Metagenome / Metatranscriptome Family F061185

Basic Information
Family ID	F061185
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	70 residues
Representative Sequence	MRVVVYDEAGEIALDYDTRRDTLSLCPGRLEKAQVVEALQEAAFFVMDGPAPTPEGRNFREHIFEGDQGE
Number of Associated Samples	92
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	81.06 %
% of genes near scaffold ends (potentially truncated)	28.79 %
% of genes from short scaffolds (< 2000 bps)	90.15 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Most Common Taxonomy
Group	Unclassified (82.576 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.485 % of family members)
Environment Ontology (ENVO)	Unclassified (25.758 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (70.455 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.41% β-sheet: 11.22% Coil/Unstructured: 68.37%
Feature Viewer

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Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF00498	FHA	2.27
PF01058	Oxidored_q6	2.27
PF09361	Phasin_2	1.52
PF00072	Response_reg	0.76
PF13727	CoA_binding_3	0.76
PF00589	Phage_integrase	0.76
PF13505	OMP_b-brl	0.76
PF07282	OrfB_Zn_ribbon	0.76
PF03950	tRNA-synt_1c_C	0.76
PF04392	ABC_sub_bind	0.76
PF01391	Collagen	0.76
PF01047	MarR	0.76
PF13763	DUF4167	0.76
PF07769	PsiF_repeat	0.76
PF11272	DUF3072	0.76
PF01957	NfeD	0.76
PF01590	GAF	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG0377	NADH:ubiquinone oxidoreductase 20 kD subunit (chain B) or related Fe-S oxidoreductase	Energy production and conversion [C]	2.27
COG1740	Ni,Fe-hydrogenase I small subunit	Energy production and conversion [C]	2.27
COG1941	Coenzyme F420-reducing hydrogenase, gamma subunit	Energy production and conversion [C]	2.27
COG3260	Ni,Fe-hydrogenase III small subunit	Energy production and conversion [C]	2.27
COG0008	Glutamyl- or glutaminyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.76
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.76

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.58 %
All Organisms	root	All Organisms	17.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.58 %
cellular organisms	root	All Organisms → cellular organisms	17.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.58 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	17.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.58 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	15.15 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.58 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13.64 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.58 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.82 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.27 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.58 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.03 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.27 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.58 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.27 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.52 %
unclassified Bradyrhizobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae	0.76 %
Candidatus Sulfotelmatomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.58 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.27 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.52 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	0.76 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001471\|JGI12712J15308_10109526	Not Available	702	Open in IMG/M
3300002245\|JGIcombinedJ26739_100095240	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	2783	Open in IMG/M
3300002245\|JGIcombinedJ26739_100758129	Not Available	850	Open in IMG/M
3300002245\|JGIcombinedJ26739_101625876	Not Available	544	Open in IMG/M
3300003505\|JGIcombinedJ51221_10059852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1466	Open in IMG/M
3300003505\|JGIcombinedJ51221_10223724	Not Available	764	Open in IMG/M
3300005332\|Ga0066388_100196092	All Organisms → cellular organisms → Bacteria → Proteobacteria	2637	Open in IMG/M
3300005332\|Ga0066388_100570121	Not Available	1759	Open in IMG/M
3300005332\|Ga0066388_103587859	Not Available	792	Open in IMG/M
3300005332\|Ga0066388_104501413	Not Available	710	Open in IMG/M
3300005363\|Ga0008090_15624408	Not Available	775	Open in IMG/M
3300005434\|Ga0070709_11408762	Not Available	564	Open in IMG/M
3300005436\|Ga0070713_102149238	Not Available	541	Open in IMG/M
3300005538\|Ga0070731_10568537	Not Available	755	Open in IMG/M
3300005541\|Ga0070733_10932112	Not Available	583	Open in IMG/M
3300005546\|Ga0070696_100307475	Not Available	1216	Open in IMG/M
3300005764\|Ga0066903_100840088	Not Available	1650	Open in IMG/M
3300005764\|Ga0066903_101027477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1510	Open in IMG/M
3300005764\|Ga0066903_101721626	Not Available	1194	Open in IMG/M
3300005764\|Ga0066903_101994105	Not Available	1115	Open in IMG/M
3300006052\|Ga0075029_100263452	Not Available	1091	Open in IMG/M
3300006052\|Ga0075029_100390214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	903	Open in IMG/M
3300006059\|Ga0075017_100919049	Not Available	679	Open in IMG/M
3300006173\|Ga0070716_101212927	Not Available	606	Open in IMG/M
3300006354\|Ga0075021_10944639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	561	Open in IMG/M
3300009098\|Ga0105245_11230291	Not Available	797	Open in IMG/M
3300009176\|Ga0105242_11367980	Not Available	734	Open in IMG/M
3300009553\|Ga0105249_12718335	Not Available	567	Open in IMG/M
3300009700\|Ga0116217_10088835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2132	Open in IMG/M
3300010046\|Ga0126384_11286383	Not Available	678	Open in IMG/M
3300010048\|Ga0126373_11214169	Not Available	820	Open in IMG/M
3300010162\|Ga0131853_10564442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	995	Open in IMG/M
3300010361\|Ga0126378_10605051	Not Available	1210	Open in IMG/M
3300010366\|Ga0126379_12295421	Not Available	640	Open in IMG/M
3300010371\|Ga0134125_11271408	Not Available	803	Open in IMG/M
3300010371\|Ga0134125_12435231	Not Available	569	Open in IMG/M
3300010376\|Ga0126381_101151923	Not Available	1120	Open in IMG/M
3300010376\|Ga0126381_101359253	Not Available	1027	Open in IMG/M
3300010376\|Ga0126381_104464771	Not Available	540	Open in IMG/M
3300010398\|Ga0126383_12758647	Not Available	573	Open in IMG/M
3300012089\|Ga0153924_1128484	Not Available	523	Open in IMG/M
3300012180\|Ga0153974_1166228	Not Available	523	Open in IMG/M
3300012951\|Ga0164300_10260177	Not Available	886	Open in IMG/M
3300012955\|Ga0164298_10860504	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300012957\|Ga0164303_10566826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	741	Open in IMG/M
3300012958\|Ga0164299_10272782	Not Available	1024	Open in IMG/M
3300012960\|Ga0164301_10426028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	936	Open in IMG/M
3300012971\|Ga0126369_11172025	Not Available	858	Open in IMG/M
3300012987\|Ga0164307_10576749	Not Available	863	Open in IMG/M
3300012987\|Ga0164307_10739066	Not Available	775	Open in IMG/M
3300012989\|Ga0164305_10205358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1389	Open in IMG/M
3300012989\|Ga0164305_10268140	Not Available	1244	Open in IMG/M
3300013306\|Ga0163162_12212155	Not Available	631	Open in IMG/M
3300015371\|Ga0132258_13220689	Not Available	1125	Open in IMG/M
3300016294\|Ga0182041_10737681	Not Available	876	Open in IMG/M
3300016319\|Ga0182033_10676135	Not Available	902	Open in IMG/M
3300016341\|Ga0182035_12156239	Not Available	505	Open in IMG/M
3300016357\|Ga0182032_10683843	Not Available	860	Open in IMG/M
3300016371\|Ga0182034_11818161	Not Available	537	Open in IMG/M
3300016387\|Ga0182040_11299776	Not Available	614	Open in IMG/M
3300016404\|Ga0182037_11841932	Not Available	541	Open in IMG/M
3300016445\|Ga0182038_10541021	Not Available	999	Open in IMG/M
3300016445\|Ga0182038_10598565	Not Available	951	Open in IMG/M
3300016445\|Ga0182038_11564996	Not Available	592	Open in IMG/M
3300016445\|Ga0182038_11881620	Not Available	541	Open in IMG/M
3300017822\|Ga0187802_10080999	Not Available	1210	Open in IMG/M
3300017924\|Ga0187820_1239715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	579	Open in IMG/M
3300017933\|Ga0187801_10227064	Not Available	745	Open in IMG/M
3300017942\|Ga0187808_10484558	Not Available	572	Open in IMG/M
3300017955\|Ga0187817_10903419	Not Available	565	Open in IMG/M
3300017970\|Ga0187783_10037319	Not Available	3602	Open in IMG/M
3300017970\|Ga0187783_10248095	Not Available	1302	Open in IMG/M
3300017970\|Ga0187783_11132663	Not Available	564	Open in IMG/M
3300017973\|Ga0187780_11221718	Not Available	551	Open in IMG/M
3300018006\|Ga0187804_10170433	Not Available	923	Open in IMG/M
3300018062\|Ga0187784_10111118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2234	Open in IMG/M
3300020579\|Ga0210407_10522847	Not Available	927	Open in IMG/M
3300020579\|Ga0210407_10992143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	641	Open in IMG/M
3300020579\|Ga0210407_11267493	Not Available	552	Open in IMG/M
3300020582\|Ga0210395_10434634	Not Available	987	Open in IMG/M
3300020583\|Ga0210401_10056538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3698	Open in IMG/M
3300020583\|Ga0210401_10408420	Not Available	1220	Open in IMG/M
3300020583\|Ga0210401_10601127	Not Available	962	Open in IMG/M
3300021171\|Ga0210405_10353600	Not Available	1159	Open in IMG/M
3300021171\|Ga0210405_10443112	Not Available	1021	Open in IMG/M
3300021178\|Ga0210408_10774130	Not Available	753	Open in IMG/M
3300021401\|Ga0210393_10058720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3029	Open in IMG/M
3300021407\|Ga0210383_10225658	Not Available	1605	Open in IMG/M
3300021420\|Ga0210394_10356721	Not Available	1285	Open in IMG/M
3300021420\|Ga0210394_10679857	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300021432\|Ga0210384_11692490	Not Available	538	Open in IMG/M
3300021474\|Ga0210390_10528913	Not Available	992	Open in IMG/M
3300021474\|Ga0210390_11104990	Not Available	644	Open in IMG/M
3300021474\|Ga0210390_11419331	Not Available	552	Open in IMG/M
3300021477\|Ga0210398_10365348	Not Available	1177	Open in IMG/M
3300021560\|Ga0126371_10474334	Not Available	1398	Open in IMG/M
3300021560\|Ga0126371_11635449	Not Available	769	Open in IMG/M
3300021560\|Ga0126371_12981337	Not Available	573	Open in IMG/M
3300025932\|Ga0207690_10639704	Not Available	871	Open in IMG/M
3300025932\|Ga0207690_11850641	Not Available	504	Open in IMG/M
3300025939\|Ga0207665_10378623	Not Available	1074	Open in IMG/M
3300025939\|Ga0207665_11435964	Not Available	549	Open in IMG/M
3300027908\|Ga0209006_10135598	Not Available	2166	Open in IMG/M
3300031090\|Ga0265760_10174260	Not Available	716	Open in IMG/M
3300031545\|Ga0318541_10834269	Not Available	514	Open in IMG/M
3300031573\|Ga0310915_10298242	Not Available	1139	Open in IMG/M
3300031679\|Ga0318561_10199505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1085	Open in IMG/M
3300031708\|Ga0310686_106404582	All Organisms → cellular organisms → Bacteria → Proteobacteria	17789	Open in IMG/M
3300031744\|Ga0306918_11112022	Not Available	612	Open in IMG/M
3300031770\|Ga0318521_10494343	Not Available	735	Open in IMG/M
3300031771\|Ga0318546_10518301	Not Available	837	Open in IMG/M
3300031771\|Ga0318546_10689340	Not Available	719	Open in IMG/M
3300031781\|Ga0318547_11057498	Not Available	508	Open in IMG/M
3300031890\|Ga0306925_10091389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3232	Open in IMG/M
3300031890\|Ga0306925_10533745	Not Available	1246	Open in IMG/M
3300031910\|Ga0306923_12040688	Not Available	581	Open in IMG/M
3300031912\|Ga0306921_11376456	Not Available	777	Open in IMG/M
3300031912\|Ga0306921_12714945	Not Available	509	Open in IMG/M
3300031942\|Ga0310916_10809318	Not Available	789	Open in IMG/M
3300031942\|Ga0310916_11164180	Not Available	639	Open in IMG/M
3300031945\|Ga0310913_10771359	Not Available	679	Open in IMG/M
3300031946\|Ga0310910_10446622	Not Available	1026	Open in IMG/M
3300031954\|Ga0306926_11950243	Not Available	662	Open in IMG/M
3300031954\|Ga0306926_12689175	Not Available	541	Open in IMG/M
3300032001\|Ga0306922_11694159	Not Available	626	Open in IMG/M
3300032059\|Ga0318533_10927496	Not Available	639	Open in IMG/M
3300032076\|Ga0306924_10785805	Not Available	1062	Open in IMG/M
3300032160\|Ga0311301_10136511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4519	Open in IMG/M
3300032160\|Ga0311301_10210245	Not Available	3309	Open in IMG/M
3300032160\|Ga0311301_10424694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2019	Open in IMG/M
3300032160\|Ga0311301_11171105	Not Available	990	Open in IMG/M
3300032261\|Ga0306920_103637346	Not Available	567	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.42%
Host-Associated	Host-Associated	7.58%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.85%
Aquatic	Environmental → Aquatic	7.58%
Plants	Host-Associated → Plants	5.30%
Fungi	Host-Associated → Fungi	1.52%
Arthropoda	Host-Associated → Arthropoda	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.85%
Freshwater	Environmental → Aquatic → Freshwater	4.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.79%
Sediment	Environmental → Aquatic → Sediment	3.03%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.52%
Mycelium	Host-Associated → Fungi → Mycelium	1.52%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.15%
Loam	Environmental → Terrestrial → Soil → Loam	15.91%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.55%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.27%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.52%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	1.52%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.76%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	40.15%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.24%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.36%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.55%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.52%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	1.52%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.76%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.06%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.30%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.55%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.55%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.79%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.79%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.03%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.52%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.52%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	1.52%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010162	Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 2)	Host-Associated	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012089	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ008 MetaG	Host-Associated	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12712J15308_101095261	3300001471	Forest Soil	DDAGDVAFDYHTQKDTVSLCPGRLEKARVVEALQEAAFFILDAPAPSPEARNFRQHMFEGDHGE*
JGIcombinedJ26739_1000952403	3300002245	Forest Soil	MRVIVYDDAGDVAFDYHTQKDTVSLCPGRLEKARVVEALQEAAFFILDAPAPSPEARNFRQHMFEGDHGE*
JGIcombinedJ26739_1007581293	3300002245	Forest Soil	RCTAVTRVRENLPMRVVVYDEVGGLALDYDTLRDTLSLCPGRLEKAQVIESLQEAAFFIMDAPAPSPEDRNFRQHVFEGDQGE*
JGIcombinedJ26739_1016258761	3300002245	Forest Soil	MRVVVYDEAGEIALDYDTRHDTLSLCPGRREKAQVVEALQEAAFFVMDGPAPTPEGRNF
JGIcombinedJ51221_100598524	3300003505	Forest Soil	MRVVVYDEAGEIALDYDTRRDTLSLCPGRLEKAQVVEALQEAAFFVMDGPAPTPEGRNFREHIFEGDQGE*
JGIcombinedJ51221_102237242	3300003505	Forest Soil	MRVVVYDDTGDIACSYDRHRDTFSLCPGRLEKAQVVEALQEAAFFILNGPAPAPESRTFRQNVFEGDEGE*
Ga0066388_1001960923	3300005332	Tropical Forest Soil	MRVVVYDELGDAALDYNTHRDTISLCPGRLEKAQVIEALHEAAFFIMDAPAPTPEDRSFRQNIYEGDQGE*
Ga0066388_1005701213	3300005332	Tropical Forest Soil	MRVVVYDDTGDVACSYDLHRDTFALCPGRLEKAQVVEALQEAAFFILNGPAPAPESRTFRQNVIEGDEGE*
Ga0066388_1035878591	3300005332	Tropical Forest Soil	MRIVVYDEAGDVALDHHTGKGTISLFPGRLEKAQVVEALQEAAYFIMDAPVPSPEGRTFRHHLFDGDDGE*
Ga0066388_1045014131	3300005332	Tropical Forest Soil	MRIVVYDETGQVALDHYTQKDTVSLCPGRMEKARVVEALQEAVFFIMDGPAPSPEDRNIRQVVFEGDDGE*
Ga0008090_156244082	3300005363	Tropical Rainforest Soil	MRVLVYDELGDVALDYDTRTDMVPLCPGRLEKAQVVEALQEAAFFIMDAPAPAPEGRASRQRVFEGDDGE*
Ga0070709_114087621	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MRVVVYDEAGEIALDYDTRRDTLSLCPGRLEKAQVVEALQEAAFFVMDGPAPTPEGR
Ga0070713_1021492381	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRIVVYDDAGGVALDHDPLKEPVTLCPGRLEKARVVEALQEAAFFLMGGPAPSPEGRNFRRAAFEGDDGE*
Ga0070731_105685372	3300005538	Surface Soil	MRVIVYDEAGDVAFDYYTQGDTISLCPGRLEKAQAVEALQEAAFFIMDAPAPSPEARNFRQHAFEGDHGE*
Ga0070733_109321122	3300005541	Surface Soil	MLVVVYDGTGDVAFRFDTKRDTVSLCPGRLEKAEVVEALQEAAFFIMDGPAPSPDGRAYRQHVFEGDNSE*
Ga0070696_1003074752	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MRVVVYDQLGEVALDYRTQINAVSLCPGRLEKAQVVEALQEAVLFVMDGPAPSPEERNFRQPEFVGDDGES*
Ga0066903_1008400884	3300005764	Tropical Forest Soil	VLVVVYDDAGDIAFRFDTHKDTVSLRPGRLEKAHVVETLQEAAFFIMDGPVPSPDDRAYRPHVFEGDDGE*
Ga0066903_1010274772	3300005764	Tropical Forest Soil	MRIVVFDETDDVAFSYDTRRDTLALCPGRVEKAHVIEALQEAAFFIMDGPEPSPETRTFQRHVFESDEDVD*
Ga0066903_1017216263	3300005764	Tropical Forest Soil	RPMRIVVYDETGQVALDHYTQKDTVSLCPGRMEKARVVEALQEAVFFIMDGPAPSPEGRNIRQVVFEGDDGE*
Ga0066903_1019941052	3300005764	Tropical Forest Soil	MRVVVYDDTGDIACSYYPQRDTFSLCPGRLEKAQVVEALQEAAFFIMNGPVPAPESRTFRQNVFEGDEGE*
Ga0075029_1002634522	3300006052	Watersheds	MRVVVYDEMDDVALDYDTRKDTLSLCPGRLEKAQVIEALQEAAFFIMDGPAPTPERRAFRHHVYEGDQGE*
Ga0075029_1003902142	3300006052	Watersheds	MRVVVYDETGEMTLDYDTRSDTLSLCPGRLEKAQVVESLQEAAFFVRPAPTPEGRNFRHHVFEGDQGE*
Ga0075017_1009190491	3300006059	Watersheds	MRVVVYDEVGGLALDYDTRRDTLSLCPGRLEKAQVIESLQEAAFFIMDAPAPSPEDRNFRQHVFEGDQGE*
Ga0070716_1012129272	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MRVVVYDEAGEIALDYDTRRDTLSLCPGRLEKAQVVEALQEAAFFVMDGPAPTPEGRNFREH
Ga0075021_109446391	3300006354	Watersheds	MRVIVYDEAGDVAFDYYTQRDTISLCPGRLEKAQVVEALQEAAFFIMDAPVPSPEARNFRQHVFEGD
Ga0105245_112302911	3300009098	Miscanthus Rhizosphere	MRIVVYDEAGDVALDHNPVKETVSLCPGRLEKARVVEALQEAAFFIMGGPAPTPEGRNFRQSAFEGDDGE*
Ga0105242_113679801	3300009176	Miscanthus Rhizosphere	VYDQLGEVALDYRTQINAVSLCPGRLEKAQVVEALQEAVLFVMDGPAPSPEERNFRQPEFVGDDGE
Ga0105249_127183351	3300009553	Switchgrass Rhizosphere	MRVVVYDQLGEVALDYRTQINAVSLCPGRLEKAQVVEALQEAVLFVMDGPAPSPEERNGRQPEFVGDDGES*
Ga0116217_100888353	3300009700	Peatlands Soil	MRVVVYDETGEMTLDYDTRSDTLSLCPGRLEKAQVVESLQEAAFFVRPAPTPEGRNFRHHVFE
Ga0126384_112863832	3300010046	Tropical Forest Soil	MLVVVYDDVGEVAFRFETQRDTLALCPGRLEKAHVVEALQEAAFFIMDGPAPPPDSRAFRRHLFEGDDGE*
Ga0126373_112141691	3300010048	Tropical Forest Soil	MMVVVYDDVGEVAFRFDTQRDTVALCPGRLEKAHVVEALQEAAFFIMDGPSPPPDDRTYRQHSIDGDDGE*
Ga0131853_105644421	3300010162	Termite Gut	MRIVVFDEADDVAFSYDTRRDTLALCPGRLEKAHVIEALQEAAFFIMDGPEPSPETRTFQRHVFESDEDVD*
Ga0126378_106050513	3300010361	Tropical Forest Soil	MRVVVYDDTGDIACSYDVHRDTFSLCPGRQEKAQVVEALQEAAFFIMNGPVPAPESRTFRQNVLEGDEGE*
Ga0126379_122954212	3300010366	Tropical Forest Soil	MRVVVYDDAGDIACSYDLHKDTFSLCPGRLEKAQVVEALQEAAFFIMNGPAPAPQNRTFRQNVCEGDEGE*
Ga0134125_112714082	3300010371	Terrestrial Soil	MRVVVYDDAGDIACSYDLHKDTFSLCPGRLEKAQVVEALQEAAFFIMNGPAPAPESRTFRQNVFEGDEGE*
Ga0134125_124352312	3300010371	Terrestrial Soil	MRVVVYDEAGNVAFDYHTQKDTLSLCPGRLEKAQVVEALQEGAFFIMDAPSPSPEARNFRRHVYEGDQGE*
Ga0126381_1011519233	3300010376	Tropical Forest Soil	MRVVVYDDTGDIACSYDVHRDTFSLCPGRQEKAQVVEALQEAAFFIMNGPIPAPESRTFRQNVLEGDEGE*
Ga0126381_1013592531	3300010376	Tropical Forest Soil	VVIEAVNNAFGSTSVLVVVYDDAGDIAFRFDTHKDTVSLCPGRLEKAHVVETLQEAAFFIMDGPVPSPDDRAYRPHVFEGDDGE*
Ga0126381_1044647711	3300010376	Tropical Forest Soil	MQNDDQLSLRLRSISMRVLVYDELGDVALDYDTRTDMVPLCPGRLEKARVVEALQEAAFFIMDAPAPAP
Ga0126383_127586471	3300010398	Tropical Forest Soil	AASSRIRGALPMRVVVYDDTGDIACSYDVHRDTFSLCPGRQEKAQVVEALQEAAFFIMNGPVPAPESRTFRQNVLEGDEGE*
Ga0153924_11284841	3300012089	Attine Ant Fungus Gardens	GALPMRVIVYDEAGDVAFDYYTQRDTISLCPGRLEKAQVVEALQEAAFFIMGAPAPTPEGRTFQRAAFEGDDGE*
Ga0153974_11662282	3300012180	Attine Ant Fungus Gardens	MRVIVYDEDGDLAFDYRTQRRDAFALYPGRQEKALVIEALQEAAFFIMDAPAPTPESRTFRRHVFEGGRRRVTGRAIRLAG*
Ga0164300_102601771	3300012951	Soil	MRVVVYDEAGEIALDYDTRSDTLSLCPGRLEKAQVVEALQEAAFFVMDGPAPTPEGRNFREHIFEGDQGE*
Ga0164298_108605042	3300012955	Soil	MRIVVYDEAGDVALDHNPVKETVSLCPGRLEKARVVEALQEAAFFIMGGPAPTPEARNFRQAAFEGDDGE*
Ga0164303_105668262	3300012957	Soil	MRVVVYDEAGEIALDYDTRSATLSLCPGRLEKAQVVEALQEAAFFVIDGPAPTPEGRNFRQH
Ga0164299_102727821	3300012958	Soil	MRVVVYDEADEIALDYDTRSDTLSLWPGRLEKAQVVEALQEAAFFVIDGPAPTPEGRNFRQHVFEGDQGE*
Ga0164301_104260282	3300012960	Soil	MRVVVYDEAGEIALDYDTRSDTLSLCPGRLEKAQVVEALQEAAFFVIDGPAPTPEGRNFRQHVFEGDQGE*
Ga0126369_111720251	3300012971	Tropical Forest Soil	MRVVVYDDEGDIACSHDLHRDTFSLCPGRLEKARVVEALQEAAFFILNGPVPAPESRT
Ga0164307_105767491	3300012987	Soil	MRVVVYDEAGEIALDYDTRSDTLSLCPGRLEKAQVVEALQEAAFFVIDGPAPTPKGRNFRQHVFEGDQGE*
Ga0164307_107390661	3300012987	Soil	MRVVVYDEAGEIALDYDTRSDTLSLCPGRLEKALVVEALQEAAFFVMDGPAPTPEGRNFREHIFEGDQGE*
Ga0164305_102053581	3300012989	Soil	MRVVVYDEPGEMALDYDTRSDTLSLCPGRLEKAQVVEALQEAAFFVIDGPAPTPEGRNFRQHVFEGDQGE*
Ga0164305_102681402	3300012989	Soil	MRVVVYDEAGEIALDYDTRRDTLSLCPGRLEKAQVVEALQEAAFFVMDGPAPTPEGRN
Ga0163162_122121552	3300013306	Switchgrass Rhizosphere	VYDQLGEVALDYRTQINAVSLCPGRLEKAQVVEALQEAVLFVMDGPAPSPEERNFRQPEFVGDDGES*
Ga0132258_132206891	3300015371	Arabidopsis Rhizosphere	MPIVVYDEAGDLAVDHGPQKATVSLCPGRLEKARVAEALQEAAFFIMGGPAPTPEARNFRQAAFEGDDGE*
Ga0182041_107376811	3300016294	Soil	MRIVVFDETDDVAFSYDTRRDTLALCPGRLEKAHVIEALQEAAFFIMDGPEPSPETRTFQRHVFESDEDVD
Ga0182033_106761352	3300016319	Soil	MLVVVYDDVSEVAFRFETQRDTLALCPGRLEKAHVVEALQKPAFFIMDGPAPPPDSRAFRRHVFEGDDGE
Ga0182035_121562391	3300016341	Soil	MQNDDQLSLRLRSISMRVLVYDELGDVALDYDTRTDMVPLCPGRLEKAQVVEALQEAAFFIMDAPAPAPEGRTSRQRVFEGDDGE
Ga0182032_106838432	3300016357	Soil	MMVVVYDDVGEVAFRFETQRDTVALCPGRLEKAHVVEALQEAAFFIMDGPSPPADDRTYRQHSIDGDNGE
Ga0182034_118181612	3300016371	Soil	MMVVVYDDVGEVAFRFETQRDTVALCPGRLEKAHVVEALQEAAFFIMDGPLPPPDDRTYRQHSIDGDDGE
Ga0182040_112997762	3300016387	Soil	MRVVVYDDTGDIACSYYPQRDTFSLCPGRLEKAQVVEALQEAAFFIMNGPVPAPERRTFRQNVFEGDEGE
Ga0182037_118419321	3300016404	Soil	PQLSSSYFLIVRISARALPMRIVVYDEAGDVVYDHHTQKGTISLFPGRLEKAQVVEALQEAAYFILDAPVPSPEGRTFRNHTFEGDDGE
Ga0182038_105410212	3300016445	Soil	MRVVVYDDTGDIACSYAPQRDTFSLCPGRLEKAKVVEALQEAAFFIMNGPVPAPECRTFRQNVFEGDEGE
Ga0182038_105985651	3300016445	Soil	LVVVYDDAGDIAFRFDTHKDTVSFCPGRLEKAHVVETLQEAAFFIMDGPVPSPDDRAYRPHVFEGDDGE
Ga0182038_115649963	3300016445	Soil	MMVVVYDDVGEVAFRFETQRDTVALCPGRLEKAHVVEALQEAAFFIMDRPSPPPDDRTYRQHSIDGDDGE
Ga0182038_118816201	3300016445	Soil	FDEADDVAFSYDTGRDTLALCPGRLEKAHVIEALQEAAFFIMDGPEPSPETRTFQRHVFESDEDVD
Ga0187802_100809992	3300017822	Freshwater Sediment	MRVVVYDEMDDVALDYDTRKDTLSRCPGRLEKAQVIEALQEAAFFIMDGPAPTPERRAFRHHVYEGDQGE
Ga0187820_12397151	3300017924	Freshwater Sediment	MRVVVYDETGEIALDYDTRSDTLSLCPGRLEKAQVVEALQEAAFFVIDGPAPTPEGRNFRQHVFEGDQGE
Ga0187801_102270642	3300017933	Freshwater Sediment	MRVVVYDEMDDVALDYDTRKDTLSLCPGRLEKAQVIEALQEAAFFIMDGPAPTPERRAFRHHVYEGDQGE
Ga0187808_104845581	3300017942	Freshwater Sediment	MRVVVYDEMDDVALDYDTRKDTLSLCPGRLEKAQVIEALQEAAFFIMDGPAPTPERRAF
Ga0187817_109034192	3300017955	Freshwater Sediment	MRVVVYDEAGEIALDYDTRSDTLSLCPGRLEKAQVVEGLQEAAFFVIDGPAPTPEGRNFRQHVFEGDQGE
Ga0187783_100373191	3300017970	Tropical Peatland	MRVLVYDEAGDVALDYQTQTDSVSLCPGRLEKAQVVEALQEAAFFIMDSPAPSPDGRNFRQHMSEGDEGE
Ga0187783_102480954	3300017970	Tropical Peatland	MRVVVYDDMGEIALDYRTKADTVSLCPGRLEKAQVVESLQEAAFFILDAPAPAPEGRTFRQNVYDG
Ga0187783_111326631	3300017970	Tropical Peatland	MRVIVHDEEGNVALDYDTRKDTLALCPGRLEKAQVIEALQEAAFFILDAPPPAPEGRTFRQHVYEGDQGE
Ga0187780_112217182	3300017973	Tropical Peatland	MRVVVYDAVGEIALDYYTQADSVSLCPGRLEKARVIEALQEAAFFIMDVPPPAPEGRIFRQHVFEGDDGE
Ga0187804_101704332	3300018006	Freshwater Sediment	MRVVVYDEMDDVALDYDTRKDTLSLCPGRLEKAQVIEALQEAAFFIMDAPAPSPEARNFRQHVFEGIRESD
Ga0187784_101111184	3300018062	Tropical Peatland	MLIIVYDDKGDTTFRFDTRKDTVSLCPGRLEKAHVVEALQEAAFFIMNGPAPAPDDPAYRQNIFEGDDGE
Ga0210407_105228471	3300020579	Soil	SYLLMLRSHHLRLGALPMRVVVYDEAGDIALDYYTKKDSVSLCPGRLEKAQVVEALQEAAFFIMDAPAPSPEGRNFRQLVFEGDQGE
Ga0210407_109921433	3300020579	Soil	MRVVVYDEAGEIALDYDTRSDTLSLCPGRLEKAQVVEALQEAAFFVIDGPAPTPEGRNFRQHVFEGDQGE
Ga0210407_112674931	3300020579	Soil	MRVVVYDVAGEIALDYDTRSDTLSLCPGRLEKAEVVEALQEAAFFVMDAPAPPPEGRNFREHVFEGDQGE
Ga0210395_104346343	3300020582	Soil	IVYDEAGDVAFDYYTQRDTISLCPGRLEKAQVVEALQEAAFFIMDAPAPSPEARNFRQHAFEGDHGE
Ga0210401_100565381	3300020583	Soil	MLVVVYDGTGDVAFRFDTKRDTVSLCPGRLEKAEVVEALQEAAFFIMDGPAPSPDGRAYRQHVFEGDNSE
Ga0210401_104084201	3300020583	Soil	MRVVVYDEAGEIALDYDTRSDTLSLCPGRLEKALVVEALHLCPGRLEKALVVEALQEAAFFVMDGPAPTPEGRNFREHIFEGDQGE
Ga0210401_106011272	3300020583	Soil	VYDVAGEIALDYDTRSDILSLCPGRLEKAQVFEALQEAAFFVMDAPAPPPEGRNFREHVFEGDQGE
Ga0210405_103536001	3300021171	Soil	LRSHHLRLGALPMRVVVYDEAGDIALDYYTKKDSVSLCPGRLEKAQVVEALQEAAFFIMDAPAPSPEGRNFRQLVFEGDQGE
Ga0210405_104431123	3300021171	Soil	MRVVVYDDTGDIACSYDRHRDTFSLCPGRLEKAQVVEALQEAAFFILNGPAPAPESRTFRQNVFEGDEGE
Ga0210408_107741301	3300021178	Soil	MRVVVYDVAGEIALDYDTRSDILSLCPGRLEKAQVVEALQEAAFFVMDAPAPPPEGRNFREHVFEGDQGE
Ga0210393_100587202	3300021401	Soil	MRVVVYDEAGEIALDYDTRRNTLSLCPGRLEKALVVEALQEAAFFVMDGPAPTPEGRNFREHIFEGDQGE
Ga0210383_102256582	3300021407	Soil	MRVIVYDEAGDVAFDYYTQGDTISLCPGRLEKAQVVEALQEAAFFIMDAPAPSPEARNFRQHAFEGDHGE
Ga0210394_103567211	3300021420	Soil	MRVVVYDEAGEIALDYDTRRDTLSLCPGRLEKAQVVEALQEAAFFVMDGPAPTPEGRNFREHILGG
Ga0210394_106798571	3300021420	Soil	MRVIVYDDAGDVAFDYYTQRDTISLCPGRLEKAQAVEALQEAAFLIMDAPAPSPEARNFRQHVFEGDHGE
Ga0210384_116924901	3300021432	Soil	EIALDYDTRRDTLSLCPGRLEKAQVVEALQEAAFFVMDGPAPTPEGRNFREHIFEGDQGE
Ga0210390_105289131	3300021474	Soil	MRVVVYDEAGEIALDYDTRSDTLSLCPGRLEKALVVEALQEAAFFVMDGPAPTPEGRNFREHIFEGDQGE
Ga0210390_111049902	3300021474	Soil	VDVKPLCVLGALPMRVVVYDEAGDVAFDFYTQKDTVSLCRARLEKAQVVEALQEAAFFIMDAPAPSPEARNFRQHVFEGDHGE
Ga0210390_114193311	3300021474	Soil	MRVVVYDEAGEIALDYDTRRDTLSLCPGRLEKALVVEALQEAAFFVMDGPAPTPEGRNFREHIFEGDQGE
Ga0210398_103653481	3300021477	Soil	MRVIVYDEAGDVAFDYYTQRDTISLCPGRLEKAQAVEALQEAAFLIMDAPAPSPEARNFRQHVFEGDHGE
Ga0126371_104743341	3300021560	Tropical Forest Soil	VLVVVYDDAGDIAFRFDTHKDTVSLCPGRLEKAHVVETLQEAAFLIMDGPVPSPDDRAYRPHVFEGDDGE
Ga0126371_116354492	3300021560	Tropical Forest Soil	IVVFDETDDVAFSYDTRRDTLALCPGRVEKAHVIEALQEAAFFIMDGPEPSPETRTFQRHVFESDEDVD
Ga0126371_129813371	3300021560	Tropical Forest Soil	MRVVVYDELGDAALDYNTHRDTISLCPGRLEKAQVIEALHEAAFFIMDAPAPTPEDRSFRQNIYEGDQGE
Ga0207690_106397041	3300025932	Corn Rhizosphere	MRVVVYDDAGDIACSYDLHKDTFSLCPGRLEKAQVVEALQEAAFFIMNGPAPAPESRTFRQNVFEGDEGE
Ga0207690_118506411	3300025932	Corn Rhizosphere	VALDYRTQINAVSLCPGRLEKAQVVEALQEAVLFVMDGPAPSPEERNFRQPEFVGDDGES
Ga0207665_103786231	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MRVVVYDEAGDIALDYYTKKDSVSLCPGRLEKAQVVEALQEAAFFIMDAPAPSPEGRNFRQLVFEGDQGE
Ga0207665_114359641	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MRVVVYDEAGEIALDYDTRRDTLSLCPGRLEKAQVVEALQEAAFFVMDGPAPTPEDRNF
Ga0209006_101355981	3300027908	Forest Soil	MRVIVYDDAGDVAFDYHTQKDTVSLCPGRLEKARVVEALQEAAFFILDAPAPSPEARNFRQHMFEGDHGE
Ga0265760_101742602	3300031090	Soil	MRVIVYDEAGDVAFDYYTQRDTNSLCPGRLEKAQVVEALQEAAFFIMDAPAPSPEARNFRQHVFEGDQGE
Ga0318541_108342691	3300031545	Soil	MRIVVYDEAGDVVYDHHTQKGTISLFPGRLEKAQVVEALQEAAYFILDAPVPSPEGRTFRNHTFEGDDGE
Ga0310915_102982421	3300031573	Soil	MRVLVYDELGDVALDYDTRTDMVPLCPGRLEKAQVVEALQEAAFFIMDAPAPAPEGRASRQRVFEGDDGE
Ga0318561_101995052	3300031679	Soil	MRIVVFDEADDVAFSYDTGRDTLALCPGRLEKAHVIEALQEAAFFIMDGPEPSPETRTFQRHVFESDEDVD
Ga0310686_10640458214	3300031708	Soil	MRVIVYDEAGDVAFDYYTQRDTISLCPGRLEKAQVVEALQEAAFFIMDAPVPSPEARNFRQHVFDGDHGE
Ga0306918_111120221	3300031744	Soil	MQIVVYDEAGDVVYDHHTQKGTISLFPGRLEKAQVVEALQEAAYFILDAPVPSPEGRTFRNHTFEGDDGE
Ga0318521_104943431	3300031770	Soil	LVVVYDDAGDIAFRFDTHKDTVSLCPGRLEKAHVVETLQEAAFFIMDGPVPSPDDRAYRPHVFEGDD
Ga0318546_105183012	3300031771	Soil	MRVLVYDELGDVALDYDTRTDMVPLCPGRLEKARVVEALQEAAFFIMDAPAPAPEGRASRQRVFEGDDGE
Ga0318546_106893401	3300031771	Soil	VLVVVYDDAGDIAFRFDTHKDTVSFCPGRLEKAHVVETLQEAAFFIMDGPVPSPDDRAYRPHVFEG
Ga0318547_110574981	3300031781	Soil	ALCRRNFSQAAFVDSNNAASSRTVRGALPMRVVVYDDTGDIACSYYPQRDTFSLCPGRLEKAQVVEALQEAAFFIMNGPVPAPESRTFRQNVFEGDEGE
Ga0306925_100913895	3300031890	Soil	MRVLVYDELGDVALDYDTRTDMVPLCPGRLEKAQVVEALQEAAFFIMDAPAPAPEGRTSRQRVFEGDDGE
Ga0306925_105337452	3300031890	Soil	MRVVVYDDTGDIACSYYPQRDTFSLCPGRLEKAQVVEALQEAAFFIMNGPVPAPESRTFRQNVFEGDEGE
Ga0306923_120406882	3300031910	Soil	MMVVVYDDVGEVAFRFETQRDTVALCPGRLEKAHVVEALQEAAFFIMDGPSPPPDDRTYRQHSIDGDDGE
Ga0306921_113764563	3300031912	Soil	ARALPMRIVVYDEAGDVVYDHHTQKGTISLFPGRLEKAQVVEALQEAAYFILDAPVPSPEGRTFRNHTFEGDDGE
Ga0306921_127149451	3300031912	Soil	MRIVVFDEADDVAFSYDTGRDTLALCPGRLEKAHVIEALQEAAFFIMDGAEPSPETRTFQRHVFESDEDVD
Ga0310916_108093181	3300031942	Soil	LVVVYDDAGDIAFRFDTHKDTVSLCPGRLEKAHVVETLQEAAFFIMDGPVPSPDDRAYRPHVFEGDDGE
Ga0310916_111641802	3300031942	Soil	MMVVVYDDVGEVAFRFDTQRDTVALCPGRLEKAHVVEALQEAAFFIMDGPSPPADDRTYRQHSIDGDDGE
Ga0310913_107713592	3300031945	Soil	MRVVVYDDTGDIACSYAPQRDTFSLCPGRLEKAKVVEALQEAAFFIMNGPVPAPESRTFRQNVFEGDEGE
Ga0310910_104466221	3300031946	Soil	SYLLIVRISARALPMRIVVYDEAGDVVYDHHTQKGTISLFPGRLEKAQVVEALQEAAYFILDAPVPSPEGRTFRNHTFEGDDGE
Ga0306926_119502431	3300031954	Soil	VLVVVYDDAGDIAFRFDTHKDTVSFCPGRLEKAHVVETLQEAAFFIMDGPVPSPDDRAYRPHVFEGDDGE
Ga0306926_126891751	3300031954	Soil	MRVVVYDAVGEIALDYYTQTDSVSLCPGRLEKAQVIEALQQAAFFIMDAPPPTPEGRTFRQHVFEGDDGE
Ga0306922_116941592	3300032001	Soil	MRVVVYDELGDAALDYNTHRDTISLCPGRLEKAQVIEALHEAAFFIMDAPAPTPEDRSFRQNIY
Ga0318533_109274961	3300032059	Soil	MMVVVYDDVGEVAFRFETQRDTVALCPDRLEKAHVVEALQEAAFFIMDGPSPPPDDRTYRQHSIDGDDGE
Ga0306924_107858051	3300032076	Soil	VLVVVYDDAGDIAFRFDTHKDTVSLCPGRLEKAHVVETLQEAAFFIMDGPVPSPDDRAYRPHVFEGDDGE
Ga0311301_101365116	3300032160	Peatlands Soil	MRVVVYDEVGGLALDYDTRRDTLSLCPGRLEKAQVIESLQEAAFFIMDAPAPSPEDRNFRQHVFEGDQGE
Ga0311301_102102453	3300032160	Peatlands Soil	MRVVVYDEAGDVAFDYHTQKDTVALCPGRLEKAQLVEALQESASFIMDAPAPSPEARNFRQHVFEGDQGE
Ga0311301_104246945	3300032160	Peatlands Soil	MRVVVYDETGEMTLDYDTRSDTLSLCPGRLEKAQVVESLQEAAFFVRPAPTPEGRNFRHHVFEGDQGE
Ga0311301_111711051	3300032160	Peatlands Soil	MRVVVYDEVGGVALDYDTQRDTLSLCPGRLEKAQVIEALQEAAFFIMDAPAPSPEARNFRQHVFEGD
Ga0306920_1036373461	3300032261	Soil	MRIVVYDETGQVALDHYTQKDTVSLCPGRMEKARVVEALQEAVFFIMDGPAPSPEGRNIRQVVFEGDDGE

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061185

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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