NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F061627

Metagenome / Metatranscriptome Family F061627

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F061627
Family Type Metagenome / Metatranscriptome
Number of Sequences 131
Average Sequence Length 53 residues
Representative Sequence MSPIDPRLQEALDGERDPGELPVDLREAYARLISATQLLTATPQLSVAARV
Number of Associated Samples 111
Number of Associated Scaffolds 131

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 99.24 %
% of genes from short scaffolds (< 2000 bps) 85.50 %
Associated GOLD sequencing projects 103
AlphaFold2 3D model prediction Yes
3D model pTM-score0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (99.237 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(27.481 % of family members)
Environment Ontology (ENVO) Unclassified
(48.092 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(51.908 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 41.77%    β-sheet: 0.00%    Coil/Unstructured: 58.23%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.62
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 131 Family Scaffolds
PF08281Sigma70_r4_2 90.84
PF03190Thioredox_DsbH 3.05
PF07221GlcNAc_2-epim 2.29
PF01532Glyco_hydro_47 1.53
PF00903Glyoxalase 1.53
PF00171Aldedh 0.76

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 131 Family Scaffolds
COG1331Uncharacterized conserved protein YyaL, SSP411 family, contains thoiredoxin and six-hairpin glycosidase-like domainsGeneral function prediction only [R] 3.05
COG2942Mannose or cellobiose epimerase, N-acyl-D-glucosamine 2-epimerase familyCarbohydrate transport and metabolism [G] 2.29
COG0014Gamma-glutamyl phosphate reductaseAmino acid transport and metabolism [E] 0.76
COG1012Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenaseLipid transport and metabolism [I] 0.76
COG4230Delta 1-pyrroline-5-carboxylate dehydrogenaseAmino acid transport and metabolism [E] 0.76

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.24 %
UnclassifiedrootN/A0.76 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001686|C688J18823_10818614All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300002560|JGI25383J37093_10068287All Organisms → cellular organisms → Bacteria1110Open in IMG/M
3300002562|JGI25382J37095_10062018All Organisms → cellular organisms → Bacteria1413Open in IMG/M
3300002568|C688J35102_119399086All Organisms → cellular organisms → Bacteria687Open in IMG/M
3300004778|Ga0062383_10735685All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300005172|Ga0066683_10036703All Organisms → cellular organisms → Bacteria2849Open in IMG/M
3300005180|Ga0066685_10713993All Organisms → cellular organisms → Bacteria687Open in IMG/M
3300005181|Ga0066678_10175602All Organisms → cellular organisms → Bacteria1355Open in IMG/M
3300005445|Ga0070708_100600362All Organisms → cellular organisms → Bacteria1038Open in IMG/M
3300005447|Ga0066689_10044416All Organisms → cellular organisms → Bacteria2353Open in IMG/M
3300005447|Ga0066689_11026984All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300005450|Ga0066682_10760648All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300005454|Ga0066687_10297307All Organisms → cellular organisms → Bacteria914Open in IMG/M
3300005468|Ga0070707_100016559All Organisms → cellular organisms → Bacteria6919Open in IMG/M
3300005518|Ga0070699_101327982All Organisms → cellular organisms → Bacteria660Open in IMG/M
3300005536|Ga0070697_101922949All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300005545|Ga0070695_100812478All Organisms → cellular organisms → Bacteria750Open in IMG/M
3300005549|Ga0070704_100081700All Organisms → cellular organisms → Bacteria2381Open in IMG/M
3300005553|Ga0066695_10137619All Organisms → cellular organisms → Bacteria1515Open in IMG/M
3300005558|Ga0066698_10496756All Organisms → cellular organisms → Bacteria829Open in IMG/M
3300005576|Ga0066708_10726581All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300005586|Ga0066691_10039571All Organisms → cellular organisms → Bacteria2481Open in IMG/M
3300006031|Ga0066651_10534580All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300006031|Ga0066651_10700470All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300006034|Ga0066656_10023757All Organisms → cellular organisms → Bacteria3322Open in IMG/M
3300006845|Ga0075421_100474940All Organisms → cellular organisms → Bacteria1490Open in IMG/M
3300006852|Ga0075433_10511510All Organisms → cellular organisms → Bacteria1057Open in IMG/M
3300006904|Ga0075424_101365241All Organisms → cellular organisms → Bacteria753Open in IMG/M
3300006914|Ga0075436_100161781All Organisms → cellular organisms → Bacteria1578Open in IMG/M
3300007076|Ga0075435_101234694All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300009012|Ga0066710_102570422All Organisms → cellular organisms → Bacteria733Open in IMG/M
3300009089|Ga0099828_11881826All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300009090|Ga0099827_10161874All Organisms → cellular organisms → Bacteria1838Open in IMG/M
3300009090|Ga0099827_10571906All Organisms → cellular organisms → Bacteria973Open in IMG/M
3300009090|Ga0099827_11069953All Organisms → cellular organisms → Bacteria700Open in IMG/M
3300009090|Ga0099827_11249662All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300009143|Ga0099792_11218424All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300009147|Ga0114129_10833882All Organisms → cellular organisms → Bacteria1173Open in IMG/M
3300010047|Ga0126382_12287656All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300010086|Ga0127496_1108060All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300010093|Ga0127490_1019654All Organisms → cellular organisms → Bacteria709Open in IMG/M
3300010097|Ga0127501_1103744All Organisms → cellular organisms → Bacteria761Open in IMG/M
3300010107|Ga0127494_1063630All Organisms → cellular organisms → Bacteria705Open in IMG/M
3300010107|Ga0127494_1104526All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300010111|Ga0127491_1038613All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300010115|Ga0127495_1111710All Organisms → cellular organisms → Bacteria824Open in IMG/M
3300010126|Ga0127482_1054173All Organisms → cellular organisms → Bacteria686Open in IMG/M
3300010130|Ga0127493_1101656All Organisms → cellular organisms → Bacteria965Open in IMG/M
3300010132|Ga0127455_1019501All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300010142|Ga0127483_1226114All Organisms → cellular organisms → Bacteria786Open in IMG/M
3300010329|Ga0134111_10076887All Organisms → cellular organisms → Bacteria1253Open in IMG/M
3300010336|Ga0134071_10326386All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300010364|Ga0134066_10406612All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300010401|Ga0134121_11834930All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300012189|Ga0137388_10013344All Organisms → cellular organisms → Bacteria5913Open in IMG/M
3300012198|Ga0137364_11400714All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300012203|Ga0137399_10185995All Organisms → cellular organisms → Bacteria1679Open in IMG/M
3300012204|Ga0137374_10741609All Organisms → cellular organisms → Bacteria733Open in IMG/M
3300012207|Ga0137381_10348949All Organisms → cellular organisms → Bacteria1290Open in IMG/M
3300012208|Ga0137376_10105656All Organisms → cellular organisms → Bacteria2389Open in IMG/M
3300012208|Ga0137376_11092304All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300012208|Ga0137376_11290067All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300012208|Ga0137376_11552085All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300012210|Ga0137378_11058948All Organisms → cellular organisms → Bacteria725Open in IMG/M
3300012354|Ga0137366_11215252All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes512Open in IMG/M
3300012356|Ga0137371_10349169All Organisms → cellular organisms → Bacteria1150Open in IMG/M
3300012392|Ga0134043_1196158All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300012398|Ga0134051_1247511All Organisms → cellular organisms → Bacteria703Open in IMG/M
3300012399|Ga0134061_1283188All Organisms → cellular organisms → Bacteria664Open in IMG/M
3300012401|Ga0134055_1300898All Organisms → cellular organisms → Bacteria743Open in IMG/M
3300012402|Ga0134059_1044275All Organisms → cellular organisms → Bacteria810Open in IMG/M
3300012403|Ga0134049_1329500All Organisms → cellular organisms → Bacteria657Open in IMG/M
3300012404|Ga0134024_1132426All Organisms → cellular organisms → Bacteria743Open in IMG/M
3300012410|Ga0134060_1172027All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300012923|Ga0137359_10222122All Organisms → cellular organisms → Bacteria1687Open in IMG/M
3300012923|Ga0137359_11677687All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300012927|Ga0137416_11725870All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300012929|Ga0137404_11416222All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300012930|Ga0137407_10155025All Organisms → cellular organisms → Bacteria2027Open in IMG/M
3300012930|Ga0137407_10269411All Organisms → cellular organisms → Bacteria1549Open in IMG/M
3300012972|Ga0134077_10167601All Organisms → cellular organisms → Bacteria883Open in IMG/M
3300014154|Ga0134075_10130517All Organisms → cellular organisms → Bacteria1070Open in IMG/M
3300014154|Ga0134075_10310216All Organisms → cellular organisms → Bacteria688Open in IMG/M
3300014154|Ga0134075_10477718All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300014157|Ga0134078_10032374All Organisms → cellular organisms → Bacteria1725Open in IMG/M
3300015052|Ga0137411_1261086All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300015264|Ga0137403_10986989All Organisms → cellular organisms → Bacteria689Open in IMG/M
3300015359|Ga0134085_10013010All Organisms → cellular organisms → Bacteria3099Open in IMG/M
3300015359|Ga0134085_10543784All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300017654|Ga0134069_1007683All Organisms → cellular organisms → Bacteria3064Open in IMG/M
3300017656|Ga0134112_10306013All Organisms → cellular organisms → Bacteria640Open in IMG/M
3300017656|Ga0134112_10348298All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300018028|Ga0184608_10050659All Organisms → cellular organisms → Bacteria1634Open in IMG/M
3300018071|Ga0184618_10255530All Organisms → cellular organisms → Bacteria742Open in IMG/M
3300018078|Ga0184612_10079423All Organisms → cellular organisms → Bacteria1712Open in IMG/M
3300018084|Ga0184629_10721194All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300019255|Ga0184643_1465214All Organisms → cellular organisms → Bacteria679Open in IMG/M
3300020004|Ga0193755_1004354All Organisms → cellular organisms → Bacteria4521Open in IMG/M
3300020010|Ga0193749_1001887All Organisms → cellular organisms → Bacteria3929Open in IMG/M
3300021086|Ga0179596_10278575All Organisms → cellular organisms → Bacteria831Open in IMG/M
3300021151|Ga0179584_1423167All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300021307|Ga0179585_1120696All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300021307|Ga0179585_1174283All Organisms → cellular organisms → Bacteria631Open in IMG/M
3300022756|Ga0222622_10243718All Organisms → cellular organisms → Bacteria1214Open in IMG/M
3300024330|Ga0137417_1429226All Organisms → cellular organisms → Bacteria1016Open in IMG/M
3300025922|Ga0207646_10602249All Organisms → cellular organisms → Bacteria986Open in IMG/M
3300026285|Ga0209438_1020176All Organisms → cellular organisms → Bacteria2228Open in IMG/M
3300026297|Ga0209237_1134706All Organisms → cellular organisms → Bacteria1003Open in IMG/M
3300026301|Ga0209238_1054401All Organisms → cellular organisms → Bacteria1431Open in IMG/M
3300026317|Ga0209154_1123794All Organisms → cellular organisms → Bacteria1092Open in IMG/M
3300026324|Ga0209470_1183254All Organisms → cellular organisms → Bacteria902Open in IMG/M
3300026324|Ga0209470_1355696All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300026325|Ga0209152_10125106All Organisms → cellular organisms → Bacteria979Open in IMG/M
3300026332|Ga0209803_1028236All Organisms → cellular organisms → Bacteria2687Open in IMG/M
3300026523|Ga0209808_1060813All Organisms → cellular organisms → Bacteria1683Open in IMG/M
3300026537|Ga0209157_1039383All Organisms → cellular organisms → Bacteria2627Open in IMG/M
3300026540|Ga0209376_1272302All Organisms → cellular organisms → Bacteria704Open in IMG/M
3300026540|Ga0209376_1366401All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300027655|Ga0209388_1198352All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300027671|Ga0209588_1281839All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300027787|Ga0209074_10051005All Organisms → cellular organisms → Bacteria1265Open in IMG/M
3300027875|Ga0209283_10013718All Organisms → cellular organisms → Bacteria4844Open in IMG/M
3300028536|Ga0137415_11093220All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300028719|Ga0307301_10034461All Organisms → cellular organisms → Bacteria1528Open in IMG/M
3300028784|Ga0307282_10177417All Organisms → cellular organisms → Bacteria1015Open in IMG/M
3300031226|Ga0307497_10007269All Organisms → cellular organisms → Bacteria3028Open in IMG/M
3300031720|Ga0307469_11421408All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300031820|Ga0307473_10079831All Organisms → cellular organisms → Bacteria1673Open in IMG/M
3300031820|Ga0307473_10498437All Organisms → cellular organisms → Bacteria821Open in IMG/M
3300032205|Ga0307472_101352843All Organisms → cellular organisms → Bacteria688Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil27.48%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil24.43%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil17.56%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.34%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.58%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.58%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.82%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.05%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.05%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.53%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.76%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment0.76%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.76%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.76%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.76%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.76%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300002560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cmEnvironmentalOpen in IMG/M
3300002562Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004778Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3FreshEnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010086Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010093Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010097Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010107Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010111Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010115Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010126Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010130Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010132Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010142Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012392Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012398Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012399Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012401Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012402Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012403Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012404Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012410Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300015052Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300017654Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018084Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1EnvironmentalOpen in IMG/M
3300019255Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300020010Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2EnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021151Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021307Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_06_16RNAfungal (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026297Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300026523Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)EnvironmentalOpen in IMG/M
3300026537Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027671Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028719Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
C688J18823_1081861423300001686SoilMNPIDPRLQEALDGERDPGELSADQREAYHRLMNAGALLATTPVGSVADRVMAEVRANPLQVQH
JGI25383J37093_1006828733300002560Grasslands SoilMSPIDPRLQEALDGERDAGELPADLREACARLISAAELLQTTPRLS
JGI25382J37095_1006201833300002562Grasslands SoilMSPIDPRLQEALDGERDPGELPADLGEAYARLISAAQLLAATPPASVAARVMAEIRQTPLPVPVQPE
C688J35102_11939908623300002568SoilMNPIDPRLQEALDGERDPGELSADQREAYHRLMNAGALLATTPVGSVADRVMAEVR
Ga0062383_1073568523300004778Wetland SedimentMTPIDPQLQQALDGERDPATLPAGLREAYAQLMAAAELLR
Ga0066683_1003670343300005172SoilMSPLDPRLQEALDGERDPGDLPLDLRDAYTRLTVATQLLEAPPPVSVASR
Ga0066685_1071399323300005180SoilMIDPRLHEALDGERDPAELPADLRESYARLHGAAQLLEAVPPLSVATRVMAEIREIALEA
Ga0066678_1017560233300005181SoilMSPIDPRLQEALDAERDPGDLPVDLREAYALLAAATQVLKVMPPVSVASRVMAEIRQ
Ga0070708_10060036213300005445Corn, Switchgrass And Miscanthus RhizosphereMSPLDPRLQEALDGERDPGDLPLDLREAYTRLSVATQMLKATPPVSVA
Ga0066689_1004441633300005447SoilMSPIDPRLQEALDAERDPGDLPVDLREAYALLAAATQVLKVMPPVSVASRV
Ga0066689_1102698413300005447SoilMSPIDPRLQEALDGERDPGELPVDLGEAYARLISAAQLLAATPAASVAVRVMAEIRQ
Ga0066682_1076064823300005450SoilMSPIDPRLQEALDGERDPGELPADLREAYARLISATQVLSATPRLSVAARVMAEIRQ
Ga0066687_1029730733300005454SoilMSPIDPRLQEALDGERDPGDLPADLREAHARLIAATQMLKA
Ga0070707_10001655913300005468Corn, Switchgrass And Miscanthus RhizosphereMNPIDPRLQEALDGERDPGELPADLREVYVRLMSATEALATTPKLSVSHRVM
Ga0070699_10132798213300005518Corn, Switchgrass And Miscanthus RhizosphereMTVIDPRLQEALDGERDPTTLPAELREDYVRLTAATAMLREPPLTATS
Ga0070697_10192294923300005536Corn, Switchgrass And Miscanthus RhizosphereMSPIDPRLHEALDAERDPGELPTDLREAYARLMSAAELLQTTPRLSVATRIMTEIRQLPAPVHWDGPMRRLVRWF
Ga0070695_10081247823300005545Corn, Switchgrass And Miscanthus RhizosphereMTVIDPRVQEALDGERDPATLPPELREDYARLTGAAALLSAAPATS
Ga0070704_10008170013300005549Corn, Switchgrass And Miscanthus RhizosphereMSPLDPRLQEALDGERDPGDLPLDLREAYTRLSVATQMLKATPPVSVASRVMTEIRQGPPPVLNGG
Ga0066695_1013761913300005553SoilMSPIDQRLQEALDGERDPGDLPTDLRESYALLSAAAQMLKAMPPVSVASRVMAEIRQNPAPV
Ga0066698_1049675633300005558SoilMIDPRLHEALDGERDPAELPADLRESYARLHAAAQLLEAV
Ga0066708_1072658123300005576SoilMMAMSPIDPQLQDVLDGERDPATLSPDQREAYARLITAAESLQ
Ga0066691_1003957133300005586SoilMSPIDPRLQEALDAERDPGHLPVDLREAYALLAAATQVLKVMPPVSVASRVMAEIR
Ga0066651_1053458023300006031SoilMNPIDPRLQAALDGERDPAELPADLREAYALLISAAELLEATPPPR
Ga0066651_1070047013300006031SoilMMAMSPIDPRLQEALDGERDPGTLPADLREAYARLMGAANLLQTIPATSVAARVMAEIHDLKPEVEN
Ga0066656_1002375753300006034SoilMSPIDPRLQEALDAERDPGDLPMDLREAYALLAAATQVLKVMPPVSVASRVMAEIRQ
Ga0075421_10047494033300006845Populus RhizosphereMTDLDPRLQEALDGERDAATLPPELRDSFARLTAAARL
Ga0075433_1051151013300006852Populus RhizosphereMNPIDPRLQEALDGERDPGELPADLREVYARLMSATEALTTTPKLSVSHRVM
Ga0075424_10136524113300006904Populus RhizosphereMTQIDPRLQEALDGERDPATLPAGLREAFARLSEAAQLLRDPPAVS
Ga0075436_10016178113300006914Populus RhizosphereMTQIDPRLQEALDGERDPATLPAGLREAFARLSEAAQLLRDPPAVSVAER
Ga0075435_10123469413300007076Populus RhizosphereVSPIDPRLQEALDGERDPGELPPDLREAYGRLLSATKLLATTPQLSVAARVMAEVRQSPVHVPNP
Ga0066710_10257042223300009012Grasslands SoilMMLDAGGGMSPIDPRLQEALDNERDPGDLPADQQDAYARLMTAATLLSAKPALSVADRVM
Ga0099828_1188182613300009089Vadose Zone SoilMSPIDPRLQEALDAERDPGELPTDLREAYARLMSAAELLQTTPRLSVATRIMTEIRQLPAPV
Ga0099827_1016187413300009090Vadose Zone SoilMSPIDPRLQEALDGERDPGELPVDLREAYARLISATQLLTATPQL
Ga0099827_1057190613300009090Vadose Zone SoilMSPIDLRLQEALDGERDPGELPTDLREAYVWLMSAAELLQTTPR
Ga0099827_1106995313300009090Vadose Zone SoilMTQQIDPRLQEALDGERDPATLPAGLREAYARFAAAAELLQDPPAVSVAERVMTEIR
Ga0099827_1124966213300009090Vadose Zone SoilMSPIDPRLQEALDGERDPGDLPVDLREAYALLAAATQVLKAM
Ga0099792_1121842423300009143Vadose Zone SoilMSPIDQRLQEALDGERDPGGLPADLGEAYTRLISAAQLLA
Ga0114129_1083388233300009147Populus RhizosphereMTGNDPRLQEALDGERDPATLPEGLREAYARLTAAADLLREPP
Ga0126382_1228765613300010047Tropical Forest SoilMSPIDPRLQEALDGERDPGELPADLREAYSRLTSAAQLLSGTPKLSVDVRRLYAS
Ga0127496_110806023300010086Grasslands SoilMSPIDPRLQEALDAERDPGDLPVDLREAYARLNAATQILKATPPVSVASRV
Ga0127490_101965423300010093Grasslands SoilMSPIDQRLQEALDGERDPGDLPTDLRESYALLSAAAQMLKAMPPVSVASRVMAEIRQNP
Ga0127501_110374413300010097Grasslands SoilMSPIDPRLQEALDGERDPGDLPVDLREAYARLNAATQILKATPPVSVASRVMAEIRQNPARIESDGPARRLIR
Ga0127494_106363013300010107Grasslands SoilMNPIDPRLQEALDGERDPGELPADLREAYARLMMATEALATTPKLSVAHRVMEEIRRIPTPTPVPGQA
Ga0127494_110452613300010107Grasslands SoilMSPIDPRLQEALDGERDPGDLPVDLREAYARLNAATQ
Ga0127491_103861313300010111Grasslands SoilMIDPRLHEALDGERDPAELPADLRESYARLHAAAQLLEAVAPLSVATRVMAEIREIALEA
Ga0127495_111171013300010115Grasslands SoilMSPIDPRLQEALDLERDPGDLPVDLREAYARFNAATQMLKATPPVSV
Ga0127482_105417313300010126Grasslands SoilMIDPRLHEALDGERDPAELPADLRESYARLHAAAQLLEAVAPLSVATRVMAEI
Ga0127493_110165613300010130Grasslands SoilMSPIDPRLQEALDGERDPGDLPVDLREAYALLAAATQVLKVMPPVSVASRVMAEIRENPARVESDGPARRLIRW
Ga0127455_101950113300010132Grasslands SoilMSPIDPRLQEALDGERDPGELPADLREAYDRLTGAAQLLAGTPRLSVAPRVMAQIR
Ga0127483_122611423300010142Grasslands SoilMNPIDPRLQEALDGERDPAELPADLREAYARLIAAAELLETTPRLSVADRVTAEIRRMPVHMLPHGRVRRVI
Ga0134111_1007688733300010329Grasslands SoilMNPIDPRLQAALDGERDPAELPADLREAYALLISAAELLEATPPPRLSVANRVMA
Ga0134071_1032638633300010336Grasslands SoilMSPIDPRLQEALDGERDPGELPADLREVYARLISAAELDR
Ga0134066_1040661213300010364Grasslands SoilMSPIDPRLQEALDGERDPGELPADLREAYDRLTGAAQLLAGTPRLS
Ga0134121_1183493023300010401Terrestrial SoilMSPIDPRLQEALDGERDPGDLPLDLREAYTRLSVATQMLKAPPPVSVASRVMAEIRLG
Ga0137388_1001334413300012189Vadose Zone SoilMSPIDPRLQEALDGERDPGDLPVDLREAYALLAAATQVLKAMSPVSVAS
Ga0137364_1140071423300012198Vadose Zone SoilMNPIDPRLQEALDGERDPGELPADLREAYARLISATQALSATPRLSVAARVMAEIRQNPAPAPAQPGGPLRRSI
Ga0137399_1018599533300012203Vadose Zone SoilMTTIDPRVQEALDGERDPTTLPAELREAYARLTAAAALLR
Ga0137374_1074160923300012204Vadose Zone SoilMTAIDPRVQEALDGERDPATLPAELREAYARLTAAAALLR
Ga0137381_1034894933300012207Vadose Zone SoilMSPIDPRLQEALDGGRDPGDLPVDLREAYARLNAATQILKAPPPVSVASRVMAEIRQIPAPVQ
Ga0137376_1010565633300012208Vadose Zone SoilMSPIDPRLQEALDNERDPGDLPVDLWEAYARLNAATQILKATPPVSVASRVLAEIRQNPAAVQGEGPGRRLIHWL
Ga0137376_1109230413300012208Vadose Zone SoilMSPIDPRLQEALDGERDPGELPTDLRESYALLSAAAQMLKAMPPVSVASRVMAEIRQNPA
Ga0137376_1129006713300012208Vadose Zone SoilMSPIDQRLQEALDGERDPGDLPTDLRESYALLSAAAQMLK
Ga0137376_1155208523300012208Vadose Zone SoilMSPIDQRLQEALDGERDPGDLPTDLRESYALLSAA
Ga0137378_1105894833300012210Vadose Zone SoilMSPIDPRLQEALDGERDPGELPADLREAYARLISVTEVLSATPRLSVAARVMAEIRQNPAPAPAP
Ga0137366_1121525223300012354Vadose Zone SoilMSPIDPRLQEALDGERDPGELPVDLREAYARLISATQLLTATPQLSVAARV
Ga0137371_1034916913300012356Vadose Zone SoilMNPIDPRLQEALDGERDPAELPADLREAYARLIAAAELLETTPRLSVADRVTAEIR
Ga0134043_119615823300012392Grasslands SoilMSPIDPRLQEALDNERDPCDLPADQQDAYARLMTA
Ga0134051_124751123300012398Grasslands SoilMIDPRLHEALDGERDPAELPADLRESYARLHGAAQLLEAVPPLSVATRVMAEIR
Ga0134061_128318823300012399Grasslands SoilMSPIDPRLQEALDGERDPGELPADLREAYDRLTGAAQLLT
Ga0134055_130089833300012401Grasslands SoilMSPLDPRLQEALDGERDPGDLPLDLREAYTRLTVATQLLEAPPPVSVASCVMAEIRRGPPPVLNEGLARRLL
Ga0134059_104427513300012402Grasslands SoilMSPIDPRLQEALDLERDPGDLPVDLREAYARLNAATQILKATPPVSVASRVMAEIRQNPARIE
Ga0134049_132950013300012403Grasslands SoilMSPIDPRLQEALDGERDPGELPTDLRESYALLSAAAQMLKA
Ga0134024_113242613300012404Grasslands SoilMNPIDPRLQAALDGERDPAELPADLREAYALLISAAELLEATPPPRVSVANRVMTEIRQIPVHVPPHGS
Ga0134060_117202713300012410Grasslands SoilMSPIDPRLHEALDGERDPGDLPVDLREAYARLNAATQI
Ga0137359_1022212213300012923Vadose Zone SoilMSPIDPRLQEALDGERDPGDLTLDLREAYTRLTVATQMLKATPLLSVATRVMAEIRLGPPLVLHE
Ga0137359_1167768723300012923Vadose Zone SoilMSPIDQRLQEALDGERDPGDLHTDLRESYALLSAAAQVLKAMPPVSVASRVMAEIRENPAPVHGEGSAR
Ga0137416_1172587013300012927Vadose Zone SoilMSPLDPRLQEALDGERDPGDLPADLRDAYARLNAVTHVLKATPPVSVASRVMAEIRENPAPVRSGGPA
Ga0137404_1141622213300012929Vadose Zone SoilMTVIDPRLQEALDGERDPATLPVGLREAYARLVAAAE
Ga0137407_1015502513300012930Vadose Zone SoilMSPIDQRLQEALDGERDPGDLPTDLRESYALLSAAAQMLKTMPSVS
Ga0137407_1026941133300012930Vadose Zone SoilMSPLDPRLQEALDGERDPGDLPLDLREAYTRLSVATQMLKATPPMSVASRVMTEIRQG
Ga0137407_1048416733300012930Vadose Zone SoilMTDIDPRLQEALDGERDPATLPVGLREAYVRLVAATELLREPPAVSVADRVMA
Ga0134077_1016760133300012972Grasslands SoilMMLDAGGGMSPIDPRLQEALDNERDPGDLPADQQDAYARLMTAATLL
Ga0134075_1013051733300014154Grasslands SoilMSPIDPRLQEALDGERDPGELPADLREAYARLMMATEALATTP
Ga0134075_1031021613300014154Grasslands SoilMSPLDPRLQEALDGERDPGDLPLDLRDAYTRLTVATQLLEAPP
Ga0134075_1047771823300014154Grasslands SoilMSPIDPRLQEALDGERDPGDLPVDLREAYARLNAATQILK
Ga0134078_1003237433300014157Grasslands SoilMSPIDPRLQEALDGERDPGTLPADLREAYDRLTGAA
Ga0137411_126108623300015052Vadose Zone SoilMSPIDQRLQEALDGERDPGDLPTDLRESYALLSAAAQTLKTMSSVSVASRVMA
Ga0137403_1098698913300015264Vadose Zone SoilMSPLDPRLQEALDGERDPGDLPLDLREAYTRLSVATQMLKATPPVSVASRVM
Ga0134085_1001301063300015359Grasslands SoilMIDPRLHEALDGERDPAELPADLRESYARLHAAAQLLEAVAPLSVA
Ga0134085_1054378413300015359Grasslands SoilMSPIDPRLQEALDGERDPGELPADLREAYARLISATQVLSATPR
Ga0134069_100768363300017654Grasslands SoilMSPIDQRLQEALDGERDPGDLPTDLRESYALLSAAAQMLKAMPPVSVASRVMAEIRQNPAPVQ
Ga0134112_1030601323300017656Grasslands SoilMMLDAGGGMSPIDPRLQEALDNERDPGDLPADQQDAYARLMTAATLLSAKPAVSVADRVMAEIRAMPQ
Ga0134112_1034829823300017656Grasslands SoilMMAMSPIDPRLQEALDGERDPGTLPMDLREAYARLVGAANLLQTLPAVSVAARVMAEIHDLKPEVP
Ga0184608_1005065913300018028Groundwater SedimentMSPIDQRLQEALDGERDPGELPVDLRESYALLSAAAQMLKAMPPVSVASRVM
Ga0184618_1025553013300018071Groundwater SedimentMSPIDQRLQEALDGERDPGDLPTDLRESYALLSAAAQMLKAMPPVSVASRVMAEIRQNPAPA
Ga0184612_1007942313300018078Groundwater SedimentMTVNDPRLQEALDGERDPATLPDGLREAYARLTTAADLLREPPAVSVADRVM
Ga0184629_1072119423300018084Groundwater SedimentMSPNDPRLQEALDGERDPADLPADLRESYARLISAAQLLTVTPPVSV
Ga0184643_146521423300019255Groundwater SedimentMTLIDSRLQETLDGERDPATLPAELRDAYARLVSAA
Ga0193755_100435463300020004SoilMSPIDQRLQEALDGERDPGELPMDLRESYALLSAAAQMLKAMPPVSVASRVMTEIRQNP
Ga0193749_100188713300020010SoilMTQQIDPRLQEALDGERDPATLPAGLREAYARFAAAAELLQDPPAVS
Ga0179596_1027857513300021086Vadose Zone SoilMSPIDPRLQEALDGERDPGELSADLGEAYARLIAATQLLSATPRLSVAARVMAEIRQNPAPA
Ga0179584_142316713300021151Vadose Zone SoilMSPIDPRLQEALDNERDPGDLPVDLWEAYARLNAATQ
Ga0179585_112069613300021307Vadose Zone SoilMIDPRLHEALDGERDPAELPADLRESYARLTGAVQLLEGTPPVSVATRVMA
Ga0179585_117428313300021307Vadose Zone SoilMSPIDPRLQEALDGERDPGDLPVDLREAYVRLISAAEMLT
Ga0222622_1024371833300022756Groundwater SedimentMTVIDPRLQEALDGERDPAALPAELREAYARLTAAAALLR
Ga0137417_142922633300024330Vadose Zone SoilMSPIDLRLHEALDGERGPGELPADLGEAYARLISAAQLLAATPPASVAARVMAAIRQPPVPVQTEGPMRRLVR
Ga0207646_1060224933300025922Corn, Switchgrass And Miscanthus RhizosphereMTVIDPRLQEALDGERDPATLPVGLREAYARLVAAAELLREP
Ga0209438_102017633300026285Grasslands SoilMTVIDPRLQEALDGERDPATLPDGLRDAYARLMAAAGLLQ
Ga0209237_113470633300026297Grasslands SoilMNPIDPRLQEALDGERDPAELPADLREAYARLIAAAELLETTPRLSVADRVTAEIRRMP
Ga0209238_105440113300026301Grasslands SoilMSPIDPRLQEALDAERDPGHLPVDLREAYALLAAATQVLKVMPPVSVASRVM
Ga0209154_112379413300026317SoilMSPIDPRLQEALDGERDPGDLPADLREAHARLIAATQMLKATPPVSV
Ga0209470_118325433300026324SoilMSPIDPRLQEALDAERDPGDLPVDLREAYALLAAATQVLKVMPPVSVA
Ga0209470_135569613300026324SoilMNPIDPRLQEALDGERDPAELPADLREAYARLIAAAELLETTPRLSVADRVTAEIRQMPVHMLPDDRVRR
Ga0209152_1012510633300026325SoilMSPIDPRLQEALDSERDPGDLPVDLWEAYSRLDAATQILKGTPPVSVAS
Ga0209803_102823633300026332SoilMSPIDPRLQEALDAERDPGDLPVDLREAYALLAAATQVLKVMPPVSVASRVMAE
Ga0209808_106081313300026523SoilMSPIDPRLQEALDGERDPGDLPADLREAHARLIAATQML
Ga0209157_103938313300026537SoilMSPIDPRLQEALDAERDPGDLPVDLREAYALLAAATQVLKVMPPVSV
Ga0209376_127230213300026540SoilMSPIDPRLQEALDGERDPGELPMDQREAYDRLIAATQVLTAAPQLSVA
Ga0209376_136640113300026540SoilMSPIDPRLQEALDLERDPGDLPVDLREAYARFNAATQMLKATPPVSVAARVMAEIRQIPPPVH
Ga0209388_119835223300027655Vadose Zone SoilMTPIDPRLQEALDGERDPGELPADLREAYDRLTAAALLLTNTPRLSVAARVMAQIRALPAPAEARAP
Ga0209588_128183923300027671Vadose Zone SoilMSPIDPRLQEALDGERGPGELPADLGEAYARLISAAQLLAATPPASVAARVMAEVRQPPPPVP
Ga0209074_1005100533300027787Agricultural SoilMSPIDPRLQEALDGERDPGELPADLREAHARLIAAAQLVSGTPQLSVAARV
Ga0209283_1001371863300027875Vadose Zone SoilMSPIDPRLQEALDGERDPGRLPADLGEAYTRLISAAQLL
Ga0137415_1109322013300028536Vadose Zone SoilMSPIDPRLQEALDGERDPGDLTLDLREAYTRLTVATQMLKATPLLSVATRVMAEIRLGRPPVLNEGMARRLLHWW
Ga0307301_1003446113300028719SoilMSPIDPRLQEALDGERDPGDLPADLREGYALLVAATQVLKAMPPVSVASRVMAEIR
Ga0307282_1017741713300028784SoilMSPIDQRLQAALDGEGDPGELPMDLRESYALLSAAAQMLKAMPPVSVASRVMTEIRQNPAPVQSAGPAHRLMH
Ga0307497_1000726953300031226SoilMSPIDPRLQEALDGERDPGELPADLREAYDRLTGAAQLLAGTPRLSVA
Ga0307469_1142140813300031720Hardwood Forest SoilMSPIDPRLQEALDGERDPGDLPVDLREAYARLNAATQILKATPPMSVAARVMAEIRQNPA
Ga0307473_1007983133300031820Hardwood Forest SoilMMLDAGGGMSPIDPRLQEALDNERDPGDLPADQQDAYTRLMTAATLLSAKPAVSVADRVMAEIRAMP
Ga0307473_1049843713300031820Hardwood Forest SoilMSPIDPRLQEALDGERDPGTLPADLRDAYDRLTGAAQLLAGTPRLSVAARVMAEVRKTPYPQPG
Ga0307472_10135284323300032205Hardwood Forest SoilMMLDAGGGMSPIDPRLQEALDNERDPGDLPADQQDAYTRLMTAATLLSAKPAVSVADRVMAE

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.