Metagenome / Metatranscriptome Family F061592

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F061592
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	108 residues
Representative Sequence	MSAATIHDPNRDDLTPAGDEGADALKDQLRKDVASWREGRADGSSRQATELSVAVARSIVPPTTAKMKRAKPVAAETKTATAEKKPFGMSYDGTSRADYIKLMISRGAR
Number of Associated Samples	92
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.10 %
% of genes near scaffold ends (potentially truncated)	23.66 %
% of genes from short scaffolds (< 2000 bps)	93.89 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (19.084 % of family members)
Environment Ontology (ENVO)	Unclassified (29.771 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.779 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.04% β-sheet: 1.46% Coil/Unstructured: 63.50%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.24
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.24
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF01841	Transglut_core	3.82
PF01515	PTA_PTB	1.53
PF01987	AIM24	1.53
PF02515	CoA_transf_3	1.53
PF10649	DUF2478	0.76
PF02631	RecX	0.76
PF00920	ILVD_EDD	0.76
PF03372	Exo_endo_phos	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0129	Dihydroxyacid dehydratase/phosphogluconate dehydratase	Carbohydrate transport and metabolism [G]	1.53
COG0280	Phosphotransacetylase (includes Pta, EutD and phosphobutyryltransferase)	Energy production and conversion [C]	1.53
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	1.53
COG2013	AIM24 protein, required for mitochondrial respiration	Energy production and conversion [C]	1.53
COG2137	SOS response regulatory protein OraA/RecX, interacts with RecA	Posttranslational modification, protein turnover, chaperones [O]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	97.71 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	93.89 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.76 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	88.55 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.76 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	88.55 %
Sphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium	0.76 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	88.55 %
Sphingobium bisphenolivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → Sphingobium bisphenolivorans	0.76 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %
Unclassified	root	N/A	0.00 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000313\|WSSedB1CaDRAFT_10000792	All Organisms → cellular organisms → Bacteria → Proteobacteria	12904	Open in IMG/M
3300004080\|Ga0062385_10032669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2100	Open in IMG/M
3300004080\|Ga0062385_10800544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	617	Open in IMG/M
3300004092\|Ga0062389_101905093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	773	Open in IMG/M
3300004092\|Ga0062389_102301131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	711	Open in IMG/M
3300004121\|Ga0058882_1569775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	743	Open in IMG/M
3300004121\|Ga0058882_1767263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → Sphingobium bisphenolivorans	567	Open in IMG/M
3300004152\|Ga0062386_101844466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	504	Open in IMG/M
3300004473\|Ga0068919_1217692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	534	Open in IMG/M
3300004631\|Ga0058899_12237561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	718	Open in IMG/M
3300004635\|Ga0062388_100677074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	959	Open in IMG/M
3300004635\|Ga0062388_101861243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	619	Open in IMG/M
3300005366\|Ga0070659_101653406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	572	Open in IMG/M
3300005616\|Ga0068852_100162536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2086	Open in IMG/M
3300005650\|Ga0075038_11320809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1873	Open in IMG/M
3300006052\|Ga0075029_100138160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1490	Open in IMG/M
3300006893\|Ga0073928_10134249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2019	Open in IMG/M
3300006893\|Ga0073928_10226710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1444	Open in IMG/M
3300009510\|Ga0116230_10987464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	616	Open in IMG/M
3300009650\|Ga0105857_1023207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1649	Open in IMG/M
3300009651\|Ga0105859_1172421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	622	Open in IMG/M
3300010152\|Ga0126318_10676996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	679	Open in IMG/M
3300010854\|Ga0126360_1024248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	571	Open in IMG/M
3300010856\|Ga0126358_1192049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	860	Open in IMG/M
3300010856\|Ga0126358_1200326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	627	Open in IMG/M
3300010857\|Ga0126354_1020125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1027	Open in IMG/M
3300010857\|Ga0126354_1209461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	606	Open in IMG/M
3300010860\|Ga0126351_1043789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	573	Open in IMG/M
3300010862\|Ga0126348_1027756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1045	Open in IMG/M
3300010862\|Ga0126348_1236493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	632	Open in IMG/M
3300010864\|Ga0126357_1057963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1116	Open in IMG/M
3300010864\|Ga0126357_1131779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	639	Open in IMG/M
3300010864\|Ga0126357_1153597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	514	Open in IMG/M
3300010864\|Ga0126357_1310511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	559	Open in IMG/M
3300010865\|Ga0126346_1072515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	766	Open in IMG/M
3300010867\|Ga0126347_1190256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	501	Open in IMG/M
3300010869\|Ga0126359_1092692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	530	Open in IMG/M
3300010869\|Ga0126359_1311445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	719	Open in IMG/M
3300010869\|Ga0126359_1627783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	608	Open in IMG/M
3300010876\|Ga0126361_10459390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1055	Open in IMG/M
3300010876\|Ga0126361_10597719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	588	Open in IMG/M
3300010880\|Ga0126350_11460001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	516	Open in IMG/M
3300011120\|Ga0150983_10487729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1145	Open in IMG/M
3300011120\|Ga0150983_11438659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1146	Open in IMG/M
3300011120\|Ga0150983_12317139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	914	Open in IMG/M
3300011120\|Ga0150983_12650642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	515	Open in IMG/M
3300011120\|Ga0150983_12833282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	567	Open in IMG/M
3300011120\|Ga0150983_13593341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	792	Open in IMG/M
3300011120\|Ga0150983_16259139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	695	Open in IMG/M
3300012212\|Ga0150985_105623556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	766	Open in IMG/M
3300012212\|Ga0150985_116325296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	844	Open in IMG/M
3300012212\|Ga0150985_120678528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1482	Open in IMG/M
3300012411\|Ga0153880_1120524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	692	Open in IMG/M
3300013105\|Ga0157369_12162606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	564	Open in IMG/M
3300014499\|Ga0182012_10007158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	11205	Open in IMG/M
3300018035\|Ga0187875_10686149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	538	Open in IMG/M
3300019256\|Ga0181508_1201478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	730	Open in IMG/M
3300019256\|Ga0181508_1447998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	738	Open in IMG/M
3300019268\|Ga0181514_1063475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	658	Open in IMG/M
3300020069\|Ga0197907_10701397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	597	Open in IMG/M
3300020075\|Ga0206349_1000048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	588	Open in IMG/M
3300020076\|Ga0206355_1270681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	537	Open in IMG/M
3300020582\|Ga0210395_11063499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	598	Open in IMG/M
3300020728\|Ga0214202_1006495	All Organisms → cellular organisms → Bacteria → Proteobacteria	2428	Open in IMG/M
3300021151\|Ga0179584_1001914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1105	Open in IMG/M
3300021151\|Ga0179584_1020722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	670	Open in IMG/M
3300021151\|Ga0179584_1287470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	693	Open in IMG/M
3300021170\|Ga0210400_10916107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	715	Open in IMG/M
3300021180\|Ga0210396_11100849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	669	Open in IMG/M
3300021404\|Ga0210389_11232287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	575	Open in IMG/M
3300021474\|Ga0210390_11140526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	632	Open in IMG/M
3300021855\|Ga0213854_1122849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	697	Open in IMG/M
3300021860\|Ga0213851_1468853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	827	Open in IMG/M
3300021861\|Ga0213853_10713631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1241	Open in IMG/M
3300022506\|Ga0242648_1080805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	543	Open in IMG/M
3300022527\|Ga0242664_1145788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	519	Open in IMG/M
3300022528\|Ga0242669_1043496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	747	Open in IMG/M
3300022530\|Ga0242658_1032529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1018	Open in IMG/M
3300022530\|Ga0242658_1110749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	669	Open in IMG/M
3300022557\|Ga0212123_10529796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	758	Open in IMG/M
3300022715\|Ga0242678_1059357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	571	Open in IMG/M
3300022720\|Ga0242672_1024731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	865	Open in IMG/M
3300022720\|Ga0242672_1042041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	739	Open in IMG/M
3300022724\|Ga0242665_10123839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	792	Open in IMG/M
3300025574\|Ga0208717_1098736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	649	Open in IMG/M
3300025679\|Ga0207933_1037988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1810	Open in IMG/M
3300025932\|Ga0207690_11533387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	557	Open in IMG/M
3300027303\|Ga0208999_1025700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	853	Open in IMG/M
3300027817\|Ga0209112_10143122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	798	Open in IMG/M
3300029913\|Ga0311362_11156326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	582	Open in IMG/M
3300029914\|Ga0311359_10745562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	695	Open in IMG/M
3300029939\|Ga0311328_10156134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1818	Open in IMG/M
3300029945\|Ga0311330_10614009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	853	Open in IMG/M
3300029952\|Ga0311346_10241404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1945	Open in IMG/M
3300029999\|Ga0311339_11745337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	543	Open in IMG/M
3300030557\|Ga0257198_1157968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	517	Open in IMG/M
3300030566\|Ga0257186_1102464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	593	Open in IMG/M
3300030730\|Ga0307482_1023044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1316	Open in IMG/M
3300030730\|Ga0307482_1161847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	659	Open in IMG/M
3300030730\|Ga0307482_1287290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	526	Open in IMG/M
3300030774\|Ga0074007_10994413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	644	Open in IMG/M
3300030785\|Ga0102757_11329665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	507	Open in IMG/M
3300030839\|Ga0073999_10968249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	552	Open in IMG/M
3300030860\|Ga0074000_12741912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	624	Open in IMG/M
3300030863\|Ga0265766_1019510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	550	Open in IMG/M
3300030877\|Ga0265777_107337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	767	Open in IMG/M
3300030885\|Ga0265743_105499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	786	Open in IMG/M
3300030941\|Ga0265737_111322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	561	Open in IMG/M
3300030949\|Ga0074031_1543434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	736	Open in IMG/M
3300030959\|Ga0102747_10835940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	615	Open in IMG/M
3300030959\|Ga0102747_11093503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	700	Open in IMG/M
3300031009\|Ga0074022_1226029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	612	Open in IMG/M
3300031031\|Ga0074042_10586896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	579	Open in IMG/M
3300031058\|Ga0308189_10240194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	679	Open in IMG/M
3300031234\|Ga0302325_11038234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1114	Open in IMG/M
3300031236\|Ga0302324_101765987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	788	Open in IMG/M
3300031524\|Ga0302320_10011025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	19210	Open in IMG/M
3300031872\|Ga0316033_111685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	549	Open in IMG/M
3300032119\|Ga0316051_1032934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	514	Open in IMG/M
3300032515\|Ga0348332_12600936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	674	Open in IMG/M
3300032515\|Ga0348332_12966482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1162	Open in IMG/M
3300032515\|Ga0348332_13198524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	608	Open in IMG/M
3300032515\|Ga0348332_13428439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	672	Open in IMG/M
3300032515\|Ga0348332_13949615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1350	Open in IMG/M
3300032515\|Ga0348332_14090590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	652	Open in IMG/M
3300032515\|Ga0348332_14208446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	697	Open in IMG/M
3300032515\|Ga0348332_14682027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	753	Open in IMG/M
3300032515\|Ga0348332_14733470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	527	Open in IMG/M
3300032756\|Ga0315742_12394217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	600	Open in IMG/M
3300034268\|Ga0372943_0036567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2690	Open in IMG/M
3300034268\|Ga0372943_0416437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	868	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.37%
Host-Associated	Host-Associated	7.63%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.57%
Aquatic	Environmental → Aquatic	16.79%
Plants	Host-Associated → Plants	6.11%
Human	Host-Associated → Human	1.53%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.83%
Freshwater	Environmental → Aquatic → Freshwater	12.98%
Peat	Environmental → Terrestrial → Peat	6.87%
Plant Litter	Environmental → Terrestrial → Plant Litter	6.87%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.05%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.29%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.29%
Digestive System	Host-Associated → Human → Digestive System	1.53%
Marine	Environmental → Aquatic → Marine	0.76%
Sediment	Environmental → Aquatic → Sediment	0.76%
Peat Moss	Host-Associated → Plants → Peat Moss	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.62%
Loam	Environmental → Terrestrial → Soil → Loam	9.16%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.40%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.87%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	6.87%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.05%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.05%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.29%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	1.53%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.53%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.76%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.76%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.76%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.16%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.40%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.87%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	6.87%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.05%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.05%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.29%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.53%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	1.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.53%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.76%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.76%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.08%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	15.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.16%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	6.87%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.34%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	4.58%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.05%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	2.29%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.29%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.29%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.29%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	2.29%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.29%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.29%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.53%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	1.53%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.53%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.76%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.76%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.76%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.76%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.76%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.76%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	0.76%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000313	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site B1 Cattail	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004121	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004473	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005650	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_055 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009510	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300009650	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-061	Environmental	Open in IMG/M
3300009651	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-063	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010854	Boreal forest soil eukaryotic communities from Alaska, USA - W4-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010856	Boreal forest soil eukaryotic communities from Alaska, USA - W4-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010857	Boreal forest soil eukaryotic communities from Alaska, USA - W1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010860	Boreal forest soil eukaryotic communities from Alaska, USA - C5-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010862	Boreal forest soil eukaryotic communities from Alaska, USA - C4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010864	Boreal forest soil eukaryotic communities from Alaska, USA - W3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010865	Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010869	Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012411	Freshwater microbial communities from Lake Alinen Mustaj?rvi, Finland - AM7a metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300019256	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019268	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020076	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020728	Freshwater microbial communities from Trout Bog Lake, WI - 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300021151	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021855	Metatranscriptome of freshwater sediment microbial communities from pre-fracked creek in Pennsylvania, United States - G-2016_18 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022506	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022715	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022720	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025574	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 shallow (SPAdes)	Environmental	Open in IMG/M
3300025679	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027303	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030557	Metatranscriptome of decayed wood fungal communities from Pinus contorta in Tenderfoot Creek Experimental Forest, Montana, United States - TCEF2-2N (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300030566	Metatranscriptome of decayed wood fungal communities from Pinus contorta in Bitterroot National Forest, Montana, United States - GP2-1 (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030774	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Wood GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030785	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 5C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030839	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil TCEFB (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030860	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Litter GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030863	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030877	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030885	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030941	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLA4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030949	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Humus C3 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030959	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines Pi 2A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031009	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - LB 10 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031031	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Litter C2 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031872	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU2 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032119	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSE5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032756	Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined Assembly	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
WSSedB1CaDRAFT_1000079210	3300000313	Wetland	MSAATASDANPDGAQQDDADAMKDQLRKDVASWREGRADGASRGATELSVAVTRSIVPPTTAKMKRAKPAAAEAKPAASTEKKPFGMSYDGTSRADYIKLMISRGAR*
Ga0062385_100326693	3300004080	Bog Forest Soil	MSVGTIHDPNRDDSAPVGDDGADALKDQLRKDVASWREGRADGSSQQATELSVAVARSIVPPTSAKMKRARPVAAETKAATAEKKPFGMSYDGTSRADYIKLMISRGAR*
Ga0062385_108005441	3300004080	Bog Forest Soil	MKNQLQKDVASWREGRSEGSGHQATELSVAVTRSIVPPTTAKMKRAKPVPAETKPAGSGKKPFGMSYDGTSRAEYIKLMIARGAR*
Ga0062389_1019050932	3300004092	Bog Forest Soil	MSAAPIDDPNQDHPTQEGPDLDADAMKNQLQKDVASWREGRSEGSGHQATELSVAVTRSIVPPTTAKMKRAKPVPAETKPAGSGKKPFGMSYDGTSRAEYIKLMIARGAR*
Ga0062389_1023011311	3300004092	Bog Forest Soil	MSVGTIHDPNRDDSAPVGDDGADALKDQLRKDVASWREGRADGSSQQATELSVAVARSIVPPTSAKMKRAKPVAAETKAATAEKKPFGMSYDGTSRADYIKLMISRGAR*
Ga0058882_15697752	3300004121	Forest Soil	MSAGPIDDSNQDDPNLTQNLAEDDAADAMKDQLRKDVASWREGRADGSSRQATELSVAVARTIVPPTTAKMKRAKPAESKPVGTEKKPFGMSYDGTSRADYIKLMISRGAR*
Ga0058882_17672631	3300004121	Forest Soil	MNAATIRDPNQDDTSVSGDDRGTALKDQLQKDVASWREGRADGSSRQATELSVAVARSIVPPTSAKMKRAKPVAAETSPATAGKKPFGMSYDGTSRADYIKLMISRGAR*
Ga0062386_1018444661	3300004152	Bog Forest Soil	MSAAPTHNPNQDDSDLAAPDLAAPDLAADHAADAMKDRLRKDVASWREGRSDASSRQATDLSVAVTRSIVPPTTAKMKRAKPVTAEAKPAGTEKKPFGMSYDGTSRADYIKLMI
Ga0068919_12176921	3300004473	Peatlands Soil	MSVSPLHDRNQNERDLTDEGTDAMKDRLRRDVASWRDGRSDESSSRATSSSRATELSVAVARSIVPPTTAKMKRSKPAVQETTAPTGGKKPFGMSYDGTSRADYIKLMIARGAR*
Ga0058899_122375611	3300004631	Forest Soil	MSTAPADEPMQPGPTQGDDAADAMKDQLRKDVASWREGRADASTHGATELSVAVARSIVPPTTARMKRAAPAVTQAKPATTGKKPFGMSYDGTSRQDYIKLMISRGAR*
Ga0062388_1006770741	3300004635	Bog Forest Soil	MSVGTIHDPNRDDSAPVGDDGADALKDQLRKDVASWREGRADGSSQQATELSVAVARSIVPPTSAKMKRAKPVAAETKAATAEKKPFGMSYDGTSRAD
Ga0062388_1018612432	3300004635	Bog Forest Soil	AMKNQLQKDVASWREGRSEGSGHQATELSVAVTRSIVPPTTAKMKRAKPVPAETKPAGSGKKPFGMSYDGTSRAEYIKLMIARGAR*
Ga0070659_1016534061	3300005366	Corn Rhizosphere	PLDQTALLVSVTGSVLLKPTICERTFCMSAASAGDENIDGPRHEDADAMKDQLRKDVASWREGRGEASGRGATELSVAVARSTVPPTNAKMKRAKAPASEPKAPTTEKKPFGMSYDGTSRADYIKQMISRGAR*
Ga0068852_1001625361	3300005616	Corn Rhizosphere	MSAASAGDENIDGPRHEDADAMKDQLRKDVASWREGRGEASGRGATELSVAVARSTVPPTNAKMKRAKAPASEPKAPTTEKKPFGMSYDGTSRADYIKQMISRGAR*
Ga0075038_113208093	3300005650	Permafrost Soil	MSTGPADEPVQVDTSQANPVQADGEADAMKDQLRKDVASWREGRSDGSTRQATELSVAVTRSIVPPTTAKMKRAKPVATEIKSATTEKKPFGMSYDGTSRSDYIKLMISRGAR*
Ga0075029_1001381603	3300006052	Watersheds	MSTTPADEPAQVESVQADDSADALKQQLAKDVASWREGRADGSSRGATELSVAVTRSIVPPTTAKMKRAKPAAPEVKPASTEKKPFGMSYDGTSRADYIKLMISRGAR*
Ga0073928_101342494	3300006893	Iron-Sulfur Acid Spring	MSMTPDEPTENEHVQADDAADAMKDQLRKDVASWREGRSEGSSRGATELSVAVARSIVPPTTARMKRAKPAAPEVKSASTEKKPFGMSYDGTSRADYIKLMISRGAR*
Ga0073928_102267102	3300006893	Iron-Sulfur Acid Spring	MNTAPADEPMQAGHGQTEDAHANDAADAMKDQLRKDVASWREGRSEGSGRAATELSVAVARPIVPPTTARMRRAKPVAETKPSTTEKKPFGMSYDGTSRADYIKLMISRGAR*
Ga0116230_109874642	3300009510	Host-Associated	MSTVPDDEPTQVDHAADAMKDQLRKDVANWREGRSDASSRGATELSVAVARSIVPPTTARMKRAKPAAPEMKSASAEKKPFGMSYDGTSRADYIKLMISRGAR*
Ga0105857_10232073	3300009650	Permafrost Soil	MSTGPADEPIQVDTSQAGPVQGDGEADAMKDQLRKDVASWREGRSDGSTRQATELSVAVTRSIVPPTTAKMKRAKPVATEIKSATTEKKPFGMSYDGTSRSDYIKLMISRGAR*
Ga0105859_11724212	3300009651	Permafrost Soil	FFSIGCGLGHDPPTRRTRRMSTGPADEPVQVDTSQANPVQADGEADAMKDQLRKDVASWREGRSDGSTRQATELSVAVTRSIVPPTTAKMKRAKPVATEIKSATTEKKPFGMSYDGTSRSDYIKLMISRGAR*
Ga0126318_106769961	3300010152	Soil	MSAASAGDENIDGPRHEDADAMKDQLRKDVASWREGRGEASGRGATELSVAVARSTVPPTNAKMKRAKAPASEPKASTTEKKPFGMSYDGTSRADYIKQMISRGAR*
Ga0126360_10242481	3300010854	Boreal Forest Soil	MSAATIHDPNRDDSTPAADDGADALKDQLRKDVASWREGRADGSSRQETELSVAVARSIVPPTSAKMKRAKPVAAEAKAASAEKKPFGMSYDGTSRADYIKLMISRGAR*
Ga0126358_11920491	3300010856	Boreal Forest Soil	TINNPNRDDPTSAGDDGADALKDQLRKDVASWREGRADGSSRQATELSVAVARSIVPPTSAKMKRAKPVAAETKAATAEKKPFGMSYDGTSRADYIKLMISRGAR*
Ga0126358_12003262	3300010856	Boreal Forest Soil	MSTGPADESAEADTSQNDPVLADTREADTMKDQLRKDVASWREGRSDGSTRQATELSVAVTRSIVPPTTAKMKRPKPAAQEAKTATTEKKPFGMSYDGTSRSDYIKLMISRGAR*
Ga0126354_10201251	3300010857	Boreal Forest Soil	MSAAPVRDPNQDATDLTADDPGDAMKDQLRRDVASWRDGRSDASSRHATDLSVAVARSIVPPTTAKMQRAKRVVVETKVAGSEKKPFGMSYDGTSRADYIKLMISRGAR*
Ga0126354_12094612	3300010857	Boreal Forest Soil	MSTVPADESTQADTAQADAAQADAAPGNVEADAMKDQLRKDVASWREGRSDGSARHATELSVAVTRSIVPPTTAKMRRAKPAAPPEPKAATSEKKPFGMSYDGTSRADYIKLMISRGAR*
Ga0126351_10437891	3300010860	Boreal Forest Soil	PVEADATQADDAADAMKDQLRKDVASWREGRAEGSTRGATELSVAVARSIVPPTTARMKRAKPVTPEVTPASTTKKPFGMSYDGTSRSDYIKLMISRGAR*
Ga0126348_10277561	3300010862	Boreal Forest Soil	HAADAMKDRLRKDVASWREGRSDSSSRQATDLSVAVARSIVPPTTAKMKRAKPVTAEAKPAGTEKKPFGMSYDGTSRADYIKLMISRGAR*
Ga0126348_12364932	3300010862	Boreal Forest Soil	MSAATIHDPNRDFPTPAGDDGADALKDQLRKDVASWREGRADGSGREATELSVAVARSIVPPTSAKMKRAKPVAAETKAGTAEKKPFGMSYDGTSRADYIKLMISRGAR*
Ga0126357_10579634	3300010864	Boreal Forest Soil	MSTVPDDEPTQADHMQADDAADAMKDQLRKDVASWREGRSEGSSRGATELSVAVARSIVPPTTARMKRAKPAAAEAKPASTDKKPFGMSYDGTSRADYIKLMISRGAR*
Ga0126357_11317791	3300010864	Boreal Forest Soil	MSTAPADEPMQVDDEADAMKDQLRKDVASWREGRSDGSTRGATELSVAVTRSIVPPTTARMKRAKPATPEVKPTSTEKKPFGMSYDGTSRQDYIKLMISRGAR*
Ga0126357_11535971	3300010864	Boreal Forest Soil	MSAAPADEPNQVDPASDLDDAADSMKDQLRKDVASWREGRADGSDRGATELSVAVTRSIVPPTTARMKRAKPASTEAKPASGEKKPFGMSYDGTSRADYIKLMISRGAR*
Ga0126357_13105111	3300010864	Boreal Forest Soil	MSTVPADESTQADTAQADATPGNVEADAMKDQLRKDVASWREGRSDGSARHATELSVAVTRSIVPPTTAKMRRAKPAAPEPKAATSEKKPFGMSYDGTSRADYIKLMISRGAR*
Ga0126346_10725152	3300010865	Boreal Forest Soil	MSATPIHDPSIEDPSQDEPDAAADALKDQLRKDVASWREGRADGSARQATELSVSVTRSIVPPTTAKMKRAKPTPVDAGPASSEKKPFGMSYDGTSRADYIKLMISRGAR*
Ga0126347_11902561	3300010867	Boreal Forest Soil	MSAATIHDPNRDDSTPAADDGADALKDQLRKDVASWREGRADGSSRQATELSVAVARSIVPPTSAKMKRAKPVAAEEKAASAEKKPFGMSYDGTSRADYIKLMISRGAR*
Ga0126359_10926921	3300010869	Boreal Forest Soil	MQPDPAQADDAADAMKDQLRKDVASWREGRADGSTRGATELSVAVARSIVPPTTARMKRAKPVTSEIKPASTEKKPFGMSYDGTSRQDYIKLMISRGAR*
Ga0126359_13114452	3300010869	Boreal Forest Soil	TSPTDNLPKGKTMSAATINNPNRDDPTAVGDDGADALKDQLRKDVASWREGRADGSSRQATELSVAVARSIVPPTSAKMKRAKPVAAETKAATAEKKPFGMSYDGTSRADYIKLMISRGAR*
Ga0126359_16277831	3300010869	Boreal Forest Soil	MSTAPADEPMQADPMQADPTQVDDEADAMKDQLRKDVASWREGRSDGSARGATELSVAVTRSIVPPTTARMKRAKPATPEVKPTSTEKKPFGMSYDGTSRQDYIKLMISRGAR*
Ga0126361_104593902	3300010876	Boreal Forest Soil	MSTAPANEPDQADTGWQADPVQQASAAQDDNAADAMKDQLRKDVASWREGRSEGSARGATELSVAVTRSIVPPTTARMKRTKPVASEVKSSATEKKPFGMSYDGTSRSDYIKLMISRGAR
Ga0126361_105977191	3300010876	Boreal Forest Soil	MSTAPADKPTQADSVHVDEAADVQADALKDQLRTDAASWREGRSDGSTRQATELSVAVARAIVPPTTARMKRAKPPAAEAKPAATEKKPCGMSYDGTSRSDYIKLMISRGAR*
Ga0126350_114600012	3300010880	Boreal Forest Soil	MSAATINNPNRDDPTPAGDDGADALKDQLRKDVASWREGRADGSSQQATELSVAVARSIVPPTSAKMKRAKPVAAETKAATAEKKPFGMSYDGTSRADYIKLMISRGAR*
Ga0150983_104877291	3300011120	Forest Soil	MSAASIGDPNQDDPALSGDDGAGALKDQLQKDVASWREGRADGSSRQATELSVAVARSIVPPTSARMKRAKPVAAETKPATAGKKPFGMSYDGTSRADYIKLMISRGAR*
Ga0150983_114386591	3300011120	Forest Soil	MSAASIDDPNQDHPTQEGPDLDADAMKNQLQKDVASWREGRSEGSGHQATELSVAVTRSIVPPTTAKMKRARPVPAETKPTAAGKKPFGMSYDGTSRAEYIKLMIARGAR*
Ga0150983_123171393	3300011120	Forest Soil	MSVGTIHDPNRDDSTPVGDDGADALKDQLRKDVASWREGRADGSSRQATELSVAVARSIVPPTSAKMRRAKPIAAETKAATAEKKPFGMSYDGTSRADYIKLMISRGAR*
Ga0150983_126506421	3300011120	Forest Soil	MNAATIRDPNQDDTSVSGDDRGNALKDQLQKDVASWREGRADGSSRQATELSVAVARSIVPPTSAKMKRAKPVAAETSPATAGKKPFGMSYDGTSRADYIKLMISRGAR*
Ga0150983_128332822	3300011120	Forest Soil	MSAATIHDPNRDDLTPAGDEGADALKDQLRKDVASWREGRADGSSRQATELSVAVARSIVPPTTAKMKRAKPVAAETKTATAEKKPFGMSYDGTSRADYIKLMISRGAR*
Ga0150983_135933411	3300011120	Forest Soil	MQPGPTQGDDAADAMKDQLRKDVASWREGRADASTHGATELSVAVARSIVPPTTARMKRAAPAVTQAKPATTGKKPFGMSYDGTSRQDYIKLMISRGAR*
Ga0150983_162591391	3300011120	Forest Soil	MSVAPIDDPLNVDATQGEPELGADAMKDQLRKDVASWREGRTDGSARQATELSVAVARSLVPPTTAKMKRAKAAPADVKPETTEKKPFGMSYDGTSRADYIKLMIARGAR*
Ga0150985_1056235561	3300012212	Avena Fatua Rhizosphere	MSVSPRHDRNQNEHDPTDDGTDAMKDRLRQDVASWRGGRSDESSSRATELSVAVTRSIVPPTTAKMKRSKPAGEKATSSTTEKKPFGMSYDGTSRADYIKLMIARGAR*
Ga0150985_1163252961	3300012212	Avena Fatua Rhizosphere	MTAASDHDPNQDEPDLAADAMKDQLRKDVASWREGRADGSSRQATELSVAVARAIVPPTTAKMKRAKPAPVEAAQPGTEKKPFGMSYDGTSRSEYIKLMIARGAR*
Ga0150985_1206785281	3300012212	Avena Fatua Rhizosphere	MDDPNQDDHDVAADAMKDQLRKDVASWREGRSDGSGRQATDLSVAVTRSIVPPTIAKMKRAKPVATDVKPSTAEKKPFGMSYDGTSRADYIKLMISRGAR*
Ga0153880_11205241	3300012411	Freshwater Sediment	MSTVPDDGTHPAEFVQADETADAMKSQLAKDVASWREGRADGSTRGATELSVAVTRSIVPPTTAKMKRAKPVVVEAKPVSSEKKPFGMSYDGTSRADYIKLMISRGAR*
Ga0157369_121626061	3300013105	Corn Rhizosphere	RTFCMSAASAGDENIDGPRHEDADAMKDQLRKDVASWREGRGEASGRGATELSVAVARSTVPPTNAKMKRAKAPASEPKAPTTEKKPFGMSYDGTSRADYIKQMISRGAR*
Ga0182012_100071585	3300014499	Bog	MSTPSEDESANTDVAADAMKDQLRKDVASWREGRSEGSSRDATELSVAVARAIVPPTTARMKRAKPVVAEAKPVTSEKKPFGMSYDGTSRADYIKLMISRGAR*
Ga0187875_106861491	3300018035	Peatland	MSGATIRDPNQDDPDLTGDDGADALKDQLRKDVASWREGRADGSSRQATELSVAVARSIVPPTSARMKRAKPVAGDAKPATAGKKPCGMSYDGTSRADYIKLMISRGAR
Ga0181508_12014782	3300019256	Peatland	MSSGPDDEPTQADEAADAMKDQLRKDVASWREGRSEGSSRDATDLSVAVARSIVPPTTARMKRSKPVAPASKPATAEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0181508_14479981	3300019256	Peatland	MSSAPDNEPTQVDDAADAMKDQLQKDVASWREGRSDGSSRSATELSVAVARAIVPPTTAKMKRAKPAAPEIKPATSEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0181514_10634752	3300019268	Peatland	MSTAPDSDQADDAADAMKDQLRKDVASWREGRSEASSRDATDLSVAVARSIVPPTTARMKRAKPVAPAAKPATAEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0197907_107013972	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MSAASAGDENIDGPRHEDADAMKDQLRKDVASWREGRGEASGRGATELSVAVARSTVPPTNAKMKRAKAPASEPKASTTEKKPFGMSYDGTSRADYIKQMISRGAR
Ga0206349_10000481	3300020075	Corn, Switchgrass And Miscanthus Rhizosphere	MSVSPRHDRNQNEHDPTDDGTDAMKDRLRQDVASWRGGRSDESSSRATELSVAVTRSIVPPTTAKMKRSKPAGEKATSSTTEKKPFGMSYDGTSRADYIKLMIARGAR
Ga0206355_12706811	3300020076	Corn, Switchgrass And Miscanthus Rhizosphere	MSAASAGDENIDGPRHEDADAMKDQLRKDVASWREGRGEASGRGATELSVAVARSTVPPTNAKMKRAKAPASEPKAPTTEKKPFGMSYDGTSRADYIKQMISRGAR
Ga0210395_110634992	3300020582	Soil	MSVGTIHDPNRDDSTPVGDDGADALKDQLRKDVASWREGRADGSSRQATELSVAVARSIVPPTSAKMKRAKPIAAETKAATAEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0214202_10064953	3300020728	Freshwater	MSTVPDDGTHPAEFVQADETADAMKSQLAKDVASWREGRADGSTRGATELSVAVTRSIVPPTTAKMKRAKPVVVEAKPVSSEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0179584_10019143	3300021151	Vadose Zone Soil	MSMTPDEPTENEHVQADDAADAMKDQLRKDVASWREGRSEGSSRGATELSVAVARSIVPPTTARMKRAKPAAPEVKSASTEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0179584_10207222	3300021151	Vadose Zone Soil	MGTGSAADSTAAMQAKADQTPADREPGRGDSTAMQDQLRKDVASWREGRSDAPARHATELSVAVTRSIVPPTNAKMKHARPVAPEAKAATTGKKPFGMSYDGTSRADYIKLMISRGAR
Ga0179584_12874702	3300021151	Vadose Zone Soil	MSTAPDDEPTQTDLAADAMKDQLQKDVASWREGRSDGSSRGATELSVAVARSIVPPTNARMKRAKPTTPESKTTTTEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0210400_109161071	3300021170	Soil	MSTAPEDEPMEAARSEADAAEADHAADAIKDQLQKDVASWREGRSEGASRQATELSVAVTRSIVPPTTARMKRAKPVTSEAKPAPGGKKPFGMSYDGTSRSDYIKLMIARGAR
Ga0210396_111008492	3300021180	Soil	MNAATIRDPNQDDTSVSGDDRGNALKDQLQKDVASWREGRADGSSRQATELSVAVARSIVPPTSAKMKRAKPVAAETSPATAGKKPFGMSYDGTSRADYIKLMISRGAR
Ga0210389_112322871	3300021404	Soil	MSTAPADEPTQALRSEADSAEADHAADAIKDQLQKDVASWREGRSEGSSRQATELSVAVARSIVPPTTARMKRAKPVTSEAKPAPGGKKPFGMSYDGTSRSDYIKLMIARGAR
Ga0210390_111405262	3300021474	Soil	MSAASIDDPNQDHPTQEGPDLDADAMKNQLQKDVASWREGRSEGSGHQATELSVAVTRSIVPPTTAKMKRARPVPAETKPTAAGKKPFGMSYDGTSRAEYIKLMIARGAR
Ga0213854_11228491	3300021855	Watersheds	MSVGTIHDPNRDDSTPVGDDGADALKDQLRKDVASWREGRADGSSRQATELSVAVARSIVPPTSAKMKRAKPIAAETKAAAAEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0213851_14688532	3300021860	Watersheds	MSVGTIHDPNRDDSTPVGDDDADALKDQLRKDVASWREGRADGSSRQATELSVAVARSIVPPTSAKMKRAKPIAAETKAATAEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0213853_107136312	3300021861	Watersheds	MSALPNRDPSDDDFKPSEHKAADALKDQLRRDVASWREGRADGSSRQATELSVAVARTIVPPTTAKMKRATSAAAPVKAATAEKKPFGMSYDGTSRADYIKQMISRGAR
Ga0242648_10808051	3300022506	Soil	MSTAPEDEPMEAARSEADAAEADHAADSIKDQLQKDVASWREGRSEGASRQATELSVAVARSIVPPTTARMKRAKPVTQEAKPAPGGKKPFGMSYDGTSRSDYIKLMIARGAR
Ga0242664_11457881	3300022527	Soil	MNAATIRDPNQDDTSVSGDDRGNALKDQLQKDVASWREGRADGSSRQATELSVAVARSIVPPTSAKMKRAKPVAAETPPATAGKKPFGMSYDGTSRADYIKLMISRGAR
Ga0242669_10434961	3300022528	Soil	MNAATIRDPNQDDTSVSGDDRGNALKDQLQKDVASWREGRADGSSRQATELSVAVARSIVPPTSAKIKRAKPVAAETPPATAGKKPFGMSYDGTSRADYIKLMISRGAR
Ga0242658_10325293	3300022530	Soil	MSTAPADEPTQALRSEADSAEADHTADAIKDQLQKDVASWREGRSEGSSRQATELSVAVTRSIVPPTTARMKRAKPVTSEAKPAPGGKKPFGMSYDGTSRSDYIKLMIARGAR
Ga0242658_11107492	3300022530	Soil	MSVGTIHDPNRDDSTPVGDDGADALKDQLRKDVASWREGRADGSSRQATELSVAVARSIVPPTSAKMKRAKPIVAETKAATAEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0212123_105297961	3300022557	Iron-Sulfur Acid Spring	MNTAPADEPMQAGHGQTEDAHANDAADAMKDQLRKDVASWREGRSEGSGRAATELSVAVARPIVPPTTARMRRAKPVAETKPSTTEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0242678_10593571	3300022715	Soil	STYATTYQKEKSMSVGAIHDPNRDDSTPVGDDGADALKDQLRKDVASWREGRADGSSRQATDLSVAVARSTVPPTSAKMKRAKPVAAETKAATAEKKPFGMSYDGTSRADYIKLMISRGA
Ga0242672_10247313	3300022720	Soil	ALKDQLRKDVASWREGRADGSSRQATDLSVAVARSIVPPTSAKMKRAKPVAAETKAATAEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0242672_10420412	3300022720	Soil	MSAATIDDPDRDDPTPAGDDGADALKDQLRKDVASWREGRADGSSRQATELSVAVARPIVPPTTAKMKRAKPVAAETKTATTEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0242665_101238391	3300022724	Soil	AADAIKDQLQKDVASWREGRSEGASRQATELSVAVARSIVPPTTARMKRAKPVTQEAKPAPGGKKPFGMSYDGTSRSDYIKLMIARGAR
Ga0208717_10987362	3300025574	Arctic Peat Soil	MSTAPVNEPMQADDDANAMKDQLRKDVATWREGRADGREGRSDGAARGATELSVAVARSIVPPTTARMKRAKPAAPEAKPATTEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0207933_10379884	3300025679	Arctic Peat Soil	MNTAPADDPIQPDATQMDDAADAARMDDAAAMKDKMAKDVASWREGRSDSGARGATELSVAVTRSIVPPTTARMKRAAPKPPEVKPASTEKKPFGMSYDGTSRQDYIKLMISRGAR
Ga0207690_115333872	3300025932	Corn Rhizosphere	MKDQLRKDVASWREGRGEASGRGATELSVAVARSTVPPTNAKMKRAKAPASEPKASTTEKKPFGMSYDGTSRADYIKQMISRGAR
Ga0208999_10257001	3300027303	Forest Soil	MSAASADEPNQIDPTPTADDVDDSMKDQLRRDVASWREGRADSSSRDATGLSVAVTRSIVPPTNARMKRAKPASAEIKPASSAEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0209112_101431222	3300027817	Forest Soil	MSVAPGNDPHQDDQPQQSDDSAADNMKHQLQKDVTSWREGRAEGSSRQATELSVAVTRAIVPPTTAKMRRAKPAATEAKSTTAEKKPFGMSYDGTSRAEYIKLMIARGAR
Ga0311362_111563262	3300029913	Bog	RSRVVNLAQSLTRGNICMNTAPDDEPVQADDAADAMKDQLRKDVASWREGRSDGPSRGATDLSVAVARSIVPPTTARMKRARPAAAEVKPATAEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0311359_107455623	3300029914	Bog	ICMSTPSEDESANTDVAADAMKDQLRKDVASWREGRSEGSSRDATELSVAVARAIVPPTTARMKRAKPVVAEAKPVTSEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0311328_101561344	3300029939	Bog	MSTAPDDEPVQADDAADAMKDQLRKDVASWREGRSDGPSRGATDLSVAVARSIVPPTTARMKRARPAAAEVKPATAEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0311330_106140092	3300029945	Bog	MSTATDDPTQEDPAQADAPHVDVEADAMKDQLRKDVASWREGRSDGSTRGATELSVAVARSIVPPTTARMKRAKPVPAEAKPVSTEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0311346_102414043	3300029952	Bog	MSTAPDDEPVQADDAADAMKDQLRKDVASWREGRSDGPSRSATDLSVAVARSIVPPTTARMKRARPAAAEVKPATAEKKPFGMSYDGTSRADYIKLMIS
Ga0311339_117453371	3300029999	Palsa	MRTVPADEPSQTDSTQTDSMQADDAAGAMKDQLQKDVASWREGRSEGSSRQATELSVAVARSIVPPTTARMKRAKPAGPEVKAAPAEKKPFGMSYDGTSRSDYIKL
Ga0257198_11579681	3300030557	Host-Associated	PRHHRHRLQVASQFDPRTKRKTCMSTAPDDEPAQVDTEADAMKDQLRKDVASWREGRSDGSSRGATELSVAVTRSIVPPTTARMKRAKPAATDVKSTTTEKKPFGMSYDGTSRADYIKLMISRGALE
Ga0257186_11024641	3300030566	Host-Associated	MSTAPDDEPTQVDLEADAMKDQLRKDVASWREGRSDGASRGATELSVAVARSIVPPPTARMKRAKPAVPEVKSASTEKKPFGMSYDGTSRADYIKLMIARGAR
Ga0307482_10230444	3300030730	Hardwood Forest Soil	MSTAPEDEPMEAARSEADAAEADHAADAIKDHLQKDVASWREGRSEGASRQATELSVAVARSIVPPTTARMKRAKPVTQEAKPAPGGKKPFGMSYDGTSRSDYIKLMIARGAR
Ga0307482_11618471	3300030730	Hardwood Forest Soil	DHAADAIKDQLQKDVASWREGRSEGSSRQATELSVAVARSIVPPTTARMKRAKPVTSEAKPAPGGKKPFGMSYDGTSRSDYIKLMIARGAR
Ga0307482_12872901	3300030730	Hardwood Forest Soil	HDPNRDDPTPAGNDGDDALKDQLRKDVASWREGRADGSSRQATELSVAVARSIVPPTSAKMKRAKPVVAETKAGTAEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0074007_109944131	3300030774	Soil	MTAASDEEPTQDDVTSDAMKDQLRKDVASWREGRSDGSTRQATELSVSVARSIVPPTTAKMKRAKPAAVEAKPANSEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0102757_113296651	3300030785	Soil	PAEADEAADAMKDQLRKDVASWREGRSDGSTRQATELSVAVTRSIVPPTDAKLRRAKPVAEAKPAVGEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0073999_109682491	3300030839	Soil	NVEADAMKDQLRKDVASWREGRSDGSARHATELSVAVTRSIVPPTTAKMRRSKPAAAPEPKAATSEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0074000_127419121	3300030860	Soil	MSTAPDDEPAQVDTEADAMKDQLRKDVASWREGRSDGSSRGATELSVAVTRSVVPPTTARMKRAKPAATEVKSTTTEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0265766_10195101	3300030863	Soil	GKTMSAATIHDPNRDDSTPGGGDGANALKDQLRKDVASWREGRADGSSREATELSVAVARSIVPPTSAKMKRAKPVAAETKPATPEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0265777_1073372	3300030877	Soil	MSAASVHDPDRDDPTPAGDDGADALKDQLRKDVASWREGRADGSSRQATDLSVAVARSIVPPTTAKMKRAKPAAPETKAGTTEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0265743_1054991	3300030885	Soil	MSVGTIHDPSRDDSTPVGDDGADALKDQLRKDVASWREGRADGSSRQATELSVAVARSIVPPTSAKMKRAKPIAAETKAATAEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0265737_1113221	3300030941	Soil	MSTAPADEPMQVDDEADAMKDQLRKDVASWREGRSDGSARGATELSVAVTRSIVPPTTARMKRAKPATPEIKPTSTEKKPFGMSYDGTSRQDYIKLMISRGAR
Ga0074031_15434343	3300030949	Soil	APDDEPTQADEDAAAMKDQLQKDVASWREGRTDGSSRGATELSVAVARSIVPPTTARMKRAKPATTEVKLTSTEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0102747_108359402	3300030959	Soil	MSIDPADAPADADASQADSRVAEDQLRKDIASWREGRSDGSAKDATELSVAVTRSIVPPTNAKMKRAKPAVPEVKPATTEKKPFGMSYDGTSRAEYIKLMISRGAR
Ga0102747_110935031	3300030959	Soil	MSAAPIHDPNQHDADNEAPDLSADAMKDQLQKDVASWREGRSDGSNRQATELSVAVARSIVPPTTAKMKRARSAPAEAKPATTDKKPFGMSYDGTSRADYIKLMISRGAR
Ga0074022_12260292	3300031009	Soil	MSTAPADEPTQADEEADAMKDQLRKDVASWREGRSDGSSRGATELSVAVTRSIVPPTTARMKRAKPSTPDVKPVSTEKKPFGMSYDGTSRQDYIKLMISRGAR
Ga0074042_105868961	3300031031	Soil	RPEVFRHLPWAAADATSHSEGKSMSAVSDQDPNQDEPDLAADALKDQLRKDVASWREGRADGSSRQATELSVAVTRVIEPPTTAKMKRAKPTPVDATQAATGKKPFGMSYDGTSRAEYIKLMIARGAR
Ga0308189_102401942	3300031058	Soil	MSADQPTDAGQMHRELAQEAGQPDAEADALKDQLRKDVASWREGRADGADRQSTELSVAVTRSIVPPTNARMKRAKPVAPVAKAESDQKKPFGMSYDGTSRADYIKLMIARGAR
Ga0302325_110382343	3300031234	Palsa	MRTVPADEPSQTDSTQTDSMQADDAAGAMKDQLQKDVASWREGRSEGSSRQATELSVAVARSIVPPTTARMKRAKPAAPEVKAAPAEKKPFGMSYEGTSRSDYIKLMISRGAR
Ga0302324_1017659871	3300031236	Palsa	SGISSKGTPMSTAPDDEPTQADEDAAAMKDQLQKDVASWREGRTDGSSRGATELSVAVARSIVPPTTARMKRAKPATTEVKLTSTEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0302320_100110258	3300031524	Bog	MSTPSEDESANTDVAADAMKDQLRKDVASWREGRSEGSSRDATELSVAVARAIVPPTTARMKRAKPVVAEAKPVTSEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0316033_1116851	3300031872	Soil	MSTEPVDEPTQADDEADAMKDQLRKDVASWREGRSDGSTRGATELSVAVTRSIVPPTTARMKRAKPVTPDVKPASTEKKPFGMSYDGTSRQDYIKLMISRGAR
Ga0316051_10329342	3300032119	Soil	DAASAMKDQLRKDVASWREGRSDGSTRQATELSVAVARAIVPPTTARMKRAKPAASEVKPASAEKKPFGMSYDGTSRSDYIKLMISRGAR
Ga0348332_126009361	3300032515	Plant Litter	VSEDDGGDALKDQLQKDVASWREGRADGSSRQATELSVAVARSIVPPTSAKMKRAKPVAAEPTPATAGKKPFGMSYDGTSRADYIKLMISRGAR
Ga0348332_129664822	3300032515	Plant Litter	MSTAPAEDPAQVDATDVDEAAAAMKDKMAKDVASWREGRSDGASRGATELSVAVTRSIVPPTTARMKRAKPAAVEAKPVSTEKKPFGMSYDGTSRQDYIKLMIARGAR
Ga0348332_131985242	3300032515	Plant Litter	MSAAATHDPDRDDLTPAGDDGADALKDQLRKDVASWREGRADGSSRQATELSVAVARPIVPPTTAKMKRAKPVAAETKTGAAEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0348332_134284391	3300032515	Plant Litter	MTAAPIHEPTLDAAEQAVVDRDTADRDTAKQDAVKHDAAELEAPDLAADALKDQLRKDVASWREGRSDGSNRQATELSVAVTRSIVPPTTAKMKRAKPVTAEPQPTPTEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0348332_139496153	3300032515	Plant Litter	MSVGTIDDPNRDDSTPVGDDGADALKDQLRKDIASWREGRADGSSRQATDLSVAVARSIVPPTSAKMKRAKPIAAETKAAAAEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0348332_140905901	3300032515	Plant Litter	MNAETIRDPNQDDTSVSEDDGGDALKDQLQKDVASWREGRADGSSRQATELSVAVARSIVPPTSARMKRSKPIVAETKPATAGKKPFGMSYDGTSRADYIKLMISRGAR
Ga0348332_142084462	3300032515	Plant Litter	MSAAPDDEPTQVDTTADAMKDQLQKDIASWREGRSEGSSRGATELSVAVARSIVPPTTARMKRVKPVAPEVKPTIAEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0348332_146820271	3300032515	Plant Litter	MSTAPDDEPTQPDEAADAMKDQLQKDVASWREGRSEGSSRDATELSVAVTRSIVPPTTARMKRAKPVAPVAKPATTEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0348332_147334701	3300032515	Plant Litter	MSTAPADEPTQADPTGADPTGADPDHADVVADAMKDQLRKDVASWREGRSEGSTRRATELSVAVARSIVPPTTARMKRVKPVSADAKPLGTEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0315742_123942172	3300032756	Forest Soil	MSTAPDDEPTQADEDAAAMKDQLQKDVASWREGRTDGSSRGATELSVAVARSIVPPTTARMKRAKPATTEVKLTSTEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0372943_0036567_607_909	3300034268	Soil	MDDPNQDDHDVAADAMKDQLRKDVASWREGRSDGSGRQATDLSVAVTRSIVPPTIAKMKRAKPVATDAKPSTAEKKPFGMSYDGTSRADYIKLMISRGAR
Ga0372943_0416437_505_837	3300034268	Soil	MSAASADEPNQIDPTPTADEADDSMKDQLRRDVASWREGRADSSSRDATGLSVAVARSIVPPTTARMKRAKPASNEAKPASAADKKPFGMSYDGTSRADYIKQMISRGAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061592

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences