Metagenome / Metatranscriptome Family F061246

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061246
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	44 residues
Representative Sequence	FLAERHVGECPCRFDVMAIDNCPGQPPVVRLHKDAFSPQM
Number of Associated Samples	113
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.30 %
% of genes near scaffold ends (potentially truncated)	87.88 %
% of genes from short scaffolds (< 2000 bps)	87.12 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.576 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (18.182 % of family members)
Environment Ontology (ENVO)	Unclassified (33.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.242 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 14.71% Coil/Unstructured: 85.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF01087	GalP_UDP_transf	35.61
PF16268	DUF4921	12.12
PF02744	GalP_UDP_tr_C	6.82
PF00144	Beta-lactamase	3.79
PF00072	Response_reg	3.03
PF00202	Aminotran_3	3.03
PF11918	Peptidase_S41_N	1.52
PF02021	UPF0102	1.52
PF03466	LysR_substrate	1.52
PF16326	ABC_tran_CTD	0.76
PF00380	Ribosomal_S9	0.76
PF02621	VitK2_biosynth	0.76
PF01546	Peptidase_M20	0.76
PF00318	Ribosomal_S2	0.76
PF13529	Peptidase_C39_2	0.76
PF00990	GGDEF	0.76
PF03065	Glyco_hydro_57	0.76
PF13520	AA_permease_2	0.76
PF13683	rve_3	0.76
PF01509	TruB_N	0.76
PF01476	LysM	0.76
PF01425	Amidase	0.76
PF00126	HTH_1	0.76
PF00561	Abhydrolase_1	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	3.79
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	3.79
COG2367	Beta-lactamase class A	Defense mechanisms [V]	3.79
COG0792	Predicted endonuclease distantly related to archaeal Holliday junction resolvase, YraN/UPF0102 family	Replication, recombination and repair [L]	1.52
COG0052	Ribosomal protein S2	Translation, ribosomal structure and biogenesis [J]	0.76
COG0103	Ribosomal protein S9	Translation, ribosomal structure and biogenesis [J]	0.76
COG0130	tRNA U55 pseudouridine synthase TruB, may also work on U342 of tmRNA	Translation, ribosomal structure and biogenesis [J]	0.76
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.76
COG1427	Chorismate dehydratase (menaquinone biosynthesis, futalosine pathway)	Coenzyme transport and metabolism [H]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.58 %
Unclassified	root	N/A	42.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.58 %
Unclassified	root	N/A	42.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.58 %
Unclassified	root	N/A	42.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.42 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	25.00 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	6.06 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.79 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.42 %
unclassified Nitrospirae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae	6.06 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.30 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.03 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.52 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.42 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	6.06 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.79 %
Legionellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales	3.03 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.52 %
Candidatus Aerophobetes	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aerophobetes	0.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.42 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	6.06 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.79 %
Legionellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae	3.03 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.52 %
unclassified Aerophobetes	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aerophobetes → unclassified Aerophobetes	0.76 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.42 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	6.06 %
Legionella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella	3.03 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.52 %
Candidatus Aerophobetes bacterium Ae_b3a	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aerophobetes → unclassified Aerophobetes → Candidatus Aerophobetes bacterium Ae_b3a	0.76 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.76 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.76 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.42 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	6.06 %
Legionella pneumophila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella → Legionella pneumophila	3.03 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.52 %
Granulicella tundricola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella tundricola	0.76 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.76 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.76 %
Candidatus Aerophobetes bacterium Ae_b3a	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aerophobetes → unclassified Aerophobetes → Candidatus Aerophobetes bacterium Ae_b3a	0.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459002\|FZY7DQ102G2WY7	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300001593\|JGI12635J15846_10038309	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3759	Open in IMG/M
3300003223\|JGI26343J46809_1001884	All Organisms → cellular organisms → Bacteria	1500	Open in IMG/M
3300004092\|Ga0062389_102121341	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300004103\|Ga0058903_1450794	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300005177\|Ga0066690_10614932	All Organisms → cellular organisms → Bacteria → Acidobacteria	725	Open in IMG/M
3300005542\|Ga0070732_10162674	All Organisms → cellular organisms → Bacteria	1330	Open in IMG/M
3300005556\|Ga0066707_10604820	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300005559\|Ga0066700_10565592	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300005610\|Ga0070763_10910879	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300005712\|Ga0070764_10124891	All Organisms → cellular organisms → Bacteria	1396	Open in IMG/M
3300005952\|Ga0080026_10224484	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300006086\|Ga0075019_10730391	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300006172\|Ga0075018_10079165	All Organisms → cellular organisms → Bacteria	1423	Open in IMG/M
3300006755\|Ga0079222_10574345	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300006954\|Ga0079219_10095588	All Organisms → cellular organisms → Bacteria	1443	Open in IMG/M
3300007265\|Ga0099794_10201671	Not Available	1019	Open in IMG/M
3300007265\|Ga0099794_10667961	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	552	Open in IMG/M
3300009088\|Ga0099830_10695449	Not Available	837	Open in IMG/M
3300009137\|Ga0066709_103568296	Not Available	564	Open in IMG/M
3300009519\|Ga0116108_1008383	All Organisms → cellular organisms → Bacteria	4059	Open in IMG/M
3300009660\|Ga0105854_1382912	Not Available	509	Open in IMG/M
3300010046\|Ga0126384_10926379	All Organisms → cellular organisms → Bacteria → Acidobacteria	789	Open in IMG/M
3300010321\|Ga0134067_10007454	All Organisms → cellular organisms → Bacteria	3004	Open in IMG/M
3300010359\|Ga0126376_12859951	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300010360\|Ga0126372_11421417	All Organisms → cellular organisms → Bacteria → Acidobacteria	727	Open in IMG/M
3300010360\|Ga0126372_12483302	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	569	Open in IMG/M
3300010360\|Ga0126372_12562357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella → Legionella pneumophila	561	Open in IMG/M
3300010362\|Ga0126377_10296290	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1593	Open in IMG/M
3300012201\|Ga0137365_10468567	Not Available	927	Open in IMG/M
3300012202\|Ga0137363_10316105	Not Available	1285	Open in IMG/M
3300012202\|Ga0137363_11334329	Not Available	606	Open in IMG/M
3300012205\|Ga0137362_10083444	All Organisms → cellular organisms → Bacteria	2669	Open in IMG/M
3300012205\|Ga0137362_10218892	Not Available	1641	Open in IMG/M
3300012350\|Ga0137372_10013904	All Organisms → cellular organisms → Bacteria	7660	Open in IMG/M
3300012361\|Ga0137360_10283684	Not Available	1371	Open in IMG/M
3300012361\|Ga0137360_11252569	All Organisms → cellular organisms → Bacteria → Acidobacteria	641	Open in IMG/M
3300012918\|Ga0137396_11007989	All Organisms → cellular organisms → Bacteria → Acidobacteria	602	Open in IMG/M
3300012923\|Ga0137359_11458465	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	572	Open in IMG/M
3300012923\|Ga0137359_11522465	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	557	Open in IMG/M
3300012925\|Ga0137419_10585684	Not Available	895	Open in IMG/M
3300012927\|Ga0137416_10679167	Not Available	903	Open in IMG/M
3300012931\|Ga0153915_12887514	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
3300014166\|Ga0134079_10014791	All Organisms → cellular organisms → Bacteria → Acidobacteria	2436	Open in IMG/M
3300014199\|Ga0181535_10265282	Not Available	1032	Open in IMG/M
3300014655\|Ga0181516_10504046	Not Available	621	Open in IMG/M
3300015053\|Ga0137405_1278855	Not Available	1396	Open in IMG/M
3300015197\|Ga0167638_1021435	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1507	Open in IMG/M
3300015264\|Ga0137403_10157521	All Organisms → cellular organisms → Bacteria	2232	Open in IMG/M
3300015264\|Ga0137403_10560322	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1010	Open in IMG/M
3300016294\|Ga0182041_11690342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella → Legionella pneumophila	586	Open in IMG/M
3300017822\|Ga0187802_10164089	Not Available	850	Open in IMG/M
3300017934\|Ga0187803_10006251	All Organisms → cellular organisms → Bacteria	4720	Open in IMG/M
3300017934\|Ga0187803_10408134	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	551	Open in IMG/M
3300017940\|Ga0187853_10294318	Not Available	735	Open in IMG/M
3300017955\|Ga0187817_10028675	All Organisms → cellular organisms → Bacteria	3356	Open in IMG/M
3300017994\|Ga0187822_10059613	Not Available	1091	Open in IMG/M
3300018007\|Ga0187805_10136710	Not Available	1113	Open in IMG/M
3300018018\|Ga0187886_1157706	Not Available	898	Open in IMG/M
3300018085\|Ga0187772_10168175	All Organisms → cellular organisms → Bacteria → Acidobacteria	1459	Open in IMG/M
3300018433\|Ga0066667_11883718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella → Legionella pneumophila	544	Open in IMG/M
3300018468\|Ga0066662_11240630	Not Available	758	Open in IMG/M
3300018468\|Ga0066662_12573247	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	537	Open in IMG/M
3300019789\|Ga0137408_1382522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella → Legionella pneumophila	935	Open in IMG/M
3300019890\|Ga0193728_1142545	All Organisms → cellular organisms → Bacteria → Acidobacteria	1062	Open in IMG/M
3300020021\|Ga0193726_1000049	All Organisms → cellular organisms → Bacteria → Acidobacteria	236335	Open in IMG/M
3300020062\|Ga0193724_1125385	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300020199\|Ga0179592_10297130	Not Available	718	Open in IMG/M
3300020583\|Ga0210401_11012718	Not Available	689	Open in IMG/M
3300021088\|Ga0210404_10164535	Not Available	1171	Open in IMG/M
3300021168\|Ga0210406_10868806	Not Available	681	Open in IMG/M
3300021401\|Ga0210393_11602091	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300021420\|Ga0210394_10065358	Not Available	3155	Open in IMG/M
3300021420\|Ga0210394_11771429	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300021433\|Ga0210391_10189988	Not Available	1616	Open in IMG/M
3300021474\|Ga0210390_10149817	Not Available	1964	Open in IMG/M
3300021478\|Ga0210402_10939106	Not Available	792	Open in IMG/M
3300022557\|Ga0212123_10003889	All Organisms → cellular organisms → Bacteria	29957	Open in IMG/M
3300024288\|Ga0179589_10336161	Not Available	684	Open in IMG/M
3300025480\|Ga0208688_1005009	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4358	Open in IMG/M
3300025898\|Ga0207692_10363849	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300025922\|Ga0207646_11131438	Not Available	688	Open in IMG/M
3300026281\|Ga0209863_10234461	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300026297\|Ga0209237_1077305	Not Available	1539	Open in IMG/M
3300026319\|Ga0209647_1167108	Not Available	880	Open in IMG/M
3300026351\|Ga0257170_1064427	Not Available	516	Open in IMG/M
3300026377\|Ga0257171_1020398	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella tundricola	1116	Open in IMG/M
3300026469\|Ga0257169_1007334	Not Available	1318	Open in IMG/M
3300026496\|Ga0257157_1056935	Not Available	661	Open in IMG/M
3300026499\|Ga0257181_1020758	Not Available	975	Open in IMG/M
3300026552\|Ga0209577_10205515	Not Available	1510	Open in IMG/M
3300026557\|Ga0179587_10217956	Not Available	1213	Open in IMG/M
3300027173\|Ga0208097_1013130	Not Available	910	Open in IMG/M
3300027546\|Ga0208984_1015421	Not Available	1507	Open in IMG/M
3300027562\|Ga0209735_1036922	Not Available	1032	Open in IMG/M
3300027565\|Ga0209219_1132260	All Organisms → cellular organisms → Bacteria → Acidobacteria	606	Open in IMG/M
3300027591\|Ga0209733_1021123	All Organisms → cellular organisms → Bacteria	1757	Open in IMG/M
3300027660\|Ga0209736_1001948	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	6813	Open in IMG/M
3300027684\|Ga0209626_1156282	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	602	Open in IMG/M
3300027725\|Ga0209178_1153805	All Organisms → cellular organisms → Bacteria → Acidobacteria	795	Open in IMG/M
3300027727\|Ga0209328_10001626	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6268	Open in IMG/M
3300027795\|Ga0209139_10175747	Not Available	758	Open in IMG/M
3300027812\|Ga0209656_10062471	All Organisms → cellular organisms → Bacteria → Acidobacteria	2056	Open in IMG/M
3300027826\|Ga0209060_10342878	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	681	Open in IMG/M
3300027846\|Ga0209180_10778702	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300027879\|Ga0209169_10099632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1504	Open in IMG/M
3300027879\|Ga0209169_10143097	Not Available	1244	Open in IMG/M
3300027898\|Ga0209067_10706780	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aerophobetes → unclassified Aerophobetes → Candidatus Aerophobetes bacterium Ae_b3a	584	Open in IMG/M
3300028047\|Ga0209526_10286812	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300028747\|Ga0302219_10032293	All Organisms → cellular organisms → Bacteria → Acidobacteria	1955	Open in IMG/M
3300028906\|Ga0308309_10711688	Not Available	872	Open in IMG/M
3300030057\|Ga0302176_10239612	Not Available	726	Open in IMG/M
3300030399\|Ga0311353_10600183	All Organisms → cellular organisms → Bacteria → Acidobacteria	962	Open in IMG/M
3300030764\|Ga0265720_1005349	Not Available	754	Open in IMG/M
3300031057\|Ga0170834_112622704	Not Available	612	Open in IMG/M
3300031057\|Ga0170834_113780090	Not Available	870	Open in IMG/M
3300031446\|Ga0170820_17024064	Not Available	804	Open in IMG/M
3300031718\|Ga0307474_10970935	Not Available	672	Open in IMG/M
3300031753\|Ga0307477_10162982	All Organisms → cellular organisms → Bacteria	1554	Open in IMG/M
3300031754\|Ga0307475_10362179	All Organisms → cellular organisms → Bacteria → Acidobacteria	1165	Open in IMG/M
3300031754\|Ga0307475_10363622	All Organisms → cellular organisms → Bacteria	1163	Open in IMG/M
3300031754\|Ga0307475_10663854	Not Available	832	Open in IMG/M
3300031754\|Ga0307475_10999979	Not Available	657	Open in IMG/M
3300031823\|Ga0307478_10930456	All Organisms → cellular organisms → Bacteria → Acidobacteria	727	Open in IMG/M
3300031962\|Ga0307479_10083283	All Organisms → cellular organisms → Bacteria	3096	Open in IMG/M
3300031962\|Ga0307479_11695655	All Organisms → cellular organisms → Bacteria → Acidobacteria	586	Open in IMG/M
3300032174\|Ga0307470_10063563	All Organisms → cellular organisms → Bacteria → Acidobacteria	1956	Open in IMG/M
3300032180\|Ga0307471_100836846	Not Available	1087	Open in IMG/M
3300032180\|Ga0307471_101550206	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300032180\|Ga0307471_101818283	Not Available	760	Open in IMG/M
3300033561\|Ga0371490_1111274	Not Available	714	Open in IMG/M
3300034091\|Ga0326724_0418213	Not Available	706	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.09%
Aquatic	Environmental → Aquatic	15.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.30%
Freshwater	Environmental → Aquatic → Freshwater	12.88%
Peat	Environmental → Terrestrial → Peat	3.79%
Sediment	Environmental → Aquatic → Sediment	2.27%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.64%
Loam	Environmental → Terrestrial → Soil → Loam	13.64%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.88%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.79%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.27%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.12%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.33%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.06%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.79%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.27%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.27%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.52%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.76%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	9.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.33%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.55%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.55%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.79%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.03%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.27%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.27%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.52%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.52%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.52%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.52%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.52%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.52%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.52%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.76%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.76%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.76%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.76%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.76%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459002	Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cm	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300003223	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004103	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF242 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009660	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015197	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6B, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025480	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026351	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-B	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026469	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-B	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027173	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036 (SPAdes)	Environmental	Open in IMG/M
3300027546	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030764	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033561	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB28FN SIP fraction	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E1_07442770	2170459002	Grass Soil	MERHVKECPVRFDVVAIEEFPGQAPVVRLHKNAFRPRM
JGI12635J15846_100383091	3300001593	Forest Soil	MVVRTAQRFLAERHVRECPRRFDVVAIDNRPGSSPALRLHKDAFSPQL*
JGI26343J46809_10018842	3300003223	Bog Forest Soil	LWERRVPECPCRFDVVAIDNSPGKPPIVRLHKDAFSPQM*
Ga0062389_1021213411	3300004092	Bog Forest Soil	LFLMERRVPVCPCRFDVVAIDNEIGAAPVVRLHKDAFSPQM*
Ga0058903_14507941	3300004103	Forest Soil	FLSERHVGNCPCRFDVLAIDNRPGMTPEVRLHKDAFSPQM*
Ga0066690_106149322	3300005177	Soil	KQHVVARTAQRFLAERHVKDVSLRFDVLAIDNIPGSPPEVRLHKDAFSPQM*
Ga0070732_101626742	3300005542	Surface Soil	HVRDCPCRFDVVAIDNRPGSPPELRLHKDAFSPQL*
Ga0066707_106048201	3300005556	Soil	AQRFLAERHVKDIPLRFDVLAIDNIPGSPLEVRLHKDAFSPQM*
Ga0066700_105655922	3300005559	Soil	TPESPCRFDVVAIDNKPGQPPEVRLHKGAFSPQI*
Ga0070763_109108791	3300005610	Soil	RVRECPCRFDVVAIDNSPGKPPVVRLHKDAFSPEM*
Ga0070764_101248912	3300005712	Soil	ERRVAECPCRFDVVAIDNSPGKPPVVRLHKDAFSPQM*
Ga0080026_102244841	3300005952	Permafrost Soil	DCPTRFDVLAIDNVPGSHPVVRLHKDAFSPQWRRH*
Ga0075019_107303911	3300006086	Watersheds	VGECPCRFDVMAIDNCPGKAPVVRLHKDAFSPKT*
Ga0075018_100791651	3300006172	Watersheds	HVVVRTAQRFLAERHVGECPCRFDVMAIDNCPGQAPVVRLHKDAFSPQM*
Ga0079222_105743451	3300006755	Agricultural Soil	ERHVKKCPVRFDVVAIDNTPGKPPVVRLRKDALGPRA*
Ga0079219_100955881	3300006954	Agricultural Soil	RFLAERHVEECPLRFDVVAIDNHPGKPPVVRLHKDAFSPQLDRQF*
Ga0099794_102016712	3300007265	Vadose Zone Soil	PELSVTREKQSVVIRTAQRFPAERRPPESPCWFDVVAIDNIPWQPPVVRLHKDAFGPQM*
Ga0099794_106679612	3300007265	Vadose Zone Soil	FMAERHIKDCPLRFDVVAIEESPNGPPVVRLHKDAFHPVMQREI*
Ga0099830_106954492	3300009088	Vadose Zone Soil	VTKEKQHVVVRTAQRFLAERHVGEGPCRFDVLAIDNYPGQPPIVRLHKDAFSPQI*
Ga0066709_1035682961	3300009137	Grasslands Soil	ERHIRECPMRFDVVAIDNEPGRAPVVRLHKDAFSPQM*
Ga0116108_10083835	3300009519	Peatland	AHYFLRERHLKECPLRFDVVAIDNTPGQPPAVRLHKAALSPQA*
Ga0105854_13829121	3300009660	Permafrost Soil	DCPTRFDVLAIDNIPGQSPVVCLHKDAFSPQLRR*
Ga0126384_109263792	3300010046	Tropical Forest Soil	TAKYFLSERHVRECPMRFDVLAIDNEPGRSPVVRLHKDAFSPQMR*
Ga0134067_100074541	3300010321	Grasslands Soil	AERHVEECPLRFDVVAIDNLPGKPPVVRLHKDAFSPQLDRQY*
Ga0126376_128599511	3300010359	Tropical Forest Soil	KQRVLVRTAQRFLAERHVAECPCRFDVLAIDNRPGQPPIVCLHKDAFSPDLGRRD*
Ga0126372_114214172	3300010360	Tropical Forest Soil	AERHVKERSIRFDVLAIDNIPGRPPEVRLHKDAFSPQMY*
Ga0126372_124833021	3300010360	Tropical Forest Soil	TAKRFLAERHVRDCPMRFDVVAIDNEPGRPPVVRLNKDALSPQM*
Ga0126372_125623571	3300010360	Tropical Forest Soil	RTAQRFLAERHVKDGAIRFDVLAIDNIPGSPPEVRLHKDAFSPQM*
Ga0126377_102962901	3300010362	Tropical Forest Soil	AQRFLSERHVKGTPLRFDGLAIDNLPGGPPEVRLHKDAFSPQI*
Ga0137365_104685671	3300012201	Vadose Zone Soil	QRFLAERHVGESPCRFDVLAIDNYPGQPPIVRLHKDAFSPQI*
Ga0137363_103161052	3300012202	Vadose Zone Soil	MERHVKECPLRFDVVAIEEFPGQSPVVRLHKNAFNPRI*
Ga0137363_113343291	3300012202	Vadose Zone Soil	TAQRFLAERHIGDGPLRFDVLAIDNQPGHSPAVRLHKDAFSPQL*
Ga0137362_100834441	3300012205	Vadose Zone Soil	VTEKQHVVARTARRFPAERHVKDIPLRFDVLAIDNIHGGPPEVRLHKDAFSPQI*
Ga0137362_102188921	3300012205	Vadose Zone Soil	ERHVGESPCRFDVLAIDNYPGQPPIVRLHKDAFSPQI*
Ga0137372_100139041	3300012350	Vadose Zone Soil	RFLAERHVGEGPCRFDVLAIDNYPGQPPIVRLHKDAFSPQI*
Ga0137360_102836841	3300012361	Vadose Zone Soil	VGECPCRFDVMAIDNCPGQPPVVRLHKDAFSPQM*
Ga0137360_112525691	3300012361	Vadose Zone Soil	MERHVKECPLRFDVVAIEEFPGQSPVVRLHQNAFNPR
Ga0137396_110079892	3300012918	Vadose Zone Soil	VKKCPVRFDVVAIDNTPGKPPVVRLHKDALSPRA*
Ga0137359_114584652	3300012923	Vadose Zone Soil	AERHIKDCPLRFDVVAIEESPNGPPVVRLHKDAFHPVMQREM*
Ga0137359_115224652	3300012923	Vadose Zone Soil	AQRFLAERRTPESPYRFDVVAIDNKPGQPPEVRLHKDAFSPQM*
Ga0137419_105856841	3300012925	Vadose Zone Soil	EKQLLVVCTAQRFLAERQGECPGRFDVMAIDNCPGQPPVVRLHKDAFSPQV*
Ga0137416_106791672	3300012927	Vadose Zone Soil	VVIRTAQRFIAERHIGDGPLRFDVLAIDNQPGHSPAVRLHKDAFSPQL*
Ga0153915_128875141	3300012931	Freshwater Wetlands	TAQVFLAGRRVPETVVRFDVLAIENHPGRAPVVRLHKDAFPAHL*
Ga0134079_100147911	3300014166	Grasslands Soil	ECPLRFDVVAIDNHPGKPPVVRLHKDAFSPQLDRQY*
Ga0181535_102652821	3300014199	Bog	RERHLKECPVRFDVVAIDNIPGQPPAVRLHKAALSPRA*
Ga0181516_105040462	3300014655	Bog	RRVKAGPVRFDVVAIDNEMGRAPEVRLHKDAFSPEV*
Ga0137405_12788551	3300015053	Vadose Zone Soil	KQHVVVRTAQRFLAERHVGECPCRFDVMAIDNCPGQPPVVRLHKDAFSPQM*
Ga0167638_10214351	3300015197	Glacier Forefield Soil	RHPKNDTCRFDVLAIDNHPGMPPVVRLHKDAFSPQL*
Ga0137403_101575213	3300015264	Vadose Zone Soil	MERHVKGCPVRFDVVAIEESHGQPPLVRLHKNAFNPRM*
Ga0137403_105603221	3300015264	Vadose Zone Soil	MERHVKECPLRFDVVAIEEFPGQSPVVRLHKNAFNPRM*
Ga0182041_116903422	3300016294	Soil	ARRFLAERHIKDTPLRFDVLAIDNIPGRPPEVRLHKDAFSPHL
Ga0187802_101640891	3300017822	Freshwater Sediment	RTSKRFLAERHTGECPCRFDVLAIDNRPGQPPLVRLHKDAFSPQV
Ga0187803_100062516	3300017934	Freshwater Sediment	FLAERHVGDCPCRFDVLAIDNRPGHAPVVRLHKDAFSPQS
Ga0187803_104081342	3300017934	Freshwater Sediment	EHVLVRTAKRFLAERHTGECPCRFDVLAIDNRPGQPPLVRLHKDAFSPQV
Ga0187853_102943181	3300017940	Peatland	HYFLRERHLKECPVRFDVVAIDNIPGQPPAVRLHKAALSPRA
Ga0187817_100286751	3300017955	Freshwater Sediment	TAHYFLRERHIQPCPLRFDVVALENTPGQPPVVRLHKAALSPQLPVFAR
Ga0187822_100596131	3300017994	Freshwater Sediment	AKHFLMERHVKECPMRFDVVAIDEMSGRAPEVRLHKAAFSPQM
Ga0187805_101367102	3300018007	Freshwater Sediment	LRTAHYFLRERHIQPCPLRFDVVAIENTPGQPPVVRLHKAALSPQLPVFAR
Ga0187886_11577061	3300018018	Peatland	RTAHYFLRERHLKECPLRFDVVAIDNTPGQPPAVRLHKAALSPQA
Ga0187772_101681751	3300018085	Tropical Peatland	RHISPCPVRFDVIAIDNLPGHPPVVRLHKAALPPIIN
Ga0066667_118837182	3300018433	Grasslands Soil	QHVVARTAQRFLAERHVKDIPLRFDVLAIDNIPGSPLEVRLHKDAFSPQM
Ga0066662_112406301	3300018468	Grasslands Soil	QHVVIRTAQRFLAEHRVRECPCRFDVVAIDNRPGQPPMVRLHKDAFGPQV
Ga0066662_125732471	3300018468	Grasslands Soil	ERRAGDNPVRFDVLAIDNRPGRPPEVRLHKDAFSSQI
Ga0137408_13825222	3300019789	Vadose Zone Soil	QHVVARTARRFPAERHVKDIPLRFDVLAIDNIHGGPPEVRLHKDAFSPQI
Ga0193728_11425453	3300019890	Soil	ADRHLSDCPCRFDVLAIDNIPGQLPAVRLHKDAFSPQLH
Ga0193726_1000049130	3300020021	Soil	MLIRTARRFLADRRISDGRARFDVLAIDNVPGHPPNVRLHKDAFGPQLRR
Ga0193724_11253852	3300020062	Soil	MLVRTAQRFLADRHLHDCPTCFDVLAIDNIPGRPPEIRLHKDAFSPQLRRSR
Ga0179592_102971302	3300020199	Vadose Zone Soil	FLAERHVGECPMRFDVVAIDNEPGHPPVVRLHKDAFSPQM
Ga0210401_110127182	3300020583	Soil	LVERRVPECPCRFDVVAIDNSPGKPPVVRLHKDAFSPQK
Ga0210404_101645352	3300021088	Soil	FLAERHVGECPCRFDVMAIDNCPGQPPVVRLHKDAFSPKM
Ga0210406_108688062	3300021168	Soil	AERHVRECPLRFDVVAIDNEPGHPPVVRLHKDAFSPQM
Ga0210393_116020911	3300021401	Soil	LSVTRGKQHLLARTAQHFLAERRVRECPRRFDAVAIDNSPGKPPGVRLHKDAFSPQM
Ga0210394_100653584	3300021420	Soil	YFLRERHIGECPMRFDVVAIDNAPGRLPLVRLHKDALSPRV
Ga0210394_117714291	3300021420	Soil	RHVGDCPCRFDVLAIDNRPGMPPEVRLHKDAFSPQMS
Ga0210391_101899881	3300021433	Soil	LASRHLNDCPTRFDALAIDNIPGRPPEIRLHKDAFSPQLRRSR
Ga0210390_101498173	3300021474	Soil	RTARRFLGERHVGDCPCRFDVLAIDNRPGMPPEVRLHKDAFSPQIS
Ga0210402_109391061	3300021478	Soil	LAERHVSNRPCRFDVLAIDNHPGHAPAVRLHKDAFSPQL
Ga0212123_1000388927	3300022557	Iron-Sulfur Acid Spring	MDRHLRDCPTRFDVLAIDNIPGRPPKIRLHKDAFSPQIRRSR
Ga0179589_103361612	3300024288	Vadose Zone Soil	FLAERHIGDGPLRFDVLAIDNQPGHAPAVRLHKDAFSPQL
Ga0208688_10050091	3300025480	Peatland	AHYFLRERHLKECPLRFDVVAIDNTPGQPPAVRLHKAALSPQA
Ga0207692_103638491	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	AEKQHVVARTARRFLAERHVKDVPLRFDVLAINNIPASPPEVRLHKDAFSPQI
Ga0207646_111314382	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VIRAARRFPGERHVRDCPCRFDVPAIDNRPGMPPEVRLHKDAFSPQM
Ga0209863_102344612	3300026281	Prmafrost Soil	AERRVKESACRFDVLAIDNHPGLPPEVRLHKDAFSPQM
Ga0209237_10773051	3300026297	Grasslands Soil	RVLVRTAQRFLRERRAGDNPVRFDVLAIDNRPGRPPEVRLHKDAFSSQI
Ga0209647_11671082	3300026319	Grasslands Soil	RRFMAERHIKDCPLRFDVVAIEESPNGPPVVRLHKDAFHPVMPREM
Ga0257170_10644271	3300026351	Soil	ITREKQHLVVRTAQRFLAERHVGECPCRFDVMAIDNCLGQPPVVRLHKDAFSPQI
Ga0257171_10203981	3300026377	Soil	RHVKKCPVRFDVVAIDNTPGKPPVVRLHKDALSRRA
Ga0257169_10073341	3300026469	Soil	LMERHVEECPVRFAVVAIEEFSGQAPVVRLHKNAFNPRM
Ga0257157_10569351	3300026496	Soil	FLAERHVGECPCRFDVMAIDNCPGQPPVVRLHKDAFSPQM
Ga0257181_10207582	3300026499	Soil	QRIVIRTAQRFLAERRTPESPYRFDVVAIDNKPGQPPEVRLHKDAFSPQM
Ga0209577_102055153	3300026552	Soil	TREKQHVVVRTAQRFLAERHVGECPCRFDVTADVTAMDNCPGQPPVVRLHKDAFSPQV
Ga0179587_102179561	3300026557	Vadose Zone Soil	FLADRHVSNRPCRFDVLAIDNHPGHSPAVRLHKDAFSPQL
Ga0208097_10131301	3300027173	Forest Soil	KQHLVVRTAQRFLAERHIGDCSCRFDVVAIDNRAGQPPVARLHKDAFSPQI
Ga0208984_10154213	3300027546	Forest Soil	GLPELSVSYARQSVLVRTAQRFLADRHLRDCPMRLDVLAIDNIPGRPPEIRLHKDA
Ga0209735_10369221	3300027562	Forest Soil	HDCPTRFDVLAIDNIPRRPPEIRPHKDAFSPQWRGSR
Ga0209219_11322602	3300027565	Forest Soil	RLVIRTAQRFIAERHINTDPCRFDVLAIDNQPGHSPEVRLHKDAFSAQL
Ga0209733_10211231	3300027591	Forest Soil	SVTTDKQRVVIRTAQRFLAERHVSSDSCRFDVLAIDNHPGHAPEVRLHKDAFSPQL
Ga0209736_10019485	3300027660	Forest Soil	MVVRTAQRFLAERHVRECPRRFDVVAIDNRPGSSPALRLHKDAFSPQL
Ga0209626_11562822	3300027684	Forest Soil	LVHTAQRFLADRHLHDSPTRFDVLAIDNIPGRPPEIRLHKDAFSPQLRRSR
Ga0209178_11538051	3300027725	Agricultural Soil	RTARRFLAERHVKDCPCRFDVVAIDNSPGRPPEVRLHKDAFSPQFRRPF
Ga0209328_100016262	3300027727	Forest Soil	VLVRTAQRFLADRQLHDCTTRFDVLAIDNILGHQLEIRLHKDAFSPQLRRSR
Ga0209139_101757471	3300027795	Bog Forest Soil	ARTAKLFLMERRVAVCPCRFDVVAIDNEVGRPPVVRLHKDAFSPQM
Ga0209656_100624714	3300027812	Bog Forest Soil	VTPGKQHVLARTAQHFLAERRVPECPCRFDVVAIDNVSGKPPLLRLHKDASSPQM
Ga0209060_103428781	3300027826	Surface Soil	ERHMPELPCRFDVVAIDNEPGRPPELRLHKDAFSPQLRE
Ga0209180_107787022	3300027846	Vadose Zone Soil	SITTDKQRLVTRTAQRFLAERHVGDGPLRFDVLAIDNKPGHSPAVRLHKDAFSPQL
Ga0209169_100996323	3300027879	Soil	QRLVVRTALRFLGERHVKECPCRFDVVAIDNYMGMPPELRLHKDAFSAHIDHW
Ga0209169_101430972	3300027879	Soil	ERRVAECPCRFDVVAIDNSPGKPPVVRLHKDAFSPQM
Ga0209067_107067802	3300027898	Watersheds	HLVVRTAQRFLAERHVGECPCRFDVMAIDNCPGKAPVVRLHKDAFSPKT
Ga0209526_102868121	3300028047	Forest Soil	MHGDRVVVRTAWRFLSERHVGNCPCRFDVLAIDNRPGMTPEVRLHKDAFSPQM
Ga0302219_100322931	3300028747	Palsa	FLRERRIKSDCPLRFDVVAIDNEIGRSPIVRLHKDAFSPQV
Ga0308309_107116882	3300028906	Soil	GERHVKECPCRFDVVAIDNRVGAPPEIRLHKDAFSPQLKAW
Ga0302176_102396122	3300030057	Palsa	MHERRVKAGPVRFDVVAIDNEIGRAPEVRLHKDAFSPEV
Ga0311353_106001832	3300030399	Palsa	KQQMLVRTAKLFMHERRVKAGPVRFDVVAIDNEIGRAPEVRLHKDAFSPEV
Ga0265720_10053491	3300030764	Soil	HVLARTAQHFLAERRVPECPCRFDVVAIDNSPGKPPVVRLHKDAFSPQM
Ga0170834_1126227041	3300031057	Forest Soil	RHVKEGPVRFDGVAIEELPGQAPLVRLHKNAFNPRI
Ga0170834_1137800901	3300031057	Forest Soil	REKQHVVVRTAQRFLAERHVGECPCRFDVMAIDNCPGQPPVVRLHKDAFSPRV
Ga0170820_170240642	3300031446	Forest Soil	HVKKCPVRFDVVAIDDTPGKPPLVRLHRDALSPRA
Ga0307474_109709352	3300031718	Hardwood Forest Soil	AKMFLMERRMKECPCRFDVLAIDNEIGRAPVVRLHKDAFSPQM
Ga0307477_101629823	3300031753	Hardwood Forest Soil	RVVARTAQRFLAERHVSNRPCRFDVLAIDNHPGHAPAVRLHKDAFSPQL
Ga0307475_103621791	3300031754	Hardwood Forest Soil	VRTAQLFLASRHLNDCPTRFDVLAIDNILGRPPEIRLHKDAFSPPLRRSR
Ga0307475_103636223	3300031754	Hardwood Forest Soil	DKQRVVVRTARRFLSERHAGNCPCRFDVLAIDNRPGMTPEVRLHKDAFSPQM
Ga0307475_106638542	3300031754	Hardwood Forest Soil	LAERHVSDRPCRFDVLAIDNHPGHAPAVRLHKDAFSPQL
Ga0307475_109999792	3300031754	Hardwood Forest Soil	RTAQRFLAERHVSNRPCRFDVLAIDNRPGHSPAVRLHKDAFSPQL
Ga0307478_109304561	3300031823	Hardwood Forest Soil	VLVCTAQRFLADRHLNDCPTRFDVLAIDNIPGHPPQIRLHKDTFSPQLRRSR
Ga0307479_100832836	3300031962	Hardwood Forest Soil	ARTAQRFLAERHVSDRPCRFDVLAIDNRPGRSPAVRLHKDAFSPQL
Ga0307479_116956551	3300031962	Hardwood Forest Soil	QHLVVRTAQRFMAERHVGECPCRFDVMAIDNRPGKAPVVRLHKDAFSPKM
Ga0307470_100635633	3300032174	Hardwood Forest Soil	MERHVKECPLRFDVVAIEEFPGQSPVVRLHKNAFNPRM
Ga0307471_1008368462	3300032180	Hardwood Forest Soil	HAGDCPCRFDVLAIDNCPGHPPAVRLHKDAFSPQQ
Ga0307471_1015502062	3300032180	Hardwood Forest Soil	MSIWAKRFLAERHVKDIPLRFDVLAIDNIPGSPPEVRLHKDAFSPQM
Ga0307471_1018182832	3300032180	Hardwood Forest Soil	KQRVVIRTAQRFLAERRAPESPYRFDVVAIDNKPGQPPTVRLHKDAFSPQM
Ga0371490_11112741	3300033561	Peat Soil	AHYFLRERHLKECPLRFDVVAIDNTPGKAPIVRLHKAALSPRA
Ga0326724_0418213_1_114	3300034091	Peat Soil	ERHLKECPVRFDVVAIDNTPGQAPVVRLHKAALSPRA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061246

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences