Metagenome Family F061757

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061757
Family Type	Metagenome
Number of Sequences	131
Average Sequence Length	62 residues
Representative Sequence	VAEETVYMRTTRKALEASGGANSLAAVLGRPLDEINDWLAGREVPPDRVFLELLEIVSRRR
Number of Associated Samples	108
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	59.84 %
% of genes near scaffold ends (potentially truncated)	19.08 %
% of genes from short scaffolds (< 2000 bps)	75.57 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.79

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.947 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (19.847 % of family members)
Environment Ontology (ENVO)	Unclassified (30.534 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.198 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.07% β-sheet: 0.00% Coil/Unstructured: 53.93%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.79
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.79
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.35.1.3: SinR domain-like	d2xi8a_	2xi8	0.74582
a.35.1.2: Phage repressors	d3jxbc_	3jxb	0.71753
a.35.1.0: automated matches	d3vk0a_	3vk0	0.71483
a.35.1.12: EDF1-like	d1x57a1	1x57	0.71392
a.35.1.6: YdiL-like	d2ox6a1	2ox6	0.70344

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF00072	Response_reg	23.66
PF01656	CbiA	6.11
PF07859	Abhydrolase_3	3.05
PF00202	Aminotran_3	3.05
PF15943	YdaS_antitoxin	2.29
PF00135	COesterase	2.29
PF12695	Abhydrolase_5	1.53
PF07075	DUF1343	1.53
PF00106	adh_short	0.76
PF00232	Glyco_hydro_1	0.76
PF01209	Ubie_methyltran	0.76
PF13414	TPR_11	0.76
PF05013	FGase	0.76
PF02518	HATPase_c	0.76
PF00069	Pkinase	0.76
PF02738	MoCoBD_1	0.76
PF07883	Cupin_2	0.76
PF12697	Abhydrolase_6	0.76
PF04402	SIMPL	0.76
PF00920	ILVD_EDD	0.76
PF08443	RimK	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.05
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	3.05
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	2.29
COG0129	Dihydroxyacid dehydratase/phosphogluconate dehydratase	Carbohydrate transport and metabolism [G]	1.53
COG3876	Exo-beta-N-acetylmuramidase YbbC/NamZ, DUF1343 family	Cell wall/membrane/envelope biogenesis [M]	1.53
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.76
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.76
COG2723	Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase	Carbohydrate transport and metabolism [G]	0.76
COG2859	Outer membrane channel-forming protein BP26/OMP28, SIMPL family	Cell wall/membrane/envelope biogenesis [M]	0.76
COG2968	Uncharacterized conserved protein YggE, contains kinase-interacting SIMPL domain	Function unknown [S]	0.76
COG3471	Predicted secreted (periplasmic) protein	Function unknown [S]	0.76
COG3741	N-formylglutamate amidohydrolase	Amino acid transport and metabolism [E]	0.76
COG3931	Predicted N-formylglutamate amidohydrolase	Amino acid transport and metabolism [E]	0.76

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.95 %
Unclassified	root	N/A	3.05 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.95 %
Unclassified	root	N/A	3.05 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.95 %
Unclassified	root	N/A	3.05 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	84.73 %
Unclassified	root	N/A	3.05 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.76 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	38.17 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6.87 %
Unclassified	root	N/A	3.05 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.76 %

Name	Rank	Taxonomy	Distribution
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	17.56 %
Unclassified	root	N/A	3.05 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.29 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	1.53 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.76 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.76 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	17.56 %
Unclassified	root	N/A	3.05 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	1.53 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.76 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	0.76 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.76 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	17.56 %
Unclassified	root	N/A	3.05 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.76 %
Methylomagnum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum	0.76 %
Methylocaldum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum	0.76 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.76 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.76 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	17.56 %
Unclassified	root	N/A	3.05 %
Methylomagnum ishizawai	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	0.76 %
Zavarzinella	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella	0.76 %
Methylocaldum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum	0.76 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.76 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.76 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	17.56 %
Unclassified	root	N/A	3.05 %
unclassified Zavarzinella	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → unclassified Zavarzinella	0.76 %
Methylomagnum ishizawai	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	0.76 %
Methylocaldum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum	0.76 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.76 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.76 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	17.56 %
Unclassified	root	N/A	3.05 %
Zavarzinella sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → unclassified Zavarzinella → Zavarzinella sp.	0.76 %
Methylomagnum ishizawai	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	0.76 %
Methylocaldum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum	0.76 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.76 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000156\|NODE_c0735477	All Organisms → cellular organisms → Bacteria → Proteobacteria	9729	Open in IMG/M
3300000953\|JGI11615J12901_10375975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	539	Open in IMG/M
3300002906\|JGI25614J43888_10000198	All Organisms → cellular organisms → Bacteria → Proteobacteria	16541	Open in IMG/M
3300002908\|JGI25382J43887_10050734	All Organisms → cellular organisms → Bacteria → Proteobacteria	2256	Open in IMG/M
3300002912\|JGI25386J43895_10138118	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300002917\|JGI25616J43925_10022932	All Organisms → cellular organisms → Bacteria	2768	Open in IMG/M
3300003267\|soilL1_10016627	All Organisms → cellular organisms → Bacteria → Proteobacteria	9805	Open in IMG/M
3300003267\|soilL1_10018782	All Organisms → cellular organisms → Bacteria → Proteobacteria	2883	Open in IMG/M
3300003267\|soilL1_10085901	All Organisms → cellular organisms → Bacteria → Proteobacteria	2920	Open in IMG/M
3300003319\|soilL2_10147973	All Organisms → cellular organisms → Bacteria → Proteobacteria	1180	Open in IMG/M
3300003321\|soilH1_10004003	All Organisms → cellular organisms → Bacteria → Proteobacteria	3454	Open in IMG/M
3300003321\|soilH1_10026752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4165	Open in IMG/M
3300003322\|rootL2_10297766	All Organisms → cellular organisms → Bacteria → Proteobacteria	1479	Open in IMG/M
3300003324\|soilH2_10119153	All Organisms → cellular organisms → Bacteria → Proteobacteria	1840	Open in IMG/M
3300003324\|soilH2_10123768	All Organisms → cellular organisms → Bacteria	1484	Open in IMG/M
3300003465\|P52013CM_1013766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3317	Open in IMG/M
3300004081\|Ga0063454_100074121	All Organisms → cellular organisms → Bacteria → Proteobacteria	1494	Open in IMG/M
3300004114\|Ga0062593_100041527	All Organisms → cellular organisms → Bacteria → Proteobacteria	2763	Open in IMG/M
3300004153\|Ga0063455_100239902	All Organisms → cellular organisms → Bacteria → Proteobacteria	938	Open in IMG/M
3300004153\|Ga0063455_101468614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	530	Open in IMG/M
3300004156\|Ga0062589_100163017	All Organisms → cellular organisms → Bacteria → Proteobacteria	1550	Open in IMG/M
3300005171\|Ga0066677_10171519	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300005172\|Ga0066683_10253110	All Organisms → cellular organisms → Bacteria → Proteobacteria	1092	Open in IMG/M
3300005175\|Ga0066673_10184280	All Organisms → cellular organisms → Bacteria → Proteobacteria	1182	Open in IMG/M
3300005176\|Ga0066679_10002700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7615	Open in IMG/M
3300005176\|Ga0066679_10005629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5806	Open in IMG/M
3300005180\|Ga0066685_10809290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	634	Open in IMG/M
3300005187\|Ga0066675_10227552	All Organisms → cellular organisms → Bacteria → Proteobacteria	1323	Open in IMG/M
3300005187\|Ga0066675_10802774	All Organisms → cellular organisms → Bacteria → Proteobacteria	711	Open in IMG/M
3300005330\|Ga0070690_100091957	All Organisms → cellular organisms → Bacteria → Proteobacteria	2000	Open in IMG/M
3300005336\|Ga0070680_100347800	All Organisms → cellular organisms → Bacteria → Proteobacteria	1260	Open in IMG/M
3300005336\|Ga0070680_100794610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum	815	Open in IMG/M
3300005440\|Ga0070705_100009911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4753	Open in IMG/M
3300005445\|Ga0070708_101304447	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → unclassified Zavarzinella → Zavarzinella sp.	678	Open in IMG/M
3300005446\|Ga0066686_10738435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	661	Open in IMG/M
3300005459\|Ga0068867_102261781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	516	Open in IMG/M
3300005467\|Ga0070706_100467620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1173	Open in IMG/M
3300005471\|Ga0070698_101943748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	541	Open in IMG/M
3300005518\|Ga0070699_100025900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5057	Open in IMG/M
3300005518\|Ga0070699_101260231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	678	Open in IMG/M
3300005529\|Ga0070741_11184834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	645	Open in IMG/M
3300005536\|Ga0070697_101711407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	562	Open in IMG/M
3300005544\|Ga0070686_100182493	All Organisms → cellular organisms → Bacteria → Proteobacteria	1492	Open in IMG/M
3300005544\|Ga0070686_100455775	All Organisms → cellular organisms → Bacteria → Proteobacteria	984	Open in IMG/M
3300005545\|Ga0070695_101066544	All Organisms → cellular organisms → Bacteria → Proteobacteria	660	Open in IMG/M
3300005556\|Ga0066707_10938927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	529	Open in IMG/M
3300005560\|Ga0066670_10565504	All Organisms → cellular organisms → Bacteria → Proteobacteria	694	Open in IMG/M
3300005574\|Ga0066694_10604801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	511	Open in IMG/M
3300005586\|Ga0066691_10208840	All Organisms → cellular organisms → Bacteria → Proteobacteria	1139	Open in IMG/M
3300005586\|Ga0066691_10402251	All Organisms → cellular organisms → Bacteria → Proteobacteria	814	Open in IMG/M
3300005617\|Ga0068859_102789543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	536	Open in IMG/M
3300006032\|Ga0066696_10410653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	884	Open in IMG/M
3300006046\|Ga0066652_100195928	All Organisms → cellular organisms → Bacteria → Proteobacteria	1735	Open in IMG/M
3300006046\|Ga0066652_101028766	All Organisms → cellular organisms → Bacteria → Proteobacteria	781	Open in IMG/M
3300006755\|Ga0079222_10645168	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300006755\|Ga0079222_12463611	All Organisms → cellular organisms → Bacteria → Proteobacteria	522	Open in IMG/M
3300006755\|Ga0079222_12530529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	516	Open in IMG/M
3300006804\|Ga0079221_10341256	All Organisms → cellular organisms → Bacteria → Proteobacteria	899	Open in IMG/M
3300006806\|Ga0079220_11786996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	541	Open in IMG/M
3300006852\|Ga0075433_11842380	All Organisms → cellular organisms → Bacteria → Proteobacteria	520	Open in IMG/M
3300006854\|Ga0075425_100232825	All Organisms → cellular organisms → Bacteria → Proteobacteria	2119	Open in IMG/M
3300006871\|Ga0075434_100467816	All Organisms → cellular organisms → Bacteria → Proteobacteria	1282	Open in IMG/M
3300006880\|Ga0075429_101983291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	504	Open in IMG/M
3300006904\|Ga0075424_101728464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	662	Open in IMG/M
3300007076\|Ga0075435_100014718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	5861	Open in IMG/M
3300007076\|Ga0075435_100745059	All Organisms → cellular organisms → Bacteria → Proteobacteria	852	Open in IMG/M
3300007076\|Ga0075435_100936225	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300009147\|Ga0114129_11852152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	733	Open in IMG/M
3300010039\|Ga0126309_10375975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	843	Open in IMG/M
3300010046\|Ga0126384_11598631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	614	Open in IMG/M
3300010397\|Ga0134124_12765030	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300010399\|Ga0134127_11671336	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300010399\|Ga0134127_12867629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	561	Open in IMG/M
3300010400\|Ga0134122_10291055	All Organisms → cellular organisms → Bacteria → Proteobacteria	1398	Open in IMG/M
3300010403\|Ga0134123_10826768	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300012203\|Ga0137399_10036801	All Organisms → cellular organisms → Bacteria → Proteobacteria	3436	Open in IMG/M
3300012203\|Ga0137399_10930219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	732	Open in IMG/M
3300012203\|Ga0137399_11515939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	558	Open in IMG/M
3300012205\|Ga0137362_11558018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	548	Open in IMG/M
3300012212\|Ga0150985_100858538	All Organisms → cellular organisms → Bacteria → Proteobacteria	1424	Open in IMG/M
3300012212\|Ga0150985_108310387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	657	Open in IMG/M
3300012212\|Ga0150985_116906177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1309	Open in IMG/M
3300012469\|Ga0150984_105158862	All Organisms → cellular organisms → Bacteria → Proteobacteria	1413	Open in IMG/M
3300012685\|Ga0137397_10068823	All Organisms → cellular organisms → Bacteria → Proteobacteria	2559	Open in IMG/M
3300012918\|Ga0137396_10575570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	833	Open in IMG/M
3300012922\|Ga0137394_10041555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3771	Open in IMG/M
3300012923\|Ga0137359_10035719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4284	Open in IMG/M
3300012944\|Ga0137410_10441013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1055	Open in IMG/M
3300015162\|Ga0167653_1024148	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300015245\|Ga0137409_10186810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1874	Open in IMG/M
3300017654\|Ga0134069_1114889	All Organisms → cellular organisms → Bacteria → Proteobacteria	884	Open in IMG/M
3300018468\|Ga0066662_11286703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	748	Open in IMG/M
3300018482\|Ga0066669_12241690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	519	Open in IMG/M
3300020202\|Ga0196964_10009267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4154	Open in IMG/M
3300020215\|Ga0196963_10433446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	591	Open in IMG/M
3300025905\|Ga0207685_10837790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	508	Open in IMG/M
3300025912\|Ga0207707_10012226	All Organisms → cellular organisms → Bacteria → Proteobacteria	7463	Open in IMG/M
3300025917\|Ga0207660_10647457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	861	Open in IMG/M
3300025918\|Ga0207662_10511466	All Organisms → cellular organisms → Bacteria → Proteobacteria	828	Open in IMG/M
3300025936\|Ga0207670_11141777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	658	Open in IMG/M
3300026297\|Ga0209237_1051728	All Organisms → cellular organisms → Bacteria → Proteobacteria	2060	Open in IMG/M
3300026304\|Ga0209240_1032616	All Organisms → cellular organisms → Bacteria → Proteobacteria	1985	Open in IMG/M
3300026309\|Ga0209055_1017723	All Organisms → cellular organisms → Bacteria → Proteobacteria	3492	Open in IMG/M
3300026319\|Ga0209647_1001152	All Organisms → cellular organisms → Bacteria → Proteobacteria	23037	Open in IMG/M
3300026325\|Ga0209152_10207801	All Organisms → cellular organisms → Bacteria → Proteobacteria	735	Open in IMG/M
3300026325\|Ga0209152_10428938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	526	Open in IMG/M
3300026326\|Ga0209801_1155931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	959	Open in IMG/M
3300026342\|Ga0209057_1009067	All Organisms → cellular organisms → Bacteria → Proteobacteria	6373	Open in IMG/M
3300026542\|Ga0209805_1134231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1157	Open in IMG/M
3300026547\|Ga0209156_10406957	All Organisms → cellular organisms → Bacteria → Proteobacteria	568	Open in IMG/M
3300026550\|Ga0209474_10566528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	578	Open in IMG/M
3300027725\|Ga0209178_1416583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	512	Open in IMG/M
3300028536\|Ga0137415_10885134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	703	Open in IMG/M
3300031366\|Ga0307506_10212900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	716	Open in IMG/M
3300031548\|Ga0307408_102456782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	506	Open in IMG/M
3300031716\|Ga0310813_10925936	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300031720\|Ga0307469_10171999	All Organisms → cellular organisms → Bacteria	1653	Open in IMG/M
3300031858\|Ga0310892_11150473	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300031911\|Ga0307412_11538598	All Organisms → cellular organisms → Bacteria → Proteobacteria	606	Open in IMG/M
3300031938\|Ga0308175_101102868	All Organisms → cellular organisms → Bacteria → Proteobacteria	880	Open in IMG/M
3300032002\|Ga0307416_103374894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	534	Open in IMG/M
3300032122\|Ga0310895_10520466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	600	Open in IMG/M
3300032180\|Ga0307471_101888387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	747	Open in IMG/M
3300032211\|Ga0310896_10146018	All Organisms → cellular organisms → Bacteria → Proteobacteria	1116	Open in IMG/M
3300033412\|Ga0310810_11000247	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300033550\|Ga0247829_11064612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	671	Open in IMG/M
3300034268\|Ga0372943_0167342	All Organisms → cellular organisms → Bacteria	1346	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.73%
Host-Associated	Host-Associated	14.50%
Engineered	Engineered	0.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.73%
Plants	Host-Associated → Plants	14.50%
Solid Waste	Engineered → Solid Waste	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.82%
Rhizome	Host-Associated → Plants → Rhizome	0.76%
Grass	Engineered → Solid Waste → Grass	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.65%
Loam	Environmental → Terrestrial → Soil → Loam	17.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.16%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.29%
Sand	Environmental → Terrestrial → Soil → Sand	1.53%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.53%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	0.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.76%
Composting	Engineered → Solid Waste → Grass → Composting	0.76%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	27.48%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	12.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.16%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.82%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.29%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	1.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.53%
Mine Drainage	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage	0.76%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.76%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	19.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.40%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.87%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	6.11%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.58%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.82%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.82%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.82%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.29%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.29%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.53%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.53%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.76%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.76%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.76%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.76%
Ore Pile And Mine Drainage Contaminated Soil	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage → Ore Pile And Mine Drainage Contaminated Soil	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.76%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	0.76%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.76%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003322	Sugarcane root Sample L2	Host-Associated	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300003465	Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P5 sample	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015162	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4c, rock/ice/stream interface)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300020215	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_5	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
NODE_07354773	3300000156	Sugar Cane Bagasse Incubating Bioreactor	VAEETVYTRTTRKALEAAGGVQQLAARLRRTLEEINDWLAGRQVPPDSTFLEMLEIVSRRR*
JGI11615J12901_103759752	3300000953	Soil	LGDETVYTRTTRKALEAAGGAGELACALDRPLREVQDWLDGRAVPPDRVFMELLEIVSRRR*
JGI25614J43888_100001987	3300002906	Grasslands Soil	VAEETVYMRTARKALEAVGGADALAAALGRPLAEVHDWLAGREVPPDRAFLELLEIVSRRR*
JGI25382J43887_100507343	3300002908	Grasslands Soil	MRTTRKALEASGGAHSLAAVLGRPLDDINDWLAGREVPPDRVFLELLEIVSRRR*
JGI25386J43895_101381181	3300002912	Grasslands Soil	LAEETVYMRTTRKALEASGGAHSLAAVLGRPLDDINDWLAGREVPPDRVFLELLEIVSRRR*
JGI25616J43925_100229321	3300002917	Grasslands Soil	VRRQVAEETVYMRTARKALEAVGGADALAATLGRPLAQVQDWLAGREVPPDRAFLELLEIVSRRR*
soilL1_1001662712	3300003267	Sugarcane Root And Bulk Soil	VADETVYMRTTRKALEAAGGAESLARALARPLNDIHDWLAGRVVPPDQTFLDLLEIVSRRR*
soilL1_100187824	3300003267	Sugarcane Root And Bulk Soil	VAEETVYMRTTRKALEAAGGAESLARALARPLDDIKDWLAGRVVPPDQTFLDLLEIVSRRR*
soilL1_100859013	3300003267	Sugarcane Root And Bulk Soil	MSGGGVAEQTIYTRTTRKALEAVGGAQELAAALGRPLEEVNDWLAGREVPPDGAFLELLEIVSRRRR*
soilL2_101479732	3300003319	Sugarcane Root And Bulk Soil	MAEETVYSRTTRKALEAAGGGDALAKALGRTLAEIEEWLAGRQVPPDKIFLHLLEIVSRRR*
soilH1_100040033	3300003321	Sugarcane Root And Bulk Soil	VADETVYMRTTRKALEAAGGAESLARLLAKPLGDIQDWLTGRVVPPDRTFLELLEIVSRRR*
soilH1_100267523	3300003321	Sugarcane Root And Bulk Soil	VSDETVYMRTTRKALEAAGGAESLARMLARPLKDVQDWLAGRVVPPDRTFLDLLEIVSRRR*
rootL2_102977662	3300003322	Sugarcane Root And Bulk Soil	VADETVYMRTTRKALEAAGGAESLARALARSLNDIHDWLAGRVVPPDQTFLDLLEIVSRRR*
soilH2_101191533	3300003324	Sugarcane Root And Bulk Soil	MRTTRKALEAAGGAESLARLLAKPLGDIQDWLTGRVVPPDRTFLELLEIVSRRR*
soilH2_101237683	3300003324	Sugarcane Root And Bulk Soil	MRTTRKAMEAAGGEESLARRLACPVGDIQDWLSGRVVPPDKVFLELLEIVSRRR*
P52013CM_10137662	3300003465	Ore Pile And Mine Drainage Contaminated Soil	VSEENVYTRTTRKALEAAGGAEALAQQLARPVDEIRDWLAGRAVPPDRAFLDLLEIVSRRR*
Ga0063454_1000741212	3300004081	Soil	MTGGRVAEQTIYTRTTRKALEAVGGAEALAAALGRPIEQVNEWLAGREVPPDAAFLQLLEIVSRRR*
Ga0062593_1000415272	3300004114	Soil	VRRLGDETVYTRTTRKALEAAGGAGELACALDRPLREVQDWLDGRAVPPDRVFMELLEIVSRRR*
Ga0063455_1002399021	3300004153	Soil	VAEETVYTRTTRKALEATGGAEPLAERLRCAREEVEAWLAGRRVPPDKAF
Ga0063455_1014686142	3300004153	Soil	VAEQTIYTRTTRKALEAVGGAEELAAALGRPLEEVNDWLAGREVPPDGAFLQLLEIVSRRP*
Ga0062589_1001630173	3300004156	Soil	VAEETIYMRTTRKALEAAGGAESLAHVLARPLAEIQDWLVGRVVPPDNTFLELLEIVSRRR*
Ga0066677_101715192	3300005171	Soil	VAEETVYMRTARKALEAVGGANALAEALGRPLAEIHDWLAGRQVPPDKAFLELLEIVSRRR*
Ga0066683_102531102	3300005172	Soil	LAEETVYMRTTRKALEASGGADTLAATLGRPLDQINDWLAGREVPPDRVFLELLEIVSRRR*
Ga0066673_101842802	3300005175	Soil	VAEETVYMRTTRKALEASGGSQQLAERLRRTRDEVNDWLAGRQVPPDPIFLEMLEIVSRRR*
Ga0066679_1000270010	3300005176	Soil	VAEDTIYMRTARKALEASGGADSLAAVLGRPLCEVNDWLAGREVPPDRVFLELLEIVSRRR*
Ga0066679_100056293	3300005176	Soil	VAEETVYMRTARKALEAAGGASELAERLCRTLEEVNDWLAGRQVPPDKAFLEMLEIASRRR*
Ga0066685_108092902	3300005180	Soil	VAEETVYMRTTRKALEASGGANSLAAVLGRPLDEINDWLAGREVPPDRVFLELLEIVSRRR*
Ga0066675_102275522	3300005187	Soil	VAEETVYMRTARKALEAAGGASELAERLSRTLEEVNDWLAGRQVPPDKAFLEMLEIASRRR*
Ga0066675_108027742	3300005187	Soil	VAQETVYTRTTRKALEALGGARELARALGRTLEDINDWLSGLQVPPDKVFLELLEIVSRRR*
Ga0070690_1000919573	3300005330	Switchgrass Rhizosphere	VAEETVYMRTTRKALEAAGGAESLARALARPLKDIQDWLAGRVVPPDHTFLDLLEIVSRRR*
Ga0070680_1003478002	3300005336	Corn Rhizosphere	VSDETVYMRTTRKALEAAGGAESLARLLARPLKDVQDWLAGRVVPPDRTFLDLLEIVSRRR*
Ga0070680_1007946101	3300005336	Corn Rhizosphere	VRRLGDETVYTRTTRKALEAAGGAGELACALGRPLREVQDWLDGRAVPPDRVFMELLEIVSRRR*
Ga0070705_1000099112	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MTGSGVADETVYTRTTRKALEAAGGLQQLAERLRRTLEEINDWLAGRQVPPDKIFLEMLEIVSRRR*
Ga0070708_1013044472	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VRRLGDETVYTRTTRKALEAVGGANELAAALRRPLEEVKDWLAGRQVPPDKAFLRLLEIVSRRG*
Ga0066686_107384352	3300005446	Soil	VAEETVYMRTTRKALEASGGAHSLAAVLGRPLDQINDWLAGREVPPDRVFLELLEIVSRRR*
Ga0068867_1022617811	3300005459	Miscanthus Rhizosphere	VAEETVYIRTTRKALEAAGGAESLARALARPLKDIQDWLAGRVVPPDHTFLDLLEIVSRRR*
Ga0070706_1004676202	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTGSGVADETVYTRTTRKALEAAGGLQQLAERLRRTLEEINDWLAGRQVPPDKIFLEMLEIVS
Ga0070698_1019437481	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VDDETVYMRTTRKALEAAGGAEPLARMMARPLPEIHDWLAGRVVPPDRAFLDLLEIVSR
Ga0070699_1000259002	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VAEETVYTRTTRKALEAVGGANELAAALRRPLEEVKDWLAGRQVPPDKAFLRLLEIVSRRG*
Ga0070699_1012602312	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	AAVDEETVYMRTARKALEAAGGAEPLARLMSCPLQEIQDWLAGRVVPPDRAFLDLLEIVSRRR*
Ga0070741_111848342	3300005529	Surface Soil	MSGGGAAEQTIYTRTMRKALEAVGGAAELAASLGRPLEQVNDWLAGREVPPDRVFLELLDIVSRRR*
Ga0070697_1017114072	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MGSGVADETVYTRTARKALEAAGGVPQLAARLCRPLDEVNDWLAGRQVPPDRIFL
Ga0070686_1001824931	3300005544	Switchgrass Rhizosphere	KALEAAGGAESLARALARPLKDIQDWLAGRVVPPDHTFLDLLEIVSRRR*
Ga0070686_1004557752	3300005544	Switchgrass Rhizosphere	MTGGWVAEQTIYTRTTRKALEAVGGAEELAATLGRPLEDVNDWLAGREVPPDGAFLELLEIVSRRR*
Ga0070695_1010665442	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MTGSRLAEQTVYTRTTRKALEAAGGVQQLAARLRRTLAEINDWLAGRQVPPDKIFLEMLEIVSRRR*
Ga0066707_109389271	3300005556	Soil	ESGVAEETVYMRTTRKALEASGGANSLAAVLGRPLDEINDWLAGREVPPDRVFLELLEIVSRRR*
Ga0066700_106617182	3300005559	Soil	RDHYKKSRVSRLPSLCRVSYTARRSTGKGGVAEDTIYMRTARKALEASGGADSLAAALGRPLCEVNDWLAGREVPPDRVFLELLEIVSRRR*
Ga0066670_105655042	3300005560	Soil	VAEETVYMRTARKALEAAGGAGELAERLSRTLEEVNDWLAGRQVPPDKAFLEMLEIASRRR*
Ga0066694_106048012	3300005574	Soil	VAEETVYMRTTRKALEASGGADTLAATLGRPLDQINDWLAGREVPPDRVFLELLEIVSRRR*
Ga0066691_102088403	3300005586	Soil	GGVAEDTIYMRTARKALEASGGADSLAAVLGRPLCEVNDWLAGREVPPDRVFLELLEIVSRRR*
Ga0066691_104022511	3300005586	Soil	LAEETVYMRTTRKALEASGGADTLAATLGRPLDQINDWLAGREVPPDRVFLEL
Ga0068859_1027895431	3300005617	Switchgrass Rhizosphere	RTTRKALEAAGGAGELACALDRPLREVQDWLDGRAVPPDRVFMELLEIVSRRR*
Ga0066696_104106531	3300006032	Soil	LAEETVYMRTTRKALEASGGADSLAATLGRPLDQVSDWLAGREVPPDRVFLELLEIVSRRR*
Ga0066652_1001959283	3300006046	Soil	VAEQTIYTRTTRKALEAVGGAEALAAALGRPLDEVNDWLAGREVPPDGAFLQLLEIVSRRR*
Ga0066652_1010287662	3300006046	Soil	VDDETVYMRTTRKALEAAGGAESLARMMALPMADIQDWLAGRVVPPDRAFLELLEIVSRRR*
Ga0079222_106451682	3300006755	Agricultural Soil	VAEETIYTRTTRKALEAAGGVKELAAALRRAADDVHAWLAGREIPPDQVFLDMLEIVSRRR*
Ga0079222_124636112	3300006755	Agricultural Soil	VADETVYMRTTRKALEAAGGADSLARALARPLKEVQDWLAGRVVPPDGAFLDLLEIVSRRR*
Ga0079222_125305292	3300006755	Agricultural Soil	MPGSGAADETVYMRTTRKALEATGGILQLAARLRCPQDEVHDWLAGRQVPPDPVFLEMLEIVSRRR*
Ga0079221_103412562	3300006804	Agricultural Soil	VAEETVYTRTTRKALEAAGGVKELAAALRRAVDEVHAWLAGREIPPGRAFLDMLEIVSRRR*
Ga0079220_117869962	3300006806	Agricultural Soil	VADETVYMRTTRKALEAAGGIPQLAARLRRPLDEVHDWLAGRQVPPDPVFLE
Ga0075433_118423802	3300006852	Populus Rhizosphere	LADETVYTRTTRKALEALGGGQQLAGRLRRTLEEVNDWLAGRRVPPDQAFLEMLEIVSRRR*
Ga0075425_1002328253	3300006854	Populus Rhizosphere	VAEETVYRRTTRKALEAIGGAHELASALGRPLEEINDWLAGREVPPDKAFLHLLEIVSRRR*
Ga0075434_1004678162	3300006871	Populus Rhizosphere	MGSGLADETVYTRTTRKALEALGGGQQLAGRLRRTLEEVNDWLAGRRVPPDQAFLEMLEIVSRRR*
Ga0075429_1019832912	3300006880	Populus Rhizosphere	VQETVYMRTTRKALEAAGGVEPLAQALSRPVTEIQEWLNGRVVPPDKAFLELLEVVSRRR
Ga0075424_1017284642	3300006904	Populus Rhizosphere	VAEETVYMRTTRKALEAAGGAESLARVLSRPLEDIHDWLAGRVVPPDRAFLELLEIVSRRR*
Ga0075435_1000147182	3300007076	Populus Rhizosphere	LAHETVYTRTTRKALEALGGGQQLAGRLRRTLEEVNDWLAGRRVPPDQAFLEMLEIVSRRR*
Ga0075435_1007450592	3300007076	Populus Rhizosphere	VAEETVYTRTTRKALEAAGGVKELAAALRRAVDEVHAWLAGREIPPDRAFLDMLEIVSRRR*
Ga0075435_1009362252	3300007076	Populus Rhizosphere	MGSGVADETVYTRTARKALEAAGGVPQLAARLRRTPDEVNDWLAGRQVPPDRIFLEMLEIVSRRR*
Ga0066709_1037780681	3300009137	Grasslands Soil	CAFRVSYTRRRMTGGRVAEQTIYTRTTRKALEAVGGAEALAAALGRPIEQVNEWLAGREVPPDAAFLQLLEIVSRRR*
Ga0114129_118521522	3300009147	Populus Rhizosphere	MGSGVADETVYTRTARKALEATGGVPQLAARLRRTPDEVNDWLAGRQVPPDRIFLEMLEIVSRRR*
Ga0126309_103759752	3300010039	Serpentine Soil	MRRVDEETVYMRTTRKALEAAGGAESLARVLSRPLQDIRDWLAGRVVPPDRAFLDLLEIVSRR
Ga0126384_115986312	3300010046	Tropical Forest Soil	VAEETVYTRTARKALEAAGGVPQLAARLRRTLDEVDDWVAGRQVPPDRIFLEMLEIVSRRR*
Ga0134124_127650302	3300010397	Terrestrial Soil	MTGGWVAEQTIYTRTTRKALEAEGGAEELAATLGRPLEDVNDWLAGREVPPDGAFLELLEIVSRRR*
Ga0134127_116713362	3300010399	Terrestrial Soil	MAEETVYSRTTRKALEAAGGLEALSSALGCPLAHVENWLAGSQVPPDNVFLQLLEIVSRRR*
Ga0134127_128676292	3300010399	Terrestrial Soil	MAEETVYSRTTRKALEAAGGLEALSDAVGCPLAEVERWLAGSQVPPDKVFLSLLEIVSRRR*
Ga0134122_102910551	3300010400	Terrestrial Soil	ALARLPATRRRVAEETVYMRTTRKALEAAGGAESLARALARPLKDIQDWLAGRVVPPDHTFLDLLEIVSRRR*
Ga0134123_108267681	3300010403	Terrestrial Soil	MRTTRKALEAAGGAESLARALARPLKDIQDWLAGRVVPPDHTFLDLLEIVSRRR*
Ga0134123_125381491	3300010403	Terrestrial Soil	LGDETVYTRTARKALEATGGAGQLARALGRPLQEVQDWLDGRSVPPDKVF
Ga0137399_100368013	3300012203	Vadose Zone Soil	MADETVYTRTTRKALEATGGAMQLAERLRRTLEEVNDWLAGRKVPPDKAFLEMLEIVSRRR*
Ga0137399_109302192	3300012203	Vadose Zone Soil	VAQETIYMRTARKALEASGGADSLAAVLGRPLGEVNDWLAGREVPPDRVFLELLEI
Ga0137399_115159392	3300012203	Vadose Zone Soil	VAEETVYTRTTRKALEAAGGALQLAERLRRTLEEVNDWLAGRQVPPDKAFLEMLEIVSRRR*
Ga0137362_115580182	3300012205	Vadose Zone Soil	VAQETIYMRTARKALEASGGADSLAAVLGRPLGEVNDWLAGREVPPDRVFLELLEIVSRRR*
Ga0150985_1008585382	3300012212	Avena Fatua Rhizosphere	MAGGWVAEQTIYTRTTRKALEAVGGAEALAATLGRPLEEVNGWLAGREVPPDGAFLELLEIVSRRR*
Ga0150985_1083103871	3300012212	Avena Fatua Rhizosphere	RVSYTRRRMTGGRVAEQTIYTRTTRKALEAVGGAEELAAALGRPLEEVNDWLAGREVPPDGAFLQLLEIVSRRR*
Ga0150985_1169061771	3300012212	Avena Fatua Rhizosphere	TVYMRTTRKALEAAGGAESLARLLATPLREIQDWLSGRAVPPDRTFLELLEVVSRRR*
Ga0150984_1051588622	3300012469	Avena Fatua Rhizosphere	MARGWVAEQTIYTRTTRKALEAVGGAEALAATLGRPLEEVNGWLAGREVPPDGAFLELLEIVSRRR*
Ga0137397_100688232	3300012685	Vadose Zone Soil	MSGSGVAEETVYTRTTRKALEAAGGTLELAARLYRTPDEVNYWLARRQVPPDRIFLEMLEIVSRRR*
Ga0137396_105755701	3300012918	Vadose Zone Soil	DETVYTRTTRKALEATGGAMQLAERLRRTLEEVNDWLAGRKVPPDKAFLEMLEIVSRRR*
Ga0137394_100415555	3300012922	Vadose Zone Soil	LAEETVYMRTTRKALEASGGADSLAAVLGRPLDEINDWLAGREVPPDRVFLELLEIVSRRR*
Ga0137359_100357195	3300012923	Vadose Zone Soil	MSGSGVAEETVYTRTTRKALEAAGGTLELAARLYRTPDEVNHWLAGRQVPPDRIFLEMLEIVSRRR*
Ga0137410_104410132	3300012944	Vadose Zone Soil	MSGSGVAEETVYTRTTRKALEAAGGTLELAARLHRTPDEVNDWLAGRQVPPDRIFLEMLEIVSRRR*
Ga0167653_10241483	3300015162	Glacier Forefield Soil	VAEETVYMRTARKALEAVGGADALAKALGRPLAEIDGWLAGREVPPDKAFLDLLEIVSRRR*
Ga0137409_101868103	3300015245	Vadose Zone Soil	KLVPMSGSGVAEETVYTRTTRKALEAAGGTLELAARLHRTPDEVNDWLAGRQVPPDRIFLEMLEIVSRRR*
Ga0134069_11148892	3300017654	Grasslands Soil	LAEETVYMRTTRKALEASGGAHSLAAVLGRPLDQINDWLAGREVPPDRVFLELLEIVSRR
Ga0066662_112867031	3300018468	Grasslands Soil	TGKPVAEETVYMRTARKALEAAGGASELAERLCRTLEEVNDWLAGRQVPPDKAFLEMLEIASRRR
Ga0066669_122416901	3300018482	Grasslands Soil	VADDTIYMRTTRKALEAAGGAESLALQLARPLAEIKDWLNGRVVPPDRAFLELLEIVSRR
Ga0196964_100092676	3300020202	Soil	QDTVYMRTTRKALEAAGGVESLARALSRPLDEVQDWLNGRAVPPDKAFLELLEIVSRRRL
Ga0196963_104334462	3300020215	Soil	AAAKFRGGGVQDTVYMRTTRKALEAAGGVESLARALSRPLDEVQDWLNGRAVPPDKAFLELLEIVSRRRLA
Ga0207685_108377902	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MGSGVADETVYTRTARKALEATGGVPQLAARLRRTPDEVNDWLAGRQVPPDRIFLEMLEIVSRRR
Ga0207707_1001222611	3300025912	Corn Rhizosphere	VSDETVYMRTTRKALEAAGGAESLARLLARPLKDVQDWLAGRVVPPDRTFLDLLEIVSRR
Ga0207660_106474571	3300025917	Corn Rhizosphere	VRRLGDETVYTRTTRKALEAAGGAGELACALGRPLREVQDWLDGRAVPPDRVFMELLEIVSRRR
Ga0207662_105114662	3300025918	Switchgrass Rhizosphere	VAEETIYMRTTRKALEAAGGAESLAHVLARPLAEIQDWLVGRVVPPDNTFLELLEIVSRR
Ga0207670_111417771	3300025936	Switchgrass Rhizosphere	VTEETIYMRTTRKALEAAGGAESLAHVLARPLAEIQDWLVGRVVPPDNTFLELLEIVSRR
Ga0209237_10517283	3300026297	Grasslands Soil	LAEETVYMRTTRKALEASGGAHSLAAVLGRPLDDINDWLAGREVPPDRVFLELLEIVSRR
Ga0209240_10326163	3300026304	Grasslands Soil	VAEETVYMRTARKALEAVGGADALAAALGRPLAEVHDWLAGREVPPDRAFLELLEIVSRR
Ga0209055_10177232	3300026309	Soil	VAEETVYMRTARKALEAAGGASELAERLCRTLEEVNDWLAGRQVPPDKAFLEMLEIASRR
Ga0209647_100115219	3300026319	Grasslands Soil	VAEETVYTRTARKALEAVGGADALAAALGRPLAEVHDWLAGREVPPDRAFLELLEIVSRR
Ga0209152_102078012	3300026325	Soil	MTGGRVAEQTIYTRTTRKALEAVGGAEALAAALGRPIEQVNEWLAGREVPPDAAFLQLLEIVSRRR
Ga0209152_104289382	3300026325	Soil	VAQETVYTRTTRKALEALGGARELARALGRTLEDINDWLSGLQVPPDKVFLELLEIVSRR
Ga0209801_11559312	3300026326	Soil	VAEETVYMRTTRKALEASGGANSLAAVLGRPLDEINDWLAGREVPPDRVFLELLEIVSRR
Ga0209057_10090674	3300026342	Soil	VAEETVYMRTARKALEAAGGAGELAERLSRTLEEVNDWLAGRQVPPDKAFLEMLEIASRR
Ga0209059_11512421	3300026527	Soil	HYKKSTVLRLACACRVSYTRRRTTGKPVAEETVYMRTARKALEAAGGASELAERLCRTLEEVNDWLAGRQVPPDKAFLEMLEIASRRR
Ga0209805_11342313	3300026542	Soil	VAEETVYMRTARKALEAVGGANALAEALGRPLAEIHDWLAGRQVPPDKAFLELLEIVSRR
Ga0209156_104069572	3300026547	Soil	VAEETVYMRTARKALEAAGGASELAERLSRTLEEVNDWLAGRQVPPDKAFLEMLEIASRR
Ga0209474_105665282	3300026550	Soil	VAEETVYRRTTRKALEAIGGAKELASALGRPLEEINDWLAGREVPPDKAFLHLLEIVSRR
Ga0209178_14165832	3300027725	Agricultural Soil	VAEETVYTRTTRKALEAAGGVKELAAALRRAVDEVHAWLAGREIPPGRAFLDMLEIVSRR
Ga0137415_108851342	3300028536	Vadose Zone Soil	GRVSYTPRRSTGKGGVAEETIYMRTARKALEASGGAGSLAAVLGRPLGEVNDWLAGREVPPDRVFLELLEIVSRRR
Ga0307506_102129002	3300031366	Soil	MAGGWVAEQTIYTRTTRKALEAVGGAEALAATLGRPLDEVNGWLAGREVPPDGAFLELLEIVSRRR
Ga0307408_1024567822	3300031548	Rhizosphere	VDEETVYMRTTRKALEAAGGAESLARMLARPLQEITDWLAGRVVPPDRAFLDLLEIVSRR
Ga0310813_109259362	3300031716	Soil	VADETVFTRTTRKALEAAGGALELAEILGCPLADVQDWLAGRAMPPDRVFLQLLEILSRR
Ga0307469_101719993	3300031720	Hardwood Forest Soil	MGSGVADETVYTRTARKALEAAGGVPQLAARLRRTPDEVNDWLAGRQVPPDRIFLEMLEIVSRRR
Ga0310892_111504732	3300031858	Soil	VAEETVYMRTTRKALEAAGGAESLARALARPLKDIQDWLAGRVVPPDHSFLDLLEIVSRR
Ga0307412_115385982	3300031911	Rhizosphere	VDGETVYMRTTRKALEAAGGAESLARMLARPLQEITDWLAGRVVPPDRAFLDLLEIVSRR
Ga0308175_1011028682	3300031938	Soil	VAEQTVYMRTTRKALEAVGGAESLARLLATPLQEIHDWLAGRVVPPDRTFLDLLEIVSRR
Ga0307416_1033748942	3300032002	Rhizosphere	MRTTRKALEAAGGMEPLAQALSRPVSEIHAWLNGRVVPPDKAFLELLEVVSRRR
Ga0310895_105204661	3300032122	Soil	VAEETIYMRTTRKALEAAGGAESLAHVLARPLAEIQDWLVGRVVPPDNTFLELLEIVS
Ga0307471_1018883872	3300032180	Hardwood Forest Soil	VAEETVYMRTTRKAAEASGGTEPLAARLGLTLDEINDWLAGRVVPPDRAFLELLEIVSRR
Ga0310896_101460182	3300032211	Soil	VAEETVYMRTTRKALEAAGGAESLARALARPLKDIQDWLAGRVVPPDHTFLDLLEIVSRR
Ga0310810_110002472	3300033412	Soil	LGDETVYTRTTRKALEAAGGAGELACALDRPLREVQDWLDGRAVPPDRVFMELLEIVSRR
Ga0247829_110646121	3300033550	Soil	VAEETIYMRTTRKALEAAGGAESLAHVLARPLAEIQDWLVGRVVPPDNTFLELLE
Ga0372943_0167342_1081_1266	3300034268	Soil	VAEETVYMRTTRKALEAAGGSESLARRLARPAQEIGDWLAGRAVPPDPVFLELLEIVSRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F061757

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences