Metagenome / Metatranscriptome Family F060964

Basic Information
Family ID	F060964
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	42 residues
Representative Sequence	PFRITYAWLDGRDSIVLNEIRTNVPVDETKFGRPAPLKPR
Number of Associated Samples	119
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.52 %
% of genes near scaffold ends (potentially truncated)	97.73 %
% of genes from short scaffolds (< 2000 bps)	89.39 %
Associated GOLD sequencing projects	114
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Most Common Taxonomy
Group	Bacteria (60.606 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (11.364 % of family members)
Environment Ontology (ENVO)	Unclassified (19.697 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.485 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 5.88% β-sheet: 0.00% Coil/Unstructured: 94.12%
Feature Viewer

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Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF13620	CarboxypepD_reg	2.27
PF08450	SGL	2.27
PF02661	Fic	1.52
PF07519	Tannase	1.52
PF12796	Ank_2	0.76
PF08240	ADH_N	0.76
PF05635	23S_rRNA_IVP	0.76
PF07631	PSD4	0.76
PF13360	PQQ_2	0.76
PF00589	Phage_integrase	0.76
PF00005	ABC_tran	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	2.27
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	2.27

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.61 %
Unclassified	root	N/A	39.39 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.61 %
Unclassified	root	N/A	39.39 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.61 %
Unclassified	root	N/A	39.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.39 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	26.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	25.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.39 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	15.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	13.64 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.52 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.39 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.91 %
Cellvibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	1.52 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.52 %
Gammaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis	0.76 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.39 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.91 %
Spongiibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Spongiibacteraceae	1.52 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.52 %
Pseudohongiella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Pseudohongiella	0.76 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.39 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.91 %
Spongiibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Spongiibacteraceae	1.52 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.52 %
Pseudohongiella spirulinae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Pseudohongiella → Pseudohongiella spirulinae	0.76 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004140\|Ga0058894_1471061	Not Available	675	Open in IMG/M
3300005093\|Ga0062594_102150018	Not Available	602	Open in IMG/M
3300005180\|Ga0066685_10936080	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300005329\|Ga0070683_101078564	All Organisms → cellular organisms → Bacteria → Proteobacteria	771	Open in IMG/M
3300005436\|Ga0070713_101805965	All Organisms → cellular organisms → Bacteria → Acidobacteria	593	Open in IMG/M
3300005450\|Ga0066682_10640991	All Organisms → cellular organisms → Bacteria → Acidobacteria	661	Open in IMG/M
3300005468\|Ga0070707_100050571	All Organisms → cellular organisms → Bacteria → Proteobacteria	3984	Open in IMG/M
3300005541\|Ga0070733_10365513	Not Available	958	Open in IMG/M
3300005544\|Ga0070686_100547416	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	905	Open in IMG/M
3300005555\|Ga0066692_10831856	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300005558\|Ga0066698_10734936	All Organisms → cellular organisms → Bacteria → Acidobacteria	647	Open in IMG/M
3300005591\|Ga0070761_10702641	Not Available	633	Open in IMG/M
3300005617\|Ga0068859_101710070	All Organisms → cellular organisms → Bacteria → Proteobacteria	695	Open in IMG/M
3300005764\|Ga0066903_107386969	Not Available	568	Open in IMG/M
3300006034\|Ga0066656_10586050	Not Available	722	Open in IMG/M
3300006049\|Ga0075417_10084870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1419	Open in IMG/M
3300006049\|Ga0075417_10094986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1346	Open in IMG/M
3300006050\|Ga0075028_100068606	All Organisms → cellular organisms → Bacteria → Proteobacteria	1747	Open in IMG/M
3300006050\|Ga0075028_100182465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1125	Open in IMG/M
3300006050\|Ga0075028_100471672	Not Available	729	Open in IMG/M
3300006354\|Ga0075021_10168583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1329	Open in IMG/M
3300006354\|Ga0075021_10466600	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797	Open in IMG/M
3300006791\|Ga0066653_10262757	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	878	Open in IMG/M
3300006796\|Ga0066665_10842012	All Organisms → cellular organisms → Bacteria → Acidobacteria	718	Open in IMG/M
3300006871\|Ga0075434_100648331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1074	Open in IMG/M
3300009012\|Ga0066710_102844632	Not Available	682	Open in IMG/M
3300009094\|Ga0111539_11161628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	897	Open in IMG/M
3300009137\|Ga0066709_103460537	Not Available	573	Open in IMG/M
3300009162\|Ga0075423_10199532	All Organisms → cellular organisms → Bacteria	2099	Open in IMG/M
3300009176\|Ga0105242_11618097	Not Available	682	Open in IMG/M
3300009691\|Ga0114944_1019161	All Organisms → cellular organisms → Bacteria → Proteobacteria	2350	Open in IMG/M
3300009792\|Ga0126374_11818562	Not Available	510	Open in IMG/M
3300009809\|Ga0105089_1064346	Not Available	594	Open in IMG/M
3300010043\|Ga0126380_10148458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Spongiibacteraceae	1497	Open in IMG/M
3300010047\|Ga0126382_11775975	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300010048\|Ga0126373_10090470	All Organisms → cellular organisms → Bacteria → Proteobacteria	2810	Open in IMG/M
3300010120\|Ga0127451_1020839	Not Available	533	Open in IMG/M
3300010141\|Ga0127499_1028042	Not Available	555	Open in IMG/M
3300010304\|Ga0134088_10116813	All Organisms → cellular organisms → Bacteria → Proteobacteria	1261	Open in IMG/M
3300010329\|Ga0134111_10416703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300010333\|Ga0134080_10642492	Not Available	521	Open in IMG/M
3300010358\|Ga0126370_10901641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	798	Open in IMG/M
3300010358\|Ga0126370_11038653	Not Available	751	Open in IMG/M
3300010359\|Ga0126376_11206866	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300010366\|Ga0126379_12396322	All Organisms → cellular organisms → Bacteria → Acidobacteria	627	Open in IMG/M
3300010366\|Ga0126379_13447503	Not Available	530	Open in IMG/M
3300010379\|Ga0136449_102157776	Not Available	815	Open in IMG/M
3300010400\|Ga0134122_13029490	Not Available	524	Open in IMG/M
3300010401\|Ga0134121_11092757	Not Available	790	Open in IMG/M
3300010860\|Ga0126351_1176271	Not Available	508	Open in IMG/M
3300011120\|Ga0150983_12580980	Not Available	767	Open in IMG/M
3300011120\|Ga0150983_15442134	All Organisms → cellular organisms → Bacteria → Acidobacteria	1914	Open in IMG/M
3300011120\|Ga0150983_16337827	Not Available	613	Open in IMG/M
3300011270\|Ga0137391_10342532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Spongiibacteraceae	1285	Open in IMG/M
3300011423\|Ga0137436_1001302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6801	Open in IMG/M
3300011429\|Ga0137455_1002543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5085	Open in IMG/M
3300012199\|Ga0137383_10121556	All Organisms → cellular organisms → Bacteria → Proteobacteria	1905	Open in IMG/M
3300012202\|Ga0137363_10939414	Not Available	734	Open in IMG/M
3300012205\|Ga0137362_11232825	Not Available	633	Open in IMG/M
3300012211\|Ga0137377_11183753	Not Available	694	Open in IMG/M
3300012231\|Ga0137465_1204071	Not Available	593	Open in IMG/M
3300012356\|Ga0137371_10567174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	873	Open in IMG/M
3300012361\|Ga0137360_10948947	All Organisms → cellular organisms → Bacteria → Acidobacteria	742	Open in IMG/M
3300012362\|Ga0137361_10334636	All Organisms → cellular organisms → Bacteria → Acidobacteria	1388	Open in IMG/M
3300012379\|Ga0134058_1164116	Not Available	611	Open in IMG/M
3300012469\|Ga0150984_104420585	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300012923\|Ga0137359_10694727	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300012944\|Ga0137410_11113365	Not Available	677	Open in IMG/M
3300012948\|Ga0126375_11208492	Not Available	629	Open in IMG/M
3300012971\|Ga0126369_10612092	All Organisms → cellular organisms → Bacteria → Proteobacteria	1160	Open in IMG/M
3300013297\|Ga0157378_10366722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1411	Open in IMG/M
3300014154\|Ga0134075_10517188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300014657\|Ga0181522_10211994	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300014866\|Ga0180090_1004400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2015	Open in IMG/M
3300015054\|Ga0137420_1023078	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300015054\|Ga0137420_1251647	All Organisms → cellular organisms → Bacteria → Proteobacteria	2624	Open in IMG/M
3300015358\|Ga0134089_10182010	Not Available	840	Open in IMG/M
3300015359\|Ga0134085_10095170	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1232	Open in IMG/M
3300015359\|Ga0134085_10327532	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300015371\|Ga0132258_10981342	All Organisms → cellular organisms → Bacteria → Proteobacteria	2134	Open in IMG/M
3300015373\|Ga0132257_103315021	Not Available	586	Open in IMG/M
3300015374\|Ga0132255_101778193	Not Available	936	Open in IMG/M
3300016357\|Ga0182032_11191914	All Organisms → cellular organisms → Bacteria → Acidobacteria	655	Open in IMG/M
3300016371\|Ga0182034_11753350	Not Available	547	Open in IMG/M
3300017657\|Ga0134074_1366418	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300017934\|Ga0187803_10172155	All Organisms → cellular organisms → Bacteria → Acidobacteria	852	Open in IMG/M
3300018033\|Ga0187867_10187629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Pseudohongiella → Pseudohongiella spirulinae	1179	Open in IMG/M
3300018482\|Ga0066669_11676587	Not Available	583	Open in IMG/M
3300019228\|Ga0180119_1293734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	885	Open in IMG/M
3300019377\|Ga0190264_11693145	Not Available	562	Open in IMG/M
3300021046\|Ga0215015_11096793	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300021151\|Ga0179584_1270055	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300021171\|Ga0210405_11019093	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300021362\|Ga0213882_10422977	Not Available	565	Open in IMG/M
3300021388\|Ga0213875_10009795	All Organisms → cellular organisms → Bacteria	4834	Open in IMG/M
3300021432\|Ga0210384_10131589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2245	Open in IMG/M
3300021477\|Ga0210398_11174733	All Organisms → cellular organisms → Bacteria → Acidobacteria	607	Open in IMG/M
3300021559\|Ga0210409_11210584	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300021858\|Ga0213852_1217499	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300022509\|Ga0242649_1025891	Not Available	729	Open in IMG/M
3300022529\|Ga0242668_1147320	Not Available	515	Open in IMG/M
3300022724\|Ga0242665_10237061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300022726\|Ga0242654_10058049	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300024330\|Ga0137417_1057831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	715	Open in IMG/M
3300024347\|Ga0179591_1038708	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3494	Open in IMG/M
3300025920\|Ga0207649_10761507	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300025922\|Ga0207646_10034133	All Organisms → cellular organisms → Bacteria → Proteobacteria	4598	Open in IMG/M
3300026332\|Ga0209803_1054941	All Organisms → cellular organisms → Bacteria	1744	Open in IMG/M
3300026376\|Ga0257167_1013606	Not Available	1114	Open in IMG/M
3300026540\|Ga0209376_1328964	All Organisms → cellular organisms → Bacteria → Acidobacteria	585	Open in IMG/M
3300026548\|Ga0209161_10528259	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300027680\|Ga0207826_1028137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1559	Open in IMG/M
3300027873\|Ga0209814_10087221	All Organisms → cellular organisms → Bacteria → Proteobacteria	1318	Open in IMG/M
3300027873\|Ga0209814_10461252	Not Available	561	Open in IMG/M
3300028906\|Ga0308309_10907192	Not Available	765	Open in IMG/M
3300031114\|Ga0308187_10245607	Not Available	648	Open in IMG/M
3300031114\|Ga0308187_10318462	Not Available	589	Open in IMG/M
3300031231\|Ga0170824_127315350	Not Available	579	Open in IMG/M
3300031538\|Ga0310888_10532988	Not Available	706	Open in IMG/M
3300031708\|Ga0310686_105180660	All Organisms → cellular organisms → Bacteria → Acidobacteria	1383	Open in IMG/M
3300031716\|Ga0310813_12262103	Not Available	515	Open in IMG/M
3300031718\|Ga0307474_11626655	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300031720\|Ga0307469_10210098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1528	Open in IMG/M
3300031747\|Ga0318502_10050551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2187	Open in IMG/M
3300031823\|Ga0307478_11057550	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300031823\|Ga0307478_11544724	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300031879\|Ga0306919_11212269	Not Available	573	Open in IMG/M
3300031913\|Ga0310891_10053429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1138	Open in IMG/M
3300031947\|Ga0310909_10723907	Not Available	826	Open in IMG/M
3300032261\|Ga0306920_104272900	Not Available	514	Open in IMG/M
3300033812\|Ga0364926_114754	Not Available	563	Open in IMG/M
3300033814\|Ga0364930_0191677	Not Available	696	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.88%
Host-Associated	Host-Associated	12.12%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.52%
Plants	Host-Associated → Plants	12.12%
Aquatic	Environmental → Aquatic	11.36%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.24%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.33%
Sediment	Environmental → Aquatic → Sediment	6.82%
Freshwater	Environmental → Aquatic → Freshwater	3.79%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.03%
Floodplain	Environmental → Terrestrial → Floodplain	1.52%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.76%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.76%
Roots	Host-Associated → Plants → Roots	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.64%
Loam	Environmental → Terrestrial → Soil → Loam	9.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.82%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.27%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.52%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.52%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.52%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.76%
Sand	Environmental → Terrestrial → Soil → Sand	0.76%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.76%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.76%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.36%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.15%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.06%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.27%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.52%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.52%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.52%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.52%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.76%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.76%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.76%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.33%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	8.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.58%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.55%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.79%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.03%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.03%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.27%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.27%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.27%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.52%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.52%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.76%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.76%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.76%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.76%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.76%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	0.76%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.76%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.76%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.76%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.76%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.76%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.76%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.76%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.76%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004140	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF224 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009691	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009809	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010120	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010141	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010860	Boreal forest soil eukaryotic communities from Alaska, USA - C5-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011423	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2	Environmental	Open in IMG/M
3300011429	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012231	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT828_2	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012379	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014866	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT890_16_10D	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019228	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT790_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021151	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021858	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022509	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026376	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-B	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033812	Sediment microbial communities from East River floodplain, Colorado, United States - 65_j17	Environmental	Open in IMG/M
3300033814	Sediment microbial communities from East River floodplain, Colorado, United States - 55_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0058894_14710611	3300004140	Forest Soil	LKLPFRITYAWLDGRDSIVLTDIKTNVPVDEAKFGRPAPLKPR*
Ga0062594_1021500182	3300005093	Soil	NGIKLPFRMTYAWLDGRDAIVLDEIRTNVPVDEAKFGRPAPLK*
Ga0066685_109360802	3300005180	Soil	QKTCPKKDAFPFRITYAWLDGRDSIMLKEIKTNVPVDEAKFGRPAPLNPR*
Ga0070683_1010785641	3300005329	Corn Rhizosphere	PFRITYAWLDGRDSIALREIKTNVPVDQAKFGKPAPLKPQ*
Ga0070713_1018059652	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	YRDVNGIKIPYRLTFAWLDGRDSIEIKDVQVNVPIPDAKFGTPEQAKGQ*
Ga0066682_106409912	3300005450	Soil	QKTCPKKDAFPFRITYAWLDGRDSIMLKEIKTNVPVDEAKFGRPPPLNPR*
Ga0070707_1000505711	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	IKLPFRITYAWLDGRDAIVLNEIRTNVPVDDTKFGRPAPLKPQ*
Ga0070733_103655131	3300005541	Surface Soil	KLPFRITYAWLDGRDSIVLNEIKTNVPVNEAKFGRPAPLNPK*
Ga0070686_1005474161	3300005544	Switchgrass Rhizosphere	DVNGIKLPFRMTYAWLDGRDAIVLDEIRTNVPVDEAKFGRPAPLK*
Ga0066692_108318562	3300005555	Soil	FRITYAWLDGRDSIVLNEIKTNVPASEAKFGRPAPLKTR*
Ga0066698_107349362	3300005558	Soil	VNGIKLPFRITYAWLDGRDSIVLNEIQTNIAIDEAKFGRPAPLKPR*
Ga0070761_107026412	3300005591	Soil	GMKFPFRIAYVWLDGRDSILLDEVKTNVPIEEAKFGRPAPLKK*
Ga0068859_1017100701	3300005617	Switchgrass Rhizosphere	AWLDGRDSIVLNEVQTNVPVDETKFGRPTPLAAR*
Ga0066903_1073869691	3300005764	Tropical Forest Soil	FRITYAWLDGRDAILLREITTNVPVDEAKFGRPAPLKR*
Ga0066656_105860501	3300006034	Soil	PFRITFAWLDGRDSIVLNEIRTNVAIDEAKFGKPAPLKPR*
Ga0075417_100848701	3300006049	Populus Rhizosphere	PFRITYAWLDGRDSIVLNEIKTNVPVEEAKFGKPAPLKPR*
Ga0075417_100949861	3300006049	Populus Rhizosphere	VGGIKLPFRITYAWLDGRDSIVLNEIQTNVPVDETKFGRPAPLKPR*
Ga0075028_1000686064	3300006050	Watersheds	YAWLGGRDSIVLREITPNAAIDEAKFGKPAPLKPR*
Ga0075028_1001824653	3300006050	Watersheds	PFHITYAWLDGRDSIVLSEIKTNVAVDEAKFGKPAPLKKP*
Ga0075028_1004716722	3300006050	Watersheds	NGIKLPFRITYAWLDGRDSIVLNDIKTNVAIDETKFGKPAPLKK*
Ga0075021_101685831	3300006354	Watersheds	FHITYAWLGGRDSIVLREITLNAAIDEAKFGKPAPLKPR*
Ga0075021_104666001	3300006354	Watersheds	PHHLTFAWLDGRDSISLNDVKINVAVDETKFGKPAPLQR*
Ga0066653_102627573	3300006791	Soil	FPFRITYAWLDGRDSIMLKEIKTNVPVDEAKFGRPAPLNPR*
Ga0066665_108420122	3300006796	Soil	RVIRVIRGQKTCPKKDAFTFRITYAWLDGRDSIMLKEIKTNVPVDEAKFGRPAPLNPR*
Ga0075434_1006483311	3300006871	Populus Rhizosphere	YAWLDGRDSIVLSEIRTNVPIDEAKFGKPAPLKR*
Ga0066710_1028446322	3300009012	Grasslands Soil	FPFRITFAWLDGRDSIVLNEIRTNVAIDEAKFGKPAPLKPR
Ga0111539_111616281	3300009094	Populus Rhizosphere	DVNGIKLPFRMTYAWLDGRDAIVLDEIRTNVPVDETKFGRPAPLK*
Ga0066709_1034605372	3300009137	Grasslands Soil	ITFAWLDGRDSIVLIDIKTNVPVDEAKFGKPAPLNPR*
Ga0075423_101995324	3300009162	Populus Rhizosphere	FRITYAWLDGRDAIVLNDVRTNVPVDDAKFGRPAPLTPR*
Ga0105242_116180972	3300009176	Miscanthus Rhizosphere	NGIKLPFRITYAWLDGRDAIVLDDVRTNVAVDEGKFGRPAPLKPQ*
Ga0114944_10191614	3300009691	Thermal Springs	NGIKLPFRITFAWLDGRDSIVLNTIATNIAIDQSKFGRPAPLKPR*
Ga0126374_118185621	3300009792	Tropical Forest Soil	AWLDGRDSIVLSEIKTNVPIDEAKFGRPAPLKPR*
Ga0105089_10643461	3300009809	Groundwater Sand	FRITFAWLDGRDSIVLNTITTNVPIDQTKFGRPAPLKSR*
Ga0126380_101484583	3300010043	Tropical Forest Soil	YRDVNGIKLPFHITYAWLNRRDSIVLNEIKTNVPVDEAKFSKPAPLKPR*
Ga0126382_117759752	3300010047	Tropical Forest Soil	KIPFRWTFAWLAGRDSIELKEVQTNVPIDEAKFGRPALMKGR*
Ga0126373_100904704	3300010048	Tropical Forest Soil	TYAWLDGRDSIVLSEIKTNVPADEAKFGKPAPLKPR*
Ga0127451_10208391	3300010120	Grasslands Soil	TFAWLDGRDSIVLNEVRTNLPVDEAKFGRPAPLKK*
Ga0127499_10280421	3300010141	Grasslands Soil	DYRDIGGIRLPFRITYAWLNGRDSIVLNEIKTNVAVDEAKFGRPAPLKPR*
Ga0134088_101168133	3300010304	Grasslands Soil	KFPFRITFAWLDGRDSIVLNEIRTNVAIDEAKFGKPAPLKPR*
Ga0134111_104167031	3300010329	Grasslands Soil	KLPFRITYAWLDGRDSIVLNEIQTNIAIDEAKFGRPAPLKPR*
Ga0134080_106424921	3300010333	Grasslands Soil	TFAWLDGRDSIVLNEIRTNVAIDEAKFGRPAPLKK*
Ga0126370_109016413	3300010358	Tropical Forest Soil	YAWLDGRDSIVLNEIRTNVTIDETKFGRPAPVKR*
Ga0126370_110386532	3300010358	Tropical Forest Soil	TYAWLDGRDSIVLSEIKTNTPVDETKFGRPAPVKPR*
Ga0126376_112068661	3300010359	Tropical Forest Soil	KIAFRCTFAWLDGRDSIELKEVQTNVPIDDARFGRPAQVKGR*
Ga0126379_123963221	3300010366	Tropical Forest Soil	DYRDVNGIKLPFRITYAWLDGRDSILLKEITTNVPVDEAKFGRPAPLKR*
Ga0126379_134475031	3300010366	Tropical Forest Soil	ITYAWLDGRDSIVLSEIKTNVSVDEAKFGKPGPLKR*
Ga0136449_1021577762	3300010379	Peatlands Soil	FAWLDGRDSIELKEVQTNVPIDEAKFGRPATMKGR*
Ga0134122_130294901	3300010400	Terrestrial Soil	LPFRITYAWLDGRDAIVLNEIQTNVPVDETKFGRPAPLR*
Ga0134121_110927573	3300010401	Terrestrial Soil	GIKLPFRITYAWLDGRDSIVLNDIKTNVPIDDAKFGRPAPMKK*
Ga0126351_11762711	3300010860	Boreal Forest Soil	RITYAWLDGRDAIELREIKTNVPVDEAKFGKPAPLKPR*
Ga0150983_125809801	3300011120	Forest Soil	PFRITYAWLDGRDSIVLNDIKTNVAVDDAKFGKPAPMKK*
Ga0150983_154421344	3300011120	Forest Soil	ADYKDVNGIKLPFRITYAWLDGRDSIVLNEIKTNVPIDEAKFGRPAPLKK*
Ga0150983_163378271	3300011120	Forest Soil	NGIKLPFRITYAWLDGRDSIVLSEIKTNVAIDEAKFGRPAPLKR*
Ga0137391_103425323	3300011270	Vadose Zone Soil	LPSGYPWLDGHDSIVLNDIKINVPIDEAKFGRPAPMKPK*
Ga0137436_10013021	3300011423	Soil	IKLPFRITYAWLDGRDAIVLNEIQTNVPVDEAKFGRPAPLK*
Ga0137455_10025436	3300011429	Soil	YRDVNGIKLPFRITYAWLDGRDAIVLNEIQTNVPIDEAKFGRPAPLK*
Ga0137383_101215561	3300012199	Vadose Zone Soil	TYAWLDGRDSIVLNDIKTNVPVDETKFGKPAPLKPR*
Ga0137363_109394141	3300012202	Vadose Zone Soil	YAWLDGRDSIVLTEIKTNVPVDEAKFGKPAPLKPQ*
Ga0137362_112328251	3300012205	Vadose Zone Soil	YAWLDGRDSIVLNEIRTNVPVDETKFGRPAPLKAR*
Ga0137377_111837532	3300012211	Vadose Zone Soil	PFRITYAWLDGRDSIVLSEIKTNVPIDESTFGRPAPLKR*
Ga0137465_12040711	3300012231	Soil	GIKLPFRITYAWLDGRDAIVLNEIQTNVPIDEAKFGRPAPLK*
Ga0137371_105671743	3300012356	Vadose Zone Soil	DVSGIKLPFRITYAWLDGRDSIVLNDIKTNVPVDETKFGKPAPLKPR*
Ga0137360_109489472	3300012361	Vadose Zone Soil	IELPFRISYAWLDGRDPIILNDIKANVPVSEAKFGRPAPLKA*
Ga0137361_103346362	3300012362	Vadose Zone Soil	GIKLPFRITYAWLDGRDSIVLNEIKTNVPVDEAKFGRPAPLKR*
Ga0134058_11641162	3300012379	Grasslands Soil	ITFAWLDGRDSIVLNEIRTNVAIDEAKFGRPAPLKK*
Ga0150984_1044205852	3300012469	Avena Fatua Rhizosphere	AWLDGRDSIVLSEIKTNVPIDEAKFGRPAPLKAR*
Ga0137359_106947271	3300012923	Vadose Zone Soil	TYAWLDGRDSIVLTEIKTNVPVDEAKFGKPAPLKPR*
Ga0137410_111133651	3300012944	Vadose Zone Soil	PFRITYAWLDGRDSIVLNDIKTNVPIDEAKFARPAPMKKP*
Ga0126375_112084922	3300012948	Tropical Forest Soil	RITYAWLDGRDSIVLSEIRTNVPIDEAKFGKPAPLKR*
Ga0126369_106120921	3300012971	Tropical Forest Soil	PFRITYAWLDGRDSIVLNEIRTNVPVDETKFGRPAPLKPR*
Ga0157378_103667223	3300013297	Miscanthus Rhizosphere	YAWLDGRDSIVLNEIQTNVPVDEAKFGKPAPLKPRR*
Ga0134075_105171881	3300014154	Grasslands Soil	TYAWLDGRDTIMLSEIKTNVPVDESKFERPAPVKQR*
Ga0181522_102119942	3300014657	Bog	MPFRMTFAWLNGRDAIRLNEVRANVSIDPAVFGKPATRQTAGSK*
Ga0180090_10044001	3300014866	Soil	RITYAWLDGRDAIVLNEIQTNVPIDEAKFGRPAPLK*
Ga0137420_10230781	3300015054	Vadose Zone Soil	GIELPFRITYAWLDGRDPIILNDIKANVPVSEAKFGAKFGRPAPLKA*
Ga0137420_12516474	3300015054	Vadose Zone Soil	VALPNGIELPFRITYAWLDGRDPIILNDIKANVPVSEAKFGRPAPLKA*
Ga0134089_101820103	3300015358	Grasslands Soil	KFPFRITFAWLDGRDSIVLNEIRTNVAIDEAKFGRPAPLKK*
Ga0134085_100951701	3300015359	Grasslands Soil	CPKKDAFPFRITYAWLDGRDSIMLKEIKTNVPVDEAKFGRPAPLNPR*
Ga0134085_103275322	3300015359	Grasslands Soil	DFADYKDVNGIKLPFRITYAWLDGRDSIVLSEIKTNVPIDEAKFGRPAPVKK*
Ga0132258_109813424	3300015371	Arabidopsis Rhizosphere	LPFRMTFAWLDGRDAIVLDEIRTNVPVDEAKFGKPAPLK*
Ga0132257_1033150211	3300015373	Arabidopsis Rhizosphere	RITYAWLDGRDSILLTEITTNVPIDEGKFGKPAPLKR*
Ga0132255_1017781931	3300015374	Arabidopsis Rhizosphere	FRMTYAWLDGRDAIVLDEIRTNVPVDEAKFGRPALLQK*
Ga0182032_111919142	3300016357	Soil	VNGIKLPFRITYAWLDGRDSIVLSEIKTNVRADEAK
Ga0182034_117533502	3300016371	Soil	FHITYAWLDGRDSIVLNDIKTNVPVDDSKFAKPAPLKK
Ga0134074_13664181	3300017657	Grasslands Soil	PFRITYAWLDGRDSIMLSEVTTNVPVDEAKFGRPAPLKPR
Ga0187803_101721551	3300017934	Freshwater Sediment	VNGIKLPFRITYAWLDVRDSIVLTEIKTNVAVDDAKFGKP
Ga0187867_101876291	3300018033	Peatland	VNGIKLPFHITYAWLDGRDSIMLSEIKTNVAIDEAKFGRPAPLKR
Ga0066669_116765871	3300018482	Grasslands Soil	GLKLPFRITYAWLDGRDAIVLNEIRTNVPVDDVKFGRPAPLKPQ
Ga0180119_12937341	3300019228	Groundwater Sediment	RITYAWLDGRDAIVLNEIQTNVPIDEAKFGRPAPLK
Ga0190264_116931452	3300019377	Soil	FRITYAWLDGRDSIVLNDVQTNVPVDETKFGRPAPLKPR
Ga0215015_110967932	3300021046	Soil	FRITYAWLDGRDSIVLNEIKTNVPISEAKFGRPAPLNVR
Ga0179584_12700551	3300021151	Vadose Zone Soil	IELPFRITYAWLDGRDPIVLNDIKANVPVSEAKFGRPAPLKA
Ga0210405_110190932	3300021171	Soil	TYAWLDGRDSIVLNDIKTNVQVSEAKFDRPAPLKAR
Ga0213882_104229772	3300021362	Exposed Rock	GIKLPFRILYAWLDGRDSIVLSEIKTNVAVDEAKFGRPAPLKPR
Ga0213875_100097951	3300021388	Plant Roots	PLPSAFTYAWLDGRDSIVLNEIETNVPIEEAKFGKPAPLKAR
Ga0210384_101315894	3300021432	Soil	GIQFPFHITYAWLDGRDSIVLSEVKTNVPIDEAKFGRPAPLKK
Ga0210398_111747333	3300021477	Soil	PFHIAYVWLDGRDSIVLDDVKTNVPIDEAKFGRPAPLKKK
Ga0210409_112105841	3300021559	Soil	PSRITYAWLDGRDSIVLSEIKTNVPVSEEKFGRPAPLKAR
Ga0213852_12174992	3300021858	Watersheds	NGIKLPFRITYAWLDGRDSIVLNDIKTNVAIDESKFGKPAPLKK
Ga0242649_10258911	3300022509	Soil	RDVNGIKLPFRISYVWLDGRDSILLSNIKTNVAIDETKFGRPAPLKK
Ga0242668_11473201	3300022529	Soil	LPFHIAYVWLDGRDSIELNEIRTNVPIDEAKFGRPAPMKKK
Ga0242665_102370611	3300022724	Soil	SRITYAWLDGRDSIVLSEIKTNVPVSEEKFGRPAPLKSR
Ga0242654_100580493	3300022726	Soil	YANYRDVNGLKLPFRITYAWLDGRDSIVLTDIKTNVPIDEAKFGRPAPLKPR
Ga0137417_10578312	3300024330	Vadose Zone Soil	FRISYAWLDGRDPIILNDIKANVPVSEAKFGRPAPLKA
Ga0179591_10387084	3300024347	Vadose Zone Soil	MPFRITFAWLNGRDAIRLTEVKTNIAIDPALFGKPKPLPKPAISGE
Ga0207649_107615071	3300025920	Corn Rhizosphere	GIKLPFRMTYAWLDGRDAIVLDEIRTNVPVDEAKFGRPAPLK
Ga0207646_100341331	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	IKLPFRITYAWLDGRDAIVLNEIRTNVPVDDTKFGRPAPLKPQ
Ga0209803_10549413	3300026332	Soil	KFPFRITFAWLDGRDSIVLNEIRTNVAIDEAKFGKPAPLKPR
Ga0257167_10136061	3300026376	Soil	RHVALPNGIELPFRISYAWLDGRDPIILNDIKANVPVSEAKFGRPAPLKA
Ga0209376_13289642	3300026540	Soil	QKTCPKKDAFPFRITYAWLDGRDSIMLKEIKTNVPVDEAKFGRPAPLNPR
Ga0209161_105282592	3300026548	Soil	KFPFRITYAWLDGRDTIMLSEIKTNVPVDEAKFGRPAPLKPR
Ga0207826_10281373	3300027680	Tropical Forest Soil	FKLPFRITYAWLDGRDSIVLNDIKTNVAIDETKFGKPAPLKK
Ga0209814_100872211	3300027873	Populus Rhizosphere	TYAWLDGRDSIVLNEIQTNVPVDETKFGRPAPLKPR
Ga0209814_104612522	3300027873	Populus Rhizosphere	RITYAWLDGRDSIVLNEIKTNVPVEEAKFGKPAPLKPR
Ga0308309_109071921	3300028906	Soil	ITYAWLDGRDSIVLNEIKTNVPVSEAKFGRPAPLKAR
Ga0308187_102456071	3300031114	Soil	IKLAFRITYAWLDGRDSIVLNEIQTNVPVDEAKFGKPAPLKPRR
Ga0308187_103184622	3300031114	Soil	YAWLDGRDAIVLNEIQTNVPVDEAKFGRPAPLRPQ
Ga0170824_1273153501	3300031231	Forest Soil	LKLPFRITYAWLDGRDAIELREIKTNVAVDEAKFGKPAPLKPR
Ga0310888_105329883	3300031538	Soil	FRITFAWLDGRDSIVLNNITANVAIAAAKFGRPAPLKPSR
Ga0310686_1051806601	3300031708	Soil	VNGMKFPFRIAYVWLDGRDSIILDDVKTNVPIDEAKFGRPAPLKK
Ga0310813_122621031	3300031716	Soil	FRITYAWLDGRDAIELREIKTNVPVDEAKFGKPAPLKPR
Ga0307474_116266552	3300031718	Hardwood Forest Soil	LPSRITYAWLDGRDSIVLSEIKTNVPVGEEKFGRPAPLKAR
Ga0307469_102100981	3300031720	Hardwood Forest Soil	KLPFRITYAWLDGRDAIVLDQVQTNVPVDEAKFGRPAPLKTQ
Ga0318502_100505511	3300031747	Soil	IKLPFRITYAWLDGRDSIELTDIKTNVPIDEAKFGRPAPLKPR
Ga0307478_110575502	3300031823	Hardwood Forest Soil	YRDVNGIKLPFRITYAWLDGRDSIVLNEIKTNVPVSEAKFGRPAPLKAR
Ga0307478_115447242	3300031823	Hardwood Forest Soil	YRDVNGIKMPYRLTFAWLDGRDSIEIKDVQVNVPIPEAKFGTPEQVKGQ
Ga0306919_112122691	3300031879	Soil	LPFRITYAWLDGRDSIELTDIKTNVPIDEAKFGRPAPLKPR
Ga0310891_100534291	3300031913	Soil	FPFRITFAWLDGRDSIVLNNITANVAIAAAKFGRPAPLKPSR
Ga0310909_107239073	3300031947	Soil	DVNGIKLPFHLTYAWLDGRDSIVLNDIKTNVPIDESKFGKPAPLKK
Ga0306920_1042729002	3300032261	Soil	YKDVNGIKLPFRITYAWLDGRDSIVLNEIKTNVPVDEAKFGRPAPVKK
Ga0364926_114754_2_154	3300033812	Sediment	DYRDVNGIKLPFRITFAWLDGRDSIILNDITTNVPIDQAKFGRPAPLKPR
Ga0364930_0191677_2_145	3300033814	Sediment	DVNGIKLPFRITFAWLDGRDSIILNDITTNVPIDQAKFGRPAPLKPR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060964

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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