NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F061743

Metagenome / Metatranscriptome Family F061743

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F061743
Family Type Metagenome / Metatranscriptome
Number of Sequences 131
Average Sequence Length 42 residues
Representative Sequence VKVTALAAHTPEAVRAALAARGWEAQPAWFAATGIQPLVIL
Number of Associated Samples 105
Number of Associated Scaffolds 131

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 64.89 %
% of genes near scaffold ends (potentially truncated) 98.47 %
% of genes from short scaffolds (< 2000 bps) 80.92 %
Associated GOLD sequencing projects 99
AlphaFold2 3D model prediction Yes
3D model pTM-score0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (79.389 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(32.061 % of family members)
Environment Ontology (ENVO) Unclassified
(39.695 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(42.748 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 34.78%    β-sheet: 0.00%    Coil/Unstructured: 65.22%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 131 Family Scaffolds
PF02687FtsX 55.73
PF01434Peptidase_M41 16.79
PF12704MacB_PCD 16.03
PF11734TilS_C 1.53
PF00005ABC_tran 1.53
PF01613Flavin_Reduct 1.53
PF16576HlyD_D23 1.53
PF027373HCDH_N 0.76
PF06480FtsH_ext 0.76
PF14534DUF4440 0.76
PF00156Pribosyltran 0.76

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 131 Family Scaffolds
COG0465ATP-dependent Zn proteasesPosttranslational modification, protein turnover, chaperones [O] 17.56
COG1853FMN reductase RutF, DIM6/NTAB familyEnergy production and conversion [C] 1.53
COG0240Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 0.76
COG0287Prephenate dehydrogenaseAmino acid transport and metabolism [E] 0.76
COG0677UDP-N-acetyl-D-mannosaminuronate dehydrogenaseCell wall/membrane/envelope biogenesis [M] 0.76
COG1004UDP-glucose 6-dehydrogenaseCell wall/membrane/envelope biogenesis [M] 0.76
COG12503-hydroxyacyl-CoA dehydrogenaseLipid transport and metabolism [I] 0.76
COG1748Saccharopine dehydrogenase, NADP-dependentAmino acid transport and metabolism [E] 0.76
COG20843-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenaseLipid transport and metabolism [I] 0.76

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms79.39 %
UnclassifiedrootN/A20.61 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002560|JGI25383J37093_10026606All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1939Open in IMG/M
3300002908|JGI25382J43887_10408295All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium574Open in IMG/M
3300002912|JGI25386J43895_10002623All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales4597Open in IMG/M
3300002916|JGI25389J43894_1009552All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1608Open in IMG/M
3300005174|Ga0066680_10661321All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300005180|Ga0066685_10440690All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium904Open in IMG/M
3300005444|Ga0070694_100067986All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → Syntrophorhabdus → Syntrophorhabdus aromaticivorans2447Open in IMG/M
3300005555|Ga0066692_10527240All Organisms → cellular organisms → Bacteria749Open in IMG/M
3300005556|Ga0066707_10539819Not Available753Open in IMG/M
3300005557|Ga0066704_10536413All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium765Open in IMG/M
3300005575|Ga0066702_10842140All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium546Open in IMG/M
3300006031|Ga0066651_10011996All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria3547Open in IMG/M
3300006031|Ga0066651_10121467Not Available1341Open in IMG/M
3300006034|Ga0066656_10185523Not Available1318Open in IMG/M
3300006755|Ga0079222_12633553All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes506Open in IMG/M
3300006794|Ga0066658_10141117Not Available1207Open in IMG/M
3300006794|Ga0066658_10540544Not Available633Open in IMG/M
3300006845|Ga0075421_100127612All Organisms → cellular organisms → Bacteria3190Open in IMG/M
3300006847|Ga0075431_100587673All Organisms → cellular organisms → Bacteria1098Open in IMG/M
3300006852|Ga0075433_10155815All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2032Open in IMG/M
3300007076|Ga0075435_100701658Not Available879Open in IMG/M
3300007255|Ga0099791_10615307All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300007265|Ga0099794_10736711Not Available526Open in IMG/M
3300009012|Ga0066710_103818126All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300009143|Ga0099792_10320102All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium927Open in IMG/M
3300009156|Ga0111538_13941747All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium513Open in IMG/M
3300009162|Ga0075423_10043631All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis4594Open in IMG/M
3300009609|Ga0105347_1367349All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300010126|Ga0127482_1068783All Organisms → cellular organisms → Bacteria961Open in IMG/M
3300010301|Ga0134070_10012751Not Available2668Open in IMG/M
3300010301|Ga0134070_10323056All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium593Open in IMG/M
3300010301|Ga0134070_10400280All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium541Open in IMG/M
3300010304|Ga0134088_10629574All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium535Open in IMG/M
3300010321|Ga0134067_10056817Not Available1271Open in IMG/M
3300010325|Ga0134064_10098458Not Available960Open in IMG/M
3300010329|Ga0134111_10378472Not Available603Open in IMG/M
3300010337|Ga0134062_10011556All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis3257Open in IMG/M
3300010337|Ga0134062_10113692All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1174Open in IMG/M
3300010361|Ga0126378_11213135All Organisms → cellular organisms → Bacteria852Open in IMG/M
3300011429|Ga0137455_1122366All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium769Open in IMG/M
3300011430|Ga0137423_1105539All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium841Open in IMG/M
3300012039|Ga0137421_1030670All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1385Open in IMG/M
3300012198|Ga0137364_10542761Not Available875Open in IMG/M
3300012198|Ga0137364_11095041Not Available600Open in IMG/M
3300012199|Ga0137383_11211025All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes542Open in IMG/M
3300012200|Ga0137382_10014023All Organisms → cellular organisms → Bacteria → Proteobacteria4397Open in IMG/M
3300012200|Ga0137382_10120347All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis1754Open in IMG/M
3300012200|Ga0137382_10229568All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1282Open in IMG/M
3300012200|Ga0137382_10393226All Organisms → cellular organisms → Bacteria976Open in IMG/M
3300012201|Ga0137365_10005513All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria10148Open in IMG/M
3300012203|Ga0137399_10016619All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales4672Open in IMG/M
3300012203|Ga0137399_10697274Not Available855Open in IMG/M
3300012203|Ga0137399_11569666All Organisms → cellular organisms → Bacteria → Proteobacteria546Open in IMG/M
3300012203|Ga0137399_11716012All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300012208|Ga0137376_10025641All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales4604Open in IMG/M
3300012208|Ga0137376_11578899All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300012209|Ga0137379_10248292All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis1693Open in IMG/M
3300012285|Ga0137370_10267699All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1015Open in IMG/M
3300012349|Ga0137387_10095181All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis2068Open in IMG/M
3300012353|Ga0137367_11075084All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300012357|Ga0137384_10064122All Organisms → cellular organisms → Bacteria3047Open in IMG/M
3300012360|Ga0137375_10120703All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis2620Open in IMG/M
3300012360|Ga0137375_11438013All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300012395|Ga0134044_1039403All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1333Open in IMG/M
3300012410|Ga0134060_1526331All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300012685|Ga0137397_10781938Not Available708Open in IMG/M
3300012918|Ga0137396_10803532All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium692Open in IMG/M
3300012922|Ga0137394_11530450All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium525Open in IMG/M
3300012924|Ga0137413_11081489All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium633Open in IMG/M
3300012927|Ga0137416_10015901All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales4673Open in IMG/M
3300012927|Ga0137416_10098198All Organisms → cellular organisms → Bacteria2196Open in IMG/M
3300012927|Ga0137416_10397660All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1167Open in IMG/M
3300012929|Ga0137404_11710551All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300012930|Ga0137407_12209785Not Available526Open in IMG/M
3300012976|Ga0134076_10001906All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis6343Open in IMG/M
3300012977|Ga0134087_10070683Not Available1414Open in IMG/M
3300014150|Ga0134081_10136650Not Available796Open in IMG/M
3300014166|Ga0134079_10538353Not Available570Open in IMG/M
3300014875|Ga0180083_1012194All Organisms → cellular organisms → Bacteria1512Open in IMG/M
3300015241|Ga0137418_10294764All Organisms → cellular organisms → Bacteria1359Open in IMG/M
3300015374|Ga0132255_101458632All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1035Open in IMG/M
3300017656|Ga0134112_10057408All Organisms → cellular organisms → Bacteria1421Open in IMG/M
3300017657|Ga0134074_1204369All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium701Open in IMG/M
3300017659|Ga0134083_10544717All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes524Open in IMG/M
3300018056|Ga0184623_10390179All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300018071|Ga0184618_10460182All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300018076|Ga0184609_10325848All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium718Open in IMG/M
3300018078|Ga0184612_10218124All Organisms → cellular organisms → Bacteria989Open in IMG/M
3300018433|Ga0066667_10877793Not Available770Open in IMG/M
3300018468|Ga0066662_10004832All Organisms → cellular organisms → Bacteria6569Open in IMG/M
3300018482|Ga0066669_11180916All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium690Open in IMG/M
3300018482|Ga0066669_11590426All Organisms → cellular organisms → Bacteria596Open in IMG/M
3300020199|Ga0179592_10193251Not Available924Open in IMG/M
3300021073|Ga0210378_10391038All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium516Open in IMG/M
3300022195|Ga0222625_1199589Not Available1826Open in IMG/M
3300025324|Ga0209640_11229492All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes561Open in IMG/M
3300025327|Ga0209751_10932470All Organisms → cellular organisms → Bacteria664Open in IMG/M
3300025927|Ga0207687_11812327All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300025928|Ga0207700_10033922All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria3658Open in IMG/M
3300026075|Ga0207708_11408000All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium612Open in IMG/M
3300026122|Ga0209926_1072746All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300026298|Ga0209236_1046257All Organisms → cellular organisms → Bacteria2203Open in IMG/M
3300026306|Ga0209468_1164566Not Available565Open in IMG/M
3300026312|Ga0209153_1007919Not Available3319Open in IMG/M
3300026324|Ga0209470_1147627All Organisms → cellular organisms → Bacteria → Proteobacteria1034Open in IMG/M
3300026324|Ga0209470_1202417All Organisms → cellular organisms → Bacteria838Open in IMG/M
3300026324|Ga0209470_1331146Not Available551Open in IMG/M
3300026325|Ga0209152_10484249All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300026327|Ga0209266_1076508All Organisms → cellular organisms → Bacteria1538Open in IMG/M
3300026335|Ga0209804_1122793All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1178Open in IMG/M
3300026343|Ga0209159_1001995All Organisms → cellular organisms → Bacteria14725Open in IMG/M
3300026343|Ga0209159_1057786All Organisms → cellular organisms → Bacteria1859Open in IMG/M
3300026540|Ga0209376_1053659All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae2301Open in IMG/M
3300026540|Ga0209376_1307811All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium619Open in IMG/M
3300027616|Ga0209106_1094098Not Available672Open in IMG/M
3300027643|Ga0209076_1194245All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300027671|Ga0209588_1000376All Organisms → cellular organisms → Bacteria11619Open in IMG/M
3300027875|Ga0209283_10571307All Organisms → cellular organisms → Bacteria720Open in IMG/M
3300027903|Ga0209488_10632770All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium773Open in IMG/M
3300027909|Ga0209382_10349567All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis1656Open in IMG/M
3300027909|Ga0209382_10904900All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium929Open in IMG/M
3300027909|Ga0209382_11993554All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300028536|Ga0137415_10454988All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1086Open in IMG/M
3300028536|Ga0137415_11164562All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300028536|Ga0137415_11383463All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300030730|Ga0307482_1021911All Organisms → cellular organisms → Bacteria1339Open in IMG/M
3300031720|Ga0307469_10425127All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1142Open in IMG/M
3300031720|Ga0307469_10656211All Organisms → cellular organisms → Bacteria946Open in IMG/M
3300031820|Ga0307473_10428901Not Available874Open in IMG/M
3300033813|Ga0364928_0184497All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes520Open in IMG/M
3300034177|Ga0364932_0035147All Organisms → cellular organisms → Bacteria1881Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil32.06%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil17.56%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil14.50%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil7.63%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.87%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil3.82%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.05%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.05%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.29%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.53%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil1.53%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.53%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.76%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.76%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.76%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.76%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.76%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.76%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cmEnvironmentalOpen in IMG/M
3300002908Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002912Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cmEnvironmentalOpen in IMG/M
3300002916Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cmEnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009609Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890EnvironmentalOpen in IMG/M
3300010126Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010321Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015EnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300011429Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2EnvironmentalOpen in IMG/M
3300011430Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2EnvironmentalOpen in IMG/M
3300012039Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT534_2EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012395Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012410Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300014875Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_1_16_10DEnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300022195Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025327Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026122Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_D2_MG (SPAdes)EnvironmentalOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026306Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)EnvironmentalOpen in IMG/M
3300026312Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300026327Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)EnvironmentalOpen in IMG/M
3300026335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)EnvironmentalOpen in IMG/M
3300026343Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300027616Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027643Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)EnvironmentalOpen in IMG/M
3300027671Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300030730Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300033813Sediment microbial communities from East River floodplain, Colorado, United States - 30_j17EnvironmentalOpen in IMG/M
3300034177Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25383J37093_1002660633300002560Grasslands SoilVKLTPLAAHTPEAVRAALAARGWDTQPAWFAATGMQALVVLLEEITEAE
JGI25382J43887_1040829523300002908Grasslands SoilVKVTALAAHTPEAVRAALAARGWDAEPARFAATGIQSLVVLLDDITAT
JGI25386J43895_1000262313300002912Grasslands SoilVKLTPLAAHTPEAVRAALAARGWDTQPAWFAATGMQALVVLLEEITE
JGI25389J43894_100955213300002916Grasslands SoilVKLTPLAPHTPEAVRAALAARGWDTQPAWFAATGMQALVV
Ga0066680_1066132113300005174SoilVKLTALAAHTPEAVRAALAAHGWDAQPAWLAATGVQPLVVL
Ga0066685_1044069013300005180SoilMKVTALAAHTPEAVRAVLAARGWESQPAWFAATGIEPLVVLIEDITETE
Ga0070694_10006798613300005444Corn, Switchgrass And Miscanthus RhizosphereVKLTPLAAQTPEAVRAALAARGWDAQPAWFAATGMQALVVLL
Ga0066692_1052724023300005555SoilVKLTALAAHTPEAVRAALAAHGWDAQPAWLAATGVQPLVVLLEEITEPE
Ga0066707_1053981923300005556SoilVKLTPLAAHTPEAVRAALAARGWDTQPAWFAATGMQ
Ga0066704_1053641313300005557SoilVKLTALAAHTPEAVRAALAARGWGEQPAWLAATGVQRLLVLLDDIS
Ga0066702_1084214013300005575SoilMNVTALAAHTPEAVRAALAARGWESQPAWFAATGIEPLVLLIEDITETE
Ga0066651_1001199613300006031SoilVKLTALAAHTPEAVRAALAARGWETQPAWFAATGVQSLVVLLDEVSEPER
Ga0066651_1012146713300006031SoilVKLTALPAHAPEAVRAALVARGWDVDRAWFAATGVQFLIVLLEDISAA
Ga0066656_1018552323300006034SoilVSARPAVKVTALAAHTPDAVRAALAARGWDAQPAWFAATGV
Ga0079222_1263355323300006755Agricultural SoilVRLTALAAHTPEAVRAALAARGWDAQPAWFAANGVQPL
Ga0066658_1014111713300006794SoilVKLTPLAAHTPEAVRAALAARGWEAQHAWFAAIGMQALVVL
Ga0066658_1054054423300006794SoilVKLTALAAHTPEAVRAALAARGWDAQPAWFAAVGVQSLVVLLE
Ga0075421_10012761243300006845Populus RhizosphereVRVTALATHTTPPEAVRAALAARGWEAQPAWFAATGLQSLVVL
Ga0075431_10058767313300006847Populus RhizosphereVKITALAAHTPEAVRAALAARGWETQPAWFAATGIQPLV
Ga0075433_1015581513300006852Populus RhizosphereVKVTALAAHTPEAVRAALAARGWEAQPAWFAATGV
Ga0075435_10070165813300007076Populus RhizosphereVKLTPLAAHTPEAVRAALAARGWDAQPAWFAATGM
Ga0099791_1061530723300007255Vadose Zone SoilMKVTALAAPTPEAVRAALAARGWEAQPAWFAATGI
Ga0099794_1073671123300007265Vadose Zone SoilVKLTALAVHTPEAVRAALAARGWQTQPAWFAATGMQALVVLLE
Ga0066710_10381812623300009012Grasslands SoilVKMTALAAHTPEAVRAALAARGWEAQPAWFAATGVQALVVLL
Ga0099792_1032010223300009143Vadose Zone SoilVKVTALAAQTPEAVRAALAARGWEAQPAWFAATGIQSLVVLIED
Ga0111538_1394174713300009156Populus RhizosphereVKVTALAAQTPEAVRAALAARGWETQPAWFAATGIQSTVLLLEDI
Ga0075423_1004363113300009162Populus RhizosphereVKVTALAAHTPEAVRAALAARGWEAQPAWFAATGVQAV
Ga0105347_136734923300009609SoilLKVTALAAQTPEAVRAALAARGWEAQPAWFAAVGIQPLVVL
Ga0127482_106878313300010126Grasslands SoilMKITALAAHTPEAVRAALAARGWETQPAWFAATGIEPLVVLIEE
Ga0134070_1001275113300010301Grasslands SoilVKLTPLAAHTPEAVRAALAARGWDAQPAWFAATGVQSLVVLL
Ga0134070_1032305633300010301Grasslands SoilVKLTLLASHTPEAVRAALTARGWDAQPAWFAATGV
Ga0134070_1040028013300010301Grasslands SoilVRVTALAAHTPEAVRAALAARGWEAQPARFAATGIQPFVVL
Ga0134088_1062957413300010304Grasslands SoilVKVTALAAHTPEAVRAALAARGWEAQPAWFAATGIQPLVILIEDITES
Ga0134067_1005681713300010321Grasslands SoilVKLTSLAAHTPEAVRAALAARGWEAQPAWFAATGVQSLVVLLED
Ga0134064_1009845813300010325Grasslands SoilVKVTALAAHTPDAVRAALAARGWDAQPAWFAATGVQ
Ga0134111_1037847213300010329Grasslands SoilVRLTPLAAHTPEAVRAALAARGWETQPAWFAATGVQSL
Ga0134062_1001155653300010337Grasslands SoilVKVTALAAQTPEAVRAALAARGWEGQPAWFAAVGIQALVVLIE
Ga0134062_1011369213300010337Grasslands SoilVKVTALAAHTPDAVRAALAARGWDAQPAWFAATGVQT
Ga0126378_1121313523300010361Tropical Forest SoilVKVTALAAHTPQAVRAALAARGWESQPAWFAATGI
Ga0137455_112236623300011429SoilVKVTALAAQTPEAVRAALAARGWEAQPAWFAAVGIQPLVVLI
Ga0137423_110553923300011430SoilVKVTALAAQTPEAVRAALAARGWEAQPAWFAAVGIQPL
Ga0137421_103067013300012039SoilVKVTALAAQTPEAVRAALAARGWEAQPAWFAAVGIQPLV
Ga0137364_1054276123300012198Vadose Zone SoilVKLTPLAAHTPEAVRAALAARGWDTQPAWFAATGMQALV
Ga0137364_1109504113300012198Vadose Zone SoilVTALAAHTPEAVRAALAARGWDSQPAWFAATGVQALVVLLDGVTEAE
Ga0137383_1121102513300012199Vadose Zone SoilVKLTALAAHTPEAVRAALAARGWEPQASWFAATGVHAVVVLLEDID
Ga0137382_1001402353300012200Vadose Zone SoilVKITAVAAHTPEAVRAALAARGWEAQPAWFAAIGIQPFVVL
Ga0137382_1012034733300012200Vadose Zone SoilVKVTALAAHTPEAVRAALAARGWEAQPAWFAATGIQPLVIL
Ga0137382_1022956823300012200Vadose Zone SoilVKVTALAAHTPEAVRAALAARGWETQPAWFAATGIEPLVVLIEE
Ga0137382_1039322623300012200Vadose Zone SoilMKITAVAAHTPEAVRAALAARGWEAQPAWFAAIGIQPFVVL
Ga0137365_10005513103300012201Vadose Zone SoilVKLTALAAHTPEAVRAALAARGWDAQPAWFAATGIQSLVVLL
Ga0137399_1001661963300012203Vadose Zone SoilVKVTALAAHTPEAVRAALAARGWEAQPAWFAAIGIQSFVVLIE
Ga0137399_1069727423300012203Vadose Zone SoilVRVTALAAHTSPPEAVRAALAARGWEAQPAWFAATGVQSLVVLLEEITE
Ga0137399_1156966633300012203Vadose Zone SoilVTALAAHTPEAVRAALAARGWEAQPAWFAAIGIQSFVVLIED
Ga0137399_1171601213300012203Vadose Zone SoilVSARPAVKLTALAAHTPEAVRAALAARGWEAQPAWFAATGMQ
Ga0137376_1002564113300012208Vadose Zone SoilMNVTALAAHTPEAVRAALAARGWEPQPAWFAAVGIQPFVVLIE
Ga0137376_1157889913300012208Vadose Zone SoilMKITALAAHTPEAVRAALAARGWEPQPAWFAAVGIQPFVVLIE
Ga0137379_1024829233300012209Vadose Zone SoilVKVTALAAHTPEAVRAVLAARGWEAQPAWFAATGIQPLVVLLEDITA
Ga0137370_1026769923300012285Vadose Zone SoilVKVTALAAHTPEAVRAALAARGWETQPAWFAASGI
Ga0137387_1009518113300012349Vadose Zone SoilVRVTALAAHSPEALRAALVARGWDGQPAWLAATGVQ
Ga0137367_1107508413300012353Vadose Zone SoilLKVTALAAHTPEAVRAALAARGWEAQPAWFAATGIQPFV
Ga0137384_1006412243300012357Vadose Zone SoilVKVTALAAHTSPPEAVRAALAARGWEAQPAWFAATGVQSLVVLLEDISES
Ga0137375_1012070343300012360Vadose Zone SoilVRVTALAAHTPEAVRAALAARGWEAQPAWFAAVGIQPFVVLIE
Ga0137375_1143801323300012360Vadose Zone SoilMNVTALAAHTPEAVRAALAARGWEAQPAWFAAVGIQPFVVLIE
Ga0134044_103940313300012395Grasslands SoilVKVTALAAQTPEAVRAALAARGWEGQPAWFAAVGIQALVVL
Ga0134060_152633113300012410Grasslands SoilMKITALAAHTPEAVRAALAARGWETQPAWFAAVGIQPFVALIEDIS
Ga0137397_1078193813300012685Vadose Zone SoilVKVTALAAHTPEAVRAALAARGWEGQPAWFAATGIQPFVVLIEDITEEE
Ga0137396_1080353213300012918Vadose Zone SoilVNVTALAAHTPEAVRAALAARGWEAQPAWFAATGMQ
Ga0137394_1153045013300012922Vadose Zone SoilVRVTALAAHTPEAVRAALAARGWEGQPAWFAATGIQPFVVLIEDITE
Ga0137413_1108148913300012924Vadose Zone SoilVKVTALAAQTPEAVRAALAARGWEAQPAWFAATGI
Ga0137416_1001590163300012927Vadose Zone SoilVKVTALAAHTPEAVRAALAARGWEAQPAWFAAIGIQSFVVLIED
Ga0137416_1009819813300012927Vadose Zone SoilMKVTALAAHTPEAVRAALAARGWEAQPAWFAAVGIQPFV
Ga0137416_1039766013300012927Vadose Zone SoilLKVTALAAHTPEAVRAALAARGWEAQPAWFAAVGIQPFVVLIEAISEAERE
Ga0137404_1171055123300012929Vadose Zone SoilVKLTPLAPHTPEAVRAALAARGWDTQPAWFAATGMQALVVLLEEI
Ga0137407_1220978513300012930Vadose Zone SoilVKLTPLAAHTPEAVRAALAARGWDTQPAWFAATGMQALLVL
Ga0134076_1000190663300012976Grasslands SoilMKVTALAAHTPEAVRAVLAARGWESQPAWFAATGI*
Ga0134087_1007068333300012977Grasslands SoilVKLTALAAHTPEAVRAALAARGWDAQPAWFAAVGVQSLVVLLEDVA
Ga0134081_1013665013300014150Grasslands SoilVKLTALAAHTPEAVRAALAARGWDADPARFAAIGMQSVVLLLEGISET
Ga0134079_1053835323300014166Grasslands SoilVRLTPLAAHTPEAVRAALAARGWDAQPAWFAATGIQALVI
Ga0180083_101219413300014875SoilVKVTALAAHTPEAVRAALAARGWEPHAAWLAASGVQFLLLLLEHISEA
Ga0137418_1029476423300015241Vadose Zone SoilVRVTALAAHTPEAVRAALAARGWEGQPAWFAATGIQPFVVLIED
Ga0132255_10145863223300015374Arabidopsis RhizosphereVTALAAQTPEAVRAALAARGWETQPAWFAATGIQATVL
Ga0134112_1005740813300017656Grasslands SoilVKVTALAAHTPEAVRAALAARGWDADPAWFAATGLQPLVV
Ga0134074_120436923300017657Grasslands SoilVRVTALAAHTPEAVRAALAARGWEAQPAWFAATGIQPFVVL
Ga0134083_1054471723300017659Grasslands SoilVRLTALAAHTPEAVRAALAARGWDAQPAWFAATGVE
Ga0184623_1039017913300018056Groundwater SedimentVKVTALAAHTPEAVRAALAARGWESDAAWFAATGLRHLVLLLEGVTE
Ga0184618_1046018223300018071Groundwater SedimentVRVTALAAPTSPPEAVRAALAARGWEAQPAWFAATGVQSLVVILEA
Ga0184609_1032584813300018076Groundwater SedimentVRVTALAAHTPEAVRAALAARGWEGQPAWFAATGIQ
Ga0184612_1021812423300018078Groundwater SedimentMKVTALAAHTPEAVRAALAARGWEGQPAWFAATGIQTF
Ga0066667_1087779313300018433Grasslands SoilVKLTPLAAHTPEAVRAALAARGWDTQPAWFAATGMQA
Ga0066662_1000483273300018468Grasslands SoilVKVTALAAHTPEAVRAALVARGWDAQPAWFAASGVRPLAVIL
Ga0066669_1118091623300018482Grasslands SoilVKLTALAAHTPEAVRAALAAHGWEAQPAWFAATGIQPFVVL
Ga0066669_1159042623300018482Grasslands SoilVKVTALAAHTPEAVRAALAARGWDAQPAWFAATGVQPLAVILE
Ga0179592_1019325123300020199Vadose Zone SoilVKLTALAVHTPEAVRAALAARGWETQPAWFAATGMQALVVLLEE
Ga0210378_1039103823300021073Groundwater SedimentVRVTALAAHTPEAVRAALAARGWEAQPAWFAATGIQTFVVLIEDITED
Ga0222625_119958943300022195Groundwater SedimentMKVTALAAHTPEAVRAALAARGWEAQPAWFAAVGIQPFVVLIEAI
Ga0209640_1122949223300025324SoilVRLTALAAHTPEAVRAALAVRGWEPHASGLAAAGLRGL
Ga0209751_1093247023300025327SoilVKVTALAAHTPEAVRAALAARGWEGQPAWFAAIGVRSL
Ga0207687_1181232723300025927Miscanthus RhizosphereVKVTALAAQTPEAVRAALAARGWDTQPAWFAATGIQTTVL
Ga0207700_1003392253300025928Corn, Switchgrass And Miscanthus RhizosphereVKLTALAAHTPEAVRAALAARGWDAQPAWFAATGVQSLVVLLEE
Ga0207708_1140800013300026075Corn, Switchgrass And Miscanthus RhizosphereVKVTALAAPTPEAVRAALAARGWEAQPAWFAATGIQATVFLLED
Ga0209926_107274613300026122SoilVKLTALAAHTPHAVRAALAARGWEGQPAWFAAVGLRPLVV
Ga0209236_104625733300026298Grasslands SoilVKLTPLAPHTPEAVRAALAARGWDTQPAWFAATGMQALVVLLEEITEAE
Ga0209468_116456613300026306SoilVKLTALAAHTPEAVRAALAARGWETQPAWFAATGVQS
Ga0209153_100791953300026312SoilVKLTPLAAHTPEAVRAALAARGWDAQPAWFAATGVQALVVLLEDVTEP
Ga0209470_114762723300026324SoilVKVTALAAHTPDAVRAALAARGWDAQPAWFAATGVQTLVVLLDEITE
Ga0209470_120241723300026324SoilVKLTALAAHTPEAVRAALAAHGWDAQPAWLAATGVQPLVVLLEEI
Ga0209470_133114613300026324SoilVKLTPLAAHTPDSVRAALAARGWDAQPAWFAATGMQALV
Ga0209152_1048424923300026325SoilVKLTPLAAHTPEAVRAALAARGWDAQPASFAATGMQALVV
Ga0209266_107650813300026327SoilVKVTALAAQTPEAVRAALAARGWEGQPAWFAAVGIQP
Ga0209804_112279323300026335SoilVKLTPLAAHTPEAVRAALAARGWEAQPAWFAATGVQCLVVLLEDVT
Ga0209159_100199513300026343SoilVKVTALAAHTPEAVRAALAARGWDAQPAWFAATGVQPLAVILEDLTGAE
Ga0209159_105778613300026343SoilVKLTALAAHTPEAVRAALAARGWDPQPARFAAIGVQP
Ga0209376_105365913300026540SoilVKATALAAHTPEAVRAALAARGWDAQPASFAATGMQPLVV
Ga0209376_130781113300026540SoilMKVTALAAHTPEAVRAVLAARGWESQPAWFAATGIEPLVVLIEDITE
Ga0209106_109409823300027616Forest SoilVKLTALAAHTPEAVRAALAARGWEAQPAWFAATGMQALVVLLEEVTEAE
Ga0209076_119424523300027643Vadose Zone SoilVRITALAAHTPEAVRAALAARGWETQPAWFAAIGIQPFVVLIDDIS
Ga0209588_100037613300027671Vadose Zone SoilMKVTALAAHTPEAVRAALAARGWEAQPAWFAATGIEPLV
Ga0209283_1057130713300027875Vadose Zone SoilVKLTALAAHTPEAVRAALAAHGWDAQPAWLAATGVQPL
Ga0209488_1063277023300027903Vadose Zone SoilVKVTALAAHTPEAVRAALAARGWEAQPAGFAAIGIQPFVVLI
Ga0209382_1034956713300027909Populus RhizosphereVKITALAAHTPEAVRAALAARGWETQPAWFAATGIQPLVILI
Ga0209382_1090490023300027909Populus RhizosphereVKVTALAAHTPEAVRAALAARGWEAQPAWFAATGIQSIVVLFEDIT
Ga0209382_1199355423300027909Populus RhizosphereVRVTALAAPTTPPEAVRAALAARGWEAQPAWFAATGVQSLVVLLEEITEDE
Ga0137415_1045498813300028536Vadose Zone SoilLKVTALGAHTPEAVRAALAARGWEAQPAWFAAVGIQPFVVLI
Ga0137415_1116456213300028536Vadose Zone SoilVKVTALAAHTSQPEAVRAALAARGWEAQPAWFAATGIQALVVLIEA
Ga0137415_1138346323300028536Vadose Zone SoilVKLTLLASHTPEAVRAALTARGWDAQPAWFAATGVQPL
Ga0307482_102191113300030730Hardwood Forest SoilVKLTALAAHTPEAVRAVLVAHGWDDERATLAALGLQTVP
Ga0307469_1042512713300031720Hardwood Forest SoilVKVTALAAQTPEAVRAALAARGWEGQPAWFAATGIQPFVVLIEDITE
Ga0307469_1065621113300031720Hardwood Forest SoilVKLTALAAHTPEAVRAALAARGWEPQPAWLAATGV
Ga0307473_1042890123300031820Hardwood Forest SoilVKLTALAVHTPEAVRAALAARGWDTQPAWFAATGMQALVVLL
Ga0364928_0184497_2_1243300033813SedimentVRLTALAAHTPEAVRAALAACGWDDAPARLAALGVQPLTLL
Ga0364932_0035147_1774_18813300034177SedimentMKVTALATHTSPPEAVRAALAARGWEAQPAWFAAAG

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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