Metagenome Family F061297

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F061297
Family Type	Metagenome
Number of Sequences	132
Average Sequence Length	92 residues
Representative Sequence	MSCLLCGSGNEAELTGEIVIHFSGLKNLDKPGVWVFPKLFVCLDCGYSHFTVPQRELDSIAHTLEISSPTSESSAGDVELSSGLASQVGSRNW
Number of Associated Samples	94
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.33 %
% of genes near scaffold ends (potentially truncated)	22.73 %
% of genes from short scaffolds (< 2000 bps)	81.06 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (92.424 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil (12.121 % of family members)
Environment Ontology (ENVO)	Unclassified (40.909 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (64.394 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.74% β-sheet: 15.70% Coil/Unstructured: 73.55%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF00072	Response_reg	44.70
PF12704	MacB_PCD	1.52
PF13505	OMP_b-brl	1.52
PF00440	TetR_N	0.76
PF00137	ATP-synt_C	0.76
PF14659	Phage_int_SAM_3	0.76
PF13620	CarboxypepD_reg	0.76
PF05050	Methyltransf_21	0.76
PF02371	Transposase_20	0.76
PF07238	PilZ	0.76
PF00230	MIP	0.76
PF08388	GIIM	0.76
PF12728	HTH_17	0.76
PF10099	RskA	0.76
PF06745	ATPase	0.76
PF00691	OmpA	0.76
PF13751	DDE_Tnp_1_6	0.76
PF01548	DEDD_Tnp_IS110	0.76
PF04545	Sigma70_r4	0.76
PF08447	PAS_3	0.76
PF01527	HTH_Tnp_1	0.76
PF06283	ThuA	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.52
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	0.76
COG0636	FoF1-type ATP synthase, membrane subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K	Energy production and conversion [C]	0.76
COG4813	Trehalose utilization protein	Carbohydrate transport and metabolism [G]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.94 %
Unclassified	root	N/A	6.06 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.42 %
Unclassified	root	N/A	6.06 %
Viruses	superkingdom	All Organisms → Viruses	1.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.42 %
Unclassified	root	N/A	6.06 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.52 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	60.61 %
Unclassified	root	N/A	6.06 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.52 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.76 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	46.21 %
Unclassified	root	N/A	6.06 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.52 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.21 %
Unclassified	root	N/A	6.06 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.52 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.21 %
Unclassified	root	N/A	6.06 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.52 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.21 %
Unclassified	root	N/A	6.06 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.52 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.76 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.21 %
Unclassified	root	N/A	6.06 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.52 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.76 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.76 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16551116	All Organisms → cellular organisms → Bacteria	3156	Open in IMG/M
2088090014\|GPIPI_17319221	All Organisms → cellular organisms → Bacteria → Acidobacteria	1277	Open in IMG/M
2088090014\|GPIPI_17404642	All Organisms → cellular organisms → Bacteria	4019	Open in IMG/M
2170459005\|F1BAP7Q02INAHA	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300004114\|Ga0062593_100142462	All Organisms → cellular organisms → Bacteria	1799	Open in IMG/M
3300005169\|Ga0066810_10148126	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300005330\|Ga0070690_100767171	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300005340\|Ga0070689_101030725	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300005340\|Ga0070689_101628151	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300005356\|Ga0070674_100595239	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300005365\|Ga0070688_100741386	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300005367\|Ga0070667_101323327	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300005367\|Ga0070667_101941332	Not Available	554	Open in IMG/M
3300005435\|Ga0070714_100893721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	862	Open in IMG/M
3300005439\|Ga0070711_100004329	All Organisms → cellular organisms → Bacteria	8359	Open in IMG/M
3300005439\|Ga0070711_100401095	Not Available	1113	Open in IMG/M
3300005439\|Ga0070711_100879280	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	764	Open in IMG/M
3300005445\|Ga0070708_101041627	Not Available	767	Open in IMG/M
3300005459\|Ga0068867_100295845	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1333	Open in IMG/M
3300005467\|Ga0070706_100181376	All Organisms → cellular organisms → Bacteria → Acidobacteria	1966	Open in IMG/M
3300005526\|Ga0073909_10013821	All Organisms → cellular organisms → Bacteria	2510	Open in IMG/M
3300005539\|Ga0068853_100558317	All Organisms → Viruses → Predicted Viral	1085	Open in IMG/M
3300005539\|Ga0068853_100800428	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	903	Open in IMG/M
3300005539\|Ga0068853_101820958	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300005544\|Ga0070686_100799512	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300005548\|Ga0070665_100001001	All Organisms → cellular organisms → Bacteria	35846	Open in IMG/M
3300005548\|Ga0070665_101305513	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300005549\|Ga0070704_100463746	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300005718\|Ga0068866_10179373	All Organisms → cellular organisms → Bacteria	1250	Open in IMG/M
3300005841\|Ga0068863_100003166	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	16266	Open in IMG/M
3300005843\|Ga0068860_100087231	All Organisms → cellular organisms → Bacteria	2971	Open in IMG/M
3300005843\|Ga0068860_100638481	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1072	Open in IMG/M
3300006163\|Ga0070715_10996770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300006173\|Ga0070716_100163614	All Organisms → cellular organisms → Bacteria → Acidobacteria	1444	Open in IMG/M
3300006175\|Ga0070712_100252235	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1410	Open in IMG/M
3300006175\|Ga0070712_100822144	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	798	Open in IMG/M
3300006175\|Ga0070712_101148984	Not Available	675	Open in IMG/M
3300006237\|Ga0097621_100085412	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2632	Open in IMG/M
3300006237\|Ga0097621_101421216	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300006358\|Ga0068871_100388275	All Organisms → cellular organisms → Bacteria → Acidobacteria	1241	Open in IMG/M
3300006852\|Ga0075433_10213967	All Organisms → cellular organisms → Bacteria → Acidobacteria	1713	Open in IMG/M
3300006871\|Ga0075434_100222420	All Organisms → cellular organisms → Bacteria	1908	Open in IMG/M
3300006871\|Ga0075434_100527965	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
3300006881\|Ga0068865_100248183	All Organisms → cellular organisms → Bacteria	1404	Open in IMG/M
3300006881\|Ga0068865_100423531	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1095	Open in IMG/M
3300006904\|Ga0075424_100217599	All Organisms → cellular organisms → Bacteria → Acidobacteria	2030	Open in IMG/M
3300007255\|Ga0099791_10658880	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300009098\|Ga0105245_13182183	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300009101\|Ga0105247_10155950	All Organisms → cellular organisms → Bacteria → Acidobacteria	1508	Open in IMG/M
3300009148\|Ga0105243_10499847	All Organisms → cellular organisms → Bacteria → Acidobacteria	1152	Open in IMG/M
3300009174\|Ga0105241_11403468	Not Available	669	Open in IMG/M
3300009174\|Ga0105241_11788452	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300009176\|Ga0105242_10045310	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3564	Open in IMG/M
3300009553\|Ga0105249_11646576	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714	Open in IMG/M
3300010046\|Ga0126384_10267836	All Organisms → cellular organisms → Bacteria	1389	Open in IMG/M
3300011269\|Ga0137392_11040375	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300012200\|Ga0137382_10792741	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300012493\|Ga0157355_1039974	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300012500\|Ga0157314_1017955	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	694	Open in IMG/M
3300012923\|Ga0137359_10552644	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300012924\|Ga0137413_11606040	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300012929\|Ga0137404_10231738	All Organisms → cellular organisms → Bacteria	1578	Open in IMG/M
3300012955\|Ga0164298_10784457	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300012989\|Ga0164305_10383806	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1070	Open in IMG/M
3300013297\|Ga0157378_10397102	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1358	Open in IMG/M
3300013308\|Ga0157375_10557684	All Organisms → Viruses → Predicted Viral	1307	Open in IMG/M
3300015371\|Ga0132258_10115088	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6378	Open in IMG/M
3300015371\|Ga0132258_11546680	All Organisms → cellular organisms → Bacteria	1675	Open in IMG/M
3300015372\|Ga0132256_102816458	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300015372\|Ga0132256_103219312	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300015373\|Ga0132257_100074428	All Organisms → cellular organisms → Bacteria	3851	Open in IMG/M
3300015374\|Ga0132255_100389441	All Organisms → cellular organisms → Bacteria	2027	Open in IMG/M
3300015374\|Ga0132255_102368442	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	810	Open in IMG/M
3300015374\|Ga0132255_103639638	Not Available	655	Open in IMG/M
3300020199\|Ga0179592_10243904	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	808	Open in IMG/M
3300020199\|Ga0179592_10377150	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300020579\|Ga0210407_10083021	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2417	Open in IMG/M
3300020580\|Ga0210403_10044832	All Organisms → cellular organisms → Bacteria	3535	Open in IMG/M
3300021168\|Ga0210406_10005164	All Organisms → cellular organisms → Bacteria → Acidobacteria	13755	Open in IMG/M
3300021475\|Ga0210392_10659989	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	777	Open in IMG/M
3300021478\|Ga0210402_10219160	All Organisms → cellular organisms → Bacteria	1752	Open in IMG/M
3300024232\|Ga0247664_1018527	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1618	Open in IMG/M
3300024288\|Ga0179589_10006069	All Organisms → cellular organisms → Bacteria	3298	Open in IMG/M
3300024331\|Ga0247668_1069479	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300024347\|Ga0179591_1120996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	4061	Open in IMG/M
3300025898\|Ga0207692_10393884	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300025900\|Ga0207710_10183197	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1028	Open in IMG/M
3300025910\|Ga0207684_10325568	All Organisms → cellular organisms → Bacteria	1324	Open in IMG/M
3300025911\|Ga0207654_10907409	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300025914\|Ga0207671_10531504	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	937	Open in IMG/M
3300025915\|Ga0207693_10281019	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1304	Open in IMG/M
3300025915\|Ga0207693_10974073	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300025935\|Ga0207709_10177890	All Organisms → cellular organisms → Bacteria	1499	Open in IMG/M
3300025937\|Ga0207669_11140944	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300025942\|Ga0207689_10316190	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1295	Open in IMG/M
3300025961\|Ga0207712_10168073	All Organisms → cellular organisms → Bacteria	1711	Open in IMG/M
3300026088\|Ga0207641_10007398	All Organisms → cellular organisms → Bacteria → Acidobacteria	9135	Open in IMG/M
3300026555\|Ga0179593_1201737	All Organisms → cellular organisms → Bacteria	3260	Open in IMG/M
3300026557\|Ga0179587_10706383	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300027061\|Ga0209729_1053266	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300027071\|Ga0209214_1011267	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300027821\|Ga0209811_10007672	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3454	Open in IMG/M
3300027821\|Ga0209811_10314993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300028138\|Ga0247684_1067074	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300028379\|Ga0268266_10001385	All Organisms → cellular organisms → Bacteria	29151	Open in IMG/M
3300028381\|Ga0268264_10099871	All Organisms → cellular organisms → Bacteria → Acidobacteria	2519	Open in IMG/M
3300028381\|Ga0268264_12401913	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300031057\|Ga0170834_103826721	All Organisms → cellular organisms → Bacteria → Acidobacteria	870	Open in IMG/M
3300031057\|Ga0170834_107158259	Not Available	837	Open in IMG/M
3300031057\|Ga0170834_108572150	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300031122\|Ga0170822_13078494	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300031128\|Ga0170823_13190286	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300031128\|Ga0170823_17260580	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300031231\|Ga0170824_101515084	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	835	Open in IMG/M
3300031231\|Ga0170824_107024265	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	781	Open in IMG/M
3300031231\|Ga0170824_108565331	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300031231\|Ga0170824_113774975	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300031231\|Ga0170824_114831940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300031231\|Ga0170824_116447543	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1613	Open in IMG/M
3300031446\|Ga0170820_13716807	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300031446\|Ga0170820_14676548	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	715	Open in IMG/M
3300031474\|Ga0170818_101730769	Not Available	713	Open in IMG/M
3300031474\|Ga0170818_112568334	All Organisms → cellular organisms → Bacteria	1652	Open in IMG/M
3300031720\|Ga0307469_10315055	All Organisms → cellular organisms → Bacteria	1296	Open in IMG/M
3300031720\|Ga0307469_10991164	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	784	Open in IMG/M
3300031820\|Ga0307473_11517647	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300032174\|Ga0307470_10026277	All Organisms → cellular organisms → Bacteria → Acidobacteria	2707	Open in IMG/M
3300032174\|Ga0307470_11228730	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300032174\|Ga0307470_11796816	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300032180\|Ga0307471_100169311	All Organisms → cellular organisms → Bacteria	2135	Open in IMG/M
3300032180\|Ga0307471_102008833	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300032205\|Ga0307472_100879407	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	61.36%
Host-Associated	Host-Associated	38.64%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.36%
Plants	Host-Associated → Plants	38.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.91%
Roots	Host-Associated → Plants → Roots	2.27%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.94%
Loam	Environmental → Terrestrial → Soil → Loam	17.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.64%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.36%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.55%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.27%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.91%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.55%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.03%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.52%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	12.12%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.36%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.09%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.06%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.55%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.03%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.03%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.03%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.03%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.27%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	2.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.52%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.76%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.76%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012493	Unplanted soil (control) microbial communities from North Carolina - M.Soil.10.yng.090610	Environmental	Open in IMG/M
3300012500	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610	Host-Associated	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027061	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028138	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK25	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03205790	2088090014	Soil	MSCLLCGSGNQAELTAEMVIHFSGLKNLDKPGVWVFPKLLVCLDCGCSHFTVPERELASIARTLEISSPTLESSPGDVALSSGLASQVGSRNWQFMGY
GPIPI_01651000	2088090014	Soil	MFCLLCGSGNQAELAAEMLIHFSGLKNLDKPGVWVFPKLLVCLDCGYSHFTAPETELASIAHTLEISSPTLESSAGDVALSKGY
GPIPI_02458160	2088090014	Soil	MSCLLCGSGNEAELTGELVIHFSGLKNLDKPGVWIFPKLFVCLDCGYSHFTVPKRELDSIAHTLEISSPTSESSAADVELSSGLASQVGSRNWQFMGY
E41_11499580	2170459005	Grass Soil	MSCQLCGSGNEAELDAEMIIHFSGLKNLDQPGVWVFSKVLVCLDCGCSHFTVPKTKLESIAYTLENKSSTLESSAWRSHAQ
Ga0062593_1001424623	3300004114	Soil	MSCLLCGSGNQAELTAEMLIHFSGLKNLDKPGVWAFPKLLVCLDCGCSHFAVPDRELASISRTLEISSPTLESSAGGCSTQ*
Ga0066810_101481261	3300005169	Soil	MSCQLCGSGNETELAAEMIIHFSGLRNLDKPGVWVFAKLMVCLDCGCSQFTVPERELASIARTPENKSSPLESSAWRSHAQ*
Ga0070690_1007671712	3300005330	Switchgrass Rhizosphere	MSCLLCGSDNEAELTGEIVIHFSGLKNLDKPGVWVFPKLFVCLDCGYSHFTVPQRELDSIAHTLEISSPTSESSAGDVELSSGLASQVGSRNWRFIGY*
Ga0070689_1010307251	3300005340	Switchgrass Rhizosphere	SNQAERSAEMVIHLSGRENLDTPGAWVFPKLLVCLDCGFSHFTLQKTELAGVAKDTREDKFSALEASAGDVPLSGGSASQVGS*
Ga0070689_1016281512	3300005340	Switchgrass Rhizosphere	MSCLLCGSGNEAELTGEIVIHFSGLKNLDKPGVWVFPKLFVCLDCGYSHFTVPQRELDSIAHTLEISSPTSESSAGDVELSSGLASQVGSRNWRFIGY*
Ga0070674_1005952392	3300005356	Miscanthus Rhizosphere	MSCLLCGSGNEAELTGEIVIHFSGLKNLDKPGVWVFPKLFVCLDCGYSHFTVPQRELDSIAHTLEISSPTSESSAGDVELSSGLASQVGSRNWQIIGY*
Ga0070688_1007413862	3300005365	Switchgrass Rhizosphere	QADLTAEMVIHFSGHKNLDKPGVWVFAKFLVCLDCGCSHFTVPESELASIAHALEISSVMESSAGGVALSSGVASHVGS*
Ga0070667_1013233271	3300005367	Switchgrass Rhizosphere	MSCLLCGSGNEAELTAEMVIHFSGLKNLDIPGVWVFPKLFVCLDCGYSHFTVPQRELDSIAHTLEISSPTSESSAGSRTQ*
Ga0070667_1019413321	3300005367	Switchgrass Rhizosphere	MFCLLCGSDNQAELTAEMVIHFSGIKNLDKPGVWVFAKFLVCLDCGCSHFTLPEGKLASIAHTLETSSPTLDSSAGDVALSSGVPS*
Ga0070714_1008937212	3300005435	Agricultural Soil	MSCQLCRSSNEAELSAEMVIHFSGLKNLDKPGVWLFAKFLVCLDCGCSRFTVPEGKLASIAHTLEISSPRLESSAGDLALSSGVASQVGS*
Ga0070711_1000043292	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSCLLCGSGNQEELTAEMVIHFSGLKNLDKPGVWLFLKLLVCLDCGCSHFTVPERALASIAHTLEIRSPSLESSAGDVPLSDGIASQVGS*
Ga0070711_1004010951	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSCQLCGSGNEAEFASEMIIHFAGLKNLDKPGVWVFSNVLACLKCGCSRFTVPKAELESIAKNTREDKSSTFESSAGDVPLMSGIASQVER*
Ga0070711_1008792801	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSCLLCGSGSQTEVIAEMVVHLSGLKNLDNPGVLVVSKVLVCLDCGSSHFTVPKKELASIAKNTREDKSSTLKSSAFDVPLSGGNATQVGS*
Ga0070708_1010416273	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSLMSCLSCGSDNQAELTAEMVIHFSGIKNLDKPGVWVFAKFLVCLDCGCSHFTLPEGKLASIAHTLETSSPTLDSSAGDVALSSGVPS*
Ga0068867_1002958453	3300005459	Miscanthus Rhizosphere	MSCLLCGSGNEAELTAEMVIHFSGLKNLDIPGVWVFPKLFVCLDCGYSHFTVPQRELDSIAHTLEISSLTSESSAGDVALCRGVASQVGSRNWQFIGY*
Ga0070706_1001813763	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSLMSCLSCGSDNQAELTAEMVIHFSGIKNLDKPGVWVFAKFLVCLDCGCSHFTLPEGKLASIAHTPETSSPTLDSSAGDVALSSGVPS*
Ga0073909_100138212	3300005526	Surface Soil	MYMGNLLSRDNQRGLAVVNQRMEALMSCQLCGSGDEAELTAEMIIHFSGLKNLDKPGVWVFPKLLVCLNCGCSHFTVPESELASISSTLESSTGDVPLSGGNASQVGN*
Ga0068853_1005583171	3300005539	Corn Rhizosphere	MPCLLCGSSNQAELTGEIVIHFSGLKNLDKPDVWVFPKLFVCLDCTYSHFTVPQRELDSIAHTLEISSPTSESSAGDVELSSGLASQVGSRNWQIIGY*
Ga0068853_1008004282	3300005539	Corn Rhizosphere	MSCLLCRSGNQADLTAEMVIHFSGHKNLDKPGVWVFAKFLVCLDCGCSHFTVPESELASIAHALEISSAMESSAGGVALSSGVASHVGS*
Ga0068853_1018209581	3300005539	Corn Rhizosphere	MSCLLCGSGNQAELSCEMVIHFSGLKNLEKPGVWLFPKLLVCLDCGCSHFTVPERELASIARTLEISSPTLDSSAGDVALSSGVASQVGSRNWRLLMGY*
Ga0070686_1007995122	3300005544	Switchgrass Rhizosphere	MSCLLCGSGNEAELTGEIVIHFSGLKNLDKPGVWVFPKLFVCLDCGYSHFTVPQRELDSIAHTLEISSLTSESSAGDVALCRGVASQVGSRNWQFIGY*
Ga0070665_10000100112	3300005548	Switchgrass Rhizosphere	MSCLLCRSGNQADLTAEMVIHFSGHKNLDKPGVWVFAKFLVCLDCGCSHFTVPESELASIAHALEISSVMESSAGGVALSSGVASHVGS*
Ga0070665_1013055131	3300005548	Switchgrass Rhizosphere	MPCLLCGSGNEAELTGEIVIHFSGLKNLDKPGVWVFPKLFVCLDCGYSHFTVPQRELDSIAHTLEISSLTSESSAGDVALCRGVASQVGSRNWQFIGY*
Ga0070704_1004637462	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MSCLVCGSGNQAERSAEMVIHFSGRENLDTPGAWVFPKLLVCLDCGFSHFTLQKTELAGVAKDTREDKFSALEASAGDVPLSGGSASQVGS*
Ga0068866_101793732	3300005718	Miscanthus Rhizosphere	MSCLLCGSGNEAELTGEIVIHFSGLKNLDKPGVWVFPKLFVCLDCGYSHFTVPQRELDSIAHTLEISSLTSESSAGDVALCRRVASQVGSRNWQFIGY*
Ga0068863_1000031662	3300005841	Switchgrass Rhizosphere	MSCLLCGSGNEAELTGEIVIHFSGLKNLDKPGVWVFPKLFVCLDCGYSHFTVPQRELDSIAHTLEISSSTSESSAGDVELSSGLASQVGSRNWRFIGY*
Ga0068860_1000872312	3300005843	Switchgrass Rhizosphere	MSCLLCGSGNQAELTAEMLIHFSGLKNLDKSGVWVFPKLLVCLSCGCSHFTVPERELASIAHTLEISSPKSESSAGDVELSSGVASQVGSRNW*
Ga0068860_1006384811	3300005843	Switchgrass Rhizosphere	MSCLLCGSGNQAELSCEMVIHFSGLKNLEKPGVWLFPKLLVCLDCGCSHFTVPERELASIARTLEISSPTLDSSAGDVALSSGIASQVGSRNWRLLMGY*
Ga0070715_109967702	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MSCLLCGSGNEAELTGEIVIHFSGLKNLDKPGVWVFPKLFVCLDCGYSHFTVPQRELDSIAHTLEISSPTSESSAGDVELSSGLASQVGSRNW
Ga0070716_1001636141	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSCLLCGSGNQAELTAEMVIHFSGLKNLDKPGVWVFPKLLVCLDCGCSHFTVPERELASIARTLEISSPTLESSAGDVALSSGLRRRSEVEIGSCLWVTDK
Ga0070712_1002522352	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSCLLCGSGNHAELTAEMVIHFSGLKNLDKPGVWVFPKKLLVCLDCGCSHFIVPKTELASLAKDTREDKSFTLASGAGDVPLNAGNATQVAS*
Ga0070712_1008221442	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MHTVFTLRPAPTRMEVFMSCQLCRSSNEAELSAEMVIHFSGLKNLDKWRLVIREVFGLIGLRLLRFTVPEGKLASIAHTLEISSPRLESSAGDLALSSGVASQVGS*
Ga0070712_1011489841	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSCQSCGSGNEAELDAEMIIHFSGLKNLDKPGVWAFSKVLVCLDCGSSHVTVPKTKLASIAKGTLEDKSSTLESSAGDVALSGGGASQVGSRN*
Ga0097621_1000854122	3300006237	Miscanthus Rhizosphere	MSCLLCGSGNEAELTAEMVIHFSGLKNLDIPGVWVFPKLFVCLDCGYSHFTVPQRELDLIAHTLEISSPTSESSAGDVELSSGLASQVGSRNWQFIGY*
Ga0097621_1014212161	3300006237	Miscanthus Rhizosphere	LMSCQLCGSGNETELAAEMIIHFTGLRNLDKPGVWVFAKLLVCLDCGCSQFTVPERELVSIARTPEDKSSPLESSDWRSHAQ*
Ga0068871_1003882752	3300006358	Miscanthus Rhizosphere	MSCQLCGSGNETELAAEMIIHFTGLRNLDKPGVWVFAKLLVCLDCGCSQFTVPERELVSIARTPEDKSSPLESSDWRSHAQ*
Ga0075433_102139671	3300006852	Populus Rhizosphere	MSCLSCGSDNQAELTAEMVIHFSGIKNLDKPGVWVFAKFLVCLDCGCSHFTLPEGKLASIAHTLETSSPTLDSSAGDVALSSGVAS*
Ga0075434_1002224203	3300006871	Populus Rhizosphere	MSCLSCGSDNQAELTAEMVIHFSGIKNLDEPGVWVFAKFLVCLDCGCSHFTLPEGKLASIAHTLETSSPTLDSSAGDVALSSGVAS*
Ga0075434_1005279652	3300006871	Populus Rhizosphere	MSCLLCGSGNEAELTGEIVIHFSGLKNLDKPGVWVFPKLFVCLDCGYSHFTVPQGELDSIAHTLEISSPTSESSAGDVELSSGLASQVGSRNWRFIGY*
Ga0068865_1002481832	3300006881	Miscanthus Rhizosphere	MSCLLCRSGNQADLTAEMVIHFSGHKNLDKPGVWVFAKFLVCLDCGCSHFTVPESELASIAHVLEISSAMESSAGGVALSSGVASHVGS*
Ga0068865_1004235311	3300006881	Miscanthus Rhizosphere	VGVSLILVRRLLMSCLLCGSGNQAELSCEMVIHFSGLKNLEKPGVWLFPKLLVCLDCGCSHFTVPERELASIARTLEISSPTLDSSAGDVALSSGVASQVGSRNWRLLMGY*
Ga0075424_1002175993	3300006904	Populus Rhizosphere	MSCLSCGSDNQAELTAEMVIHFSGIKNLDKPGVWVFAKFLVCLECGCSHFTLPEGKLASIAHTLETSSPTLDSSAGDVALSSGVAS*
Ga0099791_106588802	3300007255	Vadose Zone Soil	MSCLLCGSGNQAELTAEMVIHFSGLKNLDKRGVWIFPKPLLVCLDCGCSRFTVSVRELASIAKDTREDKLSLFESSTGDVLLSGGSASQVGS*
Ga0105245_131821831	3300009098	Miscanthus Rhizosphere	MSCLLCGSGNEAELTGEIVIHFSGLKNLDKPDVWVFPKLFVCLDCAYSHFTVPQRELDSIAHTLEISSPTSESSAGDVELSSGLASQVGSRNWQFMGY*
Ga0105247_101559502	3300009101	Switchgrass Rhizosphere	MSCLLCGSGNQAELSCEMVIHFSGIKNLDKPGVWVFAKFLVCLDCGCSHFTLPEGKLASIAHTLETSSPTLDSSAGDVALSSGVPS*
Ga0105243_104998472	3300009148	Miscanthus Rhizosphere	MSCLLCGSGNEAELTGEIVIHFSGLKNLDKPDVWVFPKLFVCLDCAYSHFTVPQRELDSIAHTLEISSPTSESSAGDVELSSGLASQVGSRKWQIIGY*
Ga0105241_114034681	3300009174	Corn Rhizosphere	MSCLSCGSDNQAELTAEMVIHFSGIKNLDKPGVWVFAKFLVCLDCGCSHFTLPEGKLASIAHTPETSSPTLDSSAGDVALSSGVPS*
Ga0105241_117884522	3300009174	Corn Rhizosphere	NEAELTAEMVIHFSGLKNLDIPGVWVFPKLFVCLDCGYSRFTVPQRELDSIAHTLEISSPTSESSAGDVELSSGLASQVGSRNWQFIGY*
Ga0105242_100453104	3300009176	Miscanthus Rhizosphere	MPCLLCGSSNQAELTGEIVIHFSGLKNLDKPDVWVFPKLFVCLDCTYSHFTVPQRELDSIARTLEISSPTSESSAGDVELSSGLASQVGSRNWQIIGY*
Ga0105249_116465761	3300009553	Switchgrass Rhizosphere	MSCLLCGSGNEAELTGEIVIHFSGLKNLDKPGVWVFPKLFVCLDCGYSHFTVPQRELDSIAHTLEISSPTSESSAGSRTQ*
Ga0126384_102678362	3300010046	Tropical Forest Soil	MSCLLCGSVNQAELTAEMLIHFSGLKNLDKPGVWVFPKVFVCLDCGYSHFTVPERELASIAHTLGISSSTLESSAGDVALSCRLRLRSGVEISKLPIGY*
Ga0137392_110403752	3300011269	Vadose Zone Soil	MSCLLCGSGNQAELTGEMIIHFSGLRNLDKPGVWVFPKLLVCLDCGCSHFTVPERELASIAHTLEISSPTLGSSAGDVAQSGLRSEVEIGS*
Ga0137382_107927412	3300012200	Vadose Zone Soil	MSCLLCGSGNQAELAAEMVIHFSGLKNLDKPGVWVFPKLLLVCLDCGCSRFTVPARELASIAKDTREDKLSTFESSAGDVPLSGGVASQVGT*
Ga0157355_10399741	3300012493	Unplanted Soil	MSCLLCGSGNEAELTGEIVIHFSGLKNLDKSGVWVFPKLFVCLDCGYSHFTVPQRELDSIAHTLEISSPTSESSAGDVELSSGLASQVGSRNWRFIGY*
Ga0157314_10179552	3300012500	Arabidopsis Rhizosphere	MSCLLCGSGNEAELTAEMVIHFSGLKNLDIPGVWVFPKLFVCLDCGYSHFTVPQRELDFIAHTLEISSPTSESSAGDVELSSGLASQVGSRNW
Ga0137359_105526442	3300012923	Vadose Zone Soil	VSCLLCGSGNQAQLTGEMIIHFSGLRNLDKPGVWVFPKLLVCLDCGCSHFTVPEKELASIAHTLEISSPTLGSSAGDVAQSSLRSEIEIGS*
Ga0137413_116060401	3300012924	Vadose Zone Soil	MSCLLCGSGNRAELTAEMIIHFSGLKNLDKPGVWVFPKLLLVCLDCGCSRFTVPARELASIANDTREDKLSTFESSAGDVPLSGGVASQVGS*
Ga0137404_102317381	3300012929	Vadose Zone Soil	MSCLLCGSDNRAELTAEMIIHFSGLKNLDKPGVWVFPKLLVCLDCGCSHFTVPERELASIAYTLEISSPTLGSSAGDVAQSGLRSEVEIGS*
Ga0164298_107844571	3300012955	Soil	MSCQLCGSGNETELAAEMIIHFSGLRNLDKPGVWVFAKLMVCLDCGCSQFTVPERELASIARTPENKSSPLESSAWRSHVQ*
Ga0164305_103838062	3300012989	Soil	MSCQLCGSGNETELAAEMIIHFSGLRNLDKPGVWVFAKLMVCLDCGCSQFTVPERELVSIARTPEDKSSPLESSDWRSHAQ*
Ga0157378_103971022	3300013297	Miscanthus Rhizosphere	MSCLLCGSGNEAELTAEMVIHFSGLKNLDIPGVWVFPKLFVCLDCGYSHFTVPQRELDSIAHTLEISSPTSESSAGDVELSSGLASQVGSRNWQIIGY*
Ga0157375_105576842	3300013308	Miscanthus Rhizosphere	MSCLLCGSGNQAELSCEMVIHFSGLKNLDKSGVWVFPKLFVCLDCGYSHFTVPQRELDSIAHTLEISSPTSESSAGDVELSSGLASQVGSRNWRFIGY*
Ga0132258_101150881	3300015371	Arabidopsis Rhizosphere	MVIHFSGLKNLDKPGVWVFPKKLLVCLDCGCSHFIVPKTELASLAKDTREDKSFTLASGAGDVPLNAGNATQVAS*
Ga0132258_115466803	3300015371	Arabidopsis Rhizosphere	MPCLLCGSSNQAELTGEIVIHFSGLKNLDKPDVWVFPKLFVCLDCAYSHFTVPQRELDSIAHTLEISSPTSESSAGSRTQ*
Ga0132256_1028164582	3300015372	Arabidopsis Rhizosphere	MSCLLCGSGNEAELTGEIVIHFSGLKNLEKPGVWVCPKLFVCLDCGYSHFTVPQRELDSIAHTLEISSPTSESSAGDVELSSGLASQVGSRNWQFIGY*
Ga0132256_1032193121	3300015372	Arabidopsis Rhizosphere	MSCQLCRSSHEAELAAEMVIHFSGLKNLDQPGVWLFAKFLVCLDCGCSHFTVPKEKLSSIAHTLQISSPPLELSAGAVALSSG
Ga0132257_1000744282	3300015373	Arabidopsis Rhizosphere	MSCLLCGSGNEAELTGEIVIHFSGLKNLDKSGVWVFPKLFVCLDCGYSHFTVPQRELDSIAHTLEISSPTSESSAGDVELSSGLASQVGSRNWQFIGY*
Ga0132255_1003894412	3300015374	Arabidopsis Rhizosphere	MSCLLCGSGNEAELTGEIVIHFSGLKNLDKSGVWVFPKLFVCLDCGYSHFTVPQRELDLIAHTLEISSPTSESSAGDVELSSGLASQVGSRNWQFIGY*
Ga0132255_1023684422	3300015374	Arabidopsis Rhizosphere	MSCQLCRSSHEAELAAEMVIHFSGLKNLDQPGVWLFAKFLVCLDCGCSHFTVPKEKLSSIAHTLQISSPPLELSAGAVALSSGGRTQVGS*
Ga0132255_1036396381	3300015374	Arabidopsis Rhizosphere	MSCLSCGSDNQAELTAEMVIHFSGIKNLDKPGVWVFAKFLVCLDCGCSHFTLPEGKLASIAHTLKTSSPTLDSSAGDVALSSGVAS*
Ga0179592_102439041	3300020199	Vadose Zone Soil	MSCLLCGSGNQAKLTAEMVIHFSGLKNLDKRGVWIFPKPLLVCLDCGCSRFIVSVRELASIAKDTREDKLSLFESSTGDALLSGGSASQVGS
Ga0179592_103771501	3300020199	Vadose Zone Soil	VSCLLCGSGNQAELTGEMIIHFSGLRNLDKPGVWVFPKLLVCLDCGCSHFTVPERELASIAHTLEISSPTLESSAGDVAR
Ga0210407_100830214	3300020579	Soil	MSCQLCRSSNEAELTAEMVIHFSGLKNLDKPGVWLFPKLLVCLNCGCSRFTVPQGKLASIAHTREIGSLTLESSADDVTLSSGVASQVGS
Ga0210403_100448322	3300020580	Soil	MSCQLCGSGNEAELASEMIIHFSGPRNLDKPGVWVFSNVLVCLDCGCSHFTVPKTELASIAKDTLEDQFSTLESSAGDVPLSGGSASEVGS
Ga0210406_100051647	3300021168	Soil	MSCLLCGSGNQAELTAEMVIHFSGLKNVDKPGFWVFPKLLLVCLDCGCSHFTVPARELASIAKDTREDKSSTLESSAGDVPLSVGIASQVGS
Ga0210392_106599892	3300021475	Soil	MSCLLCGSDNQTEFTAEMCIHFSGLKNLDKPGVWVFPKLLVCLECGCSHFTVPERELASVAEVTREDKSSTLESSAGEVPLSGGNAFQVGSQN
Ga0210402_102191603	3300021478	Soil	MSCLLCGSDNQTEFTAEMCIHFSGLKNLDKPGVWVFPKLLVCLECGCSHFTVPERELASVAEVTREDKSSTLESSAGEVPLSGGNAFQVGSQNWQLLIGY
Ga0247664_10185271	3300024232	Soil	MSCQLCRSSHEAELAAEMVIHFSGLKNLDQPGVWLFAKFLVCLDCGCSHFTVPKEKLSSIAHTLQISSPPLELSAGAVALSSGGRTQVGS
Ga0179589_100060691	3300024288	Vadose Zone Soil	CLLCGSGNQAELTAEMVIHFSGLKNLDKPGVWVFPKLLLVCLDCGCSRFTVPARELASIAKDTREDRLSTFESSARDVPLSRGSASQVGS
Ga0247668_10694792	3300024331	Soil	MSCLLCGSGNEAELTGEIVIHFSGLKNLDKPGVWVFPKLFVCLDCGYSHFTVPQRELDSIAHTLEISSPTSESSAGDVELSSGLASQVGSRNWRFIGY
Ga0179591_11209961	3300024347	Vadose Zone Soil	MSCLLCGSDNRAELTAEMLIHFSGLKSLANPGVWVFPKLLVCLDCGCSHFTVPERELASIAYTLEISSPTLGSSAGDVAQSGLRSEVEIGS
Ga0207692_103938842	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MSCQLCGSGNEAELASEMVIHFSGLENLDKPGVWVFSKLLVCLDCGSSHFTVPKTELASIAKGTLEDKYSTLEPSAGDVALSCGIASQVGS
Ga0207710_101831971	3300025900	Switchgrass Rhizosphere	MSCLLCRSGNQADLTAEMVIHFSGHKNLDKPGVWVFAKFLVCLDCGCSHFTVPESELASIAHALEISSAMESSAGGVALSSGVASHVGS
Ga0207684_103255683	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSLMSCLSCGSDNQAELTAEMVIHFSGIKNLDKPGVWVFAKFLVCLDCGCSHFTLPEGKLASIAHTPETSSPTLDSSAGDVALSSGVPS
Ga0207654_109074091	3300025911	Corn Rhizosphere	EFTGEIVIHFSGLKNLDKPGVWVFPKLFVCLDCGYSHFTVPQRELDSIAHTLEISSPTSESSAGDVELSSGLASQVGSRNWQFIGY
Ga0207671_105315041	3300025914	Corn Rhizosphere	MSCLLCGSGNQAELSCEMVIHFSGLKNLEKPGVWLFPKLLVCLDCGCSHFTVPERELASIARTLEISSPTLDSSAGDVALSSGVASQVGSRNWRLLMGY
Ga0207693_102810191	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MPCLLCASDNQAELTAETVIHFSGLKNLDKPGVWVFPKLLVCLDCGCSHFTVPERELASIARTLEISSPTLESSAGDVALSSGLRRRSEVEI
Ga0207693_109740731	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LILARRPFMSCLLCGSGNQAELTAEMVIHFSGLKNLDKPGVWVFPKKLLVCLDCGCSHFIVPKTELASLAKDTREDKSFTLASGAGDVPLNAGNATQVAS
Ga0207709_101778903	3300025935	Miscanthus Rhizosphere	MSCLLCGSGNEAELTGEIVIHFSGLKNLDKPDVWVFPKLFVCLDCAYSHFTVPQRELDSIAHTLEISSPTSESSAGSRTQ
Ga0207669_111409442	3300025937	Miscanthus Rhizosphere	MSCLLCGSGNEAELTGEIVIHFSGLKNLDKPGVWVFPKLFVCLDCGYSHFTVPQRELDSIAHTLEISSPTSESSAGDVELSSGLASQVGSRNWQIIGY
Ga0207689_103161901	3300025942	Miscanthus Rhizosphere	MSCLLCRSGNQADLTAEMVIHFSGHKNLDKPGVWVFAKFLVCLDCGCSHFTVPERELASIARTLEISSPTLDSSAGDVALSSGVASQVGSRNWRLLMGY
Ga0207712_101680732	3300025961	Switchgrass Rhizosphere	MSCLLCGSGNQAELSCEMVIHFSGLKNLEKPGVWLFPKLLVCLDCGCSHFTVPESELASIAHALEISSAMESSAGGVALSSGVASHVGS
Ga0207641_1000739818	3300026088	Switchgrass Rhizosphere	MSLMSCLSCGSDNQAELTAEMVIHFSGIKNLDKPGVWVFAKFLVCLDCGCSHFTLPEGKLASIAHTLETSSPTLDSVL
Ga0179593_12017373	3300026555	Vadose Zone Soil	VSCLLCGSGNQAELTGEMIIHFSGLRNLDKPGVWVFPKLLVCLDCGCSHFTVPEKELASIAHTLEISSPMLESSAGDVAQSLSQVGS
Ga0179587_107063832	3300026557	Vadose Zone Soil	MSCLLCESGNQAELTAEMVIHFSGLKNLDKPGVWVFPQLLLVCLDCGCSRFTVPARELASIAKDTREDKLSTFELSAGDVPLSGGSASQVGS
Ga0209729_10532661	3300027061	Forest Soil	VHTVFTLRPAPTRMEVIMSCQLCRSSNEAELTAEMVVHFSGLKNLDKPGVWLFPKLLVCLNCGCSRFTVPQGKLASIAHTREIGSPTLESSADDVTLSSRVASQVGG
Ga0209214_10112671	3300027071	Forest Soil	MSCQLCRSSNEAELTAEMVIHFSGLKNLDKPGVWLFPKLLVCLNCGCSRFTVPQGKLASIAQTREIGSPTLESSADDVTLSSGVASQVGS
Ga0209811_100076721	3300027821	Surface Soil	MSCQLCGSGNETELAAEMIIHLSGLRNLDKPGVWVFAKLMVCLDCGCSQFTVPERELASIARTPENKSSPLESSAWRSHAQ
Ga0209811_103149932	3300027821	Surface Soil	MYMGNLLSRDNQRGLAVVNQRMEALMSCQLCGSGDEAELTAEMIIHFSGLKNLDKPGVWVFPKLLVCLNCGCSHFTVPESELASISSTLESSTGDVPLSGGNASQVGN
Ga0247684_10670741	3300028138	Soil	MSCQLCRSSHEAELAAEMVIHFSGLKNLDQPGVWLFAKFLVCLDCGCSHFTVPKEKLSSIAHTLQISSPPLELSAGAVALSSGGRTQV
Ga0268266_100013854	3300028379	Switchgrass Rhizosphere	MSCLLCRSGNQADLTAEMVIHFSGHKNLDKPGVWVFAKFLVCLDCGCSHFTVPESELASIAHALEISSVMESSAGGVALSSGVASHVGS
Ga0268264_100998716	3300028381	Switchgrass Rhizosphere	MSCLLCGSGNQAELTAEMLIHFSGLKNLDKSGVWVFPKLLVCLSCGCSHFTVPERELASIAHTLEISSPKSESSAGDVELSSGVASQVGSRNW
Ga0268264_124019131	3300028381	Switchgrass Rhizosphere	MSCLLCGSGNQAELSCEMVIHFSGLKNLEKPGVWLFPKLLVCLDCGCSHFTVPERELASIARTLEISSPTLDSSAGDVALSSGIASQVGSRNWRLLMGY
Ga0170834_1038267212	3300031057	Forest Soil	MSCPLCGSGNQAELTAEMVIHFSGLKNLDKPGVWVFSELLVCLDCGCSHFTVPERKLLSIAHTLENKSSMLESIAWRDGVGS
Ga0170834_1071582591	3300031057	Forest Soil	MSCLLCGSGNEAELVSEMIIHFSGHKNLDKPGVWVFSNVWVCLDCGCSHFTVPKTELESIAKGTREDKFSTLESSAGDVPLSGGSASQGGSWFLIGY
Ga0170834_1085721501	3300031057	Forest Soil	LCGSGNQAELTAEMVIHFFGLKNLDKPGVWVFPELLVCLDCGCSHFTVPKTEMESIAKGTLEDKFSTLELSAGDVPLSGGIATQVGS
Ga0170822_130784941	3300031122	Forest Soil	MSCQLCGSGNQAELTAETIIHFSGLKNLDKPGVWVFSKVLVCLDCGSSHFTVPKTELASIAKDTLEDKFSTLESSAGD
Ga0170823_131902861	3300031128	Forest Soil	MSCQLCGSGNQAELTAETIIHFSGLKNLDKPGFWVFSNVLVCLDCGCSHFTVPKTKLESIAYTLENKSSMLESSA
Ga0170823_172605802	3300031128	Forest Soil	MSCQLCGSGNEVELDAEMIIHFSGPKNLDKPGVWVFPNVLVCLDCGCSRFTVPARQLASIAKDTREDKSSTLEPSAGDVPLSGVRIGH
Ga0170824_1015150841	3300031231	Forest Soil	MSCPSCGSGNQAEFTAEMLIHFSGFKNLDKPGVWVFPELLVCLDCGCSHFTVPERKLLSIAHTLEDKFSTLESSAGDVPLSG
Ga0170824_1070242652	3300031231	Forest Soil	MSCLLCGSGNQAQLTAEMLIHFSGLENLDKPAFWLFPKLLVCLDCGYAHFAVPNGELVSISSTLASSAGEVPVSDGSASRVRN
Ga0170824_1085653311	3300031231	Forest Soil	NQADPTAAMVNHFSGLKNLDNPGVWVFSKVLVCLDCGSSHVTVPKTKLASIAKGTLEDKSSTLESSAGDVALSGGGASQVGSRN
Ga0170824_1137749752	3300031231	Forest Soil	LLCGSGNQAELTAEMVLHFSGLKNVDKPGVWVFPDVLVCLDCGCSRFTVPARQLASIAKDTREDKSSTLEPSAGDVPLSGVRIGH
Ga0170824_1148319402	3300031231	Forest Soil	LESPLGVYKANLLSRPARSIDVFNRRMEALMFCLLCGSGNQAELTVEMVIHFSGLKNVDKPGFWVFPKLLLVCLDCGCSHFTVPARKLASIAKGTLEDKFSTLELSAGDVPLSGGIATQVGS
Ga0170824_1164475432	3300031231	Forest Soil	MSCRICGSGNQAKLTAEMVIHFSGLKNLDELGVWVFPKLLVCLDCGCSHFTVPERELASIVKVSREDHSSTLESSAVDVPLSGGIASQMGS
Ga0170820_137168072	3300031446	Forest Soil	LESPLGVYKANLLSRPARSIDVFNRRMEALMFCLLCGSGNQAELTVEMVIHFSGLKNVDKPGFWVFPKLLLVCLDCGCSHFTVPTTELESIAKGTLEDKFSTLESSAGDVPLSGGIASPVGS
Ga0170820_146765481	3300031446	Forest Soil	MSCLLCGSGNRAELTAEMVIHFSGLKNLDKPGVWVFPELLVCLDCGCSHFTVPKTELASIAYTLEDKSSTLESSAGDVALSGGIASRVGS
Ga0170818_1017307691	3300031474	Forest Soil	MSCQLCGSGNEAELASEMIIHFSGLKNLDKPGVWVFSNVLACLKCGCSHFTIPKAELESIGKNTREDKSSTFEPSAGGVPLISGIASQVES
Ga0170818_1125683342	3300031474	Forest Soil	MSCLLCGSGNRAELTAEMVIHFSGLKNLDKPGVWVFPELLVCLDCGCAHFTVPKTELASIAYTLEIKSFAFESSVADVPLC
Ga0307469_103150551	3300031720	Hardwood Forest Soil	MSCLLCGSGNQAELTGEIVIHFSGLKNLDKAGVWVFPKLFVCLDCGYSHFTVPQRELDSIAHTLEISSRTSESSAGDVELSSGLASQVGSRNWQFIGY
Ga0307469_109911642	3300031720	Hardwood Forest Soil	ALMSCQLCGSGNEVEFASEMIIHFSGLKNLDKPGVWVFSNVLACLKCGCSHFTVPKTELESIAKNTREDKSSTFESSAGDVPLISGIASQVER
Ga0307473_115176471	3300031820	Hardwood Forest Soil	SLAPEFIGVFNLAPEALMSCLLCGSGNQAELTAEMVIHFSGLKNLEKPGVWVFAKFLVCLDCGCSHFTVPERELASIARTLEISSSPLESSAGDVTLRSGVASQVGS
Ga0307470_100262771	3300032174	Hardwood Forest Soil	MPCLLCGSGNQAELTAEMVIHFSGLKNLDKSGVWVFPKLLVCLDCGCSHFTVPERELASIARTLEISSPTLESSPGDVALS
Ga0307470_112287301	3300032174	Hardwood Forest Soil	MHTVFTLRPAPARMEVIMSCQLCRSSNEAELTAEMVIHFSGLKNLDKPGVWLFLKFLVCLDCGCSRFTVPEGKLASIAHTLEISSPTLESSAGDVALSSGVASQVGS
Ga0307470_117968161	3300032174	Hardwood Forest Soil	SEMVIHFSGLKNLDKPGVWVFSKLLVCLDCGSSHFTVPKTELASIAKGTLEDKYSTLKSSAGDVALSCGIASQVGS
Ga0307471_1001693112	3300032180	Hardwood Forest Soil	MSCLLCGSGNEAELTGEIVIHFSGLKNLDKPGVWVFPKLFVCLDCGYSHFTVPQRELDSIAHTLEISSPKSESSAGDVALSRGVASQVGSRNWQFMGY
Ga0307471_1020088332	3300032180	Hardwood Forest Soil	MSCQLCGSGNEVEFASEMIIHFSGLKNLDKPGVWVFSNVLACLKCGCSHFTVPKTELESIAKNTREDKSSTFESSAGDVPLISGIASQVER
Ga0307472_1008794072	3300032205	Hardwood Forest Soil	LTAEMVIHFSGLKNLDIPGVWVFPKLFVCLDCGYSHFTVPQRELDSIAHTLEISSRTSESSAGDVELSSGLASQVGSRNWQFMGY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F061297

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences