Metagenome Family F061023

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061023
Family Type	Metagenome
Number of Sequences	132
Average Sequence Length	76 residues
Representative Sequence	VPEEGFFRAGRTRPGPNVHGPRTGPPPGGSRPGGGSSRRPRWDTDAGITDRDVAALRWLGQQYAARSDVLRVLLGRLSPGS
Number of Associated Samples	85
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	96.15 %
% of genes near scaffold ends (potentially truncated)	94.70 %
% of genes from short scaffolds (< 2000 bps)	91.67 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (68.182 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (37.121 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (37.121 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.69% β-sheet: 0.00% Coil/Unstructured: 74.31%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF12728	HTH_17	59.85
PF00293	NUDIX	2.27
PF02441	Flavoprotein	2.27
PF13424	TPR_12	1.52
PF00528	BPD_transp_1	1.52
PF00589	Phage_integrase	0.76
PF13586	DDE_Tnp_1_2	0.76
PF03320	FBPase_glpX	0.76
PF01381	HTH_3	0.76
PF03861	ANTAR	0.76
PF13560	HTH_31	0.76
PF08447	PAS_3	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG1494	Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase or related protein	Carbohydrate transport and metabolism [G]	0.76
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.18 %
All Organisms	root	All Organisms	31.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.18 %
cellular organisms	root	All Organisms → cellular organisms	31.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.18 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.18 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	14.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.18 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	14.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.18 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9.85 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.18 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.76 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.76 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.76 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.76 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.18 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.76 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.76 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.76 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	0.76 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.18 %
Acidithrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidithrix	0.76 %
unclassified Geodermatophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae	0.76 %
Cryobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Cryobacterium	0.76 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.76 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.18 %
Geodermatophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	0.76 %
unclassified Acidithrix	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidithrix → unclassified Acidithrix	0.76 %
unclassified Cryobacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Cryobacterium → unclassified Cryobacterium	0.76 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.76 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.18 %
Cryobacterium sp. Y57	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Cryobacterium → unclassified Cryobacterium → Cryobacterium sp. Y57	0.76 %
Acidithrix sp. C25	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidithrix → unclassified Acidithrix → Acidithrix sp. C25	0.76 %
Geodermatophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	0.76 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.76 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459014\|G1P06HT02I7843	Not Available	574	Open in IMG/M
3300000550\|F24TB_10523922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	702	Open in IMG/M
3300000956\|JGI10216J12902_107402397	Not Available	551	Open in IMG/M
3300001431\|F14TB_100155014	Not Available	818	Open in IMG/M
3300001431\|F14TB_101088128	Not Available	530	Open in IMG/M
3300003373\|JGI25407J50210_10039627	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300003373\|JGI25407J50210_10044424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1135	Open in IMG/M
3300004463\|Ga0063356_106243622	Not Available	511	Open in IMG/M
3300004479\|Ga0062595_102592341	Not Available	508	Open in IMG/M
3300005172\|Ga0066683_10451295	Not Available	788	Open in IMG/M
3300005562\|Ga0058697_10189955	Not Available	923	Open in IMG/M
3300005562\|Ga0058697_10620941	Not Available	567	Open in IMG/M
3300005981\|Ga0081538_10231664	Not Available	721	Open in IMG/M
3300005981\|Ga0081538_10317897	Not Available	568	Open in IMG/M
3300005981\|Ga0081538_10321209	Not Available	564	Open in IMG/M
3300006196\|Ga0075422_10526021	Not Available	539	Open in IMG/M
3300006904\|Ga0075424_100902167	Not Available	943	Open in IMG/M
3300006969\|Ga0075419_10929320	Not Available	629	Open in IMG/M
3300006969\|Ga0075419_11268415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	546	Open in IMG/M
3300009094\|Ga0111539_12374473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidithrix → unclassified Acidithrix → Acidithrix sp. C25	615	Open in IMG/M
3300009100\|Ga0075418_10754506	Not Available	1050	Open in IMG/M
3300009100\|Ga0075418_11484252	Not Available	736	Open in IMG/M
3300009147\|Ga0114129_11125568	Not Available	982	Open in IMG/M
3300009147\|Ga0114129_11682365	Not Available	775	Open in IMG/M
3300009156\|Ga0111538_10884748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1131	Open in IMG/M
3300009156\|Ga0111538_11388745	Not Available	886	Open in IMG/M
3300009156\|Ga0111538_13322026	Not Available	559	Open in IMG/M
3300009162\|Ga0075423_11120650	Not Available	838	Open in IMG/M
3300009789\|Ga0126307_10116397	Not Available	2125	Open in IMG/M
3300009789\|Ga0126307_10354523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1181	Open in IMG/M
3300009789\|Ga0126307_10537515	Not Available	943	Open in IMG/M
3300009840\|Ga0126313_10030225	All Organisms → cellular organisms → Bacteria	3703	Open in IMG/M
3300009840\|Ga0126313_11027247	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300010029\|Ga0105074_1002075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2758	Open in IMG/M
3300010037\|Ga0126304_10293027	Not Available	1077	Open in IMG/M
3300010037\|Ga0126304_11158475	Not Available	529	Open in IMG/M
3300010037\|Ga0126304_11172245	Not Available	526	Open in IMG/M
3300010040\|Ga0126308_10146210	Not Available	1489	Open in IMG/M
3300010040\|Ga0126308_10747466	Not Available	675	Open in IMG/M
3300010041\|Ga0126312_10316071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Cryobacterium → unclassified Cryobacterium → Cryobacterium sp. Y57	1103	Open in IMG/M
3300010044\|Ga0126310_11046521	Not Available	646	Open in IMG/M
3300010999\|Ga0138505_100016508	Not Available	909	Open in IMG/M
3300012204\|Ga0137374_10560207	Not Available	877	Open in IMG/M
3300012204\|Ga0137374_10872040	Not Available	663	Open in IMG/M
3300012359\|Ga0137385_10696814	Not Available	848	Open in IMG/M
3300012360\|Ga0137375_10367308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1270	Open in IMG/M
3300012360\|Ga0137375_10638492	Not Available	880	Open in IMG/M
3300012532\|Ga0137373_10365288	Not Available	1129	Open in IMG/M
3300014487\|Ga0182000_10224160	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300014487\|Ga0182000_10409404	Not Available	604	Open in IMG/M
3300014487\|Ga0182000_10453082	Not Available	584	Open in IMG/M
3300014488\|Ga0182001_10693976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	506	Open in IMG/M
3300018028\|Ga0184608_10212726	Not Available	848	Open in IMG/M
3300018051\|Ga0184620_10033098	All Organisms → cellular organisms → Bacteria	1370	Open in IMG/M
3300018056\|Ga0184623_10526873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	501	Open in IMG/M
3300018066\|Ga0184617_1032575	Not Available	1244	Open in IMG/M
3300018066\|Ga0184617_1199449	Not Available	596	Open in IMG/M
3300018078\|Ga0184612_10372965	Not Available	721	Open in IMG/M
3300018081\|Ga0184625_10135943	Not Available	1282	Open in IMG/M
3300018466\|Ga0190268_10689680	Not Available	747	Open in IMG/M
3300019377\|Ga0190264_11982327	Not Available	533	Open in IMG/M
3300019767\|Ga0190267_10296554	Not Available	835	Open in IMG/M
3300019767\|Ga0190267_10565415	Not Available	693	Open in IMG/M
3300019767\|Ga0190267_10631495	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300021078\|Ga0210381_10097130	Not Available	952	Open in IMG/M
3300022694\|Ga0222623_10005116	All Organisms → cellular organisms → Bacteria	4617	Open in IMG/M
3300027056\|Ga0209879_1010030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1526	Open in IMG/M
3300027718\|Ga0209795_10022232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2213	Open in IMG/M
3300027880\|Ga0209481_10554102	Not Available	595	Open in IMG/M
3300027909\|Ga0209382_10160267	All Organisms → cellular organisms → Bacteria	2601	Open in IMG/M
3300028587\|Ga0247828_10309012	Not Available	876	Open in IMG/M
3300028589\|Ga0247818_10281523	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300028707\|Ga0307291_1065124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	888	Open in IMG/M
3300028708\|Ga0307295_10176119	Not Available	601	Open in IMG/M
3300028716\|Ga0307311_10238971	Not Available	538	Open in IMG/M
3300028719\|Ga0307301_10046946	All Organisms → cellular organisms → Bacteria	1323	Open in IMG/M
3300028720\|Ga0307317_10131203	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300028720\|Ga0307317_10202085	Not Available	670	Open in IMG/M
3300028721\|Ga0307315_10228799	Not Available	581	Open in IMG/M
3300028722\|Ga0307319_10116840	Not Available	858	Open in IMG/M
3300028722\|Ga0307319_10321620	Not Available	513	Open in IMG/M
3300028744\|Ga0307318_10122468	Not Available	886	Open in IMG/M
3300028744\|Ga0307318_10205317	Not Available	682	Open in IMG/M
3300028796\|Ga0307287_10070655	Not Available	1302	Open in IMG/M
3300028796\|Ga0307287_10256301	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300028807\|Ga0307305_10401532	Not Available	619	Open in IMG/M
3300028810\|Ga0307294_10180996	Not Available	719	Open in IMG/M
3300028811\|Ga0307292_10330810	Not Available	641	Open in IMG/M
3300028814\|Ga0307302_10193266	Not Available	992	Open in IMG/M
3300028814\|Ga0307302_10489806	Not Available	610	Open in IMG/M
3300028814\|Ga0307302_10564789	Not Available	565	Open in IMG/M
3300028814\|Ga0307302_10651523	Not Available	523	Open in IMG/M
3300028819\|Ga0307296_10690776	Not Available	558	Open in IMG/M
3300028876\|Ga0307286_10334557	Not Available	562	Open in IMG/M
3300028878\|Ga0307278_10383666	Not Available	618	Open in IMG/M
3300028880\|Ga0307300_10171392	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300028884\|Ga0307308_10399431	Not Available	659	Open in IMG/M
3300028884\|Ga0307308_10430021	Not Available	633	Open in IMG/M
3300030336\|Ga0247826_11149706	Not Available	621	Open in IMG/M
3300030510\|Ga0268243_1071038	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300030514\|Ga0268253_10343172	Not Available	528	Open in IMG/M
3300031548\|Ga0307408_100473010	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300031731\|Ga0307405_11186433	Not Available	660	Open in IMG/M
3300031731\|Ga0307405_11302277	Not Available	632	Open in IMG/M
3300031731\|Ga0307405_12050858	Not Available	513	Open in IMG/M
3300031824\|Ga0307413_10049771	All Organisms → cellular organisms → Bacteria	2513	Open in IMG/M
3300031824\|Ga0307413_10137590	All Organisms → cellular organisms → Bacteria	1682	Open in IMG/M
3300031824\|Ga0307413_10953325	Not Available	732	Open in IMG/M
3300031824\|Ga0307413_12001912	Not Available	522	Open in IMG/M
3300031852\|Ga0307410_11351528	Not Available	624	Open in IMG/M
3300031903\|Ga0307407_10398785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	986	Open in IMG/M
3300031903\|Ga0307407_10473504	Not Available	913	Open in IMG/M
3300031995\|Ga0307409_100627573	Not Available	1065	Open in IMG/M
3300031995\|Ga0307409_100763925	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300032002\|Ga0307416_100009500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6371	Open in IMG/M
3300032002\|Ga0307416_100696193	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M
3300032002\|Ga0307416_102777236	Not Available	585	Open in IMG/M
3300032002\|Ga0307416_103297151	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300032004\|Ga0307414_10260293	All Organisms → cellular organisms → Bacteria	1447	Open in IMG/M
3300032004\|Ga0307414_11987759	Not Available	543	Open in IMG/M
3300032005\|Ga0307411_11444196	Not Available	631	Open in IMG/M
3300032005\|Ga0307411_11890960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	555	Open in IMG/M
3300032080\|Ga0326721_10756850	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300032126\|Ga0307415_100530631	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300032126\|Ga0307415_101518518	Not Available	641	Open in IMG/M
3300032126\|Ga0307415_102046173	Not Available	558	Open in IMG/M
3300032126\|Ga0307415_102429389	Not Available	515	Open in IMG/M
3300032159\|Ga0268251_10035723	Not Available	1566	Open in IMG/M
3300032159\|Ga0268251_10076323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1152	Open in IMG/M
3300033551\|Ga0247830_10082717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2213	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	59.85%
Host-Associated	Host-Associated	39.39%
Engineered	Engineered	0.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	53.03%
Plants	Host-Associated → Plants	39.39%
Aquatic	Environmental → Aquatic	6.82%
Solid Waste	Engineered → Solid Waste	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	30.30%
Sediment	Environmental → Aquatic → Sediment	6.06%
Phylloplane	Host-Associated → Plants → Phylloplane	4.55%
Roots	Host-Associated → Plants → Roots	3.79%
Freshwater	Environmental → Aquatic → Freshwater	0.76%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.76%
Grass	Engineered → Solid Waste → Grass	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	30.30%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.06%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	4.55%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	3.79%
Loam	Environmental → Terrestrial → Soil → Loam	2.27%
Sand	Environmental → Terrestrial → Soil → Sand	1.52%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.76%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.76%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.76%
Composting	Engineered → Solid Waste → Grass → Composting	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	30.30%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.06%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	4.55%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	3.79%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.03%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.52%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.52%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.76%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.76%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.76%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	25.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	18.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.36%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	9.85%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.30%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.55%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.79%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	3.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.03%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.52%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.52%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.76%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.76%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.76%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459014	Litter degradation PV2	Engineered	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300027056	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027718	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300030514	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032080	Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2PV_01713820	2170459014	Switchgrass, Maize And Mischanthus Litter	MPPEGFFQAGRTRPGPQIHGPRTGLRPGGSQPGGSSRRPRWDSD
F24TB_105239222	3300000550	Soil	VIGVADRSHSRSSPAIHGRRSSSRHGQETRRSRWDADDGITRRDVSALRWLGEQYAARSDVLRVLLGRLSPGSPRVAGQLGDETLRDVLDRWQERGLIARDR
JGI10216J12902_1074023971	3300000956	Soil	VPEEGFFRAARSRPGPRVHGARSDGSRRPRWDTDAGITARDVAALVWLGNPGC*
F14TB_1001550141	3300001431	Soil	VPDEGFFQAGRTRPGPRVHAAPYGASPGGGRSEDRASRRPRWDIDAGITER
F14TB_1010881281	3300001431	Soil	MPAEGFPQAGRVRSGPRVHGPGTGPPGGGSRRPRWDSDDGITRRDITALRWL
JGI25407J50210_100396271	3300003373	Tabebuia Heterophylla Rhizosphere	VPEEGFFRAGRTRPGPQVHGPRTGPGAGLTGAGTSRRPRWDTDAGITERDVAALRWLGQQYAARSDVLRVLLGRLSPGSPRIEG
JGI25407J50210_100444241	3300003373	Tabebuia Heterophylla Rhizosphere	VPEEGFFRAGRTRPGPNVHGPRTGPPPSGSRPGGRSSRRPRWDTDAGITDRDVAALRWLGQQYAAR
Ga0063356_1062436222	3300004463	Arabidopsis Thaliana Rhizosphere	VPDEGFYRAGRTRPGPRVHGAPYGPPSGSRSGDGSSRRPRWDIDAGITERDVAALCWLGQQYA
Ga0062595_1025923411	3300004479	Soil	VPDEGFYRAGRTRPGPRVHGAPYGPPSGGRSGDGSSRRPRWDIDAGITERDVAALCWLGQQYAARSDVLRVLLGRLSPGSPKVTGQLSE
Ga0066683_104512951	3300005172	Soil	FYRAGRTRPGPRVHGTRSGPQPGEARSGDGSSRRPRWDIDAGITERDVAALCWLGQQYAARSDVLRVLLGRLSPGSPKVTGQLSEQTLRQILGRWENAA*
Ga0058697_101899551	3300005562	Agave	VPDENFYRAGRTRPGPNVHGPRTGPEPDGARPGRGSSRRPRWDTDAGITDRDVAALRWLGQQYGA
Ga0058697_106209411	3300005562	Agave	VPDEGFYRAGRTRPGPRVHSARYGPPPGGARSGDSSSRRQRWDIDAGITER
Ga0081538_102316642	3300005981	Tabebuia Heterophylla Rhizosphere	VPEEGFFRAGRTRPGPNVHGTRPQPSGGSSRRPRWDTDAGITDRDV
Ga0081538_103178971	3300005981	Tabebuia Heterophylla Rhizosphere	VPEEGFFRAGRARPGPNVHGPRSGPPPGGSRSRGSSRRPRWDTDAGITDRDVAALRWLGQQYAARSDVLRVLLGRLSPGSPRVEGLIGEATLRDVLDRWEDRGLVA
Ga0081538_103212091	3300005981	Tabebuia Heterophylla Rhizosphere	VPDEGFSPAGRTRPGPRVHGARSEDGTSRRPRWDIDAGITERDVAALYWLGQQYAARSDVLRVLLGRLSPGSPKVAGQLSEQTL
Ga0075422_105260212	3300006196	Populus Rhizosphere	VPDEGFYRAGRTRPGPRVHGARYGTPPGGIRSGDSSSRRPRWDIDAGITE
Ga0075424_1009021671	3300006904	Populus Rhizosphere	VPEEGFFRAGRTRPSPQVHGPRSGPGAGRPGVGASRRPRWDTDAGITDRDVAALRWLGQQYAARSDVLRVLLGRLSPGSPRVEGQLAETTLRD
Ga0075419_109293201	3300006969	Populus Rhizosphere	VPDEGFYRAGRTRPGPRVHGTRYGPPPGGAQSDDGSSRRPRWDIDAGITERDVAALCWLGQQYAARSDVLRVLLGRLSPGSPKVTGQLSEQTLRQILGRWEDRGLIA
Ga0075419_112684152	3300006969	Populus Rhizosphere	LPAEGFFRAGRTRPGPNVHGARMGPSSGGGRPGGGSSRRPRWDTDAGITDRDVVALRWLGQQYAARSDVLRVLLGRLSPGSPRVEGQLAETTLRDVVTRWEDR
Ga0111539_123744732	3300009094	Populus Rhizosphere	LPAEGFFRAGRTSPGPNVHGPRPGPSGAGSSRRPRWDTDAGITARDVAALRWLGQQYAARADVLRVLLGRRSPGSPRVAGQLGEETLR
Ga0075418_107545062	3300009100	Populus Rhizosphere	LPEEGFFRAARSRPGPRVHAGRPGSSRRPRWDSDAGITERDVAALVWLGQQYAARSDVLRVLLGRLSPGSPRVAG*
Ga0075418_114842521	3300009100	Populus Rhizosphere	VPDEGFYRAGRTRPGPQVHGTRYGPPPGGARAGDSSSRRPRWDIDAGITERDV
Ga0114129_111255681	3300009147	Populus Rhizosphere	VPDEGFYRAGRTRPSPQVHGTRYGPPPGEARSGDGSSRRPRWDIDAGITERDVAALCWLGQQYAARSDVLRVLLGR
Ga0114129_116823652	3300009147	Populus Rhizosphere	VPEEGFFRAGRTRPGPNVHGPRTRPPPGGSRPGGGSSRRPRWDTDAGITARDVAALRW
Ga0111538_108847481	3300009156	Populus Rhizosphere	LPAEGFFRAGRIRPGPNVHGPRTGPSGGSRPGGGSSRRPRWDTDAGITDRDVAALRWLGQQYAARSDVLRVLLGRLSP
Ga0111538_113887451	3300009156	Populus Rhizosphere	VPEEGFFRAGRTRPNPQVHGPRTGPGAGRPGVGASRRPRWDTDAGITDRDVAAL
Ga0111538_133220261	3300009156	Populus Rhizosphere	VPEEGFFRAARSRPGPRVHGPRPGGSRRPRWDSDAGITARDVAALVWLGQQYAARSDVLRVLLGRLSPGSPKVAGQISEQT
Ga0075423_111206502	3300009162	Populus Rhizosphere	VPEEGFFRAGRTRPSPQVHGPRSGPGAGRPGVGASRRPRWDTDAGITARDVAALRWLGQQYAARSDVLRVLLGRLSPGSPRVAGQLGE
Ga0126307_101163973	3300009789	Serpentine Soil	VPDEGFFRAARTRPGPRVHGAPYGPPSGGARSGDGSSRRPRWDIDAGITERDVAALCWLGQQYAARSDVLRVLLGRLSPGSPKVTG
Ga0126307_103545233	3300009789	Serpentine Soil	VPEEGFFRAGRTRPGPNVHGPRTGPPPGGSSRRPRWDTDAGITDRDVAALRWLGQQYAARSDVL
Ga0126307_105375151	3300009789	Serpentine Soil	VPDEGFYRAGRTRPGPRVHGAPYGPPPGGARSEDSSSRRPRWDIDAGITERDVAA
Ga0126313_100302251	3300009840	Serpentine Soil	MPEEGFFRAGRIRPGPQVHGPRTGPSGAGRPAGDSSRRPRWDTDAGITHRDVAAL
Ga0126313_110272471	3300009840	Serpentine Soil	VPEEGFFRAGRTRPGPNVHGPRPRPSGGGRPGGGSSRRPRWDTDAGITDRDVAALCWLGQQYAARADVLR
Ga0105074_10020751	3300010029	Groundwater Sand	VPEEGFFRAGRTRSGPNVHGRRTGPPGGGSSRRPRWDTDAGITDRDVAALRWLGQQYAARSDVLRVLLGR
Ga0126304_102930271	3300010037	Serpentine Soil	VPEEGFFRAGRTRPSPNVHGPKTGPGAGRSGVGASRRPRWDTDAGITDRDVAALRWLGQQYAARSDVLRVLLGRLSPGSPRIE
Ga0126304_111584751	3300010037	Serpentine Soil	VPEEGFFRAGRTRPGPRVHGPHTGPPGGGSSRRPRWDTDAGITDRD
Ga0126304_111722451	3300010037	Serpentine Soil	LPEEGFFRAGRTRPGPNVHGPRTGPPPGGSSRRPRWDTDAGITHRDVAALRWLGQQYAARSDVL
Ga0126308_101462103	3300010040	Serpentine Soil	MPEEGFFRAGRIRPGPQVHGPRTGPSGAGRPAGGSSRRPRWDTDAGITHRDVAALRWLGQQYAARSDVLRVLLGRLSPGSPRVEGL
Ga0126308_107474661	3300010040	Serpentine Soil	VPEEGFFRAGRTRPGPNVHGPRTGPPPGGSSRRPRWDTDAGITHRDVVALRWLGQQYAARSDVLRVLLGRLSPGSPRVAGQIGDATLRDMLDRWEDRGL
Ga0126312_103160712	3300010041	Serpentine Soil	MPEEGFFRAGRTRPGPNVHGSHAGSPPGGSSRRPRWDTDAGITARDVTALRWLGQQYASRSDVLRVLLGRLSPGWC*
Ga0126310_110465211	3300010044	Serpentine Soil	VPEEGFFRAGRTRPSPNVHGPRTRPPPGGSSRRPRWDTDAGITDRDVAALRWLGQQYAARSDVLRVLLGRLSPGSPRVQGQLG
Ga0126311_106114443	3300010045	Serpentine Soil	MPEEGFFRAGRIRPGPQVHGPRTGPSGAGRPAGDSSRR
Ga0138505_1000165081	3300010999	Soil	VPEEGFFRAGRTRPSPQVHGPRTGPGAGRPGVGASRRPRWDTDAGITDRDVAALRWLGQQYAARSDVLRVLLGRLSPGSPR
Ga0137374_105602071	3300012204	Vadose Zone Soil	LPEEGFFRAARARPGPHVHGGSATGSSRRARWDTDAGITERDVAALSWLGQQYAARSDVLRVLLGRLSPGSPKVAGQLSEPTLRQLL
Ga0137374_108720401	3300012204	Vadose Zone Soil	LPEEGFFRAARSRPGPHVHGGGSGAGSSRRTRWDTDAGITERDVAALVWLGQQYA
Ga0137385_106968141	3300012359	Vadose Zone Soil	MPAEGFASAGRTRPAPNVHGPRNGPPPGGSRPGGSARRPRWDTDAGITERDVTALSWLGQQYAARADVLR
Ga0137375_103673083	3300012360	Vadose Zone Soil	LPEEGFFRAARSGPGPRVHGARPGGSRRPRWDTDAGVTARDVAALVWLGQQYAARSDVLRVLLGRL
Ga0137375_106384921	3300012360	Vadose Zone Soil	LPEEGFFRAARSRPGPHVHGPRSGPPPGGSRPGGSSRRPRWDSDAGITARDVAALYWLGQQYAA
Ga0137373_103652881	3300012532	Vadose Zone Soil	VVPDEGFSLAARSRPGPHVHGGRSNGSRRSRWDTDAGVTARDVAALVWLGQQYAARSDVLRVLLGRLSPGSPRVAGQIGEETLRDVLNRWQ
Ga0182000_102241602	3300014487	Soil	VPEEGFYRAGRTRPGPNVHGPRTGPPGGGSSRRPRWDTDAGITDRDVAALRWLGQQYGARADVLRVLLGRLSPGSPRVEGQLG
Ga0182000_104094041	3300014487	Soil	LPAEGFFRAGRTRPGPNVHGPRMRPSSGGGRPGGGGSRRPRWDTDAGITDRDVAALRWL
Ga0182000_104530822	3300014487	Soil	VPEEGFFRAGRTRPGPNVHGPHTGPQGGSRPGGRSSRRPRWDTDAGITDRDVAALRWLGQQYAARADVLRVLLGRLSPGSP
Ga0182001_106939761	3300014488	Soil	VPEEGFFRAGRTRPGPNVHGPRPGRPGGSSRRPRWDTDAGITDRDVAALRWLGQQYAAR
Ga0184608_102127262	3300018028	Groundwater Sediment	VHDEGFYRAVRTRPGPRVHGARYGPSPDGARSDGGSSRRPRWDIDAGITERDVAALCWLGQQYAARSD
Ga0184620_100330984	3300018051	Groundwater Sediment	VPDEAFHRAGRTRPGPQVHGARYGPPPDGARFGDSSSRRPRWDIDAGITERDVAALCWLGQQYAARSDVLRVLLGRLSPGSPKVTGQLSEQ
Ga0184623_105268732	3300018056	Groundwater Sediment	MPDEGFFRAGRTRSGPHVHGPRTGPPPGGSRPGAGASSRRPRWDSDVGITERDVAALRWLGQQYAARADVLRVLLGRLSPGSPRVA
Ga0184617_10325751	3300018066	Groundwater Sediment	VHDEGFYRAGRTRPGPRVHGAPYGPPSGGAGSGDGNSRRPRWDIDAGITERDVAALCWLGQQYAARSDVLRVLLGRLSPGSPKVTGQLSEQTLRQILCRWEDR
Ga0184617_11994492	3300018066	Groundwater Sediment	VPDEGFYRAGRTRLGPRVHGTRYGPPPGDARSGDGSSRRPRWDIDAGITERDVAALCWLGQQYA
Ga0184612_103729652	3300018078	Groundwater Sediment	LPEEGFFRAARSRSGPHVHGPRSGPPPGGSRSGAGGSRRPRWDTDAGITERDVAALRWLGQQYAARSDVLRVLLGRLSPSSTRVAGVLGETTLRDVLGRWEERGL
Ga0184625_101359431	3300018081	Groundwater Sediment	LPAEGFFRAGHTRSGPNVHGPRTGPPPGGRRPGGGSSRRPRWDTDAGITDRDVAALRWLGQQYAARSDVLRVLLGRLSPGSPRIE
Ga0190268_106896801	3300018466	Soil	VPEEGFFRAGRTRPGPNVHGPRPGRPGAESSRRPRWDTDAGITDRDVAALRWLGQQYAARSDVLRVLLGRLSP
Ga0190264_119823272	3300019377	Soil	VPEEGFFRAGRTRPGPNVHGPRTGPPPGGSRPGGGSSRRPRWDTDAGITDRDVAALRWLGQQYAARSDVLRVLLGRLSPGS
Ga0190267_102965541	3300019767	Soil	LPAEGFFRAGRTRSGPNVHGPRTGPPPGGSRSDGGSSRRPRWDTDAGITDRDVVALRWLGQQYAARSDILRVLLGRLSPGAPR
Ga0190267_105654152	3300019767	Soil	MPEEGFFRAGRTRPGPSVHGPRPGPSGDSRPGGGSSRRPRWDTDAGITDRDVAALRWLGQQYAARADV
Ga0190267_106314951	3300019767	Soil	VPEEGFFRAGRTRPGPQVHGPRTGPGAGRPGAGTSRRPRWDTDAGITDRDVAA
Ga0210381_100971301	3300021078	Groundwater Sediment	VPDEGFYRAGRTRPGPQVHGARYGPSPGDARSGDTSSRRPRWDIDAGITERDVAALCWLGQQYAARSDVLRVLLGRLSPGSPKVTGQLSEQTL
Ga0222623_1000511610	3300022694	Groundwater Sediment	MPEEGFFRAGRTRPGPNVHGPRTGPPSGGSSRRPRWDTDAGITDRDVAALRWLGQQYAARSDVLRVLLGRL
Ga0209879_10100304	3300027056	Groundwater Sand	MPDEGFYRAGRTRPGPRVHGAPYGPPSGGARSGDGSSRRPRW
Ga0209795_100222323	3300027718	Agave	VPDEGFFRAGHTRPGPNVHGPRTGPPSGSSRPGGSSRRPRWDID
Ga0209481_105541021	3300027880	Populus Rhizosphere	VPDEGFYRAGRTRPGPRVHGTRYGPPPGGAQSDDGSSRRPRWDIDAGITERDVAALCWLGQQYAARSDVLRVLLGRLSPGSPKVKGQLSEQTL
Ga0209382_101602671	3300027909	Populus Rhizosphere	LPAEGFFRAGRTRPGPNVHGARMGPSSGGGRPGGGSSRRPRWDTDAGITDRDVVALRWLGQQYAARSDVLRVLLGRLSPGSPRVEGQLAETTLRDVLD
Ga0247828_103090121	3300028587	Soil	VPDEGFYRAGRTQPGPRVHGTRYGPSPGDARSGDTSSRRPRWDIDAGITERDVAALCWLGQQYAARSDVLRVLLGRLSPGSPKVTGQLSEQTLRQ
Ga0247818_102815233	3300028589	Soil	VPEEGFFRAGRTRPGPNVHGPRTGPPGGGSSRRPRWDTDAGITDRDVAALRWLGQQYAARSDVLRVLLGRLSPGSPRVEGVIGEAT
Ga0307291_10651243	3300028707	Soil	LPAEGLFRAGHTRPGPHVHGPRIGPSGGGPSRRPRWDTDAGITDRDVAALRWLGQQYAARSDVLR
Ga0307295_101761192	3300028708	Soil	VHDEGFYRAGRTRPGPRVHGAPYGPPSGSAGSGDGNSRRPRWDIDAGITERDVAALCWLGQQYAARSDVLRVLLGRLSPGSPKVTGQLSEQTLRQILGRWEDRGLIARDRL
Ga0307313_101832762	3300028715	Soil	MPEEGFFRAGRTRPGPNVHGPRTGPPSGGSSRRPRWDTDAGITDRD
Ga0307311_102389712	3300028716	Soil	LPDEGFFRAGRTRPGPNVHGPRTGPPGGGSSRRPRWDTDAGITARDVAALRWL
Ga0307301_100469461	3300028719	Soil	MPEEGFFRAGRTRPGPNVHGPRTGPPSGGSSRRPRWDTDAGITDRDVAALRW
Ga0307317_101312032	3300028720	Soil	MPEEGFFRAGRTRPGPNVHGPRTGPPSGGSSRRPRWDTDAGITDRDVAALRWLGQQYAARSDVLRVLLGRLSPGSPRVEGL
Ga0307317_102020852	3300028720	Soil	VPDEGFYQVDRTRPGPRVHGTRYGPSPGDARSGDGSSRRPRWDIDA
Ga0307315_102287992	3300028721	Soil	LPAEGFFRAGRTRPGPNVHGSRTGPPAGGNRPDGGSSRRPRWDTDAGITARDVAALRWLGQQ
Ga0307319_101168401	3300028722	Soil	LPAEGLFRAGHTRPGPHVHGPRIGPSGGGPSRRPRWDTDAGITDRDVAALRWLGQQYAARSDVLRVLLGRLSPGTHGSRA
Ga0307319_103216202	3300028722	Soil	VPEEGFFRAGRTRPGPNVHGPRTEPPRGGGRSGGGSSRRPRWDTDAGITDRDVVALRWL
Ga0307318_101224682	3300028744	Soil	VPEEGFFRAGRTRPGPQVHGPRTGPGAGRPGAGTSRRPRWDTDAGITDRDVAALRWLGQQYGARSDVLRVLLGRLSPGSPRIEGMLGETTLRDVLDRWEDRGLVIRDRL
Ga0307318_102053172	3300028744	Soil	VPEEGFYRAGRTRPGPNVHGPRTEPPRGGGRSGGGSSRRPRWDTDAGITDRDVVALRWLGQQYAARSDVLRVLLGRLSPGSPKVTGQLGEETLRQILDRWEDR
Ga0307287_100706554	3300028796	Soil	LPAEGFFRAGHTRSGPNVHGPRTGPPPGGRRPGGGSSRRPRWDTDAGITDRDVAALRWLGQQYAARSDVLRVLLGRLSPGSPRFVGVLGE
Ga0307287_102563012	3300028796	Soil	MPEEGFFRAGRTRPGPKVHGPRTGPPPGGSSRRPRWDTDAGITDRDVAALRWMGQQYAARSDVLR
Ga0307305_104015322	3300028807	Soil	LPAEGLFRAGHTRPGPHVHGPRIGPSGGGPSRRPRWDTDAGITDRDVAALRWLGQQYAARSDVLRVLLGRLSPGTPRVEGLIAE
Ga0307294_101809962	3300028810	Soil	LPDEGFFRAGRTRPGPNVHGPRTGPPGGGSSRRPRWDTDAGITARDVAALRWLGQQYAARADVLRVLLGRLSPGSPRIEGQLGEATLRDVL
Ga0307292_103308101	3300028811	Soil	VPDEGFFPAGRTRPGPRVHGARYGPSPDGARSDGGSSRRPRWDIDAGITERDVAALCWLGQQYAARSDVLRVLLG
Ga0307302_101932661	3300028814	Soil	VPDEGFYRADRTRPGPRVHGTRYGPSPGDARSGDGSSRRPRWDIDAGITERDVAALCWLGQQYAARSDVLRVLLGRLSPGSPRVKGQLSEQPCARSF
Ga0307302_104898061	3300028814	Soil	VPEEGFHRAGRTRSGPHVHGGRSGADRARRSRWDTDAGVTERDVAALVWLGQQYAARSDVLRVLLGRLSPGSPRVTGQLGEETLRQILDRWDERGLIARDR
Ga0307302_105647891	3300028814	Soil	VPNDDFSWASRTKPGPRVHGPRAGPPPRDDRASAGTSRRPRWDTDAGITERDVAALHWLGQQYAARSDVLRVLLGRLSPGSPKVSGQLSEQTLRQILSRW
Ga0307302_106515231	3300028814	Soil	LPAEGFFRAGRTRPGPNVHGSRTGPPAGGNRPDGGSSRRPRWDTDAGITARDVAA
Ga0307296_106907761	3300028819	Soil	VPDEGFYRADRTRPGPRVHGTRYGPSPGDARSGDGSSRRPRWDIDAGITERDVAALCWLGQQYAARSDVLRVLLGRLSPGSPKVKG
Ga0307286_103345571	3300028876	Soil	VPDEGFYRADRTRPGPRVHGTRYGPSPGDARSGDGSSRRPRWDIDAGITERDVAALCWLGQQYAARSDVLRVLLGRLSPGSPRVKGQLSEQTLRQI
Ga0307278_103836661	3300028878	Soil	MAGPEPNTQGRVRSGPRVHGSRTGAAGGASRRPRWDTDAGVTARDVAALRWIGQQYTARSDVLRVLLGRLSPAP
Ga0307300_101713922	3300028880	Soil	MPEEGFFRAGRTRPGPNVHGPRTGPPSGGSSRRPRWDTDAGITDRDVAALRWLGQQYAARSD
Ga0307308_103994312	3300028884	Soil	LPDEGFFRAGRIRPGPNVHGPRTGPSAGSGSSRRPRWDTDAGITNREVAALRWLGQQYAARCDVLRVLL
Ga0307308_104300211	3300028884	Soil	LPEEGFFRAARSRPGPHVHRGRSGAGGSRRPRWDTDAGVTARDVAALCWLGQQYAARSDVLRVLLGRLSPGSPKVAGQVGE
Ga0247826_111497062	3300030336	Soil	VPEEGFFRAGRTRSGPNVHGPRSGPPPGDGRPGGRSSRRPRWDTDAGITARDVAALRWLGQQYAARADVLRV
Ga0268243_10710382	3300030510	Soil	VPEEGFYRAGRTRPGPNVHGPRTGPPGGGSSRRPRWDTDAGITDRDVAALRWLGQQYGARSDVLRVLLGR
Ga0268253_103431722	3300030514	Agave	VPEEGFFRAGRIRPGPNVHGPRTGPSGSSRPGGGSSRRPRWDTDAGITDRDVAALR
Ga0307408_1004730102	3300031548	Rhizosphere	VPEEGFFRAGRTRPGPNVHGPRPRPSGGGRPGGGSSRRPRWDTDAGITDRDVAALCWLGQQYAARADVLRALLGRLSPGSPGSRA
Ga0307405_111864332	3300031731	Rhizosphere	LPAEGFFRAGRIRPGPNVHGPRTGPPPGGSRSGGASPRRPRWDTDAGITDRDVAALRWLGQQYAARSDVLR
Ga0307405_113022772	3300031731	Rhizosphere	VPEEGFFRAGHTRPGPQVHGPRTGPGAGRPGAGMSRRPRWDTDAGITDRDVAALRWLGQQYAARADVL
Ga0307405_120508581	3300031731	Rhizosphere	VPDEGFIPGGRIRPGPRVHGARYGPSPDDARSDGGSSRRPRWDIDAGITERDVAAL
Ga0307413_100497711	3300031824	Rhizosphere	VPDEGFYRAGRTRPGPRVHGAPYGPPPGGARSEDSSSRRPRWDIDAGITERDVAALCWLGQQYAARSDVLRVLLGRLSPGSPKVAG
Ga0307413_101375903	3300031824	Rhizosphere	VPEEGFFRAGRIRPGPQVHGPRTGPGAGRPGVGTSRRPRWDTDAGITDRDVAALCWLGQQYGARSDVLRVLLGRLSPGSPRIEGMLGETTLRDVLDRWEDRGLVIR
Ga0307413_109533251	3300031824	Rhizosphere	PGPNVHGPRPRPSGGGRPGGGSSRRPRWDTDAGITDRDVAALCWLGQQYAARADVLRALLGRLSPGSPGSRA
Ga0307413_120019121	3300031824	Rhizosphere	VPEEGFFRAGRTRPSPQVHGPRTGPGAGRPGVGASRRPRWDTDAGITDRDVAALRWLGQQYGAR
Ga0307410_113515282	3300031852	Rhizosphere	LPAEGFFRAGRTRPGPNVHGPHTGPPSGGRPAGGSSRRPRWDTDAGITDRDVAALRWLGQQYAARSDVLRVLLGRLSPG
Ga0307407_103987851	3300031903	Rhizosphere	MPEEGFFRAGRTRPGPNVHGSHAGSPPGGSSRRPRWDTDAGITARDVTALRWLGQQYAA
Ga0307407_104735042	3300031903	Rhizosphere	VPEEGFFRAGHTRPGPQVHGPRTGPGAGRSGVGTSRRPRWDTDAGITDRDVTALRWLGQQYAARSDVLRVLLGRLSPGSPRVEGQLAETTLRDVLDR
Ga0307409_1006275731	3300031995	Rhizosphere	VPEEGFFRAGRTRPGPQVHGPRTGPGGGRPGVGASRRPRWDTDAGI
Ga0307409_1007639252	3300031995	Rhizosphere	VPEEGFFLAGRTRPGPQVHGRRTGSGPGRSGVGTSRRPRWDTDAGITDRDVGALRWLGQQYAARADVLRVLLGRLSPGSPRIEGQLGETTLRDVLDR
Ga0307416_1000095001	3300032002	Rhizosphere	VPEEGFFRAGHTRPGPQVHGPRTGPGAGRSGVGTSRRPRWDTDAGITDRDVTALRWLGQQYAARSDVLRVLLGRLSPGSPRVEGQLAETTLRDVLDRWEDRGLITRD
Ga0307416_1006961932	3300032002	Rhizosphere	VPEEGFFRAGHTRPGPQVHRPRTGPPPGSGRSGGGSSRRPRWDTDAGITDRDVAALCWLG
Ga0307416_1027772361	3300032002	Rhizosphere	VPEEGFFRAGRTRPSPQVHGPRTGPGAGRPGVGASRRPRWDTDVGITDRDVAALRWLGQQYAARSDVLRVL
Ga0307416_1032971511	3300032002	Rhizosphere	VPEEGFFRAGRTRPGPNVHGPRPRPSGGGRPGGGSSRRPRWDTDAGITDRDVAALCWLGQQYAARADVLRALLG
Ga0307414_102602931	3300032004	Rhizosphere	VPEEGFFRAGRTRPGPQVHGPRTGPGAGRPGAGTSRRPRWDTDAGITDRDVAALRWLGQQYAARSDVLRVLLGRLSPGSPRIEGQLGETTLRDVLA
Ga0307414_119877592	3300032004	Rhizosphere	VPEEGFFRAGRTRPGPNVHGPRPGPSGGSRPGGSSRRPRWDTDAGITARDVAALGWLGQQ
Ga0307411_114441962	3300032005	Rhizosphere	LPAEGFFRAGRTSPGPSVHGPRTWTPPGGSSQGGGSSRRPRWDTDAGITDRDVAALRWLGQQYAGRADVLRVVLGRLSPGSPRVAGQLGEQTL
Ga0307411_118909601	3300032005	Rhizosphere	VPEEGFYRAGRTRPGPNVHGPRTGAPPGGGSSRRPRWDTDAGITDRDVAALRWLGQQYAARADVLRVLLGRLSPGSPRVEGLIG
Ga0326721_107568502	3300032080	Soil	VPEEGFFRAGRTRPGPQVHGPRTGPGAGRPGAGTSRRPRWDTDAGITDRDVAALRWLGQQYAARSDVLRVLLGRLSPGSPRIEGMLGETTLRDV
Ga0307415_1005306311	3300032126	Rhizosphere	MPEEGFYRAGRTHPGPQVHGPRTGPPSGGTGGGSSRRPRWDTDAGITDRDVAALRWLGQQYAARSDVLRVLLGRLSPGSPR
Ga0307415_1015185182	3300032126	Rhizosphere	VPEEGFFRAGRTHPGPNVHGPRSGPPPGGSRSGGGSLRRPRWDTDAGITDRDVAALRWLGQQYAARSDVLRVLLGRLSPGSPRIEGQLGETTLRDVLDRWEDRGL
Ga0307415_1020461731	3300032126	Rhizosphere	VPDEGFFPASRTRPGPRVHGPRYGPSPGGARSDGGSARRPRWDIDAGITERDVAALCWLGQQYAARSDVLRVLLGRLSPGSPKIVGQLSEQTLRQILGRW
Ga0307415_1024293891	3300032126	Rhizosphere	VHGPRPRPSGGGRPGGGSSRRPRWDTDAGITDRDVAALCWLGQQYAARADVLRALLGRLSPGSPGSRA
Ga0268251_100357232	3300032159	Agave	VPDENFYRAGRTRPGPNVHGPRTGPEPDGARPGRGSSRRPRWDTDAGITDRDVAALRWLGQQYGARADVLRVLLGRLSPGAPRIEGQLGEETLRQILDRWEPAA
Ga0268251_100763231	3300032159	Agave	LPAEGFFRAGRIRPGPNVHGPRTGPSGGSRPGVGSSRRPRWDTDAGITNRDVAALRWLGQQYAARADVLRVLLGRLSPGSPRVEGQLGET
Ga0247830_100827171	3300033551	Soil	VPEEGFFRAGRTRPGPNVHGPRTGPPGDGSSRRPRWDTDAGITARDVAALRWLGQQYA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F061023

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences