRGKSDEDDEGGESGDKPSSKSGTKAKPRRKASA*
Ga0126370_123255191	3300010358	Tropical Forest Soil	GLDLPDAKKQPADLTAILRASVAAVKGGRGKPDGAEDDDQDDATAKSSTKAKTRRQASA*
Ga0134125_118022852	3300010371	Terrestrial Soil	LRASVAAAKGGGRGKSGEAEDEDTEGTKSSAKPKSRRKASA*
Ga0134128_125816721	3300010373	Terrestrial Soil	DLTEILRASVAAAKGGGRGKSDDGTDEDAEDTKSSAKPKSRRRASA*
Ga0105239_111877752	3300010375	Corn Rhizosphere	EAKKQPADLTEILRASVAAAKGGGRGKSDDGTEEDAEDTKSSTKPKSRRRASA*
Ga0134126_110965311	3300010396	Terrestrial Soil	EAKKQPADLTEILRASVAAAKGGGRGKSGEDSADDEDGKPSSKSGSKAKPSRKASA*
Ga0134126_121627761	3300010396	Terrestrial Soil	EAKKQPADLTEILRASVAAAKGGGRGKSDDGTDEDAEDTKSSTKPKSRRRASA*
Ga0134124_121137821	3300010397	Terrestrial Soil	IVRPDGLDLPEAKKQPADLTEILRASVAAAKGGGRGKSDDGADEDAEDTKSSAKPKSRRRASA*
Ga0137378_102961093	3300012210	Vadose Zone Soil	PEAKKQPADLTEILRASVAAAKGGGRGKSDEDTEDTKDTAKPKSRRKASA*
Ga0137386_102061881	3300012351	Vadose Zone Soil	AKKQPADLTEILRASVAAAKGGGRGKSDEDTEDTKDTAKPKSRRKASA*
Ga0137386_110277682	3300012351	Vadose Zone Soil	LDLPEAKKQPADLTEILRASVAAAKGGRGKSGQDDEDEDGKDDKPSSKSGTKAKPRRRASA*
Ga0137371_104937371	3300012356	Vadose Zone Soil	DIVRPDGLDLPEAKKQPADLTEILRASVAAAKGGRGKSGQDDEDEDGKDDKPSSKSGTKAKPRRRASA*
Ga0134052_11224031	3300012393	Grasslands Soil	EAKKQPADLTEILRASVAAAKGGRGKSGQDDEDDAAKDDKPSSKSVTKAKPRRRASA*
Ga0157353_10451832	3300012496	Unplanted Soil	EAKKQPADLTEILRASVAAAKGGGRGKSEDGTDEDAEDTKSSTKPKSRRRASA*
Ga0164302_106099751	3300012961	Soil	DLPEAKKQPADLTEILRASVAAAKGGGRGKSDDGADEDAEDTKSSAKPKSRRRASA*
Ga0164309_113329162	3300012984	Soil	DGLDLPEAKKQPADLTEILRASVAAAKGGRGKSDQDDEDGKDDKPSSKSGTKAKPRRRASA*
Ga0164307_106704652	3300012987	Soil	VAAAKGGGRGKSDDGTDEDAEDTKSSAKPKNRRRASA*
Ga0157378_100800465	3300013297	Miscanthus Rhizosphere	NDIVRPDGLDLPEAKKQPADLTEILRASVAAAKGGGRGKSGEDSADDEDGKPSSKSGSKAKPSRKASA*
Ga0157375_100887731	3300013308	Miscanthus Rhizosphere	DLPEAKKQPADLTEILRASVAAAKGGGRGKSDDGTDEDAEDTKSSTKPKSRRRASA*
Ga0157377_103342542	3300014745	Miscanthus Rhizosphere	ASVAAAKGGGRGKSDDGTDEDAEDTKSSAKPKSRRRASA*
Ga0132257_1006540611	3300015373	Arabidopsis Rhizosphere	VAAAKGGGRGKSEDGTDEDAEDTKSSTKPKSRRRASA*
Ga0182035_102847113	3300016341	Soil	EAVVEAKVAGNDIVRPSGLDLPDAKKQPADLTEILRASVAAVKGGRGKPDGAEDDDQEDATAKSNTKAKTRRKASA
Ga0182038_113703512	3300016445	Soil	RPSGADLPDAKKQPADLTEILRASVAAAKGGRGQPDEAGPDDKAAAKPKTRRRASA
Ga0187879_103092511	3300017946	Peatland	AKVEGNDIVRPDGLDEPETKKQPADLTEILRASVAAAKGGRGNSDTKEKDDAKPAAKAKPRRKASA
Ga0206350_107835981	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	QPADLTEILRASVAAAKGGGRGKSDDGTDEDAEDTKSSTKPKSRRRASA
Ga0210397_105572262	3300021403	Soil	KIEGNDIVRPDGLDLPEAKKQPADLTEILRASVAAAKGGRGKSDEDEDGKDEKPGSKSGTKAKPRRRASA
Ga0210402_109923091	3300021478	Soil	RPDGLDLPEAKKQPADLTEILRASVAAAKGGRGQSDQDEDGKDDKPSSKSGTKAKPRRRASA
Ga0126371_129923751	3300021560	Tropical Forest Soil	DAKKQPADLTEILRASVAAVKGGRGQSDEASQDEKASSKSKTRRQASA
Ga0247666_10911591	3300024323	Soil	IVRPDGLDLPEAKKQPADLTEILRASVAAAKGGGRGKSDDGTDEDAEDTKSSAKPKSRRRASA
Ga0207656_106937392	3300025321	Corn Rhizosphere	PDGLDLPEAKKQPADLTEILRASVAAAKGGGRGKSDDGTDEDAEDTKSSTKPKSRRRASA
Ga0207692_106232162	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	RPDGLDLPEAKKQPADLTEILRASVAAAKGGGRGKSGEDSADDEDGKPSSKSGSKAKPSRKASA
Ga0207642_110314732	3300025899	Miscanthus Rhizosphere	RASVAAAKGGGRGKSDDGTDEDAEDTKSSTKPKSRRRASA
Ga0207680_109217411	3300025903	Switchgrass Rhizosphere	AKIEGNDIVRPDGLDLPEAKKQPADLTEILRASVAAAKGGGRGKSDDGTDEDAEDTKSSAKPKSRRRASA
Ga0207654_110795352	3300025911	Corn Rhizosphere	PADLTEILRASVAAAKGGGRGKSDDGADEDAEDTKSSAKPKSRRRASA
Ga0207693_102824263	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LDLPEAKKQPADLTEILRASVAAAKGGGRGKSDDGTDEDTEDTEDTKSSAKPKSRRKASA
Ga0207693_103561542	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LDLPEAKKQPADLTEILRASVAAAKGGGRGKSGEDSADDEDGKPSSKSGSKAKPSRKASA
Ga0207693_109871322	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	GNDIVRPSDEDLPEAKKQPADLTEILRASVAAAKGGRGKSDDAKDDANDEDTKAKPKPRRKASA
Ga0207700_108866992	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VEGNDVVRPDGLDLPEDRKQPADLTEILRASVAAAKGGGRGKSDDKESADKDRDDAKPAAKPKPRRRASA
Ga0207700_115864062	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VVQAKVEGNDVVRPDGLDVPQDRKQPADLTEILRASVAAAKGGRGKSDDKESDDAKPAAKPKPRRRASA
Ga0207664_101184011	3300025929	Agricultural Soil	LEAVVQAKVEGNDVVRPDGLDVPADRKQPADLTEILRASVAAAKGGRGKSDDKDSADKDRDDAKPAAKPKPRRRASA
Ga0207664_102294663	3300025929	Agricultural Soil	VQAKIEGNDIVRPDGLDLPEAKKQPADLTEILRASVAAAKGGRGQSDQDEDGKDDKPGSKSGTKAKPRRRASA
Ga0207664_104066052	3300025929	Agricultural Soil	EGNDIVRPDGLDLPEAKKQPADLTEILRASVAAAKGGGRGKSGEDSADDEDGKPSSKSGSKAKPSRKASA
Ga0207664_109606911	3300025929	Agricultural Soil	DLPEAKKQPADLTEILRASVAAAKGGGRGKSDEDTEDTEDTKSSAKPKSRRKASA
Ga0207644_114821762	3300025931	Switchgrass Rhizosphere	DVVRPDGLDVPQDRKQPADLTEILRASVAAAKGGRGKSDDKDSAGKDRDDAKPAAKAKPRRKASA
Ga0207690_102857073	3300025932	Corn Rhizosphere	PDGLDLPEAKKQPADLTEILRASVAAAKGGGRGKSDDGTDEDAEDTKSSAKPKSRRRASA
Ga0207665_101858043	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	LDLPEAKKQPADLTEILRASVAAAKGGGRGKSDDGTDEDAEDTKSSAKPKSRRRASA
Ga0207702_100615035	3300026078	Corn Rhizosphere	DLTEILRASVAAAKGGGRGKSDDGTDEDAEDTKSSAKPKSRRRASA
Ga0209073_101076092	3300027765	Agricultural Soil	DGLDLPEAKKQPADLTEILRASVAAAKGGRGKSDEDENGKDEKPGSKSGTKAKPRRRASA
Ga0307290_102092531	3300028791	Soil	PEAKKQPADLTEILRASVAAAKGGGRGKSDDGTDEDTEDTKDTKASAKPKSRRQASA
Ga0307312_104578852	3300028828	Soil	AVVQAKIEGNDVVRPDGLDLPEAKKQPADLTEILRASVAAAKGGGRGKSDEDTEDTKSSAKPKSRRKASA
Ga0318516_101033023	3300031543	Soil	VAGNDIVRPSGLDLPDAKKQPADLTEILRASVAAVKGGRGKPDGAEDDDQEDATAKSNTKAKTRRKASA
Ga0310915_104202302	3300031573	Soil	DAKKQPADLTEILRASVAAAKGGRGKSDEDEASGAKAGSKAKPRRKASA
Ga0307474_105279841	3300031718	Hardwood Forest Soil	LDLPEAKKQPADLTEILRASVAAAKGGGRGKSDDATDEDTGDTKSSAKPKSRRKASA
Ga0306917_106295451	3300031719	Soil	VQAKIEGNDIVRPSGADLPDAKKQPADLTEILRASVAAAKGGRGKSDEDEASGAKAGSKAKPRRKASA
Ga0318501_101361931	3300031736	Soil	NDIVRPSGADLPDAKKQPADLTEILRASVAAAKGGRGQPDEAGPDDKAAAKPKTRRRASA
Ga0318492_104929282	3300031748	Soil	AVVQAKIEGNDIVRPSGADLPDAKKQPADLTEILRASVAAAKGGRGQPDEAGPDDKAAAKPKTRRRASA
Ga0318535_103593031	3300031764	Soil	ALEAVVEAKVAGNDIVRPSGLDLPDAKKQPADLTEILRASVAAVKGGRGKPDGAEDDDQEDATAKSNTKAKTRRKASA
Ga0318521_101570501	3300031770	Soil	VRPDGVDLPDAKKQPADLTEILRASVAAAKGGRGKSDEDDTSSSGSKAKPRRKASA
Ga0318521_107911332	3300031770	Soil	EGNDIVRPSGADLPDAKKQPADLTEILRASVAAAKGGRGQPDEAGPDDKAAAKPKTRRRASA
Ga0318508_10956742	3300031780	Soil	VDLPDAKKQPADLTEILRASVAAAKGGRGKSDEDDTSRSGSKAKPRRKASA
Ga0318567_107850621	3300031821	Soil	VQAKIEGNDIVRPSGLDLPEAKKQPADLTEILRASVAAAKGGRGKSEAEDDGKDEAKPKTRRRASA
Ga0318567_108937212	3300031821	Soil	FLASGLDLPDAKKQPADLTEILRASVAAAKGGRGKSDEDEASGAKAGSKAKPRRKASA
Ga0308175_1028775151	3300031938	Soil	KVEGNDVVRPDGLDLPEDRKQPADLTEILRASVAAAKGGGRGKSDDKEKEKDDAPAGAKAKPRRKASA
Ga0308174_110751542	3300031939	Soil	PEAKKQPADLTEILRASVAAAKGGGRGKSDDATDEDAEDTKSSAKPKSRRKASA
Ga0310913_108249292	3300031945	Soil	EAKVAGNDIVRPSGLDLPDAKKQPADLTEILRASVAAVKGGRGKPDGAEDDDQEDATAKSNTKAKTRRKASA
Ga0310909_111275231	3300031947	Soil	ADLTEILRASVAAVKGGRGKPDGAEDDDQEDATAKSNTKAKTRRKASA
Ga0306926_102483181	3300031954	Soil	AGNDIVRPSGLDLPDAKKQPADLTEILRASVAAVKGGRGKPDGAEDDDQEDATAKSNTKAKTRRKASA
Ga0308176_129755362	3300031996	Soil	PDGLDLPEAKKQPADLTEILRASVAAAKGGGRGKSDEDTEDTKSSAKPKSRRKASA
Ga0318549_102005182	3300032041	Soil	IVRPSGLDLPDAKKQPADLTEILRASVAAAKGGRGKSDEDEASGAKAGSKAKPRRKASA
Ga0318556_103164482	3300032043	Soil	VVQAKIEGNDIVRPSGLDLPDAKKQPADLTEILRASVAAAKGGRGKSDEDEASGAKAGSKAKPRRKASA
Ga0318533_111672462	3300032059	Soil	KQPADLTEILRASVAAAKGGRGQPDEAGPDDKAAAKPKTRRRASA
Ga0318505_102332502	3300032060	Soil	NDIVRPSGLDLPDAKKQPADLTEILRASVAAVKGGRGKPDGAEDDDQEDATAKSNPKAKTRRKASA
Ga0318504_104932562	3300032063	Soil	KQPADLTEILRASVAAVKGGRGKPDGAEDDDQEDATAKSNTKAKTRRKASA
Ga0318514_104057361	3300032066	Soil	GNDIVRPSGADLPDAKKQPADLTEILRASVAAAKGGRGQPDEAGPDDKAAAKPKTRRRAS
Ga0306924_123146951	3300032076	Soil	DLPDAKKQPADLTEILRASVAAAKGGRGQPDEAGPDDKDDKAAAKPKTRRRASA
Ga0318525_104827662	3300032089	Soil	QAKIEGNDIVRPSGADLPDAKKQPADLTEILRASVAAAKGGRGQPDEAGPDDKAAAKPKTRRRASA
Ga0335085_102427681	3300032770	Soil	ARKQPADLTEILRASVAAAKGGRGKSDDAEDEGKEDAKPKTRRQASA
Ga0335085_107201461	3300032770	Soil	DLTEILRASVAAAKGGGRGKPGEDTEDAKSGAKPKSRRKASA
Ga0335085_112500191	3300032770	Soil	EAKKQPADLTEILRASVAAAKGGGGRGKSDEDTKDTKDSAKPKSRRKASA
Ga0335085_119653982	3300032770	Soil	IVRPSGLDLPDAKKQPADLTEILRASVAAAKGGRGKSDEDEGSGATAGGKAKPRRKASA
Ga0335080_103150901	3300032828	Soil	EGNDIVRPSGLDLPEAKKQPADLTEILRASVAAAKGGRGTPDDAEDEDKADAKPKSRRRASA
Ga0335072_107713681	3300032898	Soil	LPEAKKQPADLTEILRASVAAAKGGRGKSAAEDDGKDGKAGKDGKDGKDEAKPKTRRRAS
Ga0335084_104079641	3300033004	Soil	PADLTEILRASVAAAKGGGRGKPGEDTEDAKSGAKPKSRRKASA
Ga0335077_122189102	3300033158	Soil	LPDARKQPADLTEILRASVAAAKGGRDQADEDDKPGKAKPRRKASA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060403

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences