Metagenome / Metatranscriptome Family F061111

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F061111
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	85 residues
Representative Sequence	FKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVLSHYHKHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVSQST
Number of Associated Samples	80
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.76 %
% of genes near scaffold ends (potentially truncated)	98.48 %
% of genes from short scaffolds (< 2000 bps)	91.67 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (68.182 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (32.576 % of family members)
Environment Ontology (ENVO)	Unclassified (56.818 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.636 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.49% β-sheet: 19.51% Coil/Unstructured: 50.00%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF00589	Phage_integrase	25.00
PF13827	DUF4189	1.52
PF01636	APH	1.52
PF03401	TctC	0.76
PF00027	cNMP_binding	0.76
PF13493	DUF4118	0.76
PF02586	SRAP	0.76
PF01425	Amidase	0.76
PF13358	DDE_3	0.76
PF11272	DUF3072	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.76
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.76
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.18 %
Unclassified	root	N/A	31.82 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.18 %
Unclassified	root	N/A	31.82 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.18 %
Unclassified	root	N/A	31.82 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	67.42 %
Unclassified	root	N/A	31.82 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	65.91 %
Unclassified	root	N/A	31.82 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	61.36 %
Unclassified	root	N/A	31.82 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.52 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.76 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	61.36 %
Unclassified	root	N/A	31.82 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.76 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.76 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.76 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	61.36 %
Unclassified	root	N/A	31.82 %
Acidocella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidocella	0.76 %
Azorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium	0.76 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.76 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	61.36 %
Unclassified	root	N/A	31.82 %
unclassified Azorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → unclassified Azorhizobium	0.76 %
unclassified Acidocella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidocella → unclassified Acidocella	0.76 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.76 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	61.36 %
Unclassified	root	N/A	31.82 %
Azorhizobium sp. 35-67-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → unclassified Azorhizobium → Azorhizobium sp. 35-67-5	0.76 %
Acidocella sp. MX-AZ02	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidocella → unclassified Acidocella → Acidocella sp. MX-AZ02	0.76 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.76 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004152\|Ga0062386_100145811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1845	Open in IMG/M
3300004633\|Ga0066395_10358146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	812	Open in IMG/M
3300005332\|Ga0066388_101565182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1157	Open in IMG/M
3300005332\|Ga0066388_103309578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	823	Open in IMG/M
3300005332\|Ga0066388_107145201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	561	Open in IMG/M
3300005468\|Ga0070707_101717257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	595	Open in IMG/M
3300005556\|Ga0066707_10940602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	528	Open in IMG/M
3300005764\|Ga0066903_102089018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1090	Open in IMG/M
3300005764\|Ga0066903_102792984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	947	Open in IMG/M
3300005764\|Ga0066903_103200299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	885	Open in IMG/M
3300006052\|Ga0075029_100916554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	601	Open in IMG/M
3300006086\|Ga0075019_10087022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidocella → unclassified Acidocella → Acidocella sp. MX-AZ02	1785	Open in IMG/M
3300006175\|Ga0070712_101497867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	589	Open in IMG/M
3300006804\|Ga0079221_11345717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	564	Open in IMG/M
3300009012\|Ga0066710_104897640	Not Available	501	Open in IMG/M
3300009792\|Ga0126374_10069628	All Organisms → cellular organisms → Bacteria → Proteobacteria	1876	Open in IMG/M
3300009792\|Ga0126374_10097457	Not Available	1658	Open in IMG/M
3300010048\|Ga0126373_10567628	Not Available	1184	Open in IMG/M
3300010048\|Ga0126373_11501883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	739	Open in IMG/M
3300010048\|Ga0126373_11543842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	729	Open in IMG/M
3300010358\|Ga0126370_10023080	Not Available	3616	Open in IMG/M
3300010358\|Ga0126370_11628983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	618	Open in IMG/M
3300010359\|Ga0126376_10504003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1121	Open in IMG/M
3300010359\|Ga0126376_11663090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	672	Open in IMG/M
3300010360\|Ga0126372_10024060	Not Available	3667	Open in IMG/M
3300010360\|Ga0126372_10915494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	881	Open in IMG/M
3300010361\|Ga0126378_10974372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	952	Open in IMG/M
3300010361\|Ga0126378_12204402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	629	Open in IMG/M
3300010361\|Ga0126378_12836232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	553	Open in IMG/M
3300010361\|Ga0126378_13220564	Not Available	519	Open in IMG/M
3300010366\|Ga0126379_10012963	Not Available	5952	Open in IMG/M
3300010366\|Ga0126379_12424169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	624	Open in IMG/M
3300010376\|Ga0126381_102588452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	726	Open in IMG/M
3300010376\|Ga0126381_105128683	Not Available	501	Open in IMG/M
3300010398\|Ga0126383_10249112	Not Available	1742	Open in IMG/M
3300012971\|Ga0126369_10930616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	955	Open in IMG/M
3300012971\|Ga0126369_11628571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	735	Open in IMG/M
3300016270\|Ga0182036_10817890	Not Available	760	Open in IMG/M
3300016270\|Ga0182036_11158475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	642	Open in IMG/M
3300016294\|Ga0182041_10256768	Not Available	1426	Open in IMG/M
3300016319\|Ga0182033_11740643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	565	Open in IMG/M
3300016341\|Ga0182035_10486150	Not Available	1052	Open in IMG/M
3300016341\|Ga0182035_10543455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	997	Open in IMG/M
3300016357\|Ga0182032_10344952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1190	Open in IMG/M
3300016357\|Ga0182032_10954072	Not Available	731	Open in IMG/M
3300016357\|Ga0182032_11106984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	679	Open in IMG/M
3300016357\|Ga0182032_11728867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	546	Open in IMG/M
3300016371\|Ga0182034_10244577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1412	Open in IMG/M
3300016371\|Ga0182034_11146486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	675	Open in IMG/M
3300016371\|Ga0182034_11431400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	605	Open in IMG/M
3300016387\|Ga0182040_11545784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	564	Open in IMG/M
3300016404\|Ga0182037_10088739	Not Available	2193	Open in IMG/M
3300016404\|Ga0182037_11203638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	666	Open in IMG/M
3300016422\|Ga0182039_10763956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	856	Open in IMG/M
3300016422\|Ga0182039_11227303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	678	Open in IMG/M
3300016445\|Ga0182038_10123879	Not Available	1926	Open in IMG/M
3300016445\|Ga0182038_11388509	Not Available	629	Open in IMG/M
3300016445\|Ga0182038_12077918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	515	Open in IMG/M
3300017822\|Ga0187802_10129310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → unclassified Azorhizobium → Azorhizobium sp. 35-67-5	959	Open in IMG/M
3300017966\|Ga0187776_10418045	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300017974\|Ga0187777_11026052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	598	Open in IMG/M
3300017994\|Ga0187822_10070269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1021	Open in IMG/M
3300017995\|Ga0187816_10349468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	653	Open in IMG/M
3300017995\|Ga0187816_10506959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	544	Open in IMG/M
3300021560\|Ga0126371_10060661	Not Available	3648	Open in IMG/M
3300021560\|Ga0126371_10072090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3363	Open in IMG/M
3300021560\|Ga0126371_11375230	Not Available	837	Open in IMG/M
3300021560\|Ga0126371_12138430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	675	Open in IMG/M
3300021560\|Ga0126371_12235592	Not Available	660	Open in IMG/M
3300021560\|Ga0126371_12600581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	613	Open in IMG/M
3300027898\|Ga0209067_10973834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	501	Open in IMG/M
3300030969\|Ga0075394_10042346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	506	Open in IMG/M
3300031057\|Ga0170834_111832247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	528	Open in IMG/M
3300031231\|Ga0170824_114535076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	829	Open in IMG/M
3300031543\|Ga0318516_10576493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	643	Open in IMG/M
3300031564\|Ga0318573_10766964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300031572\|Ga0318515_10186161	Not Available	1111	Open in IMG/M
3300031640\|Ga0318555_10077732	Not Available	1725	Open in IMG/M
3300031719\|Ga0306917_10084153	Not Available	2242	Open in IMG/M
3300031719\|Ga0306917_10538195	Not Available	918	Open in IMG/M
3300031723\|Ga0318493_10431289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	723	Open in IMG/M
3300031723\|Ga0318493_10535985	Not Available	649	Open in IMG/M
3300031724\|Ga0318500_10069725	Not Available	1541	Open in IMG/M
3300031744\|Ga0306918_10457681	Not Available	997	Open in IMG/M
3300031747\|Ga0318502_10199254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1158	Open in IMG/M
3300031747\|Ga0318502_10354499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	868	Open in IMG/M
3300031748\|Ga0318492_10442222	Not Available	686	Open in IMG/M
3300031753\|Ga0307477_11138830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	508	Open in IMG/M
3300031754\|Ga0307475_11544256	Not Available	508	Open in IMG/M
3300031763\|Ga0318537_10020313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2307	Open in IMG/M
3300031771\|Ga0318546_10753352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	685	Open in IMG/M
3300031777\|Ga0318543_10069106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1477	Open in IMG/M
3300031777\|Ga0318543_10295869	Not Available	724	Open in IMG/M
3300031797\|Ga0318550_10262779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	837	Open in IMG/M
3300031805\|Ga0318497_10005110	Not Available	5673	Open in IMG/M
3300031823\|Ga0307478_11760182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	510	Open in IMG/M
3300031833\|Ga0310917_10126778	Not Available	1667	Open in IMG/M
3300031833\|Ga0310917_10147267	Not Available	1551	Open in IMG/M
3300031845\|Ga0318511_10225117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	838	Open in IMG/M
3300031879\|Ga0306919_10305303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1208	Open in IMG/M
3300031879\|Ga0306919_10410540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1039	Open in IMG/M
3300031879\|Ga0306919_10554567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	887	Open in IMG/M
3300031879\|Ga0306919_10626537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	829	Open in IMG/M
3300031879\|Ga0306919_11158120	Not Available	588	Open in IMG/M
3300031893\|Ga0318536_10095271	Not Available	1487	Open in IMG/M
3300031894\|Ga0318522_10307212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	601	Open in IMG/M
3300031897\|Ga0318520_10022956	Not Available	3007	Open in IMG/M
3300031897\|Ga0318520_10852456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	573	Open in IMG/M
3300031910\|Ga0306923_10985572	Not Available	917	Open in IMG/M
3300031912\|Ga0306921_10428674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1542	Open in IMG/M
3300031912\|Ga0306921_10679992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1184	Open in IMG/M
3300031942\|Ga0310916_11492608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	551	Open in IMG/M
3300031954\|Ga0306926_10458764	Not Available	1569	Open in IMG/M
3300031954\|Ga0306926_11640242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	736	Open in IMG/M
3300032001\|Ga0306922_10094301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3158	Open in IMG/M
3300032001\|Ga0306922_10665793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1098	Open in IMG/M
3300032010\|Ga0318569_10354645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	684	Open in IMG/M
3300032035\|Ga0310911_10312197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	905	Open in IMG/M
3300032042\|Ga0318545_10100723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1012	Open in IMG/M
3300032051\|Ga0318532_10211069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	689	Open in IMG/M
3300032059\|Ga0318533_10416091	Not Available	982	Open in IMG/M
3300032059\|Ga0318533_10838570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	674	Open in IMG/M
3300032063\|Ga0318504_10209998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	910	Open in IMG/M
3300032076\|Ga0306924_10287384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1888	Open in IMG/M
3300032076\|Ga0306924_10630462	Not Available	1210	Open in IMG/M
3300032076\|Ga0306924_10688085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1149	Open in IMG/M
3300032076\|Ga0306924_11814211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	635	Open in IMG/M
3300032180\|Ga0307471_101922791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	740	Open in IMG/M
3300032261\|Ga0306920_100432479	All Organisms → cellular organisms → Bacteria → Proteobacteria	1956	Open in IMG/M
3300032261\|Ga0306920_100547267	Not Available	1715	Open in IMG/M
3300032261\|Ga0306920_100816202	Not Available	1368	Open in IMG/M
3300033289\|Ga0310914_10211014	Not Available	1736	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.94%
Aquatic	Environmental → Aquatic	6.06%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.94%
Freshwater	Environmental → Aquatic → Freshwater	3.79%
Sediment	Environmental → Aquatic → Sediment	2.27%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.61%
Loam	Environmental → Terrestrial → Soil → Loam	6.82%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.27%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.52%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	62.12%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.21%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.30%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.52%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.52%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.76%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	32.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	21.21%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.30%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.03%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.03%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.52%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.52%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.76%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300030969	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062386_1001458111	3300004152	Bog Forest Soil	VEERRIVESLAGNENLEIQWRLATLSEAKTVVSHYHKHVSENGLIKSVPELSASSFSVKRELSYRPTNGGSETVSHSP*
Ga0066395_103581461	3300004633	Tropical Forest Soil	NGADDQNKEQPGEFKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVLSHYHQHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVSQST*
Ga0066388_1015651822	3300005332	Tropical Forest Soil	EFKLLVEEWRVVESLAGNENSEIQWRLATLSEAKAVLSHYHQHLSEDGLITMPELSFPVKRELSYHPTNGGSKAVSQSTKAVSQST*
Ga0066388_1033095781	3300005332	Tropical Forest Soil	VESLAGNENLEIQWRLATLSEAKAVVSHYHKHLSENELIIPELSASSFSVKRELSYSRYRPTNGGSEAVLQSA*
Ga0066388_1071452011	3300005332	Tropical Forest Soil	LVEEWRVVESLAGNENLEIQWRLATLSEAKAVLSHYHEHLSENGLNKSPELSASSFSVKRELSYSRYRPTNGGSEAVSQST*
Ga0070707_1017172571	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MVESLTGNENLEIQWRLATLSEAKAVVSHYHKHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVSQPT*
Ga0066707_109406021	3300005556	Soil	TRLNGADDQNKERPGEFKLLVEEWRMVESLTGNENLEIQWRLATLSEAKAVVSHYHKHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVSQPT*
Ga0066903_1020890182	3300005764	Tropical Forest Soil	ENLEIQWRLATLSEAKTVVSHYHNHLSENGLVKSLPELSVSSFSVKRELSYHPTNGSPETVPQSP*
Ga0066903_1027929841	3300005764	Tropical Forest Soil	GNENLEIQWRLATLSEAKAVVSHYHKHLSENGLIKSPELSFSVKRELSYRPTNGGSEAVLQST*
Ga0066903_1032002993	3300005764	Tropical Forest Soil	LAGNENLEIQWRLATLSEAKAVVSHYHKHLSENELIKSIPELSASSFSAKPELSYRRYRPTNGGSEPVSQSA*
Ga0075029_1009165541	3300006052	Watersheds	EERRIVESLAGNENLEIQWRLATLSEAKTVVSHFHRYLSENELIKSIPELSAPSFSVKRELGYRPTNGGSETVSQSP*
Ga0075019_100870221	3300006086	Watersheds	NDQNNEQPGEFKLLVEERRIVESLAGNENLEIQWRLATLSEAKTVVSHFHRYLSENELIKSIPELSAPSFSVKRELGYRPTNGGSETVSQSP*
Ga0070712_1014978671	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	PGEFKLLVEEWRMVESLTGNENLEIQWRLATLSEAKAVVSHYHKHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVSQPT*
Ga0079221_113457171	3300006804	Agricultural Soil	EQPGEFKLLVEEWRMLESLTGNENLEIQWRLATLSEAKAVVSHYHKHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVSQSS*
Ga0066710_1048976401	3300009012	Grasslands Soil	NLEIQWRLATLSEAKAVLSHYHKHLSENGLIKSIPQLSASSFSAKRELSYRPTNGGSEAVSQPT
Ga0126374_100696281	3300009792	Tropical Forest Soil	LNGADDQNKEQPGEFKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVLSHYHQHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVSQST*
Ga0126374_100974571	3300009792	Tropical Forest Soil	LNGADDQNKEQPGEFKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVVSHYHKHLSENGLIKSPELSFSVKRELSYRPTNGGSEAVLQST*
Ga0126373_105676282	3300010048	Tropical Forest Soil	VESLAGNENLEIQWRLATLSEAKAVVSHYHKHLSENGLIKSPELSFSVKRELSYRPTNGGSEAVLQST*
Ga0126373_115018831	3300010048	Tropical Forest Soil	KEQPGEFKLLVEERRVVESVAGNENLEIQWRPATLSEAKTVVSRYHKYSAENGLFKSILELSASSLPAQRELGYRPTNGSTEADSLLAS*
Ga0126373_115438422	3300010048	Tropical Forest Soil	SKFKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVVSHYHKHLSENELIIPELSASSFSVKRELSYSRYRPTNGGSEAVLQST*
Ga0126370_100230801	3300010358	Tropical Forest Soil	EWRVVESLAGNENLEIQWRLATLSEAKAVVSHYHKHLSENGLIKSPELSFSVKRELSYRPTNGGSEAVLQST*
Ga0126370_116289831	3300010358	Tropical Forest Soil	EWRVVESLAGNENLEIQWRLATLSEAKAVVSHYHKHLSENELIIPELSASSFSVKRELSYSRYRPTNGGSEAVLQST*
Ga0126376_105040032	3300010359	Tropical Forest Soil	TRLNGADDQNKEQPGEFKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVLSHYHQHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVSQST*
Ga0126376_116630901	3300010359	Tropical Forest Soil	LLVEEWRVVESLAGNENLEIQWRLATLSEAKAVVSHYHKHLSENGLIKSPELSFSVKRELSYRPTNGGSEAVLQST*
Ga0126372_100240605	3300010360	Tropical Forest Soil	DDQNKEQPGEFKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVVSHYHKHLSENGLIKSPELSFSVKRELSYRPTNGGSEAVLQST*
Ga0126372_109154943	3300010360	Tropical Forest Soil	VEEWRVVESLAGNENLEIQWRLATLSEAKAVLSHYHQHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVSQST*
Ga0126378_109743723	3300010361	Tropical Forest Soil	KLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVLSHYHQHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVSQST*
Ga0126378_122044022	3300010361	Tropical Forest Soil	VDFTTRLNGADDQNKEQPGEFKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVLGHYHEHLSENGLIKSPELSASSFSVKRELSYSRYRPTNGGLEAVSQST*
Ga0126378_128362321	3300010361	Tropical Forest Soil	EWRVVESLAGNENLEIQWRLATLSEAKAVVSHYHKHLSENELIIPELSASSFSVKRELSYSRYRPTNGGSEAVLQSA*
Ga0126378_132205641	3300010361	Tropical Forest Soil	NLEIQWRLATLSEAKAVLSHYHQHLSENGLIKSIHELSASSFSVKRELSYRPTNGGSEAISQST*
Ga0126379_1001296310	3300010366	Tropical Forest Soil	GADDQNKEQPGEFKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVVSHYHKHLSENGLIKSPELSFSVKRELSYRPTNGGSEAVLQST*
Ga0126379_124241692	3300010366	Tropical Forest Soil	LNGANDQNKEQPGEFKLLVEERRVVESVAGNENLEIQWRPATLSEAKTVVSRYHKYSAENGLFKSILELSASSLPAQRELGYRPTNGSTEADSLLAS*
Ga0126381_1025884522	3300010376	Tropical Forest Soil	ENLEIQWRLATLSEAKAVVSHYHKHLSENGLIKFIPELSASSFSVKRELSYRPTNGGSEAVSQSA*
Ga0126381_1051286831	3300010376	Tropical Forest Soil	DDQNKEGVFKLLVEEWRVVESLAGNENPEIQWRLATLSEAKAVLSHYHQHLSENGLIKSIPELSASSFSVKRELSYRPSNGGSRAVSQST*
Ga0126383_102491124	3300010398	Tropical Forest Soil	ADDQNKEQPGEFKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVVSHYHKHLSENGLIKSPELSFSVKRELSYRPTNGGSEAVLQST*
Ga0126369_109306161	3300012971	Tropical Forest Soil	FKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVLSHYHQHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVSQST*
Ga0126369_116285711	3300012971	Tropical Forest Soil	VESLAGNENLEIQWRLATLSEAKAVVSHYHKHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVSQSA*
Ga0182036_108178901	3300016270	Soil	EWRVVESLAGNENLEIQWRLATLSEAKAVVSHYHKHLSENELIKSIPELSASSFSDKRELSYSRYRSTNGGSEAVSQST
Ga0182036_111584751	3300016270	Soil	LLVEEWRVVESLAGNENLEIQWRLATLSEAKAVVSHYHKHSSENGLIKSISELSASSFSVKRELSYHPTNGGSEAVSQST
Ga0182041_102567681	3300016294	Soil	KEQPGEFKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVVSHYHKHLSENGLIKSPELSAPSFSVKRELSYRPTNGGSEAVSQST
Ga0182033_117406432	3300016319	Soil	EEWRVVESLAGNENLEIQWRLATLSEAKAVVSHYHKHSSENGLIKSISELSASSFSVKRELSYHPTNGGSEAVSQST
Ga0182035_104861501	3300016341	Soil	NGADDQNKEQPGEFKLLVEEWRVVESLAGNENLEIQWRLGTLSEAKAVLSHYHEHLSENGLIKSPELSASSFSVKRKLSYRPTNGGSEAVSQST
Ga0182035_105434551	3300016341	Soil	KEQPGEFKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVLSHYHKHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVSQSN
Ga0182032_103449525	3300016357	Soil	LVEEWRVVESLAGNENLEIQWRLATLSEAKAVVSHYHKHSSENGLIKSISELSASSFSVKRELSYHPTNGGSEAVSQST
Ga0182032_109540721	3300016357	Soil	RVDFTTRLNGADDQNKEQPGEFKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVLSHYHEHLSENGLIKSPELSASSFSVKRKLSYRPTNGGSEAVSQST
Ga0182032_111069841	3300016357	Soil	NKEQPGEFKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVVSHYHKHLSENELIKSIPELSASSFSDKRELSYSRYRSTNGGSEAVSQST
Ga0182032_117288671	3300016357	Soil	GEFKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVVSHYHKHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVLQST
Ga0182034_102445771	3300016371	Soil	RVVESLAGNENLEIQWRLATLSEAKAVVSHYHKHSSENGLIKSISELSASSFSVKRELSYHPTNGGSEAVSQST
Ga0182034_111464862	3300016371	Soil	WLPTGRVDFTTRLNGADDQNKEQPGEFKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVLGHYHEHLSENGLIKSPELSASSFSVKRELSYSRYRPTNGGLEAVSQST
Ga0182034_114314001	3300016371	Soil	LVEEWRVVESLAGNENLEIQWRLATLSEAKAVVSHYHKHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVLQST
Ga0182040_115457841	3300016387	Soil	FKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVVSHYHKHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVLQST
Ga0182037_100887391	3300016404	Soil	VVESLAGNENLEIQWRLATLSEAKAVVSHYHKHLSENGLIKSPELSAPSFSVKRELSYRPTNGGSEAVSQST
Ga0182037_112036383	3300016404	Soil	WRVVESLAGNENLEIQWRLATLSEAKAVVSHYHKHSSENGLIKSISELSASSFSVKRELSYHPTNGGSEAVSQST
Ga0182039_107639561	3300016422	Soil	VVESLAGNENLEIQWRLATLSEAKAVVSHYHKHSSENGLIKSISELSASSFSVKRELSYHPTNGGSEAVSQST
Ga0182039_112273032	3300016422	Soil	WRVVESLAGNENLEIQWRLATLSEAKAVLSHYHKHLSENGLLKSTPELSASSFSAKPELSYSRYRPTNGGSEAVSQSA
Ga0182038_101238791	3300016445	Soil	RLNGADDQNKEQPGEFKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVVSHYHKHLSENGLIKSPELSAPSFSVKRELSYRPTNGGSEAVSQST
Ga0182038_113885091	3300016445	Soil	SLAGNENLEIQWRLATLSEAKAVLSHYHKHLCENGLLKSMPELSASSFSVKRELSYRPTNGGSEAVSQST
Ga0182038_120779182	3300016445	Soil	PGGVVKRDWLPTGRVDFTTRLNGADDQNKEQPGEFKLLVEDWRVVESLAGNENLEIQWRLATLSEAKAVLSHYHEHLSENGLIKSPELSASSFSVKRELSYSRYRPTNGGLEAVSQST
Ga0187802_101293102	3300017822	Freshwater Sediment	EQPGEFKLLVEERRIVESLAGNENLEIQWRLATLSEAKTVVSHFHRYLSENELIKSIPELSAPSFSVKRELGYRPTNGGSETVSQSP
Ga0187776_104180452	3300017966	Tropical Peatland	RLVESLAGNENLEIQWRPATLSEAKTVVSRYHKYSSENGLFKSILELSAFSSSVQRELSYRPTNGSSEAGSLLAS
Ga0187777_110260521	3300017974	Tropical Peatland	RIDFTTRLNGADDQNKEQPGEFKLLVEERRIVESLAGNENLEIQWRPATLSEAKTVVSRYHKYSSENGLFKSILELSASSSSVQRELSYRPTNGSSEAGSLLAS
Ga0187822_100702691	3300017994	Freshwater Sediment	EQPGEFKLLVEERRIVESLAGNENLEIQWRLATLSEAKTVVSHFHRYLSENELIKSIPELSAPSFSVKRELGYRPTNGGSETVSHSP
Ga0187816_103494682	3300017995	Freshwater Sediment	VESLAGNENLEIQWRLATLSEAKTVVSHFHRYLSENELIKSIPELSAPSFSVKRELGYRPTNGGSETVSQSP
Ga0187816_105069592	3300017995	Freshwater Sediment	VESLAGNENLEIQWRLATLSEAKTVVSHFHRYLSENELIKSIPELSAPSFSVKRELGYRPTNGGSETVSHSP
Ga0126371_100606617	3300021560	Tropical Forest Soil	VESLAGNENLEIQWRLATLSEAKAVVSHYHKHLSENGLIKSPELSFSVKRELSYRPTNGGSEAVLQST
Ga0126371_100720904	3300021560	Tropical Forest Soil	VESLAGNENLEIQWRLATLSEAKAVVSHYHKHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVSQSA
Ga0126371_113752301	3300021560	Tropical Forest Soil	NLEIQWRLATLSEAKAVLSHYHQHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVSQST
Ga0126371_121384301	3300021560	Tropical Forest Soil	NGANDQNKEQPGEFKLLVEERRVVESVAGNENLEIQWRPATLSEAKTVVSRYHKYSAENGLFKSILELSASSLPAQRELGYRPTNGSTEADSLLAS
Ga0126371_122355922	3300021560	Tropical Forest Soil	VVESLAGNENLEIQWRLATLSEAKAVVSHYHKHLSENELIIPELSASSFSVKRELSYSRYRPTNGGSEAVLQSA
Ga0126371_126005811	3300021560	Tropical Forest Soil	NGANDQNKEQPGEFKLLVEERRVVESVAGNENLEIQWRPATLSEAKTVVSRYHKYSAENGLFKSILELSASSVPAQRELGYRPTNGSSEADSLLAS
Ga0209067_109738341	3300027898	Watersheds	LVEERRIVESLAGNENLEIQWRLATLSEAKTVVSHFHRYLSENELIKSIPELSAPSFSVKRELGYRPTNGGSETVSHSP
Ga0075394_100423461	3300030969	Soil	KKISPHGVVKRDWLPTGRVDFTTRLNGADDQNKERPGEFKLLVEEWRMVESLTGNENLEIQWRLATLSEAKAVVSHYHKHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVSQPT
Ga0170834_1118322471	3300031057	Forest Soil	RVDFTTRLNGADDQNKEQPGKFELLVEEWRMVESLTGNENLEIQWRLATLSEAKAVVSHYHKHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVSQPT
Ga0170824_1145350761	3300031231	Forest Soil	LTGNENLEIQWRLATLSEAKAVVSHYHKHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVSQPT
Ga0318516_105764933	3300031543	Soil	PGEFKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVLSHYHKHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVSQST
Ga0318573_107669641	3300031564	Soil	GEFKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVLSHYHKHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVSQST
Ga0318515_101861611	3300031572	Soil	WRVVESLAGNENPEIQWRLATLSEAKAVLSHYHQHLSENGLIKSIPELSASSFSVKRELSYRPSNGGSRAVSQST
Ga0318555_100777322	3300031640	Soil	LLVEEWRVVESLAGNENLEIQWRLATLSEAKAVVSHYHKHLSENGLIKSPELSAPSFSVKRELSYRPTNGGSEAVSQST
Ga0306917_100841534	3300031719	Soil	NKEQPGEFKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVVSHYHKHLSENGLIKSPELSAPSFSVKRELSYRPTNGGSEAVSQST
Ga0306917_105381951	3300031719	Soil	LVEEWRVVESVAGNENLEIQWRLATLSEAKAVLSHYHRHLSENELIIPELSASSFSVKRELSYSRYRPTNGGSEAVSQST
Ga0318493_104312892	3300031723	Soil	NGADDQNKEQPGEFKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVVSHYHKHLSENGLIKSPELSAPSFSVKRELSYRPTNGGSEAVSQST
Ga0318493_105359852	3300031723	Soil	GNENPEIQWRLATLSEAKAVLSHYHQHLSENGLIKSIPELSASSFSVKRELSYRPSNGGSRAVSQST
Ga0318500_100697251	3300031724	Soil	GEFKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVVSHYHKHLSENGLIKSPELSAPSFSVKRELSYRPTNGGSEAVSQST
Ga0306918_104576811	3300031744	Soil	DWLPTGRVDFTTRLNGADDQNKEQPGEFKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVLSHYHEHLSENGLIKSPELSASSFSVKRKLSYRPTNGGSEAVSQST
Ga0318502_101992541	3300031747	Soil	VEEWRVVESLAGNENLEIQWRLATLSEAKAVLSHYHEHLSGNGLIKSPELSASSFSVKRKLSYRPTNGGSEAVSQST
Ga0318502_103544991	3300031747	Soil	DDQNKEPPGEFKLLVEEWRVVESLAGNENPEIQWRLATLSEAKAVLSHYHQHLSENGLIKSIPELSASSFSVKRELSYRPSNGGSRAVSQST
Ga0318492_104422221	3300031748	Soil	VVESLAGNENPEIQWKLATLSEAKAVLSHYHQHLSENGLIKSIPELSASSFSVKRELSYRPSNGGSRAVSQST
Ga0307477_111388302	3300031753	Hardwood Forest Soil	GVVKRDWLPTGRVDFTTRLNGADHQNKEQPGEFKLLVEEWRMVESLTGNENLEIQWRLATLSEAKAVVSNHHKHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVSQST
Ga0307475_115442562	3300031754	Hardwood Forest Soil	RVVESLAGNENPEIQWRLATLSEAKAVLSHYHQHLSENGLIKSMPELSASSFSVKRELSYHPTNGGSKAVSQSTKAVSQST
Ga0318537_100203134	3300031763	Soil	SPGGVVKRDWLPTGRVDFTTRLNGADDQNKEQPGEFKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVVSHYHKHLSENGLIKSPELSAPSFSVKRELSYRPTNGGSEAVSQST
Ga0318546_107533522	3300031771	Soil	LVEEWRVVESLAGNENLEIQWRLATLSEAKAVLSHYHKHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVSQST
Ga0318543_100691062	3300031777	Soil	VVKRDWLPTGRVDFKTRLNGADDQNKEPPGEFKLLVEEWRVVESLAGNENPEIQWRLATLSEAKAVLSHYHQHLSENGLIKSIPELSASSFSVKRELSYRPSNGGSRAVSQST
Ga0318543_102958692	3300031777	Soil	LEIQWRLATLSEAKAVLSHYHKHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVSQST
Ga0318550_102627792	3300031797	Soil	DQYKEPPGEFKLLVEEWRVVESLAGNENPEIQWRLATLSEAKAVLSHYHQHLSENGLIKSIPELSASSFSVKRELSYRPSNGGSRAVSQST
Ga0318497_100051109	3300031805	Soil	VEEWRVVESLAGNENLEIQWRLATLSEAKAVLSHYHKHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVSQST
Ga0307478_117601821	3300031823	Hardwood Forest Soil	VDHQNKEQPGEFKLLVEEWRMVESLTGNENLEIQWRLATLSEAKAVVSHYHKHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVSQST
Ga0310917_101267786	3300031833	Soil	ENLEIQWRLATLSEAKAVVSHYHKHSSENGLIKSISELSASSFSVKRELSYHPTNGGSEAVSQST
Ga0310917_101472671	3300031833	Soil	FKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVLSHYHEHLSENGLIKSPELSASSFSVKRKLSYRPTNGGSEAVSQST
Ga0318511_102251171	3300031845	Soil	QNKEPPGEFKLLVEEWRVVESLAGNENPEIQWRLATLSEAKAVLSHYHQHLSENGLIKSIPELSASSFSVKRELSYRPSNGGSRAVSQST
Ga0306919_103053031	3300031879	Soil	NKEQPGEFKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVLSHYHKHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVSQST
Ga0306919_104105403	3300031879	Soil	EWRVVESLAGNENLEIQWRLATLSEAKAVVSHYHKHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVLQST
Ga0306919_105545671	3300031879	Soil	LNGANDQNKEQPGEFKLLVEERRVVESVAGNENLEIQWRPATLSEAKTVVSRYHKYSAENGLFKSILELSASSLPAQRELGYRPTNGSTEADSLLAS
Ga0306919_106265371	3300031879	Soil	ADFKTRLNGADDQNKEQPGEFKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVLSHYHEHLSENGLIKSPELSASSFSVKRKLSYRPTNGGSEAVSQST
Ga0306919_111581203	3300031879	Soil	NLEIQWRLATLSEAKAVVSHYHKHSSENGLIKSISELSASSFSVKRELSYHPTNGGSEAVSQST
Ga0318536_100952712	3300031893	Soil	GADDQNKEQPGEFKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVVSHYHKHLSENGLIKSPELSAPSFSVKRELSYRPTNGGSEAVSQST
Ga0318522_103072121	3300031894	Soil	KEQPGEFKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVLSHYHKHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVSQST
Ga0318520_100229566	3300031897	Soil	LPTGRVDFKTRLNGADDQNKEPPGEFKLLVEEWRVVESLAGNENPEIQWRLATLSEAKAVLSHYHQHLSENGLIKSIPELSASSFSVKRELSYRPSNGGSRAVSQST
Ga0318520_108524562	3300031897	Soil	EFKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVVSHYHKHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVLQST
Ga0306923_109855722	3300031910	Soil	VESLAGNENLEIQWRLATLSEAKAVLSHYHKHLSENGLLKSTPELSASSFSAKPELSYSRYRPTNGGSEAVSQSA
Ga0306921_104286742	3300031912	Soil	PGGVVKRDWLPTSRVDFTTRLNGADDQNKEQPGEFKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVLSHYHEHLSENGLIKSPELSASSFSVKRKLSYRPTNGGSEAVSQST
Ga0306921_106799923	3300031912	Soil	WRVVESLAGNENLEIQWRLATLSEAKAVVSHYHKHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVLQST
Ga0310916_114926081	3300031942	Soil	SKFKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVVSHYHKHLSENELIKSIPELSASSFSDKRELSYSRYRSTNGGSEAVSQST
Ga0306926_104587641	3300031954	Soil	TRLNGADDQNKEQPGEFKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVLSHYHEHLSENGLVKSPELSASSFSVKRKLSYRPTNGGSEAVSQST
Ga0306926_116402421	3300031954	Soil	KKISPGGVVKRDWLPTGRADFTTRLNGADDQNKEQPGEFKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVLSHYHQHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVSQST
Ga0306922_100943011	3300032001	Soil	VESLAGNENLEIQWRLATLSEAKAVVSHYHKHSSENGLIKSISELSASSFSVKRELSYHPTNGGSEAVSQST
Ga0306922_106657932	3300032001	Soil	LNGADDQNKEQPGEFKLLVEERRVVESVAGNENLEIQWRPATLSEAKTVISRYHKYSAENGLFKSILELSASSLPAQRELGYRPTNGSTEADSLLAS
Ga0318569_103546451	3300032010	Soil	EEWRVVESLAGNENLEIQWRLATLSEAKAVLSHYHKHLSENGLIKSIPELSASSFSVKRELSYSRYRPTNGGSEAVSQST
Ga0310911_103121971	3300032035	Soil	EEWRVVESLAGNENLEIQWRLATLSEAKAVLSHYHKHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVSQST
Ga0318545_101007232	3300032042	Soil	VESLAGNENLEIQWRLATLSEAKAVLSHYHKHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVSQST
Ga0318532_102110693	3300032051	Soil	FKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVLSHYHKHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVSQST
Ga0318533_104160912	3300032059	Soil	TRLNGADDQNKEQPGEFKLLVEEWRVVESLAGNENLEIQWRLGTLSEAKAVLSHYHEHLSENGLIKSPELSASSFSVKRKLSYRPTNGGSEAVSQST
Ga0318533_108385701	3300032059	Soil	QPGEFKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVLSHYHKHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVSQST
Ga0318504_102099981	3300032063	Soil	KEPPGEFKLLVEEWRVVESLAGNENPEIQWRLATLSEAKAVLSHYHQHLSENGLIKSIPELSASSFSVKRELSYRPSNGGSRAVSQST
Ga0306924_102873841	3300032076	Soil	WLPTGRVDFTTRLNGADDQNKEQPGEFKLLVEEWRVVESLAENENLEIQWRLATLSEAKAVLSHYHQHLSENGLIKSIPELSASSFSVKRELSYSRYRPTNGGSEAVSQST
Ga0306924_106304621	3300032076	Soil	NKEQPGEFKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVLSHYHEHLSENGLIKSPELSASSFSVKRKLSYRPTNGGSEAVSQST
Ga0306924_106880851	3300032076	Soil	KLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVVSHYHKHSSENGLIKSISELSASSFSVKRELSYHPTNGGSEAVSQST
Ga0306924_118142111	3300032076	Soil	RVVESLAGNENLEIQWRLATLSEAKAVVSHYHKHLSENELIKSIPELSASSFSDKRELSYSRYRSTNGGSEAVSQST
Ga0307471_1019227912	3300032180	Hardwood Forest Soil	GVDHQNKEQPGEFKLLVEEWRMVESLTGNENLEIQWRLATLSEAKAVVSHYHKHLSENGLIKSIPELSASSFSVKRELSYRPTNGGSEAVSQST
Ga0306920_1004324791	3300032261	Soil	EFKLLVEEWRVVESLAGNENLEIQWRLGTLSEAKAVLSHYHEHLSENGLIKSPELSASSFSVKRKLSYRPTNGGSEVASQST
Ga0306920_1005472671	3300032261	Soil	LPTSRVDFTTRLNGADDQNKEQPGEFKLLVEEWRVVESLAGNENLEIQWRLATLSEAKAVLSHYHEHLSENGLIKSPELSASSFSVKRKLSYRPTNGGSEAVSQST
Ga0306920_1008162021	3300032261	Soil	SVAGNENLEIQWRLATLSEAKAVLSHYHRHLSENELIIPELSASSFSVKRELSYSRYRPTNGGSEAVSQST
Ga0310914_102110143	3300033289	Soil	LVEEWRVVESLAGNENLEIQWRLATLSEAKAVLSHYHEHLSENGLIKSPELSASSFSVKRKLSYRPTNGGSEAVSQST

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061111

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences