Metagenome / Metatranscriptome Family F061096

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061096
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	61 residues
Representative Sequence	MVAKYDIFKKTNDSVVWVEAVEDIVTAKKRLISLASDGTDGYRIWDSTRQQFIDLLDDCA
Number of Associated Samples	72
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	72.52 %
% of genes near scaffold ends (potentially truncated)	31.06 %
% of genes from short scaffolds (< 2000 bps)	75.76 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.303 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (35.606 % of family members)
Environment Ontology (ENVO)	Unclassified (59.091 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.91% β-sheet: 23.86% Coil/Unstructured: 60.23%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF00072	Response_reg	12.88
PF00118	Cpn60_TCP1	4.55
PF00756	Esterase	2.27
PF07238	PilZ	2.27
PF16868	NMT1_3	1.52
PF04972	BON	1.52
PF01904	DUF72	1.52
PF13083	KH_4	1.52
PF00078	RVT_1	0.76
PF12705	PDDEXK_1	0.76
PF03544	TonB_C	0.76
PF12728	HTH_17	0.76
PF08308	PEGA	0.76
PF12779	WXXGXW	0.76
PF05163	DinB	0.76
PF03992	ABM	0.76
PF00313	CSD	0.76
PF01258	zf-dskA_traR	0.76
PF14023	DUF4239	0.76
PF00593	TonB_dep_Rec	0.76
PF01654	Cyt_bd_oxida_I	0.76
PF00166	Cpn10	0.76
PF02518	HATPase_c	0.76
PF14224	DUF4331	0.76
PF00515	TPR_1	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	4.55
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	1.52
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.76
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.76
COG1271	Cytochrome bd-type quinol oxidase, subunit 1	Energy production and conversion [C]	0.76
COG1734	RNA polymerase-binding transcription factor DksA	Transcription [K]	0.76
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.30 %
All Organisms	root	All Organisms	44.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.30 %
cellular organisms	root	All Organisms → cellular organisms	44.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.30 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.18 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	1.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.30 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	19.70 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.76 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.76 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.30 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	12.12 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.52 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	1.52 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.76 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.30 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.12 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.52 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	1.52 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.76 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.76 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.30 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.12 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	1.52 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.76 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.76 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.76 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.76 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.30 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.12 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	1.52 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.76 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.76 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.76 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.76 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.30 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.12 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	1.52 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	0.76 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.76 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.76 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.76 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.30 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.12 %
Panarthropoda	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda	1.52 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	0.76 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.76 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.76 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.76 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.30 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.12 %
Arthropoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	1.52 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	0.76 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.76 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.76 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.76 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10266958	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	688	Open in IMG/M
3300003505\|JGIcombinedJ51221_10105029	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300004099\|Ga0058900_1070725	Not Available	556	Open in IMG/M
3300004631\|Ga0058899_10021426	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	1468	Open in IMG/M
3300005536\|Ga0070697_100311621	All Organisms → cellular organisms → Bacteria	1354	Open in IMG/M
3300005538\|Ga0070731_10986501	Not Available	558	Open in IMG/M
3300005602\|Ga0070762_10490235	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	804	Open in IMG/M
3300005602\|Ga0070762_10739807	Not Available	662	Open in IMG/M
3300005764\|Ga0066903_101678528	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300005921\|Ga0070766_10169948	All Organisms → cellular organisms → Bacteria	1347	Open in IMG/M
3300006176\|Ga0070765_100075343	Not Available	2845	Open in IMG/M
3300006176\|Ga0070765_100179612	Not Available	1909	Open in IMG/M
3300006176\|Ga0070765_101026298	Not Available	779	Open in IMG/M
3300006176\|Ga0070765_101905285	Not Available	557	Open in IMG/M
3300010048\|Ga0126373_10034411	All Organisms → cellular organisms → Bacteria → Acidobacteria	4409	Open in IMG/M
3300010048\|Ga0126373_10609337	Not Available	1145	Open in IMG/M
3300010376\|Ga0126381_100176913	All Organisms → cellular organisms → Bacteria	2830	Open in IMG/M
3300012181\|Ga0153922_1010340	All Organisms → cellular organisms → Bacteria	2245	Open in IMG/M
3300012181\|Ga0153922_1053974	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	893	Open in IMG/M
3300012202\|Ga0137363_10133654	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1930	Open in IMG/M
3300012202\|Ga0137363_10284278	All Organisms → cellular organisms → Bacteria → Acidobacteria	1354	Open in IMG/M
3300012205\|Ga0137362_10527652	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1020	Open in IMG/M
3300012205\|Ga0137362_10968991	Not Available	725	Open in IMG/M
3300012361\|Ga0137360_11348764	Not Available	615	Open in IMG/M
3300012923\|Ga0137359_10495409	Not Available	1079	Open in IMG/M
3300012923\|Ga0137359_10726309	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	864	Open in IMG/M
3300012923\|Ga0137359_10977011	Not Available	727	Open in IMG/M
3300012924\|Ga0137413_11214458	Not Available	602	Open in IMG/M
3300012971\|Ga0126369_10548505	Not Available	1220	Open in IMG/M
3300020062\|Ga0193724_1120751	Not Available	518	Open in IMG/M
3300020199\|Ga0179592_10121273	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300020579\|Ga0210407_10063114	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2775	Open in IMG/M
3300020579\|Ga0210407_10417295	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300020579\|Ga0210407_11359771	Not Available	528	Open in IMG/M
3300020580\|Ga0210403_10605070	Not Available	885	Open in IMG/M
3300020580\|Ga0210403_10725819	Not Available	794	Open in IMG/M
3300020581\|Ga0210399_10019391	All Organisms → cellular organisms → Bacteria	5386	Open in IMG/M
3300020581\|Ga0210399_10023473	All Organisms → cellular organisms → Bacteria	4896	Open in IMG/M
3300020581\|Ga0210399_10038121	All Organisms → cellular organisms → Bacteria	3845	Open in IMG/M
3300020581\|Ga0210399_10094844	All Organisms → cellular organisms → Bacteria	2435	Open in IMG/M
3300020581\|Ga0210399_10243655	Not Available	1498	Open in IMG/M
3300020582\|Ga0210395_10266873	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1287	Open in IMG/M
3300020582\|Ga0210395_10678745	Not Available	771	Open in IMG/M
3300020582\|Ga0210395_10928941	Not Available	646	Open in IMG/M
3300020583\|Ga0210401_10094823	All Organisms → cellular organisms → Bacteria	2803	Open in IMG/M
3300020583\|Ga0210401_10378513	Not Available	1278	Open in IMG/M
3300020583\|Ga0210401_11161742	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300020583\|Ga0210401_11331076	Not Available	576	Open in IMG/M
3300020583\|Ga0210401_11584619	Not Available	512	Open in IMG/M
3300021170\|Ga0210400_10332917	All Organisms → cellular organisms → Bacteria	1249	Open in IMG/M
3300021171\|Ga0210405_10007393	All Organisms → cellular organisms → Bacteria	9654	Open in IMG/M
3300021171\|Ga0210405_10249905	Not Available	1403	Open in IMG/M
3300021171\|Ga0210405_10923534	Not Available	662	Open in IMG/M
3300021178\|Ga0210408_10692998	Not Available	803	Open in IMG/M
3300021178\|Ga0210408_11009251	Not Available	644	Open in IMG/M
3300021180\|Ga0210396_10094705	All Organisms → cellular organisms → Bacteria	2704	Open in IMG/M
3300021181\|Ga0210388_10421278	All Organisms → cellular organisms → Bacteria	1173	Open in IMG/M
3300021181\|Ga0210388_10582309	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	980	Open in IMG/M
3300021403\|Ga0210397_10013328	All Organisms → cellular organisms → Bacteria → Acidobacteria	4976	Open in IMG/M
3300021404\|Ga0210389_10213371	Not Available	1506	Open in IMG/M
3300021404\|Ga0210389_11423996	Not Available	528	Open in IMG/M
3300021405\|Ga0210387_11226710	Not Available	650	Open in IMG/M
3300021405\|Ga0210387_11778517	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300021407\|Ga0210383_10693675	Not Available	875	Open in IMG/M
3300021420\|Ga0210394_10150291	All Organisms → cellular organisms → Bacteria	2023	Open in IMG/M
3300021432\|Ga0210384_10061226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3401	Open in IMG/M
3300021432\|Ga0210384_10132224	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2239	Open in IMG/M
3300021474\|Ga0210390_10303664	All Organisms → cellular organisms → Bacteria	1352	Open in IMG/M
3300021474\|Ga0210390_10569928	Not Available	951	Open in IMG/M
3300021474\|Ga0210390_11411912	Not Available	554	Open in IMG/M
3300021477\|Ga0210398_10470906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1023	Open in IMG/M
3300021560\|Ga0126371_10114426	Not Available	2710	Open in IMG/M
3300021560\|Ga0126371_12732683	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	598	Open in IMG/M
3300022531\|Ga0242660_1254791	Not Available	502	Open in IMG/M
3300022722\|Ga0242657_1238340	Not Available	517	Open in IMG/M
3300026489\|Ga0257160_1067109	Not Available	632	Open in IMG/M
3300027071\|Ga0209214_1050897	Not Available	561	Open in IMG/M
3300027109\|Ga0208603_1028564	Not Available	880	Open in IMG/M
3300027371\|Ga0209418_1003674	Not Available	2056	Open in IMG/M
3300027371\|Ga0209418_1039645	Not Available	830	Open in IMG/M
3300027575\|Ga0209525_1000036	All Organisms → cellular organisms → Bacteria	52685	Open in IMG/M
3300027575\|Ga0209525_1000079	All Organisms → cellular organisms → Bacteria	32504	Open in IMG/M
3300027605\|Ga0209329_1037072	Not Available	1022	Open in IMG/M
3300027855\|Ga0209693_10173197	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300027855\|Ga0209693_10532974	Not Available	559	Open in IMG/M
3300027889\|Ga0209380_10047102	All Organisms → cellular organisms → Bacteria → Acidobacteria	2446	Open in IMG/M
3300028047\|Ga0209526_10028080	All Organisms → cellular organisms → Bacteria	3952	Open in IMG/M
3300028906\|Ga0308309_10069824	Not Available	2615	Open in IMG/M
3300028906\|Ga0308309_10234580	Not Available	1528	Open in IMG/M
3300030862\|Ga0265753_1002046	Not Available	1887	Open in IMG/M
3300031057\|Ga0170834_105418361	Not Available	563	Open in IMG/M
3300031057\|Ga0170834_107317560	Not Available	518	Open in IMG/M
3300031128\|Ga0170823_10308826	Not Available	1052	Open in IMG/M
3300031128\|Ga0170823_15858879	Not Available	506	Open in IMG/M
3300031231\|Ga0170824_117593343	Not Available	570	Open in IMG/M
3300031231\|Ga0170824_122840497	Not Available	697	Open in IMG/M
3300031231\|Ga0170824_123382263	Not Available	504	Open in IMG/M
3300031474\|Ga0170818_109577118	Not Available	518	Open in IMG/M
3300031573\|Ga0310915_10551380	Not Available	818	Open in IMG/M
3300031708\|Ga0310686_100854087	All Organisms → cellular organisms → Bacteria → Acidobacteria	3102	Open in IMG/M
3300031715\|Ga0307476_10338849	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	1106	Open in IMG/M
3300031715\|Ga0307476_10703385	Not Available	748	Open in IMG/M
3300031715\|Ga0307476_10889739	Not Available	657	Open in IMG/M
3300031715\|Ga0307476_11305173	Not Available	530	Open in IMG/M
3300031718\|Ga0307474_10047455	All Organisms → cellular organisms → Bacteria	3167	Open in IMG/M
3300031718\|Ga0307474_10064583	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2712	Open in IMG/M
3300031718\|Ga0307474_10470583	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300031720\|Ga0307469_10580558	Not Available	998	Open in IMG/M
3300031753\|Ga0307477_10138897	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1695	Open in IMG/M
3300031753\|Ga0307477_10159173	All Organisms → cellular organisms → Bacteria	1574	Open in IMG/M
3300031753\|Ga0307477_10513533	Not Available	813	Open in IMG/M
3300031754\|Ga0307475_10035055	All Organisms → cellular organisms → Bacteria	3678	Open in IMG/M
3300031754\|Ga0307475_10284235	Not Available	1327	Open in IMG/M
3300031754\|Ga0307475_10481756	Not Available	996	Open in IMG/M
3300031754\|Ga0307475_10525911	Not Available	949	Open in IMG/M
3300031754\|Ga0307475_11054462	Not Available	637	Open in IMG/M
3300031754\|Ga0307475_11559208	Not Available	505	Open in IMG/M
3300031820\|Ga0307473_11079936	Not Available	590	Open in IMG/M
3300031823\|Ga0307478_10103676	All Organisms → cellular organisms → Bacteria → Acidobacteria	2206	Open in IMG/M
3300031823\|Ga0307478_10297966	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1320	Open in IMG/M
3300031823\|Ga0307478_10354822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1209	Open in IMG/M
3300031823\|Ga0307478_11036629	Not Available	685	Open in IMG/M
3300031823\|Ga0307478_11618961	Not Available	534	Open in IMG/M
3300031833\|Ga0310917_10070368	Not Available	2194	Open in IMG/M
3300031962\|Ga0307479_10012230	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8021	Open in IMG/M
3300031962\|Ga0307479_10571203	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1113	Open in IMG/M
3300032068\|Ga0318553_10649412	Not Available	552	Open in IMG/M
3300032174\|Ga0307470_10109116	All Organisms → cellular organisms → Bacteria	1606	Open in IMG/M
3300032180\|Ga0307471_100047220	All Organisms → cellular organisms → Bacteria → Acidobacteria	3517	Open in IMG/M
3300032180\|Ga0307471_101631363	Not Available	800	Open in IMG/M
3300032205\|Ga0307472_100479630	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1066	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.48%
Host-Associated	Host-Associated	1.52%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.48%
Fungi	Host-Associated → Fungi	1.52%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.48%
Mycelium	Host-Associated → Fungi → Mycelium	1.52%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.79%
Loam	Environmental → Terrestrial → Soil → Loam	19.70%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	1.52%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	63.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	18.94%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.15%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	1.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	35.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	21.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.09%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	9.09%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.58%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	6.06%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.27%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	1.52%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004099	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF236 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012181	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG	Host-Associated	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_102669581	3300001867	Forest Soil	MIARYDIFKKQDNSVVWVETAQDIVAAKKLLKSLASDGTDEYRIWDSTREQFIDVLEDCA
JGIcombinedJ51221_101050291	3300003505	Forest Soil	PSSKILSPAGGSMVAKYDIFKKTDGSVLWVEAVEDIVKVKERLISLASQGTDDYRVWDSTREQFIDVLDDCA*
Ga0058900_10707252	3300004099	Forest Soil	MVLQYDIFKKTKSSVVWVEAVEDIVTAKKRLISLASGRTDDYRIWDSSKQQFIDQLDDCT
Ga0058899_100214262	3300004631	Forest Soil	MPLQYDIFKKTKNSVVWVEAVEDIVTAKKRLISLASGRTDDYRIWDSSKQQFIDQLDDCT
Ga0070697_1003116211	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LEVSMAAKYDIFKKTNNSVVWVEAVEDIVTAKKRLISLASDGTEGYRIWDSAKQQFIDVMDDCA*
Ga0070731_109865011	3300005538	Surface Soil	MVAKYDIFKKTDGSVLWVEAVKDIVKVKERLISLASQGTNDYRVWDSTREQFIDVLDDCA
Ga0070762_104902351	3300005602	Soil	VAKYDIFRKTNDSVVWVEAVEDIVAVKNRLISLGSADEYRVWDSTEQRFVDVLDDCA*
Ga0070762_107398071	3300005602	Soil	VAAKYDIFKKTNNSVVWGEAVEDIVTAKKRLISLASDGTDGYRIWNSTKQQFIDLLDD
Ga0066903_1016785282	3300005764	Tropical Forest Soil	MTMIPKYDIFRKTNDGSVVWVEAVEDIFTAKKRLISLSSNGRGEYRIWDSSKEQFVDLDDCA*
Ga0070766_101699481	3300005921	Soil	QYDIFKKTKNSVVWVEAVEDIVTAKKRLISLASGRTDDYRIWDSSKQQFIDQLDDCT*
Ga0070765_1000753432	3300006176	Soil	MVAKYDIFKKTDGSVLWVEAVEDIVEVKKRLMSLASQGRDDYRVWDSTRQQFIDVLDDRA
Ga0070765_1001796124	3300006176	Soil	MALYAPPQHLSWLEVFMAAKYDIFKKTNDSVIWVEAVEDIVAVKKRLISLGSVDEYRVWDSTEQRFVDVLDDCA*
Ga0070765_1010262983	3300006176	Soil	LPLCSFRLEASMVLQYDIFKKTKRSVVWVEAVVDIVTAKKRLISLASGRTDDYRIWDSSKQQFIDQLDDCT*
Ga0070765_1019052851	3300006176	Soil	MVAKYDIFKTTNGSVVWVEAVEDIVTAKKRLISLASDGTDGYRIWDSTRQ
Ga0126373_100344115	3300010048	Tropical Forest Soil	MIPKYDIFRKTNDGSVVWVEAVEDIFTAKKRLISLSSNGRGEYRIWDSSKEQFVDLDDCA
Ga0126373_106093371	3300010048	Tropical Forest Soil	MISKYDIFRKTNDSVIWVEAVEDIVKVKKRLIILTSDGKNDYRVWDSTREQFIDVLDDCA
Ga0126381_1001769131	3300010376	Tropical Forest Soil	MVAKYDIFRKTNDSVIWVEAVEDIVKVKKRLISLTSDGKNDYRVWDSTREQFIDVLDDCA
Ga0153922_10103401	3300012181	Attine Ant Fungus Gardens	MTAKYDIFKKINESILWVEAVEDIVTLKKRLTGLASNGTDDYRVWDSTQQKFIDPLNDCA
Ga0153922_10539742	3300012181	Attine Ant Fungus Gardens	MTLKYDIFKKTSDSVIWVEAVEDIVAAKKRLISLGSADDYRIWDSAKQQFVDLMDDCA*
Ga0137363_101336542	3300012202	Vadose Zone Soil	LDGGIVAFSAEFSPLEVSMVAKYDIFRKTNDSVVWVEAVEDIVKVKKRLISLASDGKNDYRVWDSTREQFIDVLDDCA*
Ga0137363_102842782	3300012202	Vadose Zone Soil	MVAKYDIFKKTNNSVVWVEAVEDIVTAKKRLISLALDGTDGYRIWDSTKQQFIDVLDDCA
Ga0137362_105276522	3300012205	Vadose Zone Soil	MVAKYDIFKKINESILWVEAVEDIITLKKRLTGLASTGTDDYRVWDSTQQKFIDPLDDCA
Ga0137362_109689912	3300012205	Vadose Zone Soil	LDGGIVAFSAEFSPLEVSMVAKYDIFRKTNDSVVWVEAVEDIVKVKKCLISLASDGKNDYRVWDSTREQFIDVLDDCA*
Ga0137360_113487641	3300012361	Vadose Zone Soil	IFKKTNNSVVWVEAVEDIVTAKKRLISLASDGTDGYRIWDSAREQFIDVLDDCA*
Ga0137359_104954092	3300012923	Vadose Zone Soil	MVAKYDIFKKINESVLWVEAVEDIVTLKKRLTGLASNGTDDYRVWDSTRQKFIDPLNDYA
Ga0137359_107263091	3300012923	Vadose Zone Soil	KINESILWVEAVEDIITLKKRLTGLASTGTDDYRVWDSTQQKFIDPLDDCA*
Ga0137359_109770112	3300012923	Vadose Zone Soil	MTAKYGIFKKINESILWVEAVEDIVTLKKRLSGLASTGTDDYRVWDSTQQKFIDPLDDCA
Ga0137413_112144581	3300012924	Vadose Zone Soil	MVAKYDIFKKTDNSVVWVEAVEDIVTAKKRLISLALDGTDGYRIWDSTKQQFIDV
Ga0126369_105485052	3300012971	Tropical Forest Soil	MIPKYDIFRKTNGSVVWVEAVEDIFTAKKRLISLSSNGREEYRIWDSSKEQFVDLDDCA*
Ga0193724_11207512	3300020062	Soil	MVAKYDIFKKINESILWVEAVEDIVTLKKRLMGLASTGTDDYRVWDSTQQKFIDPLDDCA
Ga0179592_101212731	3300020199	Vadose Zone Soil	PPQNSLCLVVSMVAKYDIFRKTNDSVVWVEAVEDIVKVKKRLISLASDGKNDYRVWDSTREQFIDVLDDCA
Ga0210407_100631143	3300020579	Soil	MIPKYDIFKKTNNFCVWMEAVEDIVTAKKRLVSLASDGADDYRIWDSTRQQFIDQLDDCA
Ga0210407_104172952	3300020579	Soil	MVLQYDIFKKTKNSVVWVEAVEDIVTAKKRLISLASGRTDDYRIWDSSKQQFIDQLDDCA
Ga0210407_113597712	3300020579	Soil	MIAKYDIFRKTNDSVVWVEAVEDIVTVKKRLISLASDGKNDYRVWDSTRERFIDVLDDCA
Ga0210403_106050702	3300020580	Soil	GWHPVPSSKILSPAGGSMVAKYDIFKKTDGSVLWVEAVEDIVKVKERLISLASQGTDDYRVWDSTRQQFIDVLDDCA
Ga0210403_107258192	3300020580	Soil	LEASMPLQYDIFKKTKNSVVWVEAVEDIVTAKKRLISLASGRTDDYRIWDSSKQQFIDQLDDCA
Ga0210399_100193912	3300020581	Soil	MVAKYDIFKTTNGSVVWVEAVEDIVTAKKRLISLASDGTEGYRIWDSTRQQFIDLMEDCA
Ga0210399_100234738	3300020581	Soil	MVARYDIFKKTDASVLWVEAVEDIVTVKKRLISLASQGTDDYRVWDSTRQQFIDVLDDPA
Ga0210399_100381212	3300020581	Soil	MPLQYDIFKKTKNSVVWVEAVEDIVTAKKRLISLASGRTDDYRIWDSSKQQFIDQLDDCA
Ga0210399_100948441	3300020581	Soil	MVAKYDIFKKTDGSVLWVEAVEDIVKVKERLISLASQGTDDYRVWDSTREQFIDVLDDCA
Ga0210399_102436551	3300020581	Soil	MVAKYDIFKKTDGSVLWVEAVEDIVKVKERLISLASQGTDDYRVWDSTRQQFIDVLDDCA
Ga0210395_102668732	3300020582	Soil	MRLRKHLSWLEVFVAAKYDVFKKTNNSVVWGEAVEDIVTAKKRLISLASDGTDGYRIWNSTKQQFIDLLDYCA
Ga0210395_106787451	3300020582	Soil	MVAKYDIFKKTNGSVIWVEAVEDIVTAKKRLISLASDGTDGYRIWDSAQQQFIDLLDDCA
Ga0210395_109289411	3300020582	Soil	MVAKYDIFKKTDGSVLWVEAVEDIVKVKERLISLASQGTDDYRVWDSTRQQFIDVLDD
Ga0210401_100948232	3300020583	Soil	MRLRKHLSWLEVFVAAKYDIFKKTNNSVVWGEAVEDIVTAKKRLISLASDGTDGYRIWNSTKQQFIDLLDYCA
Ga0210401_103785133	3300020583	Soil	MIAKYDIFRKTNDSVVWVEAVEDIVKVKKRLISLASDGKNDYRVWDSTREQFIDVLDDCA
Ga0210401_111617421	3300020583	Soil	MVAKYDIFKKTDGSVLWVEAVEDIVKVKERLISLASQGTDDYRVWDSTREQFIDVLDDCG
Ga0210401_113310761	3300020583	Soil	KYDIFKKTNDSVIWVEAVEDIVAVKKRLINLGSADEYCVWDSTEQRFVDVCLYQRDS
Ga0210401_115846191	3300020583	Soil	MLDGRIVGFSAELLFRLEVSMVAKYDIFKKTNDSVVWVETVEDIVTAKKRLLSLAADGTDGYRIWDSTRERFIDLLDDCA
Ga0210400_103329171	3300021170	Soil	AKYDIFKKTDGSVLWVEAVEDIVKVKERLISLASQGTDDYRVWDSTREQFIDVLDDCA
Ga0210405_100073935	3300021171	Soil	VVAKYDIFKKTDGSVVWVEAVEDIVTVKKRLMSLGSDDYRVWDSTTQQFIDVLDDCA
Ga0210405_102499051	3300021171	Soil	MVAKYDIFRKTNDSVVWVEAVEDIVAVKKRLISLGAADEYRVWDSTEQRFVDVLDDCA
Ga0210405_109235341	3300021171	Soil	MVAQYDIFRKTDNSVVWVEAVEDIVSVKKRLLCLASSGTDIYCVWDATRQQFINVLDDCA
Ga0210408_106929981	3300021178	Soil	MIAKYDIFKTTNNSVVSVEAAEDIVTAKKRLISLASNGTDGYRIWDSTKQQFIDLLDDCA
Ga0210408_110092512	3300021178	Soil	MVAKYDIFKKTDGSVLWVEAVEDIVKVKERLISLASQGTDDYRVWDSTREQFINVLDDCA
Ga0210396_100947052	3300021180	Soil	MHRRLPPQNLSFRLEVSMVAKYDIFKTTNGSVVWVEAVEDIVTAKKRLISLASDGTDGYRIWDSTRQQFIDLMEDCA
Ga0210388_104212782	3300021181	Soil	VPQQYDIFRKRFDGSCEWVEAAEDIHQAKKRLISLASAEPANYLIWDSSLQRFIRPFEEC
Ga0210388_105823092	3300021181	Soil	MVAKYDIFKKTDGSVLWVEAVEDIVKVKERLIGLASQGTDDYRVWDSTREQFIDVLDDCA
Ga0210397_100133286	3300021403	Soil	MVAKYDIFKKINESILWVEAVEDIVTLKKRLMGLASTGTDDYRVWDSTQQKFIDPLKNCA
Ga0210389_102133711	3300021404	Soil	KNLPPQCSFRLEASMVLQYDIFKKTKNSVVWVEAVEDIVTAKKRLISLASGRTDDYRIWDSSKQQFIDQLDDCA
Ga0210389_114239961	3300021404	Soil	MAAKYDIFKKTNDSVIWVEAVEDIVAVKKRLINLGSADEYCVWDSTEQRFV
Ga0210387_112267101	3300021405	Soil	MVLQYDIFKKTKNSVVWVEAVEDIVTAKKRLISLASGRTDDYRIWDSSKEQFIDQLDDCA
Ga0210387_117785171	3300021405	Soil	KKTNNSVVWVEAVEDIVTAKKRLISLASNGTDGYRIWDSTKQQFIDLLDDCA
Ga0210383_106936752	3300021407	Soil	PVEVSMIPKYNIFKKTDTSVVWIEAAEDIVTAKKRLISLASDGTDYRIWDSTRQQFIDVLDDSA
Ga0210394_101502914	3300021420	Soil	VAAKYDIFKKTNNSVVWGEAVEDIVTAKKRLISLASDGTDGYRIWNSTKQQFIDLLDYCA
Ga0210384_100612264	3300021432	Soil	ASMVLQYDIFKKTKNSVVWVEAVEDIVTAKKRLISLASGRTDDYRIWDSSKQQFIDQLDDCA
Ga0210384_101322243	3300021432	Soil	VAAKYDVFKKTNNSVVWGEAVEDIVTAKKRLISLASDGTDGYRIWNSTKQQFIDLLDYCA
Ga0210390_103036641	3300021474	Soil	ILSPAEGSMVAKYDIFKKTDGSVLWVEAVEDIVKVKERLISLASQGTDDYRVWDSTREQFIDVLDDCG
Ga0210390_105699281	3300021474	Soil	MTPKYDIFKKTNNSVVWVEAVEDIVTAKKRLISLASDGTDGYRIWDSTRERVIDLLDDCA
Ga0210390_114119121	3300021474	Soil	MHRGLPPQNLSFRLEVSMVAKYDIFKTTNGSVVWVEAVEDIVTAKKRLISLASDGTEGYRIWDSTRQQFIDLMEDCA
Ga0210398_102587801	3300021477	Soil	LQKDKKSVVWVEAVEDIVTAKKRLISLASGRTDDYRIWDSSKQQFIDQLDDCA
Ga0210398_104709061	3300021477	Soil	MPLQYDIFKKTKNSVVWVEAVEDIVTAKKRLISLASGRTDDYRIWDSSKQQFIDQL
Ga0126371_101144263	3300021560	Tropical Forest Soil	MTMIPKYDIFRKTNDGSVVWVEAVEDIFTAKKRLISLSSNGREEYRIWDSSKEQFVDLDDCA
Ga0126371_127326832	3300021560	Tropical Forest Soil	MVAKYDIFRKTNDSVIWVEAVEDIVEVKKRLIGLTSDGKNDYRVWDSTREQFIDVLDDCA
Ga0242660_12547912	3300022531	Soil	VAAKYDIFKKTNNSVVWVEAVEDIVTAKKRLISLASDGTDGYRIWNSTKQQFIDLLDYCA
Ga0242657_12383402	3300022722	Soil	SMVAKYDIFKKTDGSVLWVEAVEDIVKVKERLISLASQGTDDYRVWDSTREQFIDVLDDC
Ga0257160_10671092	3300026489	Soil	MVAKYDIFRKTNDSVVWVEAVEDIVKVKKRLISLASDGKNDYRVWDSTREQFIDVLDDCA
Ga0209214_10508971	3300027071	Forest Soil	MAAKYDIFKKTNNSVVWVEAVEDIVTAKKRLISLASDGTEGYRIWDSAKQQFIDVMDDCA
Ga0208603_10285644	3300027109	Forest Soil	MVAKYDIFKKTDGSVLWVEAVEDIVKVKERLISLASQGTDDYRVWDSTREQFIDV
Ga0209418_10036741	3300027371	Forest Soil	MVAKYDIFKKTNNSVVWVEAVEDIVTAKKRLISLASDGTEGYRIWDSAKQQFIDVMDDCA
Ga0209418_10396451	3300027371	Forest Soil	MLAKYDIFKTTNGSVVWVEAVEDIVTAKKRLISLASDGTDGYRIWDSTRQQFIDLMEDCA
Ga0209525_100003633	3300027575	Forest Soil	MVAKYDIFKKTNNSVVWVEAVEDIVTAKKRLISLASDGTDGYRIWDSTKQQFIDPLDDCA
Ga0209525_100007934	3300027575	Forest Soil	MVAKYDIFKKTDGSVVWVEAVEDIVNVKKRLMSLGSDDYRVWDSTTQQFIDVLNDIA
Ga0209329_10370722	3300027605	Forest Soil	MVAKYDIFKKTNDSVVWVEAVEDIVTAKKRLISLASDGTDGYRIWDSTRQQFIDLLDDCA
Ga0209693_101731971	3300027855	Soil	VVAKYDIFKKTGASVLWVEAVEDIVTVKKRLISLASQGTDDYRVWDSTRQQFIDVLDDRA
Ga0209693_105329741	3300027855	Soil	MVAKYDSFKKTDGSVLWVEAVEDIVKVKERLISLASQGTDDYRVWDSTREQFIDVLDDCA
Ga0209380_100471022	3300027889	Soil	MVAKYDIFRKTNDSVVWVEAVEDIVTAKKRLISLASVGTDNYRIWDSSRQQFIDLLDDCA
Ga0209526_100280804	3300028047	Forest Soil	MVAKYDIFKKINESILRVEAVEDIVTLKKRLMGLASTGTDDYRVWDSTQQKFIDPLDDCA
Ga0308309_100698241	3300028906	Soil	MLSPAGGSMVAKYDIFKKTDGSVLWVEAVEDIVEVKKRLMSLASQGRDDYRVWDSTRQQFIDVLDDRA
Ga0308309_102345801	3300028906	Soil	MALYAPPQHLSWLEVFMAAKYDIFKKTNDSVIWVEAVEDIVAVKKRLISLGSVDEYRVWDSTEQRFVDVLDDCA
Ga0265753_10020461	3300030862	Soil	MVAKYDIFKKTDGSVLWVEAVEDIVEVKRRLISLASQGTDDYRVWDSTREQFIDVLDDCA
Ga0170834_1054183612	3300031057	Forest Soil	MVAKYDIFKKTNNSVVWVEAVEDIVTAKKRLISLAAGGTDSYRIWDSTTQQFIDLLDDCA
Ga0170834_1073175601	3300031057	Forest Soil	MVAKYDIFKKTNNSVVWVEAVEDIVAVKKRLISVASDGKNDYRVWDSTREQFIDVLDDCA
Ga0170823_103088261	3300031128	Forest Soil	MPLQYDIFKKTKNSVVWVEAVEDIVTAKKRLISLASGGTDDYRIWDSSKQQFIDQLDDCA
Ga0170823_158588791	3300031128	Forest Soil	MVVKYDIFKKTNNSVVWVEAVEDIVTAKKRLISLAADGTDSYRIWDSTTQQFIDLLDDCA
Ga0170824_1175933432	3300031231	Forest Soil	MVPKYDIFKKTGKSVVWVEAVEDMVTVKKRLLSLGLREKNDYCVWDSAQQQFIDVLDDCA
Ga0170824_1228404972	3300031231	Forest Soil	LVPKYDIFKKTGKSVVWVEAVEDIVAVKKRLLSLGLREPDDYRVWDSTREQFIDVLEDCA
Ga0170824_1233822631	3300031231	Forest Soil	MIPKHDIFKKTNNFCVWMEAVEDIVTAKKRLVSLASDGTDDYRIWDSTRQQFIDQLDDCA
Ga0170818_1095771181	3300031474	Forest Soil	MVPKYDIFKKTGKSVVWVEAVEDMVTVKKRLLSLGLREKDDYCVWDSTQQQFIDVLDDCA
Ga0310915_105513801	3300031573	Soil	MTIIPKYDIFRKTNGSVVWVEAVEDIFTAKKRLISLSSNGREEYRIWDSSKEQFVDLDDC
Ga0310686_1008540876	3300031708	Soil	MVARYDIFKETDGSVLWVEAVEDIVKVKKRLISLASQGADDYRVWDSTRQQFIELLDDRA
Ga0307476_103388491	3300031715	Hardwood Forest Soil	MVLKYDIFKKTKNSVVWVEAVEDIVTAKKRLISLASGRTDDYQIWDSSKQQFIDQLDDCA
Ga0307476_107033851	3300031715	Hardwood Forest Soil	MVAKYDIFKTTNGSVVWVEAVEDIVTAKKRLISLASDGTDGYRIWDSTRQQFIDLMEDCA
Ga0307476_108897392	3300031715	Hardwood Forest Soil	MVAKYDIFKKTDGSVLWVEAVEDIVEVKKRLISLATQGTDDYRVWDSTRQQFIDVLDNRA
Ga0307476_113051733	3300031715	Hardwood Forest Soil	PAGGSMVAKYDIFKKTDGSVLWVEAVEDIVKVKERLISLASQGTDDYRVWDSTRQQFIDVLDDCA
Ga0307474_100474553	3300031718	Hardwood Forest Soil	MTLKYDIFKKTSDSVIWVEAVEDIVAAKKRLISLGSADDYRIWDSAKQQFVDLMDDCA
Ga0307474_100645834	3300031718	Hardwood Forest Soil	MVAKYDIFKKTDGSVLWVEAVEDIVEVKKRLISLATQGTDDYRVWDSTRQQFIDVLDDRA
Ga0307474_104705832	3300031718	Hardwood Forest Soil	KKINESILWVEAVEDIVTLKKRLTGLASNGTDDYRVWDSTQQKFIDPLNDCA
Ga0307469_105805581	3300031720	Hardwood Forest Soil	MVLKYDIFKKTKNSVVWVEAVEDIVTAKKRLISLAPGRTDDYRIWDSSKQQFIDQLDDCA
Ga0307477_101388971	3300031753	Hardwood Forest Soil	FGGFRLVAKYDIFRKTNDSVVWVEAVGDIVAVKNRLISLGSADEYRIWDSTEQRFVDVLDDCA
Ga0307477_101591731	3300031753	Hardwood Forest Soil	TIVKEWHPVPSSKIPAGGSMVAKYDIFKKTDGSVLWVEAVEDIVKVKERLISLASQRTDDYRVWDSTRQQFIDVLDDCA
Ga0307477_105135332	3300031753	Hardwood Forest Soil	MVAKYDIFKKTGASVLWVEAVEDIVTVKKRLISLASQGTDDYRVWDSTRQQFIDVLDDRA
Ga0307475_100350558	3300031754	Hardwood Forest Soil	SKIPAGGSMVAKYDIFKKTDGSVLWVEAVEDIVKVKERLISLASQGTDDYRVWDSTRQQFIDVLDDCA
Ga0307475_102842351	3300031754	Hardwood Forest Soil	PMIARYDIFKKQDNSVVWVETAQDIVAAKKLLKSLASDGTDEYRIWDSTREQFIDVLEDC
Ga0307475_104817562	3300031754	Hardwood Forest Soil	MTAKYDIFKKINESILWVEAVEDIVTLKKRRTGLASTGTDDYRVWDSTQQKFIDPLDDCA
Ga0307475_105259111	3300031754	Hardwood Forest Soil	KTDRSVVWVEAVEDIVTAKKRLISLTSNGTDGYRIWDSTKEQFIDLLDDCA
Ga0307475_110544622	3300031754	Hardwood Forest Soil	MVVKYDIFKKTDGSVVWVEAVEDIVTAKKRLISLASDGTDGYRIWDSTKEQFIDLLDDCA
Ga0307475_115592081	3300031754	Hardwood Forest Soil	IFKKINESILWVEAVDDIVTLKKRLTGLASTGTNDYRVWDSTQQKFIDPLDDCA
Ga0307473_110799361	3300031820	Hardwood Forest Soil	KKTENSVVWVEAVEDIVTAKNRLISLASGRTADYRIWDSSKQQFIDQLDDCA
Ga0307478_101036764	3300031823	Hardwood Forest Soil	MTAKYDIFKKINESILWVEAVEDIVTLKKRLTGLASTGTDDYRVWDSTQQKFIDPLDDCA
Ga0307478_102979663	3300031823	Hardwood Forest Soil	MVVKYDIFKKTDGSVVWVEAVEDIVTAKKRLINLASDGTDGYRIWDSTKEQFIDLLDDCA
Ga0307478_103548222	3300031823	Hardwood Forest Soil	KTNDSVVWVEAVEDIVAVKKRLIILGAADEYRVWDSTEQRFVDVLDDCA
Ga0307478_110366291	3300031823	Hardwood Forest Soil	KRDGILLVSSNILRPAGGSMVAKYDIFKKTDGSVLWVEAVEDIVKVKERLISLASQRTDDYRVWDSTRQQFIDVLDDCA
Ga0307478_116189612	3300031823	Hardwood Forest Soil	MTLKYDIFKKTSDSVIWVEAVEDIVAAKKRLISLGSADDYRIWDSAKQQFVDHKR
Ga0310917_100703681	3300031833	Soil	SMTIIPKYDIFRKTNGSVVWVEAVEDIFTAKKRLISLSSNGREEYRIWDSSKEQFVDLDDCA
Ga0307479_1001223010	3300031962	Hardwood Forest Soil	MVAKYDIFKKTDGSVLWVEAVEDIVKVKERLISLASQRTDDYRVWDSTRQQFIDVLDDCA
Ga0307479_105712033	3300031962	Hardwood Forest Soil	MVAKYDIFKKINESILWVEAVEDIVTLKKRLTGLASTGTDDYRVWDSTQQKFIDPLDD
Ga0318553_106494121	3300032068	Soil	MTIIPKYDIFRKTNGSVVWVEAVEDIFTAKKRLISLSSNGREEYRIWDSSKEQFV
Ga0307470_101091162	3300032174	Hardwood Forest Soil	MVLKYDIFKKTKNSVVWVEAVEDIVTAKKRLISLASGRTNDYRIWDSSKQQFIDQLDDCA
Ga0307471_1000472201	3300032180	Hardwood Forest Soil	MVAKYDIFKKTNNSVVWVEAVEDIVTAKKRLMSLASDGTDGYRIWDSTKQQFIDLLDDCA
Ga0307471_1016313633	3300032180	Hardwood Forest Soil	MVAKYDIFKKINESILWVEAVEDIVTLKKRLTGLASTGTDDYRVWDSTQQKFIDPLNDCA
Ga0307472_1004796301	3300032205	Hardwood Forest Soil	LDNTFRRDRRFLMVAKYDIFKKINESILWVEAVEDIVTLKKRLTGLASTGTDDYRVWDSTQQKFIDPLDDCA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061096

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences