Metagenome / Metatranscriptome Family F061247

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F061247
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	73 residues
Representative Sequence	MYGQVIFHRRPDPSLKAAEVSFRLASGTKWRLAERRVAMVRLLVKVRHQQWVRAESAKAYRPPTLLEDNPTSG
Number of Associated Samples	95
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	89.39 %
% of genes near scaffold ends (potentially truncated)	12.88 %
% of genes from short scaffolds (< 2000 bps)	91.67 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (70.455 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.424 % of family members)
Environment Ontology (ENVO)	Unclassified (32.576 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.576 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.53% β-sheet: 0.00% Coil/Unstructured: 53.47%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF13875	DUF4202	3.79
PF08238	Sel1	2.27
PF17124	ThiJ_like	1.52
PF07647	SAM_2	0.76
PF04226	Transgly_assoc	0.76
PF00196	GerE	0.76
PF08734	GYD	0.76
PF00982	Glyco_transf_20	0.76
PF01329	Pterin_4a	0.76
PF02586	SRAP	0.76
PF13592	HTH_33	0.76
PF01545	Cation_efflux	0.76
PF00211	Guanylate_cyc	0.76
PF13439	Glyco_transf_4	0.76
PF05598	DUF772	0.76
PF01058	Oxidored_q6	0.76
PF00067	p450	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.76
COG0377	NADH:ubiquinone oxidoreductase 20 kD subunit (chain B) or related Fe-S oxidoreductase	Energy production and conversion [C]	0.76
COG0380	Trehalose-6-phosphate synthase, GT20 family	Carbohydrate transport and metabolism [G]	0.76
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.76
COG1740	Ni,Fe-hydrogenase I small subunit	Energy production and conversion [C]	0.76
COG1941	Coenzyme F420-reducing hydrogenase, gamma subunit	Energy production and conversion [C]	0.76
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.76
COG2124	Cytochrome P450	Defense mechanisms [V]	0.76
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.76
COG2154	Pterin-4a-carbinolamine dehydratase	Coenzyme transport and metabolism [H]	0.76
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.76
COG3260	Ni,Fe-hydrogenase III small subunit	Energy production and conversion [C]	0.76
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.76
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.45 %
All Organisms	root	All Organisms	29.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.45 %
cellular organisms	root	All Organisms → cellular organisms	29.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.45 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	29.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.21 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.76 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.45 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	17.42 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.76 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.45 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.76 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.45 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.52 %
Roseiarcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae	0.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.76 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.76 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.76 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.45 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.52 %
Roseiarcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus	0.76 %
Rhizobiales bacterium GAS188	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	0.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.76 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.76 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.45 %
Roseiarcus fermentans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	0.76 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.76 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.76 %
Rhizobiales bacterium GAS188	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	0.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.76 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.76 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.45 %
Bradyrhizobium sp. th.b2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	0.76 %
Roseiarcus fermentans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	0.76 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.76 %
Rhizobiales bacterium GAS188	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	0.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.76 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.76 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459010\|GIO7OMY02GMBSH	Not Available	515	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104757775	Not Available	520	Open in IMG/M
3300001471\|JGI12712J15308_10197953	Not Available	528	Open in IMG/M
3300002245\|JGIcombinedJ26739_100442470	Not Available	1177	Open in IMG/M
3300003219\|JGI26341J46601_10020123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2185	Open in IMG/M
3300003219\|JGI26341J46601_10070582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1057	Open in IMG/M
3300003368\|JGI26340J50214_10168884	Not Available	545	Open in IMG/M
3300003505\|JGIcombinedJ51221_10165080	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300004082\|Ga0062384_100902732	Not Available	625	Open in IMG/M
3300004091\|Ga0062387_100472423	Not Available	867	Open in IMG/M
3300004092\|Ga0062389_100716203	Not Available	1175	Open in IMG/M
3300004152\|Ga0062386_100670687	Not Available	850	Open in IMG/M
3300004152\|Ga0062386_100820625	Not Available	767	Open in IMG/M
3300004152\|Ga0062386_101129425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	651	Open in IMG/M
3300004635\|Ga0062388_100221959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1512	Open in IMG/M
3300005434\|Ga0070709_10388990	Not Available	1039	Open in IMG/M
3300005591\|Ga0070761_10475214	Not Available	769	Open in IMG/M
3300005602\|Ga0070762_10797715	Not Available	639	Open in IMG/M
3300005610\|Ga0070763_10577679	Not Available	650	Open in IMG/M
3300006047\|Ga0075024_100820607	Not Available	522	Open in IMG/M
3300006050\|Ga0075028_100451017	Not Available	744	Open in IMG/M
3300006052\|Ga0075029_100208620	All Organisms → cellular organisms → Bacteria → Proteobacteria	1222	Open in IMG/M
3300006052\|Ga0075029_100290848	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1041	Open in IMG/M
3300006052\|Ga0075029_100479373	Not Available	819	Open in IMG/M
3300006052\|Ga0075029_100526878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	783	Open in IMG/M
3300006059\|Ga0075017_101416694	Not Available	547	Open in IMG/M
3300006059\|Ga0075017_101554254	Not Available	522	Open in IMG/M
3300006102\|Ga0075015_101009557	Not Available	510	Open in IMG/M
3300006172\|Ga0075018_10036458	Not Available	1992	Open in IMG/M
3300006172\|Ga0075018_10652137	Not Available	565	Open in IMG/M
3300006172\|Ga0075018_10802719	Not Available	516	Open in IMG/M
3300006175\|Ga0070712_101636164	Not Available	563	Open in IMG/M
3300006176\|Ga0070765_102220285	Not Available	512	Open in IMG/M
3300006354\|Ga0075021_10702749	Not Available	650	Open in IMG/M
3300009522\|Ga0116218_1385859	Not Available	625	Open in IMG/M
3300009523\|Ga0116221_1421115	Not Available	582	Open in IMG/M
3300009525\|Ga0116220_10427280	Not Available	595	Open in IMG/M
3300009683\|Ga0116224_10396967	Not Available	656	Open in IMG/M
3300009698\|Ga0116216_10250715	Not Available	1082	Open in IMG/M
3300009839\|Ga0116223_10676514	Not Available	593	Open in IMG/M
3300010154\|Ga0127503_10135425	Not Available	594	Open in IMG/M
3300010154\|Ga0127503_10850230	Not Available	690	Open in IMG/M
3300010154\|Ga0127503_10939020	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	877	Open in IMG/M
3300010339\|Ga0074046_10332249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	928	Open in IMG/M
3300010341\|Ga0074045_10421423	Not Available	864	Open in IMG/M
3300010341\|Ga0074045_10729251	Not Available	628	Open in IMG/M
3300010343\|Ga0074044_10033578	All Organisms → cellular organisms → Bacteria → Proteobacteria	3595	Open in IMG/M
3300010343\|Ga0074044_10091168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2054	Open in IMG/M
3300010379\|Ga0136449_101082804	Not Available	1278	Open in IMG/M
3300011120\|Ga0150983_10497856	Not Available	573	Open in IMG/M
3300012177\|Ga0153943_1036291	Not Available	1060	Open in IMG/M
3300012202\|Ga0137363_10233999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1488	Open in IMG/M
3300012924\|Ga0137413_10176389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1419	Open in IMG/M
3300012924\|Ga0137413_10444922	Not Available	942	Open in IMG/M
3300012989\|Ga0164305_11161604	Not Available	667	Open in IMG/M
3300014169\|Ga0181531_10349832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	906	Open in IMG/M
3300014199\|Ga0181535_10437022	Not Available	763	Open in IMG/M
3300014200\|Ga0181526_10554190	Not Available	727	Open in IMG/M
3300016387\|Ga0182040_11431473	Not Available	586	Open in IMG/M
3300017822\|Ga0187802_10384741	Not Available	554	Open in IMG/M
3300017943\|Ga0187819_10461187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	727	Open in IMG/M
3300017946\|Ga0187879_10522678	Not Available	658	Open in IMG/M
3300017955\|Ga0187817_10037947	All Organisms → cellular organisms → Bacteria	2940	Open in IMG/M
3300017995\|Ga0187816_10451679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	575	Open in IMG/M
3300018038\|Ga0187855_10938627	Not Available	504	Open in IMG/M
3300020579\|Ga0210407_10373674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1115	Open in IMG/M
3300020579\|Ga0210407_10533697	Not Available	916	Open in IMG/M
3300020579\|Ga0210407_11175319	Not Available	578	Open in IMG/M
3300020580\|Ga0210403_11004786	Not Available	652	Open in IMG/M
3300020581\|Ga0210399_10599243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	912	Open in IMG/M
3300020581\|Ga0210399_11143568	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300020582\|Ga0210395_11431842	Not Available	504	Open in IMG/M
3300020583\|Ga0210401_11526292	Not Available	525	Open in IMG/M
3300021168\|Ga0210406_10208863	All Organisms → cellular organisms → Bacteria	1617	Open in IMG/M
3300021168\|Ga0210406_10565473	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300021171\|Ga0210405_11099902	Not Available	594	Open in IMG/M
3300021181\|Ga0210388_10952731	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300021401\|Ga0210393_10352519	Not Available	1198	Open in IMG/M
3300021404\|Ga0210389_10968499	Not Available	661	Open in IMG/M
3300021407\|Ga0210383_11269584	Not Available	617	Open in IMG/M
3300021432\|Ga0210384_10954180	Not Available	759	Open in IMG/M
3300021475\|Ga0210392_10894118	Not Available	664	Open in IMG/M
3300021477\|Ga0210398_10556513	Not Available	933	Open in IMG/M
3300021478\|Ga0210402_10370120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1330	Open in IMG/M
3300022527\|Ga0242664_1152428	Not Available	511	Open in IMG/M
3300027117\|Ga0209732_1100774	Not Available	502	Open in IMG/M
3300027692\|Ga0209530_1021946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1925	Open in IMG/M
3300027727\|Ga0209328_10228623	Not Available	558	Open in IMG/M
3300027783\|Ga0209448_10017937	Not Available	2315	Open in IMG/M
3300027812\|Ga0209656_10021503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	3937	Open in IMG/M
3300027812\|Ga0209656_10226271	Not Available	895	Open in IMG/M
3300027812\|Ga0209656_10366680	Not Available	652	Open in IMG/M
3300027824\|Ga0209040_10052643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2445	Open in IMG/M
3300027824\|Ga0209040_10146848	All Organisms → cellular organisms → Bacteria → Proteobacteria	1278	Open in IMG/M
3300027824\|Ga0209040_10283180	All Organisms → cellular organisms → Bacteria → Proteobacteria	815	Open in IMG/M
3300027824\|Ga0209040_10410226	Not Available	627	Open in IMG/M
3300027825\|Ga0209039_10029568	Not Available	2658	Open in IMG/M
3300027908\|Ga0209006_10202765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1722	Open in IMG/M
3300027908\|Ga0209006_10857960	Not Available	732	Open in IMG/M
3300027911\|Ga0209698_10780967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	723	Open in IMG/M
3300030494\|Ga0310037_10022513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3042	Open in IMG/M
3300030741\|Ga0265459_13625679	Not Available	541	Open in IMG/M
3300030843\|Ga0075392_10862367	Not Available	689	Open in IMG/M
3300030973\|Ga0075395_11102813	Not Available	525	Open in IMG/M
3300031057\|Ga0170834_100217391	Not Available	609	Open in IMG/M
3300031057\|Ga0170834_106323460	Not Available	630	Open in IMG/M
3300031057\|Ga0170834_108037777	Not Available	516	Open in IMG/M
3300031057\|Ga0170834_110706902	Not Available	643	Open in IMG/M
3300031128\|Ga0170823_12922267	Not Available	699	Open in IMG/M
3300031128\|Ga0170823_15454183	Not Available	689	Open in IMG/M
3300031128\|Ga0170823_16946759	Not Available	502	Open in IMG/M
3300031231\|Ga0170824_105238227	Not Available	818	Open in IMG/M
3300031231\|Ga0170824_107898628	Not Available	601	Open in IMG/M
3300031231\|Ga0170824_112329359	Not Available	691	Open in IMG/M
3300031231\|Ga0170824_121720790	Not Available	1651	Open in IMG/M
3300031446\|Ga0170820_14509112	Not Available	1250	Open in IMG/M
3300031446\|Ga0170820_16452838	Not Available	509	Open in IMG/M
3300031708\|Ga0310686_106498000	Not Available	866	Open in IMG/M
3300032160\|Ga0311301_10721545	All Organisms → cellular organisms → Bacteria	1394	Open in IMG/M
3300032160\|Ga0311301_12998662	Not Available	508	Open in IMG/M
3300032180\|Ga0307471_103410441	Not Available	563	Open in IMG/M
3300032515\|Ga0348332_12542891	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300032783\|Ga0335079_10344106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1619	Open in IMG/M
3300032828\|Ga0335080_11385197	Not Available	700	Open in IMG/M
3300032892\|Ga0335081_10628182	Not Available	1319	Open in IMG/M
3300032892\|Ga0335081_11313418	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300032893\|Ga0335069_12649770	Not Available	516	Open in IMG/M
3300032955\|Ga0335076_10140329	All Organisms → cellular organisms → Bacteria → Proteobacteria	2335	Open in IMG/M
3300032955\|Ga0335076_10467316	Not Available	1145	Open in IMG/M
3300032955\|Ga0335076_11139429	Not Available	663	Open in IMG/M
3300033405\|Ga0326727_10195111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	2232	Open in IMG/M
3300033982\|Ga0371487_0211328	Not Available	920	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.24%
Host-Associated	Host-Associated	0.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.15%
Aquatic	Environmental → Aquatic	34.09%
Fungi	Host-Associated → Fungi	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.88%
Freshwater	Environmental → Aquatic → Freshwater	23.48%
Sediment	Environmental → Aquatic → Sediment	10.61%
Peat	Environmental → Terrestrial → Peat	1.52%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.76%
Mycelium	Host-Associated → Fungi → Mycelium	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	21.21%
Loam	Environmental → Terrestrial → Soil → Loam	11.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.61%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.85%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.27%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.52%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.76%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.79%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	18.18%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.61%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.85%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.03%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.52%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.52%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.42%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	14.39%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	10.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	9.85%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	7.58%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.82%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.06%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	3.79%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.03%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.03%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.27%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	2.27%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.27%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.52%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.76%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.76%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.76%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.76%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012177	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ027 MetaG	Host-Associated	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300027117	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300030843	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB2 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030973	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB6 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F62_06304270	2170459010	Grass Soil	MYGQVILHGRPDPVSKAAEVSFRPGRKSQLAERRVAIIRLLEKARHQQWVRAESVKACHRPTLLEDNPTSG
INPhiseqgaiiFebDRAFT_1047577752	3300000364	Soil	MYGQVIFHRRPDPSLNAAEVSIPLASGTRWRLAERRVAIVLLLVKVRHQQWVRAESSKAYRRPTLLEDNPTSG*
JGI12712J15308_101979532	3300001471	Forest Soil	MXGQVIFHRRPDPSLKAAEVSFRLASGTKWRLAERRLAMVRLLVKVRHQQWVRAESAKAYRPPTLLEDNPTSG*
JGIcombinedJ26739_1004424703	3300002245	Forest Soil	MXGQVIFHXRPDPSLKAAEVSFRLASGTKWRLAXRRVAMVRLLVKVRHQQWVRAESAKAYRPPTLLEDNPTSG*
JGI26341J46601_100201231	3300003219	Bog Forest Soil	MYGQVFFHRRPDPSLKAAKVSFRLASGGKWRLTERRVAMVRLLVEVRHQQWVSAESNKAYRPPSLLEDNPTSG*
JGI26341J46601_100705822	3300003219	Bog Forest Soil	MYGQVIFHRRRDPSLNAAEVSFRLASGGQWRLTETRVAMVGLLVRVRHQQWVYAESAKAYRPPTLLEDNPASG*
JGI26340J50214_101688842	3300003368	Bog Forest Soil	MYGQVIFHRRXDPSLNAAEVSFRLASGGQWRLTETRVAMVGLLVRVRHQQWVYAESAKAYRPPTLLEDNPTSG*
JGIcombinedJ51221_101650802	3300003505	Forest Soil	MYGQVIFHRRPDPSLKAAEVSFRLASGAKWRLAERRVALVRLLVKVRHQXWVRAESAKAYRPPTLLEDNPTSG*
Ga0062384_1009027321	3300004082	Bog Forest Soil	HGRDPSLKAAEVSIRLASGRKWRLVERRVAMARLLVKVRHQQWVRAESAKAYRPPTLLEDNPSSG*
Ga0062387_1004724231	3300004091	Bog Forest Soil	MHGQVILHDRFEPASKAAEVSFRLSRKWQLAERRAAVIRLLEKARHQQWVGAESVKAYRRPTLLED
Ga0062389_1007162031	3300004092	Bog Forest Soil	MHGQVILHGRFEPASKAAEVSFRLSRKWQLAERRAAVIRLLEKARHQQWVGAESVKAYRRPTLLEDNPTSG*
Ga0062386_1006706872	3300004152	Bog Forest Soil	MYGHVIFRRRPDPFSKAAEASFRLPSGRKWRLAERRVAVVGLLVKVRHQQWVRAESAKAYRPPTLLEDNPTSG*
Ga0062386_1008206252	3300004152	Bog Forest Soil	MYGQVILHRRPDPSSKAAEVSFRPGRKWQLAETRVVIVRLLVKARHQQWVRAESAKAYRRHTLLEDNPTSG*
Ga0062386_1011294251	3300004152	Bog Forest Soil	IMYGQVIFHRRPDPSLNAAEMSFPLASGARWRLAEGRVAIVRLVVKVRHQQWVRAESAKAYRPPTLLEDNPTSG*
Ga0062388_1002219592	3300004635	Bog Forest Soil	MHVQEIFHGRPHRSLSAAEVSFRIASGAKSRLAERRAAMVHLLVEVRHQQWVRAESAKPYRPHTLLEDNPTSG*
Ga0070709_103889902	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MHSQVILHGRFEPASKAAEVGSRPSRKWHLAERRAAVIRLLEKARHQQWVRAESVKAYRCPTLLEDNPTSG*
Ga0070761_104752141	3300005591	Soil	MYGQVIFHRRPDPSLKAAEVSFRLASGTKWRLAERRLAMVRLLVKVRHQQWVRAESAKAYRPPTLLEDNPTSG*
Ga0070762_107977152	3300005602	Soil	MYGQVIFHRRPDPSLKAAEVSFRLASGTKWRLAERRVAMVRLLVKVRHQQWVRAESAKAYRPPTLLEDNPTSG*
Ga0070763_105776792	3300005610	Soil	MYGQVIFHRRPDPSLKAAEVSFRLASGAKWRLAERRVALVRLLVKVRHQQWVRAESAKAYRPPTLLEDNPTSG*
Ga0075024_1008206072	3300006047	Watersheds	MYGQVIFHRRPDPSLKAAEVSFRLASGAKWRLAERRVAMVRLLVKVRHQQWVRAESAKAYRPPTL
Ga0075028_1004510171	3300006050	Watersheds	MYGQVIFHRRPDPSLKAAEVSFRLASGRQWRLAERRVAMVRLLVKVRHQQWVRAESAKAYRPPTLLEDNPTSG*
Ga0075029_1002086202	3300006052	Watersheds	MRVHGIFHRPHRSLSTVEVSFRLASGAKARLADRRAAMVHLLAEVRHQQWVRAESAKAYRPRTLLDDNPTSG*
Ga0075029_1002908482	3300006052	Watersheds	MYGQVIFHRRPDPSLKAAEVSFRLASGAKWRLAERRVAMVRLLVEVRHQQWVRAEAAKAYRPPTLLGDNPTSG*
Ga0075029_1004793731	3300006052	Watersheds	MYGRVIYHHGPDPSLKAAEVSFRLASGRKSRLAERRVGMVRLLVKIRHQQWVRAESAKAYRPPTLLEDNPSSG*
Ga0075029_1005268782	3300006052	Watersheds	MYGQVIFHRRPDPSLKAAEVSFRLASGMKWRLAERRLAMVRLLVKVRHQQWVRAESAKAYRPPTLLEDNPTSG*
Ga0075017_1014166942	3300006059	Watersheds	MYGQVIFHRRPDPSLKAAEVSFRLASGRKWRLAERRVAMVRLLAKVRYQQWVRAESAKAYRPPTLLEDNPTSG*
Ga0075017_1015542542	3300006059	Watersheds	MHVQEIFHRRPDWSLNAAEVSFRLGSGAKWRLAERRAAMLHLLVEVRHQQWVRAESAKAHRPRTLLEDNPTSG*
Ga0075015_1010095571	3300006102	Watersheds	MYGQVIFHRRPDPSLKAAEVSFRLASGAKWRLAERRVAMVRLLVEVRHQQWVRAEAAKAYRPPTLLEDNPTSG*
Ga0075018_100364581	3300006172	Watersheds	MYGQVIFHRRPDPSLKAAEVSFRLASGTKWRPAERRVAMVRLLVTVRHQQWVRAESAKAYRPARS*
Ga0075018_106521371	3300006172	Watersheds	MYGQVIFHRRPDPSLKAAEVSFRLASGAKWRLAERRVAMVRLLVKVRHQQWVRAESAKAYRPPTLLEDNPTSG*
Ga0075018_108027192	3300006172	Watersheds	MYGQVILHRRPDPVSKAAEVSFHLGRKWQLAERAIIQLVEKARHQQWVRAESVKAYRRPTLLEDNPTSG*
Ga0070712_1016361641	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MYGQVIFHRRPDPSLNAAEVSFPLASGTRWRLAERRVAIVHLLVKVRHQQWVRAESSKAYRRPTLLEDNPTSG*
Ga0070765_1022202851	3300006176	Soil	MYGQVIFHRRPDPSFKAEEMSFRLGSGRKWRLAERRVAMVRLLVKVRHQQWVRAESAKAYRPPTLLEDNPSSG*
Ga0075021_107027493	3300006354	Watersheds	MYGQVIFHRRPDPSLKAAEVSFRLASGAKWRLAERRVAMVRLLVTVRHQQWVRAESAKAYRPPTLLEDNPTSG*
Ga0116218_13858592	3300009522	Peatlands Soil	MYGQVIFHRRPDPSLKAAEVTFRLASCAKWRLAERRVAMVRLLVEVRHQQWVRAESAKAYRPPTLLEDNPTSG*
Ga0116221_14211152	3300009523	Peatlands Soil	MYGQVIFHRRPDPSLNAAEVSFRLASGGQWRLTETRVAMVGLLVRVRHQQWVYAESAKAYRPPTLLEDNPTSG*
Ga0116220_104272801	3300009525	Peatlands Soil	MYGQVIFHRRPDPSLKAAEVSFRLASGAKWRLAERRVAMVRLLVKVRHQQWVRAESAKAYRPPTLLEDSPTSG*
Ga0116224_103969672	3300009683	Peatlands Soil	MYGQVIFHRRPDPSLKAAEVSFRLASVAKWRLAERRVAMVRLLVEVRHQQWVRAESAKAYRPPTLLEDNPTSG*
Ga0116216_102507152	3300009698	Peatlands Soil	MYGQVFFHRRPDPSLKAAKVSFRLASGGKWRLTERRVAMVRLLVEVRHQQWVRAESTKAYRPPTLLEDNPTSG*
Ga0116223_106765142	3300009839	Peatlands Soil	MYGQVFFHRRPDPSLKAAKVSFRLASGGKWRLTERRVAMVRLLIDVRHQQWVRAESAKAYRPPTLLEDNPTSG*
Ga0127503_101354251	3300010154	Soil	MYGQEIFHRRPDPSLNAAEVGVHLAAGAKSRLAERRAAIVHLLVEVRHQQWVSAESAKAYRPRTLLDDNPTSG*
Ga0127503_108502301	3300010154	Soil	MYGQVILHGRLDPASKAAEVSFRLARKWQLAERRVAIIRLLEKARHQQWVRAESVKAYRRPTLLEDNPTSG*
Ga0127503_109390202	3300010154	Soil	MYGQVIFHRRPDPSLKAAEVSFRLASGTKWRLAERRVAMVRLLVEVRHQQWVRAESAKAYRPPTLLEDNPTSG*
Ga0074046_103322491	3300010339	Bog Forest Soil	RRRIMYGQVIFHRRPDPSLNAAEVSFRLASGGQWRLTETRVAMVGLLVRVRHQQWVYAESAKAYRPPTLLEDNPASG*
Ga0074045_104214232	3300010341	Bog Forest Soil	MYGQVIFHRRPDPSLNAAEVRFPVASGARWRLAERRVAIVRLLVKVRHQQWVRAESAKAYRPPTLLEDNPTSG*
Ga0074045_107292511	3300010341	Bog Forest Soil	MYGQVIFHCRPDPSLKAAEVSFRLASGTKWRLAERRVAMVHLLVKVRHQQWVRAESAKAYRPPTLLEDNPTSG*
Ga0074044_100335782	3300010343	Bog Forest Soil	MYGQVIFHCRPDPSLKAAEVSFRLASGTKWRLAERRVAMVRLLVKVRHQQWVRAEWAKAYRPPTLLEDNPTSG*
Ga0074044_100911682	3300010343	Bog Forest Soil	MYAHVIFRRRPDPFSKAAEASFRLPSGRKWRLAERRVAVVGLLVKVRHQQWVRAESAKAYRPPTLLEDNPTSG*
Ga0136449_1010828043	3300010379	Peatlands Soil	MYGQVIFHRRPDPSLNAAEVSFPQVSRARWRLTERRVTIVHLLVEVRHQQWVLAESAKAYRPPTLLEDNPTSG*
Ga0150983_104978562	3300011120	Forest Soil	MYGQVILHGRLDQASKAAEVSFRLARKWQLAERVAIIRSLEKARHQQWVRAESVKAYRRPTLLEDNPTSG*
Ga0153943_10362911	3300012177	Attine Ant Fungus Gardens	MYGQVIFHRRPDPSLKAAEVSFRLASGTKWRLAERRVAMVRLLDKVRHQQWVRAESTNAYRPHTLPEDNPTSG*
Ga0137363_102339992	3300012202	Vadose Zone Soil	MYGQVIFHHRPDPSLKAAEVSFRLASGTKWRLAEKRVAMVRLLVKVRHQQWVRAESAKAYRPPTLLEDNPTSG*
Ga0137413_101763892	3300012924	Vadose Zone Soil	MYGQVIFHHRPDPSLKAAEVSFRLASGTKWRLAERRVAMVRLLVKVRHQQWVRAESAKAYRPPTLLEDNPTSG*
Ga0137413_104449222	3300012924	Vadose Zone Soil	MYGQVILHRRPDPVSKAAEVSFRLGRKWQLAERPVAIIRLLEKARHQQWVRAESVQAYHRPTLLEDNPTSG*
Ga0164305_111616041	3300012989	Soil	MYGQVIFHRRPDPSLKAAEVSFRLASGTKWRLAERRVAMVRLLVKVQHQQWVRAESAKAYRPPTLLEDNPTSG*
Ga0181531_103498322	3300014169	Bog	MYGQVIVHGRLEPASKAEEVTFRPSRTWQLVERRAAVIRLLEKARHQQWVRVESVKASHRSTLLKDNPTSG*
Ga0181535_104370221	3300014199	Bog	MYGQEIFHRRPDPSLNAAEVSFRLASGTKWRLADRRVAMVGLLVKVRHQQWVRAESAKAYRPRTLLEDNPTSG*
Ga0181526_105541901	3300014200	Bog	MYGQEIFHRRPDPSFNAAEEVSFRLASGTKWRLADRRVAMIGLLVKVRHQQWVRAESAKAYRPHTLLEDNPTSG*
Ga0182040_114314732	3300016387	Soil	MYGQVIFHRRPDPSLEVAEVSFPLASGTKWRLAERRLAIVRLLVKIRHQQWVRAESAKAYRPPTLLEDNPASG
Ga0187802_103847411	3300017822	Freshwater Sediment	MYGLVIFHRRPDPSLKAAEVSFRLASGRKWRLAERRVAMVRLLVEVRHQQWVRAESAKAYRPPTLLEDNPTSG
Ga0187819_104611872	3300017943	Freshwater Sediment	MYGQVIFHRRPDPSLNAAEVSFPLASGTRWRLAEKRVAIVHLLVKVRHQQWVRAESSKAYRPPTLLEDNPTSG
Ga0187879_105226781	3300017946	Peatland	MYGQEIFHHRPDPSFNAAEEVSFRLASGTKWRLADRRVAMIGLLVKVRHQQWVRAESAKAYRPHTLLEDNPTSG
Ga0187817_100379473	3300017955	Freshwater Sediment	MYGQVIFHRRPDPSLKAAEVSFRLASGGKWRLAERRVAMVRLLVEVRHQQWVRAESAKAYRPPTLLEDNPTSG
Ga0187816_104516792	3300017995	Freshwater Sediment	MYGQVILHRRPDPSSKAAEVSFRPGRKWRLAERRVVIVRLLVKARHQQWVRAESAKAYRPPTLLEDNPSSG
Ga0187855_109386271	3300018038	Peatland	MYGQEIFHRRPDPSLNAAEVSFRLASGTKWRLADRRVAMIGLLVKVRHQQWVRAESAKAYRPHTLLEDNPTSG
Ga0210407_103736741	3300020579	Soil	MYGQVIFHHRPDPSLKAAEVSFRLASGTKWRLAERRVAMVRLLVKVRHQQWVRAESAKAYRPPTLLEDNPTSG
Ga0210407_105336972	3300020579	Soil	MYGQVILHGRLDPASKAAEVSFRLARKWQLAERRVAIIRLLEKARHQQWVRAESVKAYRRPTLLEDNPTSG
Ga0210407_111753191	3300020579	Soil	MHSQVILHGRFEPASKAAEVGSRPSRKWHLAEGRAAVIRLLEKARHQQWVRAESVKAYRRPTLLEDNPTSG
Ga0210403_110047861	3300020580	Soil	MYGQVIFHRRPDPSLKAAEVSFRLASGTKWRLAERRVAMVRLLVKVRHQQWVRAESAKAYRPPTLLEDNPTSG
Ga0210399_105992432	3300020581	Soil	MYGQVILHCRPDPVSKAAEVSFRLGRKWQLAERRVAIIRLLEKARHQHWVRAESVKAYRRPTLLEDNPTSG
Ga0210399_111435681	3300020581	Soil	MYGQVIFHRRPDPSLKAAEVSFRLASGTKWRLAERRVAMVRLLVKVRHQHWVRAESAKAYRPPTLLEDNPIS
Ga0210395_114318421	3300020582	Soil	MYGQVILHGRLDPASKAAEVSFRLARKWQLAERRVAIIRLLEKARHQQWVRAESVKACHRPTLLEDNPTSG
Ga0210401_115262921	3300020583	Soil	GSESTTRMLPRRRIMYGQVIFHRRPDPSLKAAEVSFRLASGAKWRLAERRVALVRLLVKVRHQQWVRAESAKAYRPPTLLEDNPTSG
Ga0210406_102088633	3300021168	Soil	MHSQVILHGRFEPASKAAEVGSRPSRKWHLAERRAAVIRLLEKARHQQWVRAESVKAYRRPTLLEDNPTSG
Ga0210406_105654731	3300021168	Soil	MYGQVIFHRRSDPSLKAAEVGFRLASGAKWRLAERRVAMVRLLVKARHQQWVRAESAKAYRPHTLLEDNPTSG
Ga0210405_110999022	3300021171	Soil	MYGQVILHRRPDPVSKAAEVGFRLGRKWELAERRVAIIRLLEKARHQQWVRAESVKAYRRPTLLEDNPTSG
Ga0210388_109527311	3300021181	Soil	MYGQVIFHRRPDPSLKAAEVSFRLASGTKWRLAERRLAMVRLLVKVRHQQWVRAESAKAYRPPTLLEDNPTSG
Ga0210393_103525192	3300021401	Soil	MHSQVILHGRFEPASKAAEVGSRPSRKWHLAERRAAVIRLLEKARHQQWVRAESVKACHRPTLLEDNPTSG
Ga0210389_109684991	3300021404	Soil	MYGQVIFHRRPDPSLKAAEVSFRLASGAKWRLAERRVALVRLLVKVRHQQWVRAESAKAYRPPTLLEDNPTSG
Ga0210383_112695841	3300021407	Soil	MYGQVILHRRPDPVSKAAEVSFRLGRKWQLAERRVAIIRLLEKARHQQWVRAESVKACHRPTLLEDNPTSG
Ga0210384_109541801	3300021432	Soil	LGAKRWIVIREPFGCPEVRSGSATGMLPRRPIMYGQVILHGRLDPASKAAEVSFRLARKWQLAERRVAIIRLLEKARHQQWVRAESVKAYRRPTLLEDNPTSG
Ga0210392_108941181	3300021475	Soil	PASKAAEVSFRLARKWQLAERRVAIIRLLEKARHQQWVRAESVKAYRRPTLLEDNPTSG
Ga0210398_105565132	3300021477	Soil	MYGQVIFHRRPDPSLKAAEVSFRLASGMKWRLAERRLAMVRLLVKVRHQQWVRAESAKAYRPPTLLEDNPTSG
Ga0210402_103701202	3300021478	Soil	MYGQVIFHHRPDPSLKAAEVSFRLASGTKWRLAERRVAMVRLLVKVRHQHWVRAESAKAYRPPTLLEDNPTSGDRQRRGE
Ga0242664_11524281	3300022527	Soil	MYGQVIFHRRPDLSLKAAEVSFRLASGTKWRLAERRVAMVRLLVKVRHQQWARAESAKAYRPPTLLEDNPTSG
Ga0209732_11007742	3300027117	Forest Soil	MYGQVIFHRRPDPSLKAAEVSFRLASGTKWRLAERRLAMVRLLVKVRHQQWVRAESAKAYRPPTLLEDNPTS
Ga0209530_10219463	3300027692	Forest Soil	MYGQVIFHRRLDPSLKAAEVSFRLASGTKWRLAERRVAMVRLLVKVRHQQWVRAESAKAYRPPTLLEDSPTPGDRQRRGE
Ga0209328_102286231	3300027727	Forest Soil	MYGQVIFRRRPDPSLKAAELSFRLASGTKWRLAERRVAMVRLLVKVRHQQWVRAESAKAY
Ga0209448_100179375	3300027783	Bog Forest Soil	MYGQVIFHRRPDPSLKAAEVSFRLASGTKWRLAERRVAMVRLLVKVRHQQWVRAEWAKAYRPPTLLEDNPTSG
Ga0209656_100215033	3300027812	Bog Forest Soil	MYGQVFFHRRPDPSLKAAKVSFRLASGGKWRLTERRVAMVRLLVEVRHQQWVSAESNKAYRPPSLLEDNPTSG
Ga0209656_102262712	3300027812	Bog Forest Soil	MYGQVIFHRRPDPSLNAAEVSFRLASGGQWRLTETRVAMVGLLVRVRHQQWVYAESAKAYRPPTLLEDNPASG
Ga0209656_103666801	3300027812	Bog Forest Soil	MYGQVIFHCRPDPSLKAAEVSFRLASGTKWRLAERRVAMVRLLVKVRHQQWVRAEWAKAYRPPTLLEDNPTSG
Ga0209040_100526433	3300027824	Bog Forest Soil	MYGQVIFHRRPDPSLKAAEVSFRLTSGSQWRLAERRVASVRLLVKLRHQQGVRAESAKAYRPPTLLEDNPTSG
Ga0209040_101468482	3300027824	Bog Forest Soil	MYGHVIFRRRPDPFSKAAEASFRLPSGRKWRLAERRVAVVGLLVKVRHQQWVRAESAKAYRPPTLLEDNPTSG
Ga0209040_102831801	3300027824	Bog Forest Soil	MYGQVILHRRPDPSSKAAEVSSRPGRKWRLAERRVVIVRLLVKARHQQWVRAESAKAYRRHTLLEDNPTSG
Ga0209040_104102262	3300027824	Bog Forest Soil	MYGQVIFHRRRDPSLNAAEVSFRLASGGQWRLTETRVAMVGLLVRVRHQQWVYAESAKAYRPPTLLEDNPASG
Ga0209039_100295683	3300027825	Bog Forest Soil	MYGQVIFHRRPDPSLNAAEVRFPVASGARWRLAERRVAIVRLLVKVRHEQWVLAESAKAYRPPTLLEDNPTSG
Ga0209006_102027652	3300027908	Forest Soil	MYGQVIFHRRPDPSLKAAEVSFRLASGTKWRLAERRLAMVRLLVKVRHQQWVRAESAKAYSPPTLLQDNPTSG
Ga0209006_108579602	3300027908	Forest Soil	MYGQVIFHHRPDPSLKAAEVSFRLASGTKWRLADRRVAMVRLLVKVRHQQWVRAESAKAYRPPTLLEDNPTSG
Ga0209698_107809671	3300027911	Watersheds	MYGQVIFHRRPDPSLKAAEVSFRLASGRQWRLVETRVASVSLLVKLRHQQWVRAESAKAYRPPTLLEDNPTSG
Ga0310037_100225136	3300030494	Peatlands Soil	MYGQVIFHRRPDPSLNAAEVSFRLASGGQWRLTETRVAMVGLLVRVRHQQWVYAESAKAYRPPTLLEDNPTSG
Ga0265459_136256792	3300030741	Soil	RRAERDKSESKGSGSTTKMLPRRRIMYGQVIFHRRPDPSLKAAEVGFRLASGAKWRLAERRVAMVRLLVKVRHQQWVRAESARAYRPHTLLEDNPTSG
Ga0075392_108623672	3300030843	Soil	MCGQVIFHRRPNPSLKAAEVSFRLASGAKWRLAERRVALVRSLVKVRHQQWVRAESAKAYRPPTLLEDNPTSG
Ga0075395_111028132	3300030973	Soil	MYGQVIFHPRPDPSLNAAEVSFPLASGARWRLAERRVAMVRLLVKVRHQQWVRAESAKAYRPPTLLEDNPTSG
Ga0170834_1002173911	3300031057	Forest Soil	MYGQVILHRRPDPVSKAVEVSFRLGRKWQLAERRVVIVRLLEKARHQQWVRAESVKAYRRPTLIEDNPTSG
Ga0170834_1063234601	3300031057	Forest Soil	ARRRTVGRGERIGNGMLPRRPLMYGQVILHGRPDPVSKAAEVSFRPGRKSQLAERRVAIIRLLEKARHQQWVRAESVKAYRRPTLLEDNPTSG
Ga0170834_1080377771	3300031057	Forest Soil	MYGQVIFHRRPDPSLKAAEVGFRLASGAKRRLAERRVAMVRLLVKVRHQQWVRAESAKAYRPHTLLEDNPTSG
Ga0170834_1107069022	3300031057	Forest Soil	MYGQVIFHHRPDPSLKAAEVSFRLASGTKWRLAERRLAMVRLLVKVRHQQWVRAESAKAYRPPTLLEDNPTSG
Ga0170823_129222671	3300031128	Forest Soil	MYGQVILHRRPDPVSKAAELSFRLGRKWHLAERRVAIIRLLEKARHQQWVRAESVKAYRRPTLLEDNPTSG
Ga0170823_154541832	3300031128	Forest Soil	MYGQVILHTRLDPASKAAELSFRLARKWQLAERRVAIIRSLEKARHQQWVRAESVKACHRPTLLEDNPTSG
Ga0170823_169467591	3300031128	Forest Soil	MYGQVIFHRRPDPSLKAAEVSFRLASGTKWRLAERRVAMVRLLVKVRHQQWMRAESAKAYRPPTLLEDNPTSG
Ga0170824_1052382273	3300031231	Forest Soil	MYGQVIFHPRPDPSLNAAEVSFPLASGARWRLAERRVAIVRLLVKVRHEQWVLAESAKAYRPPTLLEDNPTSG
Ga0170824_1078986281	3300031231	Forest Soil	MYGQVILHGRHDLVSKAAEASFRLGRKWQLAERRVAIIRLLKKARHQQWVRAESVKAYH
Ga0170824_1123293591	3300031231	Forest Soil	MHSQVILHGRFEPASKAAEVGSRPSRKWHLAERRAAVIRLLEKARHQQWVRAESVKAYR
Ga0170824_1217207903	3300031231	Forest Soil	MHVQEIFHRRPDWSLNAAEVSFRLGSGAKWRLAERRAAMLHLLVEVRHQQWVRAESAKAHRPRTLLEDNPTSG
Ga0170820_145091121	3300031446	Forest Soil	MYGQVILHGRLDPASKAAEVSFRLGRKWQLAERRVVIVRLLEKARHQQWVRAESVKAYRRPTLIEDNPTSG
Ga0170820_164528381	3300031446	Forest Soil	MYGQVILHRRPDPVSKAAEVSFHLGRKWQLAERRVAIIRLLEKARHQQWVRAESVKAYRRPTLLEDNPTSG
Ga0310686_1064980002	3300031708	Soil	MRRVMYGQVILHGRPDLVSKVVEASFSLGRKWQLAERRVAIIRSLEKARHQQWVRAESVKAYRRPTLLEDNPTSG
Ga0311301_107215452	3300032160	Peatlands Soil	MYGQVIFHRRPDPSLKAAEVTFRLASGAKWRLAERRVAMVRLLVEVRHQQWVRAESAKAYRPPTLLEDNPTSG
Ga0311301_129986621	3300032160	Peatlands Soil	MYGRVIYHHGPDPSLKAAEVSFRLASGRKSRLAERRVGMVRLLVKIRHQQWVRAESAKAYRPPTLLEDNPSSG
Ga0307471_1034104412	3300032180	Hardwood Forest Soil	MYGQVILHRRPDPVSKAAEVSFRLGRKWQLAERRVAIIRLLEKARHQQWVRAESVKAYRGPTLLEDNPTSG
Ga0348332_125428912	3300032515	Plant Litter	MYGQVILHRRPDPVSKAAEVSFRLGRKWQLAERRVAIIRLLEKARHQQWVRAESVKAYRRPTLLEDNPTSG
Ga0335079_103441062	3300032783	Soil	MYAQVIFHRHRGPSSKAAAASFRLASNTRRRLAERRVAIVGLLVKVRHQQWVRAESAKSYRPPTLLEDNPTSG
Ga0335080_113851971	3300032828	Soil	MHVQEIFHRRPGPFLNAAEVSFRLASGAKWRLAESRVAMVGLLVEVRHQQWVRAESAKAYRPPTLLEDNPTSG
Ga0335081_106281821	3300032892	Soil	MYGQVIFHRRPDPSLKAAEVSFRLASGTKWRLAERRGAMVRLLVKVRHQQWVRAESEKAYRPPTLLEDNPSSG
Ga0335081_113134181	3300032892	Soil	MEAHHVRPMYAQVIFHRRPGPPSKAAAASFRLASNTRWRLAERRVAIVGLLVKVRHQQWVRAESAKSYRPPTLLEDNPTSG
Ga0335069_126497701	3300032893	Soil	RRIMFGQDIFHPRPDPSLNAAQVSLRLASGAKWRLAERRAAMVRLLVEVRHQQWVRAESVKAYRPPTLLEDNPTSG
Ga0335076_101403292	3300032955	Soil	MYGQEIFHRRSDSSLNAAEVSFRLASDTKWRLAERRVAMVRLLVKVRHEQWVRAESAKAYRPHTLLEDNPTSG
Ga0335076_104673162	3300032955	Soil	VYGQDIFHRRPGPSLNAAEVSFRLASGAKWRLAERRAAMVRLLVEVRHQQWVRAESVKAYRPPTLLEDNPTSG
Ga0335076_111394292	3300032955	Soil	MHVQEIFHRRPGPFLNAAEVSFRLASGAKWRLAESRVAMVGLLVEVRHQQWVRAESAKAYRRPTLLEDNPTSG
Ga0326727_101951112	3300033405	Peat Soil	MYAQVIFHRRPGPSSKAAGASFRLASNTRWRLAERRVAIVGLLVKVRHQQWVRAESAKSYRPPTLLEDNPTSG
Ga0371487_0211328_300_521	3300033982	Peat Soil	MYGQVIFHRRPDPSLKAAEVSFRLASGTKWQLAERRGAMVRLLVKVRHQQWVRAESEKAYRPPTLLEDNPSSG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061247

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences