Metagenome Family F060738

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060738
Family Type	Metagenome
Number of Sequences	132
Average Sequence Length	57 residues
Representative Sequence	YSNTSAKKELPAFEITADGFLATFLAADIEDLKKECRKRAPADLEAVIANATP
Number of Associated Samples	109
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.76 %
% of genes near scaffold ends (potentially truncated)	94.70 %
% of genes from short scaffolds (< 2000 bps)	87.88 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.697 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (21.212 % of family members)
Environment Ontology (ENVO)	Unclassified (46.970 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.576 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.80% β-sheet: 0.00% Coil/Unstructured: 64.20%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF06224	HTH_42	18.94
PF01713	Smr	8.33
PF00072	Response_reg	6.06
PF00199	Catalase	4.55
PF00486	Trans_reg_C	3.79
PF13361	UvrD_C	3.79
PF02567	PhzC-PhzF	3.03
PF02163	Peptidase_M50	3.03
PF12680	SnoaL_2	2.27
PF02738	MoCoBD_1	2.27
PF00106	adh_short	1.52
PF14305	ATPgrasp_TupA	1.52
PF00144	Beta-lactamase	1.52
PF01904	DUF72	1.52
PF00069	Pkinase	1.52
PF01380	SIS	1.52
PF13561	adh_short_C2	0.76
PF00775	Dioxygenase_C	0.76
PF00491	Arginase	0.76
PF13435	Cytochrome_C554	0.76
PF16576	HlyD_D23	0.76
PF02633	Creatininase	0.76
PF13288	DXPR_C	0.76
PF03404	Mo-co_dimer	0.76
PF12706	Lactamase_B_2	0.76
PF01554	MatE	0.76
PF02749	QRPTase_N	0.76
PF07521	RMMBL	0.76
PF07676	PD40	0.76
PF02518	HATPase_c	0.76
PF02012	BNR	0.76
PF12697	Abhydrolase_6	0.76
PF13618	Gluconate_2-dh3	0.76
PF00331	Glyco_hydro_10	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG3214	DNA glycosylase YcaQ, repair of DNA interstrand crosslinks	Replication, recombination and repair [L]	18.94
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	6.06
COG0753	Catalase	Inorganic ion transport and metabolism [P]	4.55
COG0384	Predicted epimerase YddE/YHI9, PhzF superfamily	General function prediction only [R]	3.03
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.52
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.52
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	1.52
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.52
COG3485	Protocatechuate 3,4-dioxygenase beta subunit	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.76
COG3693	Endo-1,4-beta-xylanase, GH35 family	Carbohydrate transport and metabolism [G]	0.76
COG0010	Arginase/agmatinase family enzyme	Amino acid transport and metabolism [E]	0.76
COG0157	Nicotinate-nucleotide pyrophosphorylase	Coenzyme transport and metabolism [H]	0.76
COG1402	Creatinine amidohydrolase/Fe(II)-dependent FAPy formamide hydrolase (riboflavin and F420 biosynthesis)	Coenzyme transport and metabolism [H]	0.76
COG1488	Nicotinic acid phosphoribosyltransferase	Coenzyme transport and metabolism [H]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.70 %
Unclassified	root	N/A	5.30 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.70 %
Unclassified	root	N/A	5.30 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.70 %
Unclassified	root	N/A	5.30 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	47.73 %
Unclassified	root	N/A	5.30 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.52 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.52 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.76 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	47.73 %
Unclassified	root	N/A	5.30 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.52 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.52 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.76 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	28.03 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	12.88 %
Unclassified	root	N/A	5.30 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	1.52 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.52 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.76 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	27.27 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	12.88 %
Unclassified	root	N/A	5.30 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.52 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.52 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.76 %
Gemmatimonadetes bacterium 13_1_40CM_3_65_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_3_65_8	0.76 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	27.27 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	6.82 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	6.06 %
Unclassified	root	N/A	5.30 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.52 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.76 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.76 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.76 %
Gemmatimonadetes bacterium 13_1_40CM_3_65_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_3_65_8	0.76 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	27.27 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	6.82 %
unclassified Gemmatimonadaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae	5.30 %
Unclassified	root	N/A	5.30 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.52 %
unclassified Acidobacterium	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium	0.76 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	0.76 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.76 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.76 %
Gemmatimonadetes bacterium 13_1_40CM_3_65_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_3_65_8	0.76 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	27.27 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	6.82 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	5.30 %
Unclassified	root	N/A	5.30 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.52 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	0.76 %
Gemmatimonas groenlandica	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas groenlandica	0.76 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.76 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.76 %
Gemmatimonadetes bacterium 13_1_40CM_3_65_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_3_65_8	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_104210934	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	559	Open in IMG/M
3300000953\|JGI11615J12901_10417206	Not Available	1619	Open in IMG/M
3300002560\|JGI25383J37093_10008416	All Organisms → cellular organisms → Bacteria → Proteobacteria	3350	Open in IMG/M
3300002908\|JGI25382J43887_10361816	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	614	Open in IMG/M
3300003993\|Ga0055468_10176015	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	648	Open in IMG/M
3300004463\|Ga0063356_101454534	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1012	Open in IMG/M
3300004780\|Ga0062378_10214614	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	541	Open in IMG/M
3300005166\|Ga0066674_10363881	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300005167\|Ga0066672_10989742	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300005171\|Ga0066677_10640635	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300005177\|Ga0066690_10713534	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	662	Open in IMG/M
3300005177\|Ga0066690_10987246	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	530	Open in IMG/M
3300005180\|Ga0066685_11124679	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300005186\|Ga0066676_10484417	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300005434\|Ga0070709_10148650	All Organisms → cellular organisms → Bacteria	1617	Open in IMG/M
3300005445\|Ga0070708_100956426	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	803	Open in IMG/M
3300005445\|Ga0070708_102262320	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	502	Open in IMG/M
3300005454\|Ga0066687_10264483	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	964	Open in IMG/M
3300005518\|Ga0070699_100098135	All Organisms → cellular organisms → Bacteria	2566	Open in IMG/M
3300005518\|Ga0070699_101466598	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300005536\|Ga0070697_100115137	All Organisms → cellular organisms → Bacteria	2244	Open in IMG/M
3300005536\|Ga0070697_101084814	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	712	Open in IMG/M
3300005546\|Ga0070696_101788869	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas groenlandica	531	Open in IMG/M
3300005552\|Ga0066701_10166384	All Organisms → cellular organisms → Bacteria	1336	Open in IMG/M
3300005553\|Ga0066695_10177198	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1333	Open in IMG/M
3300005561\|Ga0066699_10785904	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	672	Open in IMG/M
3300005569\|Ga0066705_10940853	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	512	Open in IMG/M
3300005586\|Ga0066691_10547373	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	690	Open in IMG/M
3300005586\|Ga0066691_10903048	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	520	Open in IMG/M
3300005587\|Ga0066654_10709122	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	564	Open in IMG/M
3300005598\|Ga0066706_10081519	All Organisms → cellular organisms → Bacteria	2297	Open in IMG/M
3300005886\|Ga0075286_1052947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	572	Open in IMG/M
3300006034\|Ga0066656_10975585	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	543	Open in IMG/M
3300006797\|Ga0066659_10982057	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	706	Open in IMG/M
3300006804\|Ga0079221_10541752	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	768	Open in IMG/M
3300006845\|Ga0075421_101944346	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	628	Open in IMG/M
3300006854\|Ga0075425_100538971	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300007076\|Ga0075435_102046706	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300007258\|Ga0099793_10251498	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300009089\|Ga0099828_10041454	All Organisms → cellular organisms → Bacteria	3775	Open in IMG/M
3300009090\|Ga0099827_11430921	Not Available	602	Open in IMG/M
3300009162\|Ga0075423_12492713	Not Available	564	Open in IMG/M
3300009822\|Ga0105066_1072824	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	738	Open in IMG/M
3300009840\|Ga0126313_10662256	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300010303\|Ga0134082_10398495	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300010303\|Ga0134082_10458364	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300010322\|Ga0134084_10002644	All Organisms → cellular organisms → Bacteria	3949	Open in IMG/M
3300010326\|Ga0134065_10361340	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300010329\|Ga0134111_10050258	All Organisms → cellular organisms → Bacteria	1512	Open in IMG/M
3300010333\|Ga0134080_10011214	All Organisms → cellular organisms → Bacteria	3194	Open in IMG/M
3300010333\|Ga0134080_10120328	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1095	Open in IMG/M
3300010333\|Ga0134080_10249210	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	783	Open in IMG/M
3300010333\|Ga0134080_10517242	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	569	Open in IMG/M
3300010335\|Ga0134063_10023027	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2593	Open in IMG/M
3300010335\|Ga0134063_10383506	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	687	Open in IMG/M
3300010335\|Ga0134063_10744210	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300010337\|Ga0134062_10001972	All Organisms → cellular organisms → Bacteria → Proteobacteria	7025	Open in IMG/M
3300010337\|Ga0134062_10088996	All Organisms → cellular organisms → Bacteria	1312	Open in IMG/M
3300010337\|Ga0134062_10504770	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	609	Open in IMG/M
3300010337\|Ga0134062_10603647	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300011119\|Ga0105246_11254714	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	685	Open in IMG/M
3300011270\|Ga0137391_10359095	All Organisms → cellular organisms → Bacteria	1250	Open in IMG/M
3300012096\|Ga0137389_10050299	All Organisms → cellular organisms → Bacteria	3145	Open in IMG/M
3300012096\|Ga0137389_10069146	All Organisms → cellular organisms → Bacteria	2725	Open in IMG/M
3300012179\|Ga0137334_1008509	All Organisms → cellular organisms → Bacteria	1885	Open in IMG/M
3300012198\|Ga0137364_10607225	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300012198\|Ga0137364_11239057	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300012203\|Ga0137399_10541446	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300012206\|Ga0137380_10398951	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1222	Open in IMG/M
3300012206\|Ga0137380_11355920	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	596	Open in IMG/M
3300012208\|Ga0137376_10565528	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300012211\|Ga0137377_10283826	All Organisms → cellular organisms → Bacteria	1588	Open in IMG/M
3300012349\|Ga0137387_10395994	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1001	Open in IMG/M
3300012350\|Ga0137372_10193087	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1635	Open in IMG/M
3300012355\|Ga0137369_10478979	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	883	Open in IMG/M
3300012360\|Ga0137375_10378058	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	1246	Open in IMG/M
3300012904\|Ga0157282_10424339	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	505	Open in IMG/M
3300012923\|Ga0137359_11232653	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_3_65_8	636	Open in IMG/M
3300012929\|Ga0137404_10566524	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1019	Open in IMG/M
3300012972\|Ga0134077_10187148	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	839	Open in IMG/M
3300012972\|Ga0134077_10383862	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300012975\|Ga0134110_10390239	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300012976\|Ga0134076_10150063	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300014154\|Ga0134075_10215347	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	827	Open in IMG/M
3300014301\|Ga0075323_1064135	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	739	Open in IMG/M
3300014311\|Ga0075322_1010063	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1815	Open in IMG/M
3300015052\|Ga0137411_1164086	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	648	Open in IMG/M
3300015356\|Ga0134073_10002476	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3714	Open in IMG/M
3300015356\|Ga0134073_10104046	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	843	Open in IMG/M
3300015357\|Ga0134072_10009920	All Organisms → cellular organisms → Bacteria	2185	Open in IMG/M
3300015357\|Ga0134072_10448765	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	519	Open in IMG/M
3300015359\|Ga0134085_10371282	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	639	Open in IMG/M
3300018028\|Ga0184608_10373226	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300018077\|Ga0184633_10063974	All Organisms → cellular organisms → Bacteria	1881	Open in IMG/M
3300018431\|Ga0066655_10107737	Not Available	1575	Open in IMG/M
3300018433\|Ga0066667_10993679	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	724	Open in IMG/M
3300018433\|Ga0066667_11022437	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	713	Open in IMG/M
3300018482\|Ga0066669_12379338	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	507	Open in IMG/M
3300019487\|Ga0187893_10821849	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	562	Open in IMG/M
3300020170\|Ga0179594_10400927	Not Available	521	Open in IMG/M
3300021073\|Ga0210378_10297478	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	607	Open in IMG/M
3300021090\|Ga0210377_10684034	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300025915\|Ga0207693_11070758	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300026088\|Ga0207641_11977169	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300026298\|Ga0209236_1159399	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300026301\|Ga0209238_1066161	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1276	Open in IMG/M
3300026313\|Ga0209761_1102112	All Organisms → cellular organisms → Bacteria	1431	Open in IMG/M
3300026317\|Ga0209154_1102178	All Organisms → cellular organisms → Bacteria	1221	Open in IMG/M
3300026322\|Ga0209687_1208198	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	603	Open in IMG/M
3300026322\|Ga0209687_1272145	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	530	Open in IMG/M
3300026328\|Ga0209802_1270877	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	570	Open in IMG/M
3300026335\|Ga0209804_1255418	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	645	Open in IMG/M
3300026524\|Ga0209690_1055831	All Organisms → cellular organisms → Bacteria	1744	Open in IMG/M
3300026530\|Ga0209807_1329275	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	519	Open in IMG/M
3300026536\|Ga0209058_1265674	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300026537\|Ga0209157_1083385	All Organisms → cellular organisms → Bacteria	1562	Open in IMG/M
3300027651\|Ga0209217_1166912	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	604	Open in IMG/M
3300027765\|Ga0209073_10197001	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	764	Open in IMG/M
3300027903\|Ga0209488_10549339	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300028381\|Ga0268264_11565470	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	670	Open in IMG/M
3300028536\|Ga0137415_11433348	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	514	Open in IMG/M
3300028597\|Ga0247820_10063701	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2175	Open in IMG/M
3300028799\|Ga0307284_10442398	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300028807\|Ga0307305_10204518	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	907	Open in IMG/M
3300028828\|Ga0307312_10348714	Not Available	968	Open in IMG/M
3300030606\|Ga0299906_10110932	All Organisms → cellular organisms → Bacteria	2180	Open in IMG/M
3300030620\|Ga0302046_11078978	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	636	Open in IMG/M
3300031820\|Ga0307473_10057975	All Organisms → cellular organisms → Bacteria	1875	Open in IMG/M
3300031820\|Ga0307473_10133703	All Organisms → cellular organisms → Bacteria	1383	Open in IMG/M
3300032180\|Ga0307471_103623544	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300033475\|Ga0310811_11103891	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	672	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.94%
Host-Associated	Host-Associated	6.06%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.64%
Plants	Host-Associated → Plants	6.06%
Aquatic	Environmental → Aquatic	5.30%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.79%
Freshwater	Environmental → Aquatic → Freshwater	2.27%
Sediment	Environmental → Aquatic → Sediment	2.27%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.27%
Marine	Environmental → Aquatic → Marine	0.76%
Cave	Environmental → Terrestrial → Cave	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.52%
Loam	Environmental → Terrestrial → Soil → Loam	8.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.27%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.27%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.27%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.52%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.76%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.76%
Sand	Environmental → Terrestrial → Soil → Sand	0.76%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.18%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	28.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.27%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.27%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.52%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.52%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.52%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.76%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.76%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.76%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	21.21%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	19.70%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.42%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.30%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.03%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.27%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.52%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.52%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.52%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.76%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.76%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.76%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.76%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.76%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.76%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.76%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004780	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005886	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009822	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012179	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT262_2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014301	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D1	Environmental	Open in IMG/M
3300014311	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D1	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028590	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1042109341	3300000364	Soil	AAKKELPAFEITSDCLLGTFLAEEIEDLKKECRRRAAEDLETIISNAGADSY*
JGI11615J12901_104172062	3300000953	Soil	DERAVIALYSNATTKKDLPAFEITRESLLGQFLTEDTEDLKKECRGRAPEELETVIRDATASHT*
JGI25383J37093_100084161	3300002560	Grasslands Soil	YSNTVAKKELPAFEITGNGVLGAFLAADIADLKKECRKRTPQDLEAVIENAAP*
JGI25382J43887_103618162	3300002908	Grasslands Soil	TAKKELPAFEITTECFLGKFLAADTADLKKECRQRAPQDLEAVIGNAPPP*
Ga0055468_101760151	3300003993	Natural And Restored Wetlands	NSVAKKELPAFEITMDGFLGNFLTADIEDLRRECRSRAPDDLRAVIGNATGEHG*
Ga0063356_1014545342	3300004463	Arabidopsis Thaliana Rhizosphere	AVVALYSNTAAKKELPAFEITSDCLLGTFLAEEIEDLKKECRRRAAEDLETIISNAGADSY*
Ga0062378_102146142	3300004780	Wetland Sediment	AKKELPALELVLDGFLGRFLDADIDDLRRECRLRAPEDLDQVIADAHGA*
Ga0066674_103638811	3300005166	Soil	TYSFYRFDQRAVIALYSNTSAKKELPAFEVTADSFLGTFLAADVADLKRECRKRAPDDLESVIRNAAP*
Ga0066672_109897421	3300005167	Soil	ALYSNTSAKKELPAFEVTAGSFLGTFLAADVKDLKQECRRRAPEDLESVIRNAAP*
Ga0066677_106406351	3300005171	Soil	FDQRAVIALYSNTSAKKELPAFEITADSFLGEFLAADMDDLKKECRKRAPQDLEAVIGNATP*
Ga0066690_107135342	3300005177	Soil	TSAKKELPAFEVTADSFLGTFLAADVKDLKQECRKRAPEDLESVIRNAAP*
Ga0066690_109872461	3300005177	Soil	YSNTAAKKELPAFEITSDCILAEFLAADIADLQKECRKRAPQDLETVIANAVPA*
Ga0066685_111246791	3300005180	Soil	AKKELPAFEITADSFLGEFLAADMDDLKKECRKRAPQDLEAVIGNATP*
Ga0066676_104844172	3300005186	Soil	KKELPAFEITADSFLGEFLAADMDDLKKECRKRAPQDLEAVIGNATP*
Ga0070709_101486501	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VIALYSNTIAKKELPALEVVTDGFLGRFLDADIDDLRRECRTRAPDDLDEVIAAAHES*
Ga0070708_1009564262	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	QGAVIALYSNTAAKKELPAFEITTDCILAEFLAADIEDLKKECRKRGPEDLETVIANAAPA*
Ga0070708_1022623202	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	IALYSNTSAKKELPAFEVAAGGVLGTFLAADMDDLKKECRKRASQDLEVVIANAAP*
Ga0066687_102644831	3300005454	Soil	RAVIALYSNTSAKKELPAFEITGAGLLAKFLAADMDDLETECRQRSPEDLEVVIANAAP*
Ga0070699_1000981354	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	ALYSNTSAKKELPAFEITGNGVLGTFLAADIEDLKKECRKRAPLDLETVIGNATP*
Ga0070699_1014665982	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	RAVIALYSNTVAKKELPAFEITGNGVLGAFLAADIADLKKECRKRAPQDLEAVIENAAT*
Ga0070697_1001151374	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	GAVIALYSNTAAKKELPAFEITTDCILAEFLAADIEDLKKECRKRGPEDLETVIANAAPA
Ga0070697_1010848141	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	ALYSNTAAKKELPAFEITTDCILAEFLAADIEDLKKECRKRAPQDLETVIANAAPA*
Ga0070696_1017888692	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	YSNTASKKELPAFEITSDCLLGTFLTEDIEDLKKECRRRAPEYLETVITLATAESA*
Ga0066701_101663841	3300005552	Soil	KELPAFEITADGLLGTFLAADVTDLKKECRKRAPLDLEAVIGNAAP*
Ga0066695_101771983	3300005553	Soil	KKELPAFEVTADSFLGTFLAADVKDLKQECRKRTPEDLESVIRNAAP*
Ga0066699_107859042	3300005561	Soil	KKELPAFEVTADSFLGTFLAADVKDLKQECRRRAPEDLESVIRTAAP*
Ga0066705_109408532	3300005569	Soil	AKKELPAFEVTAHGILGKFLAADMDDLRKECRKRATQDLEVVIANAAP*
Ga0066691_105473732	3300005586	Soil	AKKELPAFEITGDGVLGKFLAADVDDLERECRQRAPEDLEIVIANAAP*
Ga0066691_109030481	3300005586	Soil	SNTSAKKELPAFEITGAGVLAKFLAADMDDLETECRKRSPEDLEVVIANAAP*
Ga0066654_107091221	3300005587	Soil	LPAFEITGAGVLAKFLAADMDDLETECRQRSPEDLEVVIANAAP*
Ga0066706_100815191	3300005598	Soil	TTAKKELPAFEVTAHGILGKFLAADMDDLRKECRKRALADLEIVIANAAP*
Ga0075286_10529471	3300005886	Rice Paddy Soil	NTASKKDLPALEIVTDSFLGKFLAADIEDLKRECRKRAPEELEAVIMDSTG*
Ga0066656_109755852	3300006034	Soil	LYSNTAAKKELPAFEITSDCILAEFLAADIEDLKKECRKRAPQDLETVIANAVPA*
Ga0066659_109820571	3300006797	Soil	KKELPAFEITGDGVLGKFLAADMDDLETECRKRSPEDLEVVIANAAP*
Ga0079221_105417522	3300006804	Agricultural Soil	NTAAKKELPAFEITTDCILAEFLAADIEDLKKECRKRAPQDLETVIANAAPA*
Ga0075421_1019443462	3300006845	Populus Rhizosphere	KKELPAFEITSDCLLGTFLAEEIEDLKKECRRRAPEDLETIISNAGADSY*
Ga0075425_1005389711	3300006854	Populus Rhizosphere	SFYKFDQGAVIALYSNTAAKKELPAFEITTDCILAEFLAADIEDLKKECRKRAPQDLETVIANAAPA*
Ga0075435_1020467061	3300007076	Populus Rhizosphere	FYTFDERAVIALYSNATAKKDLPAFEITRDSLLGQFLSEDTGDLKKECRRRAPEDLEAVIRDASAAHA*
Ga0099793_102514982	3300007258	Vadose Zone Soil	MALYSNSSAKKELPAFEITADGILGTFLAADMEDLKKECRKRVPLDLEAVIANAAP*
Ga0099828_100414545	3300009089	Vadose Zone Soil	AKKELPAFEITGNGVLGAFLAADIADLKKECRKRAPQDLEAVIENSAP*
Ga0099827_114309212	3300009090	Vadose Zone Soil	SFYQFDQQAVIALYSNTSAKKELPAFEITADSFLGKFLAADVEDLKKECRKRAPLDLEAVIGNATP*
Ga0075423_124927132	3300009162	Populus Rhizosphere	WAVIALYSNATAKKDLPAFEITRDSLLGQFLSEDTGDLKKECRRRAPEDLEAVIRDASAAHA*
Ga0105066_10728242	3300009822	Groundwater Sand	RAVIALYSNTATKKDLPAFEVTTDGFLGRFLATDIDDLKRECRRRAPEDLETVIRKAAAT
Ga0126313_106622562	3300009840	Serpentine Soil	PTFSFYRFDDRAVLAFYSNTAAKKDLPAFEVTAGSTMGRFLDADIEDLKQECRKRSPDDLEAVIDNALH*
Ga0134082_103984952	3300010303	Grasslands Soil	YSFYRFDQRAVIALYSNTSAKKELPAFEVTADSFLGTFLAADVADLKRECRKRAPDDLESVIRNAAP*
Ga0134082_104583642	3300010303	Grasslands Soil	VIALYSNTSAKKELPAFELTTDGFLGKFLAADMDDLRKECRKRAPQDLEVVIANAAP*
Ga0134084_100026445	3300010322	Grasslands Soil	YSNTSAKKELPAFELTTDGFLGKFLAADMDDLRKECRKRAPQDLEVVIANAAP*
Ga0134065_103613401	3300010326	Grasslands Soil	RAVIALYSNTSAKKELPAFEVTADSFLGTFLAADVADLKRECRKRAPDDLESVIRNAAS*
Ga0134111_100502582	3300010329	Grasslands Soil	FYRFDDRAVIALYSNSSAKKELPAFEITTDCFLGKFLAADIEDLKKECRQRAPGDLEAVIVNAPPPQGHH*
Ga0134080_100112144	3300010333	Grasslands Soil	VIALYSNTSAKKELPAFEVTADSFLGTFLAADVADLKRECRKRAPDDLESVIRNAAP*
Ga0134080_101203281	3300010333	Grasslands Soil	VIALYSNTSAKKELPAFEITADSFLGEFLAADMDDLKKECRKRAPQDLEAVIGNATP*
Ga0134080_102492101	3300010333	Grasslands Soil	KKELPAFEITSDCMLAEFLAADIEDLKKECRKRAPQDLETVIANAVPA*
Ga0134080_105172421	3300010333	Grasslands Soil	NTAAKKELPAFEITSDCMLAEFLAADIEDLKKECRKRASQDLETVIANAAPA*
Ga0134063_100230274	3300010335	Grasslands Soil	SFYRFDQRAVIALYSNTSAKKELPAFEVTADSFLGRFLAADVADLKRECRKRAPDDLESVIRNAAP*
Ga0134063_103835062	3300010335	Grasslands Soil	YRFDERAVIALYSNTTAKKELPAFEVTAHGILGKFLAADMDDLRKECRKRATQDLEVVIANAVP*
Ga0134063_107442102	3300010335	Grasslands Soil	FYRFDQRAVIALYSNTSAKKELPAFEVTADSFLGTFLAADVADLKRECRKRAPDDLESVIRNAAP*
Ga0134062_1000197210	3300010337	Grasslands Soil	VIALYSNTSAKKELPAFEVTADSFLGRFLAADVADLKRECRKRAPDDLESVIRNAAP*
Ga0134062_100889961	3300010337	Grasslands Soil	YRFDARAVIALYSNTSAKKELPAFEVTADSFLGTFLAADVKDLKQECRKRAPGDLEAVIRNAAP*
Ga0134062_105047701	3300010337	Grasslands Soil	YSFYRFDDRALIALYSNTSAKKELPAFEITGAGVLAKFLAADMDDLETECRQRSPEDLEVVIANAAP*
Ga0134062_106036472	3300010337	Grasslands Soil	YSNTSAKKELPAFEITADGFLATFLAADIEDLKKECRKRAPADLEAVIANATP*
Ga0105246_112547142	3300011119	Miscanthus Rhizosphere	YSFYKFDARAVVALYSNTAAKKELPAFEITSDCLLGTFLAEEIEDLKKECRRRAPEDLETIISNAGADSY*
Ga0137391_103590952	3300011270	Vadose Zone Soil	ALYSNTVAKKELPAFEITGNGVLGAFLAADIADLKKECRKRTPQDLEAVIENAAP*
Ga0137389_100502991	3300012096	Vadose Zone Soil	TYSFYQFDQRAVIALYSNTVAKKELPAFEITGNGVLGAFLAADIADLKKECRKRTPQDLEAVIENAAP*
Ga0137389_100691464	3300012096	Vadose Zone Soil	TYSFYQFDQRAVIALYSNTVAKKELPAFEITGNGVLGAFLVADIADLKKECRKRAPQDLEAVIENSAP*
Ga0137334_10085091	3300012179	Soil	AVIALYSNTASKKDLPAFEITNDGFLGEFLAADTEDLKRECRKRAPEDLEAVITHAKETH
Ga0137364_106072251	3300012198	Vadose Zone Soil	KKELPAFEITADGFLATFLAADIEDLKKECRKRAPADLEAVIANATP*
Ga0137364_112390572	3300012198	Vadose Zone Soil	YSFYRFDERAVMALYSNSSAKKELPAFEITADGILGTFLAADVADLKKECRKRGPLDLEAVIANATP*
Ga0137399_105414463	3300012203	Vadose Zone Soil	SAKKELPAFEVTADGLLGKFLAADMEDLKKECRKRAPEGLEAVIGKAKP*
Ga0137380_103989511	3300012206	Vadose Zone Soil	RAVIALYSNTSAKKELPAFEITTDCFLGRFLAADTEDLKKECRKRAPQDLEAVIRNAPP*
Ga0137380_113559201	3300012206	Vadose Zone Soil	KKELPAFEITTDCFLGRFLAADTEDLKKECRKRASRDLEAVIRNATP*
Ga0137376_105655281	3300012208	Vadose Zone Soil	KELPAFEITGTGVLGAFLAADIEDLKKECRKRPSQDLEGVIENATP*
Ga0137377_102838263	3300012211	Vadose Zone Soil	DDRAVIALYSNTTAKKELPAFEITRAGVLAKFLAADMDDLETECRKRSPEDLEVVIANAAP*
Ga0137387_103959942	3300012349	Vadose Zone Soil	YPACSFYRFVERAVIALYYNTTAKRDLPAFEVTAHGILGKFLAADMDDLRKECRKRAPQDLEVVIANANP*
Ga0137372_101930871	3300012350	Vadose Zone Soil	AKKELPAFEVTAHGILGKFLAADMDDLRKECRKRAPPDLEIVIANAVP*
Ga0137369_104789792	3300012355	Vadose Zone Soil	AKKELPAFEVTSNSVLGKFLAGDIEDLKKECRKRASQDLEAVIEHAAP*
Ga0137375_103780583	3300012360	Vadose Zone Soil	DERAVLALYSNTATKKDLPAFEISADSMLSRFLATETEDLKKECRRRAPEDLEAVIRNAGEQA*
Ga0157282_104243391	3300012904	Soil	TKKELPAFEVTVEGILGSFLAADIEDLRRECRVRNPDDLEAVITNAGGHS*
Ga0137359_112326532	3300012923	Vadose Zone Soil	KKELPAFEITTDSILGKFLAADMEDLKKECRKRAPLDLETVIGNATP*
Ga0137404_105665241	3300012929	Vadose Zone Soil	QFDQRAVIAMYSNTAAKKELPAFEISGNGVLGAFLAADIADLKKECRKRAPQDLEGVIENAAP*
Ga0134077_101871482	3300012972	Grasslands Soil	AKKELPAFEITGNGVLGAFLAADIADLKKECRKRAPQDLEAVIENAAP*
Ga0134077_103838622	3300012972	Grasslands Soil	VIALYSNTAAKKELPAFEITSDCMLAEFLAADIEDLKKECRKRASQDLETVIANAAPA*
Ga0134110_103902391	3300012975	Grasslands Soil	SAKKELPAFEITAGGFLATFLAADIEDLKKECRKRAPADLEAVIANATP*
Ga0134076_101500633	3300012976	Grasslands Soil	AKKELPAFEITSDCILAEFLAADIEDLKKECRKRAPQDLETVIANAVPA*
Ga0134075_102153471	3300014154	Grasslands Soil	NTAAKKELPAFEITSDCILAEFLAADIEDLKKECRKRAPQDLETVIANAVPA*
Ga0075323_10641352	3300014301	Natural And Restored Wetlands	FYRFDDRAIMAMYSNSVAKKELPAFEVTVEGFLGSFLAADIEDLRRECRVRSPDDLEAVITDAGGHA*
Ga0075322_10100633	3300014311	Natural And Restored Wetlands	AKKELPAFEVTVEGFLGSFLAADIEDLRRECRVRSPDDLEAVITDAGGHA*
Ga0137411_11640861	3300015052	Vadose Zone Soil	MALYSNTSAKKELPAFEITTDSILGKFLAADMEDLKKECRKRAPLDLETVIGNATP*
Ga0134073_100024763	3300015356	Grasslands Soil	KELPAFEVTAHGILGKFLAADMDDLRKECRKRATQDLEVVIANAVP*
Ga0134073_101040461	3300015356	Grasslands Soil	RAVMALYSNSSAKKELPAFEITADGLLGTFLAADVKDLKQECRRRAPEDLESVIRNAAP*
Ga0134072_100099202	3300015357	Grasslands Soil	FYRFDERAVIALYSNTTAKKELPAFEVTAHGILGKFLAADMDDLRKECRKRATQDLEVVIANAVP*
Ga0134072_104487651	3300015357	Grasslands Soil	DDGAVLALYSNTAAKKELPAFEITSDCMLAEFLAADIEDLKKECRKRASQDLETVIANAVPA*
Ga0134085_103712822	3300015359	Grasslands Soil	LYSNTSAKKELPAFEVTADSFLGTFLAADVADLKRECRKRAPDDLESVIRNAAP*
Ga0184608_103732261	3300018028	Groundwater Sediment	PTFSFYRFDDRAILALCSNTAAKKDLPAFEVTTDSALGRFIDADVEDLKQECRQRTPDDLEIVIDNALHG
Ga0184633_100639741	3300018077	Groundwater Sediment	ALYSNTAAKKDMPAFEIESESFLGNFLATDIEDLKGECRKRAPADIEKVIRDSAEHAI
Ga0066655_101077372	3300018431	Grasslands Soil	AKKELPAFEVTAHGILGKFLAADMDDLRKECRKRATQDLEVVIANAVP
Ga0066667_109936792	3300018433	Grasslands Soil	AKKELPAFEITASGVLGKFLAADMDDLETECRQRSPEDLEVVIANAAP
Ga0066667_110224371	3300018433	Grasslands Soil	LYSNTTAKKELPAFEVTAHGILGKFLAADMDDLRKECRKRATQDLEVVIANAAP
Ga0066669_123793382	3300018482	Grasslands Soil	RAVIALYSNTSAKKELPAFEVTADSFLGTFLAADVKDLKQECRRRAPEDLESVIRNAAP
Ga0187893_108218492	3300019487	Microbial Mat On Rocks	FDERAVMAMYSNSVAKKELPAFEITTEGYLGSFLAADIADLKRECRGRAPDDLEAVIGHATGEHR
Ga0179594_104009271	3300020170	Vadose Zone Soil	ELPAFEITGNGVLGAFLAADIADLKKECRKRAPQDLEGVIENAAP
Ga0210378_102974782	3300021073	Groundwater Sediment	LPAFEITMEGLLGSFLSADIDDLRRECRSRAPDDLNAVIGNATGAHG
Ga0210377_106840342	3300021090	Groundwater Sediment	ATVWLFGRYPTFSFYSFDERAVMALYSNTAAKKDMPALEIETASFLGNFLAADIEDLKGECRKRAPADLEKVIREAAEDTT
Ga0207693_110707583	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	YKFDDRAILALYSNTASKKDLPAFEITSECLLGTFLVEDIEDLRKECRRRAPEDLEAVITQATADSV
Ga0207641_119771692	3300026088	Switchgrass Rhizosphere	RFDDRAILALYSNTAAKKDLPAFEVTMDSALGRFVDADIEDLKQECRQHSPDDLEIVIDNALHG
Ga0209236_11593992	3300026298	Grasslands Soil	ERAVMALYSNSSAKKELPAFEITADGLLGTFLAADVTDLKKECRKRAPLDLEAVIGNATP
Ga0209238_10661612	3300026301	Grasslands Soil	VIALYSNTSAKKELPAFEVTADSFLGTFLAADVKDLKQECRRRAPEDLESVIRNAAP
Ga0209761_11021121	3300026313	Grasslands Soil	KFDDGAVIAMYSNTAAKKELPAFEITSDCILAEFLAADIEDLKKECRKRAPQDLETVIANAVPA
Ga0209154_11021783	3300026317	Soil	TAAKKELPAFEITSDCILAEFLAADIADLQKECRKRAPQDLETVIANAVPA
Ga0209687_12081982	3300026322	Soil	LPAFEVTAHGILGKFLAADMDDLRKECRKRATQDLEVVIANAAP
Ga0209687_12721452	3300026322	Soil	TYSFYRFDDRAVIALYSNTSAKKELPAFEITGAGLLAKFLAADMDDLETECRQRSPEDLEVVIANAAP
Ga0209802_12708771	3300026328	Soil	TYSFYKFADGAVIALYSNTAAKKELPAFEITSDCILAEFLAADIADLQKECRKRAPQDLETVIANAVPA
Ga0209804_12554182	3300026335	Soil	YSFYKFADGAVIALYSNTAAKKELPAFEITSDCILAEFLAADIADLQKECRKRAPQDLETVIANAVPA
Ga0209690_10558311	3300026524	Soil	SSAKKELPAFEITAGGILGTFLAADVADLKKECRKRAPLELEAVIGNATP
Ga0209807_13292751	3300026530	Soil	AKKELPAFEVTAHGILGKFLAADMDDLRKECRKRATQDLEVVIANAAP
Ga0209058_12656741	3300026536	Soil	FDQRAVIALYSNTSAKKELPAFEVTADSFLGRFLAADVADLKRECRKRAPDDLESVIRNAAP
Ga0209157_10833851	3300026537	Soil	IALYSNTSAKKELPAFEVTADGLLGKFLAADMEDLKKECRKRAPEGLEAVIGKAKP
Ga0209217_11669121	3300027651	Forest Soil	YSNTAAKKELPAFEVSTDGALGKFLATDIEDLKKECRRRAPGEMEALIASATVP
Ga0209073_101970011	3300027765	Agricultural Soil	PAFEVTPHGVLGKFLAADIDDLRKECRKRAPEDLELVIANAAP
Ga0209488_105493391	3300027903	Vadose Zone Soil	IALYSSTAAKKELPALEVTTDGYFGRFLAADIEDLRRECRRRAPEDLETVIANATAHHG
Ga0268264_115654702	3300028381	Switchgrass Rhizosphere	ALYSNTAAKKELPAFEITSDCLLGTFLAEEIEDLKKECRRRAPEDLETIISNAGADSY
Ga0137415_114333481	3300028536	Vadose Zone Soil	YSNTAAKKELPAFEVTTDGALGKFLATDIEDLRKECRRRAPGELEALIANATAP
Ga0247823_112910021	3300028590	Soil	SFYRFDDRAILALYSNTAAKKDLPAFEVTTDASMGRFLDSDIEDLKHECRQRTPDDLETVIDNALHG
Ga0247820_100637011	3300028597	Soil	FYRFDDRAIMAMYSNSVAKKELPAFEVTVEGILGSFLAADIEDLRRECRVRNPDDLEAVITNAGGHA
Ga0307284_104423981	3300028799	Soil	YPTFSFYRFDDRAILALYSNTAAKKDLPAFEVTTDSALARFLDTDIEDLKQECRQHTPDDLEIVIDNALHG
Ga0307305_102045181	3300028807	Soil	LYSNTATKKELPAFELSADSMLSRFLATETEDLRKECRRRAPEDLEAVISSATEPG
Ga0307312_103487141	3300028828	Soil	FSFYRFDDRAILALYSNTAAKKDLPAFEVTTDSALARFLDTDIEDLKQECRQHTPDDLEIVIDNALHG
Ga0299906_101109323	3300030606	Soil	NTAAKKDLPAFEIRTDGLLGRFLEADIEDLRKECRRRAPQDLENVIGEASTPIG
Ga0302046_110789781	3300030620	Soil	AFEVTIQGLLGSFLSADIEDLKRECRRRAPDDLDAVIGNATGEHR
Ga0307473_100579754	3300031820	Hardwood Forest Soil	SNTAAKKELPAFEITTDCILAEFLAADIEDLKKECRKRAPQDLETVIANAAPA
Ga0307473_101337033	3300031820	Hardwood Forest Soil	AKKELPAFEITGNGVLGAFLAADIADLKKECRKRAPQDLEAVIENAAT
Ga0307471_1036235442	3300032180	Hardwood Forest Soil	SFYKFDKGAVIALYSNTAAKKELPAFEITTECILAEFLAADIEDLKKECRKRGPEDLETVIANAAPA
Ga0310811_111038912	3300033475	Soil	AVVALYSNTAAKKELPAFEITSDCLLGTFLAEEIEDLKKECRRRAAEDLETIISNAGADS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F060738

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences