Metagenome / Metatranscriptome Family F061124

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061124
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	63 residues
Representative Sequence	SVRAYEFPDRDPVAVSAAVDFPGSGVITALWTEAKGDTAIAVAKNRETGTYEAFRLAVVCSQ
Number of Associated Samples	117
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.76 %
% of genes near scaffold ends (potentially truncated)	99.24 %
% of genes from short scaffolds (< 2000 bps)	82.58 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.485 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.939 % of family members)
Environment Ontology (ENVO)	Unclassified (24.242 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.030 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 30.00% Coil/Unstructured: 70.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF00496	SBP_bac_5	87.12
PF02954	HTH_8	3.03
PF00672	HAMP	2.27
PF02518	HATPase_c	2.27
PF00848	Ring_hydroxyl_A	1.52

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG4638	Phenylpropionate dioxygenase or related ring-hydroxylating dioxygenase, large terminal subunit	Inorganic ion transport and metabolism [P]	3.03

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.48 %
Unclassified	root	N/A	1.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.48 %
Unclassified	root	N/A	1.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.48 %
Unclassified	root	N/A	1.52 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	75.76 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.52 %
Unclassified	root	N/A	1.52 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	16.67 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	12.12 %
Unclassified	root	N/A	1.52 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	14.39 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.12 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1.52 %
Unclassified	root	N/A	1.52 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	14.39 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.12 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	1.52 %
Unclassified	root	N/A	1.52 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	12.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.12 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1.52 %
Unclassified	root	N/A	1.52 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.12 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.58 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1.52 %
Unclassified	root	N/A	1.52 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309004\|prs_FHA1B5K04XT76Q	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
2199352024\|deeps__Contig_77128	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1340	Open in IMG/M
3300000789\|JGI1027J11758_12175561	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	551	Open in IMG/M
3300001356\|JGI12269J14319_10178214	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300001593\|JGI12635J15846_10423973	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	798	Open in IMG/M
3300001593\|JGI12635J15846_10756859	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300002245\|JGIcombinedJ26739_100572945	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1006	Open in IMG/M
3300002245\|JGIcombinedJ26739_100784039	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	833	Open in IMG/M
3300004082\|Ga0062384_101326159	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300004092\|Ga0062389_104263293	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	538	Open in IMG/M
3300004152\|Ga0062386_101469186	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300005176\|Ga0066679_10022895	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3339	Open in IMG/M
3300005184\|Ga0066671_10287876	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1026	Open in IMG/M
3300005434\|Ga0070709_10751881	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	762	Open in IMG/M
3300005439\|Ga0070711_100099530	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2112	Open in IMG/M
3300005556\|Ga0066707_10278058	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1095	Open in IMG/M
3300005591\|Ga0070761_10158978	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1326	Open in IMG/M
3300005602\|Ga0070762_10745102	All Organisms → cellular organisms → Bacteria → Acidobacteria	660	Open in IMG/M
3300005712\|Ga0070764_10126271	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1388	Open in IMG/M
3300005877\|Ga0075296_1028103	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300006059\|Ga0075017_100004851	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	8466	Open in IMG/M
3300006086\|Ga0075019_10914054	All Organisms → cellular organisms → Bacteria → Acidobacteria	563	Open in IMG/M
3300006175\|Ga0070712_100779666	All Organisms → cellular organisms → Bacteria → Acidobacteria	819	Open in IMG/M
3300006176\|Ga0070765_101490725	All Organisms → cellular organisms → Bacteria → Acidobacteria	637	Open in IMG/M
3300006354\|Ga0075021_11043060	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300009524\|Ga0116225_1409695	All Organisms → cellular organisms → Bacteria → Acidobacteria	603	Open in IMG/M
3300009525\|Ga0116220_10434911	All Organisms → cellular organisms → Bacteria → Acidobacteria	590	Open in IMG/M
3300009616\|Ga0116111_1030724	All Organisms → cellular organisms → Bacteria → Acidobacteria	1733	Open in IMG/M
3300009640\|Ga0116126_1005004	All Organisms → cellular organisms → Bacteria	6893	Open in IMG/M
3300009760\|Ga0116131_1118926	All Organisms → cellular organisms → Bacteria → Acidobacteria	778	Open in IMG/M
3300010361\|Ga0126378_10012288	All Organisms → cellular organisms → Bacteria → Proteobacteria	7078	Open in IMG/M
3300010361\|Ga0126378_10779752	Not Available	1066	Open in IMG/M
3300010376\|Ga0126381_102457212	All Organisms → cellular organisms → Bacteria → Acidobacteria	747	Open in IMG/M
3300010379\|Ga0136449_100022968	All Organisms → cellular organisms → Bacteria	15709	Open in IMG/M
3300012209\|Ga0137379_10176315	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2050	Open in IMG/M
3300012960\|Ga0164301_10657959	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300014164\|Ga0181532_10751855	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300014487\|Ga0182000_10581208	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300016404\|Ga0182037_10282701	All Organisms → cellular organisms → Bacteria → Acidobacteria	1326	Open in IMG/M
3300016404\|Ga0182037_10821991	All Organisms → cellular organisms → Bacteria → Acidobacteria	802	Open in IMG/M
3300017823\|Ga0187818_10154085	All Organisms → cellular organisms → Bacteria → Acidobacteria	1000	Open in IMG/M
3300017943\|Ga0187819_10032352	All Organisms → cellular organisms → Bacteria → Acidobacteria	3089	Open in IMG/M
3300017946\|Ga0187879_10068575	All Organisms → cellular organisms → Bacteria → Acidobacteria	2063	Open in IMG/M
3300017948\|Ga0187847_10661484	All Organisms → cellular organisms → Bacteria → Acidobacteria	586	Open in IMG/M
3300017994\|Ga0187822_10067709	All Organisms → cellular organisms → Bacteria → Acidobacteria	1036	Open in IMG/M
3300017995\|Ga0187816_10375793	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300017995\|Ga0187816_10404720	All Organisms → cellular organisms → Bacteria → Acidobacteria	607	Open in IMG/M
3300018003\|Ga0187876_1002986	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	11894	Open in IMG/M
3300018012\|Ga0187810_10419213	All Organisms → cellular organisms → Bacteria → Acidobacteria	564	Open in IMG/M
3300018042\|Ga0187871_10357895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	806	Open in IMG/M
3300018062\|Ga0187784_10853661	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300019887\|Ga0193729_1049104	All Organisms → cellular organisms → Bacteria → Acidobacteria	1718	Open in IMG/M
3300020579\|Ga0210407_10200532	All Organisms → cellular organisms → Bacteria → Acidobacteria	1550	Open in IMG/M
3300021170\|Ga0210400_11504189	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300021180\|Ga0210396_10045982	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4007	Open in IMG/M
3300021180\|Ga0210396_11193088	All Organisms → cellular organisms → Bacteria → Acidobacteria	637	Open in IMG/M
3300021181\|Ga0210388_10078927	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2790	Open in IMG/M
3300021402\|Ga0210385_10985730	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300021403\|Ga0210397_10911919	All Organisms → cellular organisms → Bacteria → Acidobacteria	680	Open in IMG/M
3300021404\|Ga0210389_10606423	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300021406\|Ga0210386_11291081	All Organisms → cellular organisms → Bacteria → Acidobacteria	615	Open in IMG/M
3300021406\|Ga0210386_11726572	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300021407\|Ga0210383_10238322	All Organisms → cellular organisms → Bacteria → Acidobacteria	1560	Open in IMG/M
3300021432\|Ga0210384_11261258	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300021433\|Ga0210391_11558493	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300021477\|Ga0210398_10360430	All Organisms → cellular organisms → Bacteria → Acidobacteria	1185	Open in IMG/M
3300021478\|Ga0210402_10349770	All Organisms → cellular organisms → Bacteria → Acidobacteria	1371	Open in IMG/M
3300021479\|Ga0210410_10035559	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4323	Open in IMG/M
3300021479\|Ga0210410_10197060	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1803	Open in IMG/M
3300021479\|Ga0210410_10271434	Not Available	1522	Open in IMG/M
3300021479\|Ga0210410_11471005	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300021559\|Ga0210409_10034133	All Organisms → cellular organisms → Bacteria → Acidobacteria	4868	Open in IMG/M
3300021560\|Ga0126371_10161551	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2311	Open in IMG/M
3300021860\|Ga0213851_1756264	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300021861\|Ga0213853_10871369	All Organisms → cellular organisms → Bacteria → Acidobacteria	3379	Open in IMG/M
3300022557\|Ga0212123_10137934	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1905	Open in IMG/M
3300022722\|Ga0242657_1021779	All Organisms → cellular organisms → Bacteria → Acidobacteria	1220	Open in IMG/M
3300022881\|Ga0224545_1039254	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300025439\|Ga0208323_1005050	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3894	Open in IMG/M
3300025576\|Ga0208820_1007742	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4071	Open in IMG/M
3300025612\|Ga0208691_1007819	All Organisms → cellular organisms → Bacteria → Acidobacteria	2852	Open in IMG/M
3300025812\|Ga0208457_1092472	All Organisms → cellular organisms → Bacteria → Acidobacteria	560	Open in IMG/M
3300025915\|Ga0207693_11042443	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300025916\|Ga0207663_10846806	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	730	Open in IMG/M
3300025928\|Ga0207700_11001330	All Organisms → cellular organisms → Bacteria → Acidobacteria	748	Open in IMG/M
3300026025\|Ga0208778_1029530	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300027334\|Ga0209529_1075221	All Organisms → cellular organisms → Bacteria → Acidobacteria	573	Open in IMG/M
3300027439\|Ga0209332_1054206	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300027667\|Ga0209009_1159192	All Organisms → cellular organisms → Bacteria → Acidobacteria	574	Open in IMG/M
3300027853\|Ga0209274_10148772	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1178	Open in IMG/M
3300027854\|Ga0209517_10012166	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	9199	Open in IMG/M
3300027854\|Ga0209517_10214979	All Organisms → cellular organisms → Bacteria → Acidobacteria	1175	Open in IMG/M
3300027855\|Ga0209693_10577063	All Organisms → cellular organisms → Bacteria → Acidobacteria	532	Open in IMG/M
3300027884\|Ga0209275_10874453	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300027895\|Ga0209624_10063674	All Organisms → cellular organisms → Bacteria → Acidobacteria	2372	Open in IMG/M
3300027895\|Ga0209624_10307045	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1057	Open in IMG/M
3300027898\|Ga0209067_10759125	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300028017\|Ga0265356_1011201	All Organisms → cellular organisms → Bacteria → Acidobacteria	995	Open in IMG/M
3300029910\|Ga0311369_11440668	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300029943\|Ga0311340_11431974	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300029951\|Ga0311371_11067234	All Organisms → cellular organisms → Bacteria → Acidobacteria	951	Open in IMG/M
3300029999\|Ga0311339_10152027	All Organisms → cellular organisms → Bacteria → Acidobacteria	2716	Open in IMG/M
3300029999\|Ga0311339_10252120	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1940	Open in IMG/M
3300030007\|Ga0311338_10861250	All Organisms → cellular organisms → Bacteria → Acidobacteria	895	Open in IMG/M
3300030056\|Ga0302181_10490310	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300030399\|Ga0311353_10564244	All Organisms → cellular organisms → Bacteria → Acidobacteria	1000	Open in IMG/M
3300030618\|Ga0311354_11041703	All Organisms → cellular organisms → Bacteria → Acidobacteria	751	Open in IMG/M
3300030707\|Ga0310038_10132406	All Organisms → cellular organisms → Bacteria → Acidobacteria	1261	Open in IMG/M
3300031090\|Ga0265760_10250627	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300031236\|Ga0302324_102411671	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300031249\|Ga0265339_10119045	All Organisms → cellular organisms → Bacteria → Acidobacteria	1359	Open in IMG/M
3300031525\|Ga0302326_10776035	All Organisms → cellular organisms → Bacteria → Acidobacteria	1386	Open in IMG/M
3300031573\|Ga0310915_10794148	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300031679\|Ga0318561_10084766	All Organisms → cellular organisms → Bacteria → Acidobacteria	1646	Open in IMG/M
3300031711\|Ga0265314_10216862	All Organisms → cellular organisms → Bacteria → Acidobacteria	1120	Open in IMG/M
3300031715\|Ga0307476_10289242	All Organisms → cellular organisms → Bacteria → Acidobacteria	1201	Open in IMG/M
3300031718\|Ga0307474_11042645	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300031718\|Ga0307474_11326319	All Organisms → cellular organisms → Bacteria → Acidobacteria	568	Open in IMG/M
3300031823\|Ga0307478_11343734	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300031846\|Ga0318512_10479204	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300031890\|Ga0306925_11761053	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300031954\|Ga0306926_12179663	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300031962\|Ga0307479_11043331	All Organisms → cellular organisms → Bacteria → Acidobacteria	785	Open in IMG/M
3300031962\|Ga0307479_11749650	All Organisms → cellular organisms → Bacteria → Acidobacteria	574	Open in IMG/M
3300031996\|Ga0308176_11531802	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300032001\|Ga0306922_10896621	All Organisms → cellular organisms → Bacteria → Acidobacteria	921	Open in IMG/M
3300032160\|Ga0311301_10447982	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1946	Open in IMG/M
3300032180\|Ga0307471_100343213	All Organisms → cellular organisms → Bacteria → Acidobacteria	1600	Open in IMG/M
3300033134\|Ga0335073_10203183	All Organisms → cellular organisms → Bacteria → Acidobacteria	2456	Open in IMG/M
3300033290\|Ga0318519_10416126	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300033547\|Ga0316212_1069363	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300033807\|Ga0314866_031711	All Organisms → cellular organisms → Bacteria → Acidobacteria	817	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.97%
Host-Associated	Host-Associated	3.03%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.76%
Aquatic	Environmental → Aquatic	21.21%
Plants	Host-Associated → Plants	3.03%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.67%
Freshwater	Environmental → Aquatic → Freshwater	17.42%
Peat	Environmental → Terrestrial → Peat	9.09%
Sediment	Environmental → Aquatic → Sediment	3.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.27%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.76%
Roots	Host-Associated → Plants → Roots	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.21%
Loam	Environmental → Terrestrial → Soil → Loam	16.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	15.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.09%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.03%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.27%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.52%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.76%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.03%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.12%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.09%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.06%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.30%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.55%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.03%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.27%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.52%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.76%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.76%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.76%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.94%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	8.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.82%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.06%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.30%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.30%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.30%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.55%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.79%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.03%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.03%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.27%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.52%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.52%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.76%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.76%
Green-Waste Compost	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Green-Waste Compost	0.76%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.76%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.76%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.76%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.76%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309004	Green-waste compost microbial communities at University of California, Davis, USA, from solid state bioreactor - Luquillo Rain Forest, Puerto Rico	Environmental	Open in IMG/M
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005877	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_404	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009760	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_100	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022881	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24	Environmental	Open in IMG/M
3300025439	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100 (SPAdes)	Environmental	Open in IMG/M
3300025576	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40 (SPAdes)	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300025812	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150 (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026025	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103 (SPAdes)	Environmental	Open in IMG/M
3300027334	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300028017	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4	Host-Associated	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033547	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1	Host-Associated	Open in IMG/M
3300033807	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_10	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
prs_05141110	2070309004	Green-Waste Compost	PDRDPVAVSAAVDFPGPVSALWTEARGDTAIAIVKDRDAGSYEAFRLSLACAQ
deeps_01267980	2199352024	Soil	WQVLATTSDEATNDVVRAYEFPERDPVAVSGSVELSGEMAALWTEEKGDTAMVIVKNQVTGDYEAFRLAMACNQ
JGI1027J11758_121755612	3300000789	Soil	RDPVAVSAAVEFPGPVSAMWTEARGDSAVAIGRNRDTGSYEAFRLSLACGQ*
JGI12269J14319_101782142	3300001356	Peatlands Soil	MRGHSVRAYEFPDRDPVTVSAALDVHGAITALWTEARGDTAIAVARNQESGSYEAFRLALVCSQ*
JGI12635J15846_104239732	3300001593	Forest Soil	PGDSVRAYELADRDPVPVSMAADFAGEITALWTEIKGDTAVAVVRNQRTGDYEAFRLAATCNQ*
JGI12635J15846_107568592	3300001593	Forest Soil	EETPGDRVRAYEFPDRDPVAVSVAVDFPGAGVVTALWTEAKGDTAIAVVKNRETGSYEAFRLAVVCSQ*
JGIcombinedJ26739_1005729452	3300002245	Forest Soil	ASLKTACGSGAQLMATSSAQNGPGSGTDSVRLYEIADRDPVPVSAVLDFPGEITALWREAKGDTAIAVVRNHETGEYEAFRLAVACSQ*
JGIcombinedJ26739_1007840391	3300002245	Forest Soil	VSDQAARIAWGSDVTSMRTACGAGWQVLAASSESSSEAGTGDSVRAYEFPDRDPVAVSAAIDFPGSMITALWTEAKADTAIAVVRNRENGSYEAFRLALVCSQ*
Ga0062384_1013261591	3300004082	Bog Forest Soil	DRDAAPASTALSFSGEITALWTEPKGDSVIAVVRNRESGEYEAFRLAVACSQ*
Ga0062389_1042632932	3300004092	Bog Forest Soil	EDSLRAYEIPDRDPVAVSASIDFSGTITALWTEAKADTAIAIVRNQETGSYEAFRLAVACSQ*
Ga0062386_1014691861	3300004152	Bog Forest Soil	VLATSSEATSGDAVRAYEFPDRDPVAVSTAVDFTGSDIAALWTEAKADTAIAVVRNRETGSYEAFRLVVSCNQ*
Ga0066679_100228953	3300005176	Soil	FPDRNAVPVSAAVDFPGEVTALWTEVKGDTAVAVTRNRETGNYEAFRLAMACPQ*
Ga0066671_102878761	3300005184	Soil	EFPDRDPVAVSAAIDFPGPITALWTESKGDTAIAVAKDRETGNYDAFRVAVACSQ*
Ga0070709_107518812	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	FEFPDREPIAVSPAIEFAGGVTALWTEAKGGSAIAVSRNAETGTYEAFRLAIACNQ*
Ga0070711_1000995303	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	EPIAVSPAIDFAGGVTALWTEAKGGSAIAVSRNAETGTYEAFRLAIACNQ*
Ga0066707_102780582	3300005556	Soil	FPDRDPVAVSAPIDLGGEVTTLWTEAKGDSAIAVVRNRETGSYEAFRLAIACNQ*
Ga0070761_101589781	3300005591	Soil	DIASLKTACGSGAQLMATSSAQNGPGSGTDSVRLYEIADRDPVPVSAVLDFPGEITALWREAKGDTAIAVVRNHETGEYEAFRLAVACSQ*
Ga0070762_107451021	3300005602	Soil	VAVSAALEFSGAITALWTEEKGDSAIAVVKNRGTGVYESFRVALACGQ*
Ga0070764_101262711	3300005712	Soil	VGVSPAVDFGGPITALWTEARGDTAIAVDRNRETGSYEAFRLAITCSQ*
Ga0075296_10281031	3300005877	Rice Paddy Soil	ASTEKDDSVRAYEFPDRDPVAVSAAVDLPGTLSELWTESSGDTAIGIVKNRETGNYEAFRLAMACN*
Ga0075017_1000048511	3300006059	Watersheds	RDPVAVSAAIDFPGAITALWTEAKGDAAIAVARNRETGSYEAFRLALACSQ*
Ga0075019_109140541	3300006086	Watersheds	WQVLATTSESGSEAGTGDSVRAYEFPDRDPVAVSAALDFPGGMITALWTEAKADTAIAVVRNRENGSYEAFRLALVCSQ*
Ga0070712_1007796661	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	SGEGSGGDEVRAYEFPDRDPIAVTASIDFAGAITALWTETKGETAIAVVRNRNTGNYEAFRLAISCSQ*
Ga0070765_1014907252	3300006176	Soil	AVSAAIDLPGEVTALWTEAKGDAAIAVARNRETGSYEAFQLALACGQ*
Ga0075021_110430602	3300006354	Watersheds	AYELPDRDPAPVSQAVDFAGGVTALWTEAKGSTAVAVSRNAETGNYEAFRLAIACGQ*
Ga0116225_14096952	3300009524	Peatlands Soil	GAGWQVLATSSEEGSADSVRAYEFPDRDAVAVSAAIDFPGAGVIAALWAEAKGDAAVAVVRNRETGSYEAFRLAVACSQ*
Ga0116220_104349112	3300009525	Peatlands Soil	AYELADRDPVPVTAPLDFSGEITGLWTEAKGDSAIAIVRNRETGAYEAFRLAVACN*
Ga0116111_10307243	3300009616	Peatland	EASAEEGAGDSVRAYEFPDRDPVAVSTAIDFPGSITTLWTEAKADTAIAVAKNRETGNYEAFRLAVVCSQ*
Ga0116126_10050046	3300009640	Peatland	AADSVRAYEFPDRDPVAVSAPIDLPGAITALWTEARGDTAVVVVRDQEAGSYASFRLAVACSQ*
Ga0116131_11189261	3300009760	Peatland	NSGADSVRAYEIADRAPVPVSAALDFPGEITALWTEAKGDSAVAVVRNRETGAYEAFRLAAACSQ*
Ga0126378_100122881	3300010361	Tropical Forest Soil	DTMRAYEFPDRDPVAVSPAVDLPGMISALWTESKGDSAIAVVNNRELGIYEAYRLAVSCSQ*
Ga0126378_107797521	3300010361	Tropical Forest Soil	AAVTPAVDMPGKVSALWTESKGDSAIAIVNNRETGSYEAYRVAVACSQ*
Ga0126381_1024572122	3300010376	Tropical Forest Soil	GQGEDSVRAYEFPDRDPVGVSATVEFPGPITALWTEARGDTAIAIAKNLQTGNYEAFRMAVACSQ*
Ga0136449_1000229681	3300010379	Peatlands Soil	EANGDWVRAFEFPDRDPVAVSGPVDFSGGVITALWTEAKGDTAIAVVRNRETGNYDAFRLAVACSQ*
Ga0137379_101763151	3300012209	Vadose Zone Soil	EGNEDSVRAYELPDRDPVAVSAAVDFTGGVTALWTEGKGDAAIAVVRNRETGSYEAFRLAVACSQ*
Ga0164301_106579591	3300012960	Soil	GDNSGDSVRAFEFPDRDPVAVSPALDFSGGITALWTEAKGGSAIAVSHNEETGNYEAFRLAMACGQ*
Ga0181532_107518552	3300014164	Bog	CESGWQVLATGTAENGMDTIRAYEIADRDPVPVSAALDFSGEITALWAEAKGDGAIAVVRDRETGDYEALRVAVACSQ*
Ga0182000_105812082	3300014487	Soil	AEKNDSVRAYEFPDRDPVAVSAPVDLPGTISALWTEAGGDGAIAIVTNRETGGYEAFRLAVACN*
Ga0182037_102827012	3300016404	Soil	GWQLLATSGGDNATDSVQAYEFPDRDPVAVSPAVDFPGGITALWSDSAGTTALAVARNTETGNYEAYRLAVVCGQ
Ga0182037_108219911	3300016404	Soil	SLRAYEFPDRDAVAVSAPSDLPGAISALWTEARGDTAIVIVKNRETGGYEAYRMEVACSQ
Ga0187818_101540852	3300017823	Freshwater Sediment	SVRAYEVGDRDPVAVSAPLDFSGEITALWTEGKGDSAVAVVRNRERGEYEAFRLAMGCTQ
Ga0187819_100323523	3300017943	Freshwater Sediment	WQVLATSSAEETGDSVRAYEFPDRDPVAVSGAVDFPGGGVITALWTEAKGDTAVAVTRNRETGTYEAFRLAVVCSQ
Ga0187879_100685751	3300017946	Peatland	QVLATGTAENGMDTIRAYEIADRDPVPVSAALDFSGEITALWAEAKGDGAIAVVRDRETGDYEALRVAVACSQ
Ga0187847_106614841	3300017948	Peatland	RAYEFPDRDAVPVSQALDVGARLTALWTEAKGDTAIAVTRSGETGSYEAFRMAVGCNQ
Ga0187822_100677091	3300017994	Freshwater Sediment	REPAAVSQPLEFGGGITALWTEAKGGTAIAVSRNAKTGNYEAFRLALACAN
Ga0187816_103757931	3300017995	Freshwater Sediment	AYEFPDRDPVAVSAAIDFPGSITVLWTEAKGDTAIAVEKNQETGNYEAFRLAVVCSQ
Ga0187816_104047201	3300017995	Freshwater Sediment	WVRAFEFPDRDPVAVSGAVDFPGGVVTALWTEAKGDTAIAVVRDRETGNYDAFRLAVACS
Ga0187876_100298610	3300018003	Peatland	VPVSAALDFPGEITALWTEAKGDSAVAVVRNRETGAYEAFRLAAACSQ
Ga0187810_104192132	3300018012	Freshwater Sediment	PVAVSAAVDFSGPVSALWTEARGDGAIAIAKNRDTGSYEAFRLSLACGQ
Ga0187871_103578951	3300018042	Peatland	PCESGWQVLATGTAENGMDTIRAYEIADRDPVPVSAALDFSGEITALWAEAKGDGAIAVVRDRETGDYEALRVAVACSQ
Ga0187784_108536611	3300018062	Tropical Peatland	ATGDSIRAFEFPDRDPVPVSAPVEFSGEITALWTEGKGDSAIAISRNRETGSYEAFRLAVSCGQ
Ga0193729_10491043	3300019887	Soil	ELADRDPVPVSLAADFAGEITALWTEIKGDTAVAVARNQRTGNYEAFRLAATCNQ
Ga0210407_102005322	3300020579	Soil	SSGNNPGDSVRAYELADRDPVPVSMAADFAGEITALWTEIKGDTAVAVARNQRTGDYEAFRLAATCNQ
Ga0210400_115041892	3300021170	Soil	SGDVAEDTLRAYEIPDRDPVAVSAATDLPGTITTLWTEPRGDTAIAVARNRETGNYEAFRLALACQ
Ga0210396_100459824	3300021180	Soil	SVKTACGAGWQVLAASSEGTGDSVHTYEFPDRDPVAVSAAIDFQGGAITALWTEAKGDTAIAVVRNRETRSYEAFRLAVVCSQ
Ga0210396_111930882	3300021180	Soil	DPVAVSAAVELPGRVTALWTEAKGDRAIAVVRHGETGEYEALRLSVACGQ
Ga0210388_100789273	3300021181	Soil	LATSSAESGDSVRAYEFPDRDPVAVSAAVEFTGAVTALWTETRGDTALAVVKNRETGSYEAVRLALACSQ
Ga0210385_109857301	3300021402	Soil	SGDVAEDTLRAYEIPDRDPVAVSAATDLPGTITTLWTEPRGDTAITVARNRETGNYEAFRLALACQ
Ga0210397_109119192	3300021403	Soil	RDPVAVSAAVDFPGSGVITALWTEAKGDTAIVVAKNRETGTYEAFRLAVVCSQ
Ga0210389_106064231	3300021404	Soil	IRAFEFPDRDPVAVSAVVEFPGPVSALWTEARGDSAIAIARNRDTGSYEAFRLSLACGQ
Ga0210386_112910812	3300021406	Soil	DRDPVAVSAATDLPGTITTLWTEPRGDTAITVARNRETGNYEAFRLALACQ
Ga0210386_117265722	3300021406	Soil	FPDRDAVAVSSAVDFSGGVIRALWTEAKGDAAVAVVRNRETGSYEAFRLAVACSQ
Ga0210383_102383222	3300021407	Soil	DSVRAYEIADRDPVPVSAALDFSGEIIALWTQAKGDRAIAVAQNRETRDYEAFLLEAACG
Ga0210384_112612581	3300021432	Soil	SVRAYEFPDRDPVAVSAAVDFPGSGVITALWTEAKGDTAIAVAKNRETGTYEAFRLAVVCSQ
Ga0210391_115584931	3300021433	Soil	DRDPVAVSAAVDFPGAGVVTALWTEAKGDTAIAVVKNQETGSYEAFRLAVVCSQ
Ga0210398_103604301	3300021477	Soil	VPVSAALDFGATVTALWTEAKGDTAMAVTRNGETGSYEAFRVAVACTL
Ga0210402_103497702	3300021478	Soil	LRAYEFPDRDPVAVSAAIDFPGPITVLWTESRGDTAIAVARNRDTGSYEAFQLAVVCSQ
Ga0210410_100355594	3300021479	Soil	TSSDEGNGDSLRAYEFPDRDAVAVSSAIDFSGGAIRALWTEAKGDAAVAVVRNRETGSYEAFRLAVACSQ
Ga0210410_101970601	3300021479	Soil	EFPDRDPVAVSAAIDFQGGAITALWTEAKGDTAIAVVRNRETRSYEAFRLAVVCSQ
Ga0210410_102714341	3300021479	Soil	DPVAVSAAIDFTGMMTALWTEAKGDTAIAVVKNRETGNYEAYRVAVVCSQ
Ga0210410_114710051	3300021479	Soil	ATSSGDQATDSVRAYEFPDRDPVAVSAALDVRGEITALWTEAMGDTAIVVVRDQDSGSHEAFRVALVCNQ
Ga0210409_100341331	3300021559	Soil	GAGWQVMATGSGDAGDSLRAYEFPDRDPVAVSAAMDFSGAITALWTEARGDTSVIVVRDRETGTYEAFRVALACSQ
Ga0126371_101615511	3300021560	Tropical Forest Soil	RAYEFPDRDPVAVSAAIDFPGPVSALWTETHGDTAIAIARNRDTGSYEAFRLLLSCGQ
Ga0213851_17562641	3300021860	Watersheds	VLSSAAVRSDDDQSEDTVRAYEIPDRDPVAVSAAADFAGPITALWTEAKGDSAIAVARNRETGSYEAFRLAMACGQ
Ga0213853_108713693	3300021861	Watersheds	EFPDRDPVAVSAAADFAGPVTALWTEAKGDSAIAVARNRETGSYEAFRLAMACGQ
Ga0212123_101379341	3300022557	Iron-Sulfur Acid Spring	ENGPGNGVDSVRLYEIADRDPVPVSAALDFPGEITALWTEAKGDSAMAVVRNHETGDYEAFRLAVACSQ
Ga0242657_10217792	3300022722	Soil	LATSSDEGNGDSVRAYEFPDRDAVAVSSAVDFSGGVIRALWTEAKGDAAVAVVRNRETGSYEAFRLAVACSQ
Ga0224545_10392541	3300022881	Soil	GDAVRAYEFPDRDPIAVSPALDFPGAITALWTEEKGDTAIAVAKNRETGNYEAYRVAAACNP
Ga0208323_10050504	3300025439	Peatland	IADRAPVPVSAALDFPGEITALWTEAKGDSAVAVVRNRETGAYEAFRLAAACSQ
Ga0208820_10077421	3300025576	Peatland	AADSVRAYEFPDRDPVAVSAPIDLPGAITALWTEARGDTAVVVVRDQEAGSYASFRLAVACSQ
Ga0208691_10078193	3300025612	Peatland	GWQALATGAGENAGNSGADSVRAYEIADRAPVPVSAALDFPGEITALWTEAKGDSAVAVVRNRETGAYEAFRLAAACSQ
Ga0208457_10924722	3300025812	Peatland	LATGAGENAGNSGADSVRAYEIADRAPVPVSAALDFPGEITALWTEAKGDSAVAVVRNRETGAYEAFRLAAACSQ
Ga0207693_110424431	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	SGEGSGGDEVRAYEFPDRDPIAVTASIDFAGAITALWTETKGETAIAVVRNRNTGNYEAFRLAISCSQ
Ga0207663_108468061	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	AVRAYELPDRDPLAVSDTVDFAGGITALWTEAKGGTAVAVSRNSETGNYEAFRLAMACGQ
Ga0207700_110013301	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	YEFPDRDAVAVSAGVDFPGAITALWTEAKGDTAIAVAKNHETGSYEAFRLAVACSQ
Ga0208778_10295301	3300026025	Rice Paddy Soil	FPDRDPVAVSAAVDLPGTLSELWTESSGDTAIGIVKNRETGNYEAFRLAMACN
Ga0209529_10752211	3300027334	Forest Soil	TSSEETPGDRVRAYEFPDRDPVAVSVAVDFPGAGVVTALWTEAKGDTAIAVVKNRETGSYEAFRLAVVCSQ
Ga0209332_10542062	3300027439	Forest Soil	GAGWQVLATTSESSSEAGTRDSVRAYEFPDRDPVAVSAALDFPGGMITALWTEAKADTAIAVVRNRENGSYEAFRLALVCSQ
Ga0209009_11591922	3300027667	Forest Soil	PDRDPVAVSAALDFPGGMITALWTEAKADTAIAVVRNRENGNYEAFRLALVCSQ
Ga0209274_101487722	3300027853	Soil	DIASLKTACGSGAQLMATSSAQNGPGSGTDSVRLYEIADRDPVPVSAVLDFPGEITALWREAKGDTAIAVVRNHETGEYEAFRLAVACSQ
Ga0209517_100121661	3300027854	Peatlands Soil	SSEEANGDWVRAFEFPDRDPVAVSGPVDFSGGVITALWTEAKGDTAIAVVRNRETGNYDAFRLAVACSQ
Ga0209517_102149791	3300027854	Peatlands Soil	DAVAVSAAIDFPGAGVIAALWAEAKGDAAVAVVRNRETGSYEAFRLAVACSQ
Ga0209693_105770631	3300027855	Soil	QNGPGSGTDSVRLYEIADRDPVPVSAVLDFPGEITALWREAKGDTAIAVVRNHETGEYEAFRLAVACSQ
Ga0209275_108744531	3300027884	Soil	AVAVSAALEFSGAITALWTEEKGDSAIAVVKNRGTGVYESFRVALACGQ
Ga0209624_100636743	3300027895	Forest Soil	MATSSAQNGPGSGTDSVRLYEIADRDPVPVSAVLDFPGEITALWREAKGDTAIAVVRNHETGEYEAFRLAVACSQ
Ga0209624_103070451	3300027895	Forest Soil	PVAVSAPIDFQGGAITALWTEAKGDTAIAVVRNRETRSYEAFRLAVVCSQ
Ga0209067_107591252	3300027898	Watersheds	WQVLATTSESGSEAGTGDSVRAYEFPDRDPVAVSAALDFPGGMITALWTEAKADTAIAVVRNRENGSYEAFRLALVCSQ
Ga0265356_10112011	3300028017	Rhizosphere	SGTDSVRLYEIADRDPVPVSAVLDFPGEITALWREAKGDTAIAVVRNHETGEYEAFRLAVACSQ
Ga0311369_114406681	3300029910	Palsa	SVRAYEFPDRDPVAVSAAVDFSNGESVTALWTEGQGDTAIAVMRNRETGTYAAVRLALACNQ
Ga0311340_114319741	3300029943	Palsa	LCSSGWQLLAAGAGSNDADSMRAYEFPDRDPVPVSAALDFPGEITALWTEGKGDTAIVVTRNRKMGDYEAFRLAMACGQ
Ga0311371_110672342	3300029951	Palsa	PVAVSAAIDLAGAVTALWTEAKGDTAIAVVRNREMGSYEAFRLAVACSQ
Ga0311339_101520271	3300029999	Palsa	AYELPDRDPVAVSPALEFHGDISALWTEAKGDSAIVVSRNRETEMYETFRLSVGCGQ
Ga0311339_102521203	3300029999	Palsa	DAVPVSAGADFGATVTALWTEAKGDTAMAVTRNETGSYEAFRVAVACNQ
Ga0311338_108612501	3300030007	Palsa	GAGWQVLATSSGDTGDSVRAYEFPDRDPVAVSAAVDFSNGESVTALWTEGQGDTAIAVMRNRETGTYAAVRLALACNQ
Ga0302181_104903102	3300030056	Palsa	DLASVKTACGAGWQMLATSSETTVGDAVRAYEFPDRDPVAVSAAVDFTGGVITALWTEAKSDTAIAVVRNRETGSYEAFRLAISCSQ
Ga0311353_105642441	3300030399	Palsa	LAVNSDSDRRDDSIVAYELPDRDPVAVSPALEFHGDISALWTEAKGDSVIAVSRNRETGMYEAFRLSVGCGQ
Ga0311354_110417031	3300030618	Palsa	AVSAAVDFSNGESVTALWTEGQGDTAIAVMRNRETGTYAAVRLALACNQ
Ga0310038_101324062	3300030707	Peatlands Soil	WQLLATSSAEGTGESVRAYEFPDRDPVAVSAAIEFPQAGVITALWTEAKGDTAVAVARDRETGSYEAFRLALACSQ
Ga0265760_102506272	3300031090	Soil	ATNSGGEAGDSVRAYEFPDRDPVAVSAAIDFPGSITTLWAEAKGDTAIAVTKNPETGTYEAFRLAVVCTQ
Ga0302324_1024116711	3300031236	Palsa	DRRDDSIVAYELPDRDPVAVSPALEFHGDISALWTEAKGDSAIVVSRNRETEMYETFRLSVGCGQ
Ga0265339_101190451	3300031249	Rhizosphere	SAAVDFPGNGIVTALWTEAKGETAIAVTRNRDTGTYEAFRLVVVCSQ
Ga0302326_107760352	3300031525	Palsa	EFPDRDAVPVSAGADFGATVTALWTEAKGDTAIAVTRSETGSYEAFRVAVACNQ
Ga0310915_107941482	3300031573	Soil	GDNATDSVQAYEFPDRDPVAVGPAVDFPGGITALWTESAGTTALAVAHNTETGNYEAYRLAVVCGQ
Ga0318561_100847663	3300031679	Soil	DAVRAYEVVDREAAAVSAPLEFGGGITALWTEAKGGTAIAVSRNADTGNYEAFRLALACT
Ga0265314_102168621	3300031711	Rhizosphere	EFPDRDPVAVSAAVDFPGNGIVTALWTEAKGETAIAVTRNRDTGTYEAFRLVVVCSQ
Ga0307476_102892421	3300031715	Hardwood Forest Soil	PDRDPVAVSQPIEFAGGITALWTEARGGSAMAVSRNAETGNYEAFRLALACAQ
Ga0307474_110426451	3300031718	Hardwood Forest Soil	ARLDWGELASVKTACGAGWQVLAASSEGTGDSVHTYEFPDRDPVAVSAAIDFQGGAITALWTEAKGDTAIAVVRNRETRSYEAFRLAVVCSQ
Ga0307474_113263192	3300031718	Hardwood Forest Soil	EFPDHDPVAVSPALNFSSTGVVTALWTEAKGDTAVAVVKDRETGTYEAFRLAMACSQ
Ga0307478_113437342	3300031823	Hardwood Forest Soil	TACGSGWQILATRTGDNSGDSISAYELPDREPIQASQAVDFAGDVVALWTEAKGSTAIAVSRNAGTGTYEAFRLAITCGQ
Ga0318512_104792042	3300031846	Soil	VVDREAAAVSAPLEFGGGITALWTEAKGGTAIAVSRNADTGNYEAFRLALACTN
Ga0306925_117610531	3300031890	Soil	AYEFPDRDAVAVSAPSDLPGAISALWTEARGDTAIVIVKNRETGGYEAYRMEVACSQ
Ga0306926_121796632	3300031954	Soil	SGWQLLATSGGDNATDSVQAYEFPDRDPVAVSPAVDFPGGITALWSDSAGTTALAVARNTETGNYEAYRLAVVCGQ
Ga0307479_110433311	3300031962	Hardwood Forest Soil	GSGAGTGDSVRAYEFPDRDPVAVSAALDFPGGMITALWTEAKADAAIAVVRNRESGSYEAFRLALVCSQ
Ga0307479_117496502	3300031962	Hardwood Forest Soil	EFPDRNPVAVSAAVDFSGVGAITALWAEARADTAIAIVRNRETGSYEAYRLAVVCSQ
Ga0308176_115318022	3300031996	Soil	STEKDDSVRAYEFPDRDPVAVSATVDLPGTLSELWTESSGDTAIAIVKNRETGNYEAFRLAMACN
Ga0306922_108966212	3300032001	Soil	YEFPDRDPVAVGPAVDFPGGITALWTESAGTTALAVAHNTETGNYEAYRLAVVCGQ
Ga0311301_104479821	3300032160	Peatlands Soil	AFEFPDRDPVAVSAAVDFSGGVTALWTEARGDAALVVARNAETGNYEAFRLAVACSQ
Ga0307471_1003432133	3300032180	Hardwood Forest Soil	NSGDSVRAFEFPDREPIAVSAALDFAGGVTALWTEAKGGSAIAVSRNAETGNYEAFRLVLACNQ
Ga0335073_102031831	3300033134	Soil	YEFPDRDPVAVSPQVDFEGAITALWTEARGDTAVAISQNLDTGSYDAFRLAMACGQ
Ga0318519_104161261	3300033290	Soil	ASVKSSCASGWQLLATSGGDNATDSVQAYEFPDRDPVAVSPAVDFPGGITALWSDSAGTTALAVARNTETGNYEAYRLAVVCGQ
Ga0316212_10693632	3300033547	Roots	ATSSEEADGDWVRAFEFPDRDPVAVSGAIDFPGGSVTALWTEARADTAVAVVRNRETGSYDAFRLAMACSQ
Ga0314866_031711_1_156	3300033807	Peatland	RDPVAVSAAVEFPGAVTALWTEARGDSAVAVVRNRETGSYEAYRLAVACSQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061124

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences