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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F061349 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 132 |
| Average Sequence Length | 45 residues |
| Representative Sequence | MSFLREMLSSDAKISSKRFVGFAAFFMLICSWGADTFSAFEVKD |
| Number of Associated Samples | 109 |
| Number of Associated Scaffolds | 132 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 97.73 % |
| % of genes near scaffold ends (potentially truncated) | 99.24 % |
| % of genes from short scaffolds (< 2000 bps) | 90.15 % |
| Associated GOLD sequencing projects | 99 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.39 |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (90.152 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (44.697 % of family members) |
| Environment Ontology (ENVO) | Unclassified (83.333 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (91.667 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 44.44% β-sheet: 0.00% Coil/Unstructured: 55.56% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.39 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 132 Family Scaffolds |
|---|---|---|
| PF06841 | Phage_T4_gp19 | 30.30 |
| PF04984 | Phage_sheath_1 | 12.88 |
| PF00120 | Gln-synt_C | 0.76 |
| PF07432 | Hc1 | 0.76 |
| COG ID | Name | Functional Category | % Frequency in 132 Family Scaffolds |
|---|---|---|---|
| COG3497 | Phage tail sheath protein FI | Mobilome: prophages, transposons [X] | 12.88 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 90.15 % |
| All Organisms | root | All Organisms | 9.85 % |
| Visualization |
|---|
| Powered by ApexCharts |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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| Habitat | Taxonomy | Distribution |
| Marine | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine | 44.70% |
| Marine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine | 19.70% |
| Seawater | Environmental → Aquatic → Marine → Strait → Unclassified → Seawater | 8.33% |
| Aqueous | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous | 3.03% |
| Seawater | Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater | 3.03% |
| Salt Marsh | Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh | 3.03% |
| Seawater | Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater | 2.27% |
| Deep Ocean | Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean | 1.52% |
| Seawater | Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater | 1.52% |
| Estuarine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine | 1.52% |
| Pelagic Marine | Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine | 1.52% |
| Seawater | Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater | 1.52% |
| Seawater | Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater | 0.76% |
| Marine | Environmental → Aquatic → Marine → Inlet → Unclassified → Marine | 0.76% |
| Seawater | Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater | 0.76% |
| Microbial Mat | Environmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat | 0.76% |
| Freshwater To Marine Saline Gradient | Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient | 0.76% |
| Sea-Ice Brine | Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine | 0.76% |
| Marine | Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine | 0.76% |
| Marine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine | 0.76% |
| Pelagic Marine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine | 0.76% |
| Marine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine | 0.76% |
| Marine, Hydrothermal Vent Plume | Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Marine, Hydrothermal Vent Plume | 0.76% |
| Visualization |
|---|
| Powered by ApexCharts |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000115 | Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011 | Environmental | Open in IMG/M |
| 3300001346 | Pelagic Microbial community sample from North Sea - COGITO 998_met_01 | Environmental | Open in IMG/M |
| 3300001450 | Marine viral communities from the Pacific Ocean - LP-53 | Environmental | Open in IMG/M |
| 3300002484 | Marine viral communities from the Pacific Ocean - ETNP_2_130 | Environmental | Open in IMG/M |
| 3300002488 | Marine viral communities from the Pacific Ocean - ETNP_2_60 | Environmental | Open in IMG/M |
| 3300003690 | Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Piccard2013-Plume - Viral/microbial metagenome assembly | Environmental | Open in IMG/M |
| 3300004639 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI048_120m_RNA (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300005430 | Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69 | Environmental | Open in IMG/M |
| 3300005431 | Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV75 | Environmental | Open in IMG/M |
| 3300005520 | Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV251 | Environmental | Open in IMG/M |
| 3300005521 | Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV255 | Environmental | Open in IMG/M |
| 3300005606 | Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV84 | Environmental | Open in IMG/M |
| 3300005969 | Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_Bottom_ad_4513_LV_A | Environmental | Open in IMG/M |
| 3300006735 | Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG | Environmental | Open in IMG/M |
| 3300006736 | Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG | Environmental | Open in IMG/M |
| 3300006738 | Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG | Environmental | Open in IMG/M |
| 3300006751 | Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG | Environmental | Open in IMG/M |
| 3300006789 | Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG | Environmental | Open in IMG/M |
| 3300006916 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 | Environmental | Open in IMG/M |
| 3300006919 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 | Environmental | Open in IMG/M |
| 3300006920 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 | Environmental | Open in IMG/M |
| 3300006921 | Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG | Environmental | Open in IMG/M |
| 3300006925 | Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG | Environmental | Open in IMG/M |
| 3300006927 | Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG | Environmental | Open in IMG/M |
| 3300007276 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 | Environmental | Open in IMG/M |
| 3300008050 | Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG | Environmental | Open in IMG/M |
| 3300009071 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 | Environmental | Open in IMG/M |
| 3300009467 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530 | Environmental | Open in IMG/M |
| 3300009543 | Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_20Mar14_M2_3um Metatranscriptome (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300009593 | Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome | Environmental | Open in IMG/M |
| 3300009605 | Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9 | Environmental | Open in IMG/M |
| 3300009790 | Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome | Environmental | Open in IMG/M |
| 3300010149 | Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG | Environmental | Open in IMG/M |
| 3300010150 | Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG | Environmental | Open in IMG/M |
| 3300010151 | Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaG | Environmental | Open in IMG/M |
| 3300010153 | Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG | Environmental | Open in IMG/M |
| 3300012953 | Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome | Environmental | Open in IMG/M |
| 3300017697 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2) | Environmental | Open in IMG/M |
| 3300017717 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25 | Environmental | Open in IMG/M |
| 3300017730 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 40 SPOT_SRF_2013-02-13 | Environmental | Open in IMG/M |
| 3300017733 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 49 SPOT_SRF_2013-12-23 | Environmental | Open in IMG/M |
| 3300017737 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11 (version 2) | Environmental | Open in IMG/M |
| 3300017744 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23 | Environmental | Open in IMG/M |
| 3300017745 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15 | Environmental | Open in IMG/M |
| 3300017750 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29 | Environmental | Open in IMG/M |
| 3300017751 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2) | Environmental | Open in IMG/M |
| 3300017755 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09 | Environmental | Open in IMG/M |
| 3300017768 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2) | Environmental | Open in IMG/M |
| 3300017782 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19 | Environmental | Open in IMG/M |
| 3300017967 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300018416 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300018424 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300020165 | Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1 | Environmental | Open in IMG/M |
| 3300020207 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101406AT metaG (spades assembly) | Environmental | Open in IMG/M |
| 3300020247 | Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556048-ERR598962) | Environmental | Open in IMG/M |
| 3300020387 | Marine microbial communities from Tara Oceans - TARA_B100000405 (ERX556119-ERR599023) | Environmental | Open in IMG/M |
| 3300020404 | Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX555954-ERR598978) | Environmental | Open in IMG/M |
| 3300020408 | Marine microbial communities from Tara Oceans - TARA_B100000925 (ERX555963-ERR599118) | Environmental | Open in IMG/M |
| 3300020417 | Marine microbial communities from Tara Oceans - TARA_B100000073 (ERX556034-ERR599082) | Environmental | Open in IMG/M |
| 3300020421 | Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556005-ERR599007) | Environmental | Open in IMG/M |
| 3300020428 | Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094) | Environmental | Open in IMG/M |
| 3300020431 | Marine microbial communities from Tara Oceans - TARA_B100001142 (ERX556101-ERR598983) | Environmental | Open in IMG/M |
| 3300020435 | Marine microbial communities from Tara Oceans - TARA_B100000586 (ERX556070-ERR599086) | Environmental | Open in IMG/M |
| 3300020442 | Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162) | Environmental | Open in IMG/M |
| 3300020457 | Marine microbial communities from Tara Oceans - TARA_B100001113 (ERX555941-ERR599014) | Environmental | Open in IMG/M |
| 3300020467 | Marine microbial communities from Tara Oceans - TARA_B100000945 (ERX555966-ERR598957) | Environmental | Open in IMG/M |
| 3300020468 | Marine microbial communities from Tara Oceans - TARA_A100000164 (ERX555914-ERR598993) | Environmental | Open in IMG/M |
| 3300020470 | Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053) | Environmental | Open in IMG/M |
| 3300020474 | Marine prokaryotic communities collected during Tara Oceans survey from station TARA_151 - TARA_B100001564 (ERX555957-ERR598976) | Environmental | Open in IMG/M |
| 3300021084 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 12015 | Environmental | Open in IMG/M |
| 3300021356 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245 | Environmental | Open in IMG/M |
| 3300021389 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127 | Environmental | Open in IMG/M |
| 3300024255 (restricted) | Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MG | Environmental | Open in IMG/M |
| 3300024346 | Whole water sample coassembly | Environmental | Open in IMG/M |
| 3300025086 | Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025096 | Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025099 | Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025102 | Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025125 | Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes) | Environmental | Open in IMG/M |
| 3300025127 | Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes) | Environmental | Open in IMG/M |
| 3300025131 | Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes) | Environmental | Open in IMG/M |
| 3300025132 | Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes) | Environmental | Open in IMG/M |
| 3300025133 | Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025137 | Marine viral communities from the Pacific Ocean - LP-32 (SPAdes) | Environmental | Open in IMG/M |
| 3300025138 | Marine viral communities from the Pacific Ocean - LP-40 (SPAdes) | Environmental | Open in IMG/M |
| 3300025151 | Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes) | Environmental | Open in IMG/M |
| 3300025168 | Marine viral communities from the Pacific Ocean - LP-53 (SPAdes) | Environmental | Open in IMG/M |
| 3300025282 | Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9 (SPAdes) | Environmental | Open in IMG/M |
| 3300025676 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_100m_DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300026193 | Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF47B (SPAdes) | Environmental | Open in IMG/M |
| 3300026199 | Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV51 (SPAdes) | Environmental | Open in IMG/M |
| 3300026256 | Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV76 (SPAdes) | Environmental | Open in IMG/M |
| 3300026257 | Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69 (SPAdes) | Environmental | Open in IMG/M |
| 3300026260 | Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67 (SPAdes) | Environmental | Open in IMG/M |
| 3300027631 | Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 (SPAdes) | Environmental | Open in IMG/M |
| 3300027779 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes) | Environmental | Open in IMG/M |
| 3300027906 | Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes) | Environmental | Open in IMG/M |
| 3300028125 | Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - SB | Environmental | Open in IMG/M |
| 3300028175 | Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_135m | Environmental | Open in IMG/M |
| 3300028418 | Seawater microbial communities from Monterey Bay, California, United States - 16D | Environmental | Open in IMG/M |
| 3300029319 | Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516 | Environmental | Open in IMG/M |
| 3300029448 | Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082 | Environmental | Open in IMG/M |
| 3300031510 | Marine microbial communities from water near the shore, Antarctic Ocean - #129 | Environmental | Open in IMG/M |
| 3300031886 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416 | Environmental | Open in IMG/M |
| 3300032011 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416 | Environmental | Open in IMG/M |
| 3300032032 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 32315 | Environmental | Open in IMG/M |
| 3300032127 | Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB9_Tmax_529 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300032277 | Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotite | Environmental | Open in IMG/M |
| 3300032278 | Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| DelMOSum2011_101435933 | 3300000115 | Marine | MSFLREMLSSDAKISSKRFVGFMAFFMLICSWGADTFSTFE |
| JGI20151J14362_100972353 | 3300001346 | Pelagic Marine | MSFLREMLSSDAKISSKRFVGFAAFFMLICSWGADTFSAFEVKDKILECFMYISV |
| JGI24006J15134_100393554 | 3300001450 | Marine | MGFLTDMLSSDAKISSKRTVGFAAFFMLICCWGADTFTAFEVKDKILECFMLK* |
| JGI24006J15134_101558642 | 3300001450 | Marine | MGFLTQMLSSEAKISSKRTVGFAAFIMLMASWGADTFSGFEVKDKILEC |
| JGI24006J15134_101772851 | 3300001450 | Marine | MGFLTEMLSSEAKISSKRTVGFAAFIMLMASWGADTFSG |
| JGI24006J15134_101817112 | 3300001450 | Marine | MGFLQEMLSSEAKISSKRTVGFAAFIMLMASWGADTFSGFEVK |
| JGI24006J15134_102270922 | 3300001450 | Marine | MGFLTQMLSSEAKISSKRTVGFAAFIMLMASWGADTFSGFEVKDKI |
| JGI25129J35166_10608132 | 3300002484 | Marine | MSFITQMLSDDAKISSKRFIGFASFVMLVGSWTANTFFEFAISEQILQCFMYIT |
| JGI25128J35275_10712011 | 3300002488 | Marine | MNFLREMLSSDAKISSKRFVGFMAFFMLICSWGADTFSTFEVKDKILECFM |
| PicViral_10043751 | 3300003690 | Marine, Hydrothermal Vent Plume | MSFFTQMLSDDAKISSKRFIGFASFVMLVCSWGANTFGGFDIKDQILQCFMYIT |
| Ga0066620_12255051 | 3300004639 | Marine | MSFLTEMLSSDAKISSKRTVGFAAFFMLICCWGADTFSAFED |
| Ga0066849_100741861 | 3300005430 | Marine | MNFFREMLSSDAKISSKRFVGFMAFFMLICSWGADSFTTF |
| Ga0066854_100557101 | 3300005431 | Marine | MNFIKEMLSDDTKISSKRFIGFASFFMLVLSWCANTFGGFDIKDQIL |
| Ga0066864_101433291 | 3300005520 | Marine | MSFLLNMLSDDAKISSKRFIGFSSFVMLVASWIAN |
| Ga0066862_100605791 | 3300005521 | Marine | MNFLREMLSSDAKISSKRFVGFMAFFMLICSWGADTF |
| Ga0066835_103141381 | 3300005606 | Marine | MSFLREMLSSDAKVSSKRAVGFASFFMLICCWGADTFTA |
| Ga0066369_101030693 | 3300005969 | Marine | MSFLFNMLSDDAKISSKRFIGFSSFVMLVLSWGANTFFGFDIKDQILECFM |
| Ga0098038_10758413 | 3300006735 | Marine | MSFLREMLSSDAKVSSKRAVGFASFFMLICCWGADTFTAFEVKDKILECFMYI |
| Ga0098038_11599471 | 3300006735 | Marine | MNFLREMLSSDAKISSKRFVGFMAFFMLICSWGADTFSAFEV |
| Ga0098033_11637582 | 3300006736 | Marine | MSFITQMLSDDAKISSKRFIGFASFVMLVCSWGANTFGGFDIKDQILQCFMY |
| Ga0098035_11516472 | 3300006738 | Marine | MNFLKEMLSDDAKISSKRTVGFAAFFMLICSWGADTFTTFEVKEKILECFM |
| Ga0098040_10926993 | 3300006751 | Marine | MSFFREMLSSDAKISSKRFVGFMAFFMLICSWGADTF |
| Ga0098054_12710832 | 3300006789 | Marine | MGFIQEMLSSDAKISSKRTVGFAAFVMLIASWGAD |
| Ga0070750_102737412 | 3300006916 | Aqueous | MNFFREMLSSDAKISSKRFVGFMAFFMLICSWGADTFSAFEVKD |
| Ga0070746_102191991 | 3300006919 | Aqueous | MSFIKEMLSSDAKISSKRTVGFAAFFMLICSWGADTF |
| Ga0070748_12178311 | 3300006920 | Aqueous | MEFLKQMLSSDAKISSKRTVGFASFFMLICCWGADTFTAFEVKDKILECF |
| Ga0098060_10511053 | 3300006921 | Marine | MSFLTEMLSSDAKISSKRTVGFAAFFMLICSWGADTFSAFE |
| Ga0098050_11705541 | 3300006925 | Marine | MGFLQEMLSSEAKISSKRTVGFAAFMMLMASWGADTFSDFEVKDKILECFMY |
| Ga0098034_11987051 | 3300006927 | Marine | MSFITQMLSDDAKISSKRFIGFASFVMLVGSWVANTFFEFAISEQILQCFMYITVVG |
| Ga0070747_11980541 | 3300007276 | Aqueous | MSFLREMLSSDAKISSKRFVGFAAFFMLICSWGADTFSTFEVKDKILECF |
| Ga0098052_11429321 | 3300008050 | Marine | MGFLKEMLSSDAKISSKRTFGFAAFFMLICSWGADTFSAFEVKDKILECF |
| Ga0115566_100307321 | 3300009071 | Pelagic Marine | MSFLREMLSSDAKISSKRFVGFAAFFMLICSWGADTFSTFE |
| Ga0115565_105751702 | 3300009467 | Pelagic Marine | MGFLTQMLSSEAKISSKRTVGFAAFIMLMASWGADTFSGFE |
| Ga0115099_100613742 | 3300009543 | Marine | MQFIKEMLSSDAKISSKRFVGFASFFMLICCWGADTFTAFEVKDK |
| Ga0115011_106945141 | 3300009593 | Marine | MNFLREMLSSDAKISSKRFVGFMAFFMLMCSWGADTFS |
| Ga0114906_11238051 | 3300009605 | Deep Ocean | MSFITQMLSDDAKISSKRFIGFASFVMLVCSWGANTFGGFDIKDQILQCFM |
| Ga0115012_101684771 | 3300009790 | Marine | MNFLREMLSSDAKISSKRFVGFMAFFMLICSWGADTFS |
| Ga0115012_109423362 | 3300009790 | Marine | MSFLKEMLSSDAKISSKRTVGFAAFFMLICSWGADTFSAFEVKDKIL |
| Ga0115012_113071131 | 3300009790 | Marine | MSFLKEMLSSDAKISSKRTVGFAAFFMLICSWGADTFSAFEVKDKILEC |
| Ga0098049_10595871 | 3300010149 | Marine | MANFFREMLSSDAKISSKRFVGFAAFAMLILSWGADTFTAAEVKDKILDCFMYIS |
| Ga0098056_12149332 | 3300010150 | Marine | MANFFREMLSSDAKISSKRFVGFAAFTMLILSWGADT |
| Ga0098061_10100405 | 3300010151 | Marine | MSFLKEMLSSDAKISSKRTVGFAAFFMLICSWGADTFSAFEVKDKILECFMY |
| Ga0098061_10853513 | 3300010151 | Marine | MNFLREMLSSDAKISSKRFVGFMAFFMLICSWGADTFSTFEVKDKILE |
| Ga0098059_11744171 | 3300010153 | Marine | MSFIKEMLSSDAKISSKRTVGFAAFFMLICSWGADTFSAFEVKDKILECF |
| Ga0163179_115160731 | 3300012953 | Seawater | MNFIREMLSSDAKISSKRFIGFASFVMLIASWVANTFWQFEVK |
| Ga0180120_103060522 | 3300017697 | Freshwater To Marine Saline Gradient | MSFIREMLSSDAKISSKRFVGFASFFMLICCWGADTFT |
| Ga0181404_11606391 | 3300017717 | Seawater | MSFLREMLSSDAKISSKRFVGFASFFMLICCWGAD |
| Ga0181417_11065552 | 3300017730 | Seawater | MNFLREMLSSDAKISSKRFVGFMAFFMLMCSWGADTFSTFEVKDKILECFMY |
| Ga0181426_10830082 | 3300017733 | Seawater | MSVLREMLSSDAKISSKRFVGFMAFFMLICSWGADTFSAFEVKDKILECFM |
| Ga0187218_11120722 | 3300017737 | Seawater | MSFLTEMLSSDAKISSKRTVGFAAFFMLICSWGADTFSTFEVKDKILECFMYIS |
| Ga0181397_10122426 | 3300017744 | Seawater | MNFFMNMLSSEAKVSSKRFIGFMAFVMLMASWGAD |
| Ga0181427_10810431 | 3300017745 | Seawater | MSFLKEMLSSDAKISSKRTVGFAAFFMLICSWGADTFSTFEVKDKILECFMYISV |
| Ga0181405_11841812 | 3300017750 | Seawater | MGFIQEMLSSDAKISSKRVVGFAAFTMLIASWGADTFSAFEVKDKILEC |
| Ga0187219_11763201 | 3300017751 | Seawater | MGFLTDMLSSDAKISSKRTVGFAAFFMLICCWGADTFTVFEVKDKILECFMYISV |
| Ga0181411_11254521 | 3300017755 | Seawater | MSFFKEMLSSDAKISSKRFVGFMAFFMLICSWGADTFSAFEVKDKSP |
| Ga0187220_11124021 | 3300017768 | Seawater | MQFLREMLSSDAKISSKRFVGFASFFMLICCWGADTFTAFEVKDKILECFMY |
| Ga0181380_12125172 | 3300017782 | Seawater | MSFIKEMLSSDAKISSKRFVGFMAFFMLICSWGADTFSAFEP |
| Ga0181590_102891871 | 3300017967 | Salt Marsh | MQFFREMLSSDAKISSKRFVGFMAFAMLIASWGADTFSAFE |
| Ga0181553_103758622 | 3300018416 | Salt Marsh | MNFFREMLSSDAKISSKRFVGFMAFFMLICSWGADTFS |
| Ga0181591_102600181 | 3300018424 | Salt Marsh | MSFISEMLSSDAKISSKRVIGFAAFIMLIASWGADTFWAFE |
| Ga0206125_101872011 | 3300020165 | Seawater | MSFFKEMLSSDAKISSKRFVGFMAFFMLICSWGADTFSAFEVKDKILECFMYIS |
| Ga0206125_102288161 | 3300020165 | Seawater | MSFLREMLSSDAKISSKRFVGFAAFFMLICSWGAD |
| Ga0181570_101771443 | 3300020207 | Salt Marsh | MSFISEMLSSDAKISSKRVIGFAAFIMLIASWGADTFWAFEVKDKILDCF |
| Ga0211654_10484832 | 3300020247 | Marine | MSFLREMLSSDAKISSKRFVGFMAFFMLICSWGAD |
| Ga0211590_102158841 | 3300020387 | Marine | MNFIREMLSSDAKISSKRAIGFASFVMLVASWVANTFWQFEIKEM |
| Ga0211659_103584732 | 3300020404 | Marine | MNFFREMLSSDAKISSKRFVGFMAFFMLICSWGADTFSA |
| Ga0211651_100637731 | 3300020408 | Marine | MQFFREMLSSDAKISSKRFVGFMAFAMLIASWGADTFSTFEVKDKILECFM |
| Ga0211528_101545323 | 3300020417 | Marine | MSFISQMLSSDAKISSKRVIGFAAFIMLIASWGADTFWAFEVKDKIL |
| Ga0211528_104014412 | 3300020417 | Marine | MGFLHEMLSSDAKISSKRTVGFLSFFMLICSWGADTFSAFEVKDKILECFM |
| Ga0211653_100217641 | 3300020421 | Marine | MSFIREMLSSDAKISSKRFVGFASFFMLICCWGADTF |
| Ga0211653_104022421 | 3300020421 | Marine | MNFFREMLSSDAKISSKRFVGFMAFFMLICSSGAKV |
| Ga0211521_103051953 | 3300020428 | Marine | MSFIKEMLSSDAKISSKRTVGFAAFFMLICSWGADTFSAFE |
| Ga0211554_102697202 | 3300020431 | Marine | MSFIKEMLSSDAKISSKRTVGFAAFFMLICSWGADTFTAFE |
| Ga0211639_103607342 | 3300020435 | Marine | MSFLKEMLSDDAKLSSKRTVGFAAFFMLICSWGADTFTTFEVKEKILECFMYISV |
| Ga0211559_104980111 | 3300020442 | Marine | MSFISEMLSSDAKISSKRVIGFAAFIMLIASWGADTFWAFEVKDKILDC |
| Ga0211643_104348061 | 3300020457 | Marine | MQFLREMLSSDAKISSKRFVGFASFFMLICCWGADTFTAFEVKDK |
| Ga0211713_102897462 | 3300020467 | Marine | MSFLTEMLSSDAKISSKRTVGFAAFFMLICSWGADTFSTFEVKDKIL |
| Ga0211475_104577071 | 3300020468 | Marine | MSFLREMLSSDAKVSSKRFVGFAAFFMLICSWGADTFSAFEVKDKI |
| Ga0211543_100069208 | 3300020470 | Marine | MTTQYYNSNMNFFTEMLSSDAKISSKRFIGFASFVMLIASWVANTFWQF |
| Ga0211547_102449101 | 3300020474 | Marine | MSFLREMLSSDAKISSKRTVGFAAFFMLICSWGADTFSAFEVKDKILECFMYIS |
| Ga0211547_102633182 | 3300020474 | Marine | MEFLKQMLSSDAKISSKRTVGFASFFMLICCWGADTFTAFEVKDKILECFMYISV |
| Ga0206678_102079861 | 3300021084 | Seawater | MSFFTQMLSGDAKVSSKRFIGFASFVMLVASWGANTFGGFD |
| Ga0213858_102307241 | 3300021356 | Seawater | MSFLREMLSSDAKISSKRFVGFMAFFMLICSWGADTFSAFEV |
| Ga0213868_105476861 | 3300021389 | Seawater | MSFLREMLSSDAKISSKRFVGFMAFFMLICSWGADTFSAFEVKDKILECFMY |
| (restricted) Ga0233438_103907472 | 3300024255 | Seawater | MGFIQEMLSSDAKISSKRVVGFAAFTMLIASWGADTFSAF |
| Ga0244775_102968501 | 3300024346 | Estuarine | MSFLREMLSSDAKISSKRFVGFAAFFMLICSWGADTFSAFEVKD |
| Ga0208157_11020951 | 3300025086 | Marine | MSFLREMLSSDAKVSSKRAVGFASFFMLICCWGADTFTAFEVKDKI |
| Ga0208011_10599193 | 3300025096 | Marine | VNFLKEMLSDDAKISSKRTVGFAAFFMLICSWGAD |
| Ga0208669_10025991 | 3300025099 | Marine | MSFLREMLSSDAKISSKRFVGFAAFFMLICSWGADTFSTFEV |
| Ga0208669_10054571 | 3300025099 | Marine | MSFLREMLSSDAKISSKRFVGFAAFFMLICSWGADTFSTF |
| Ga0208669_10592151 | 3300025099 | Marine | MSFLREMLSSDAKVSSKRAVGFASFFMLICCWGADTFTAFEVKDKILECFM |
| Ga0208666_10520043 | 3300025102 | Marine | MSFLREMLSSDAKISSKRFVGFMAFFMLICSWGADTFSAFEVKD |
| Ga0209644_10382561 | 3300025125 | Marine | MSFLKEMLSSDAKISSKRTVGFAAFFMLICSWGADTFSAFEVKDKILE |
| Ga0209348_11347561 | 3300025127 | Marine | MSFLREMLSSDAKISSKRFVGFMAFFMLICSWGADTFS |
| Ga0209128_11944851 | 3300025131 | Marine | MSFLLNMLSDDAKISSKRFIGFSSFVMLVASWIANTF |
| Ga0209232_10803113 | 3300025132 | Marine | MEFLKQMLSSDAKISSKRFIGFASFVMLIASWVANTFFQYDIKDQI |
| Ga0209232_11932762 | 3300025132 | Marine | MSFLREMLSSDAKISSKRFVGFMAFFMLICSWGADTFSAFEVK |
| Ga0208299_11210361 | 3300025133 | Marine | MSFFTQMLSGDAKVSSKRFIGFASFVMLVASWGANTFGGFDIKDQIL |
| Ga0209336_100415841 | 3300025137 | Marine | MEFLKQMLSSDAKISSKRTVGFASFFMLICCWGADTFTAFEVKDKILECFM |
| Ga0209634_11986751 | 3300025138 | Marine | MGFLTEMLSSEAKISSKRTVGFAAFIMLMASWGADTFSGFEVKDKIL |
| Ga0209634_12356811 | 3300025138 | Marine | MGFLTEMLSSEAKISSKRTVGFAAFIMLMASWGADTFSGFEVKD |
| Ga0209645_11613341 | 3300025151 | Marine | MNFFREMLSSDAKISSKRFVGFMAFFMLICSWGADTF |
| Ga0209337_10150436 | 3300025168 | Marine | MGFLTEMLSSDAKISSKRTVGFAAFIMLMASWGADTFSGFEVKDKILECFM |
| Ga0209337_12501291 | 3300025168 | Marine | MGFLQEMLSSEAKISSKRTVGFAAFIMLMASWGADTFSGFEVKDKIL |
| Ga0208030_11078702 | 3300025282 | Deep Ocean | MSFITQMLSDDAKISSKRFIGFASFVMLVCSWGANTFGGFDIKDQILQCF |
| Ga0209657_11228971 | 3300025676 | Marine | MGFIQEMLSSDAKISSKRVVGFAAFTMLIASWGADTFSAFEVKDKILECFMYIS |
| Ga0208129_10226073 | 3300026193 | Marine | VNFLKEMLSDDAKISSKRTVGFAAFFMLICSWGADTFTSFEVKEKILECFMYISV |
| Ga0208129_10273694 | 3300026193 | Marine | MSFLLNMLSDDAKISSKRFIGFSSFIMLIASWIANTFFEFQVKD |
| Ga0208638_10394381 | 3300026199 | Marine | MSFITQMLSDEAKISSKRFIGFSSFVMLIASWIANTFFEFQVKDQIVECF |
| Ga0208639_11123443 | 3300026256 | Marine | MSFITQMLSDEAKISSKRFIGFSSFVMLIASWIANTFFEFQVKDQIVECFM |
| Ga0208407_11364232 | 3300026257 | Marine | MNFFREMLSSDAKISSKRFVGFMAFFMLICSWGADSFTT |
| Ga0208408_11658662 | 3300026260 | Marine | MGFLTEMLSSDAKISSKRTVGFAAFFMLICSWGADTFTAF |
| Ga0208133_10561851 | 3300027631 | Estuarine | MGFIQEMLSSDAKISSKRVVGFAAFTMLIASWGADTFSAFEVKDKILE |
| Ga0209709_103077182 | 3300027779 | Marine | MGFLKEMLSSDAKISSKRTVGFAAFFMLICSWGADTF |
| Ga0209404_103030723 | 3300027906 | Marine | MNFLREMLSSDAKISSKRFVGFMAFFMLMCSWGADTFSAFEVK |
| Ga0256368_10407443 | 3300028125 | Sea-Ice Brine | MGFLTDMLSSDAKISSKRTVGFAAFFMLICCWGADTFT |
| Ga0257117_11258792 | 3300028175 | Marine | MSFFKDMLSDKAKISSKRFVALSSFVMMIASWIATTFFKFEVSDILIENFMYIT |
| Ga0228615_10119091 | 3300028418 | Seawater | MQFIKEMLSSDAKISSKRFVGFASFFMLICCWGADTFTAFEVKDKILECFMY |
| Ga0183748_10468643 | 3300029319 | Marine | MQFFREMLSSDAKISSKRFVGFMAFAMLIASWGADTF |
| Ga0183748_10951092 | 3300029319 | Marine | MNFFREMLSSDAKISSKRFVGFMAFFMLICSWGADTFSAFEVK |
| Ga0183748_10997721 | 3300029319 | Marine | MSFLSQMLSDDAKISSKRFIGFASFTMLVGSWVANTFFKFAISETILENFM |
| Ga0183748_11090951 | 3300029319 | Marine | MSFLREMLSSDAKISSKRFVGFMAFFMLICSWGADTFSAFEVKDK |
| Ga0183755_10197271 | 3300029448 | Marine | MSFLREMLSSDAKISSKRTVGFAAFFMLICSWGADTFSAFEVKDKILECFMYISV |
| Ga0183755_11004522 | 3300029448 | Marine | MNFLKDMLSSDAKVSSKRFVGFASFFMLICCWGADTFTAFEVKDKILECFMYIS |
| Ga0308010_13412391 | 3300031510 | Marine | MGFLTEMLSSDAKISSKRTVGFAAFFMLICCWGADTFTAF |
| Ga0315318_108401632 | 3300031886 | Seawater | MSFLKEMLSSDAKISSKRTVGFAAFFMLICSWGADTFSAFEVKDKILECF |
| Ga0315316_114046911 | 3300032011 | Seawater | MSFLTEMLSSDAKISSKRTVGFAAFFMLICSWGADTFSAFEVKDKILECFMYISV |
| Ga0315327_107288722 | 3300032032 | Seawater | MNFFSQMLSGDAEGGVSSKRFIGFASFIMLVSSWVANTFF |
| Ga0315305_11702411 | 3300032127 | Marine | VNFLKEMLSDDAKISSKRTVGFAAFFMLICSWGADTF |
| Ga0316202_104324301 | 3300032277 | Microbial Mat | MSFLREMLSSDAKISSKRFVGFAAFFMLICSWGADTFSTFEVKDKILECFMY |
| Ga0310345_101287043 | 3300032278 | Seawater | MNFIKEMLSDDAKISSKRFIGFASFFMLVLSWGANTFFGFDIKEQ |
| Ga0310345_120929132 | 3300032278 | Seawater | MSFITQMLSDDAKISSKRFIGFASFVMLVGSWTANTFFEFAISEQILQCFMYITVVG |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |