Metagenome / Metatranscriptome Family F061831

Basic Information
Family ID	F061831
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	59 residues
Representative Sequence	YPWYAFNGTSSAFTYGADYPGTQFDYGQATQFATTTQCGGPFGTDSTYCDTVLTPTP
Number of Associated Samples	99
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	17.50 %
% of genes near scaffold ends (potentially truncated)	25.19 %
% of genes from short scaffolds (< 2000 bps)	26.72 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Most Common Taxonomy
Group	Unclassified (74.809 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.481 % of family members)
Environment Ontology (ENVO)	Unclassified (35.115 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.382 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 3.53% β-sheet: 16.47% Coil/Unstructured: 80.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF00211	Guanylate_cyc	5.34
PF00732	GMC_oxred_N	3.82
PF02151	UVR	3.82
PF02861	Clp_N	3.82
PF03795	YCII	2.29
PF01904	DUF72	2.29
PF04185	Phosphoesterase	2.29
PF08281	Sigma70_r4_2	1.53
PF00282	Pyridoxal_deC	1.53
PF00296	Bac_luciferase	1.53
PF08843	AbiEii	0.76
PF08223	PaaX_C	0.76
PF13847	Methyltransf_31	0.76
PF14417	MEDS	0.76
PF01569	PAP2	0.76
PF02525	Flavodoxin_2	0.76
PF06742	DUF1214	0.76
PF00903	Glyoxalase	0.76
PF01641	SelR	0.76
PF00230	MIP	0.76
PF14333	DUF4389	0.76
PF09335	SNARE_assoc	0.76
PF00378	ECH_1	0.76
PF13784	Fic_N	0.76
PF07969	Amidohydro_3	0.76
PF00248	Aldo_ket_red	0.76
PF01027	Bax1-I	0.76
PF11774	Lsr2	0.76
PF08241	Methyltransf_11	0.76
PF02012	BNR	0.76
PF13622	4HBT_3	0.76
PF03009	GDPD	0.76
PF03358	FMN_red	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	5.34
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	3.82
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	3.82
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	2.29
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	2.29
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	2.29
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	1.53
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.53
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	0.76
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.76
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	0.76
COG0584	Glycerophosphoryl diester phosphodiesterase	Lipid transport and metabolism [I]	0.76
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.76
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.76
COG2253	Predicted nucleotidyltransferase component of viral defense system	Defense mechanisms [V]	0.76
COG3327	DNA-binding transcriptional regulator PaaX (phenylacetic acid degradation)	Transcription [K]	0.76
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.76
COG5402	Uncharacterized protein, contains DUF1214 domain	Function unknown [S]	0.76

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.81 %
All Organisms	root	All Organisms	25.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.81 %
cellular organisms	root	All Organisms → cellular organisms	25.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.81 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	25.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.81 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	22.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.81 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	22.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.81 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	21.37 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.81 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	17.56 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.53 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.76 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	17.56 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	1.53 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.76 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	17.56 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	1.53 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.76 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	17.56 %
Nocardia wallacei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia wallacei	1.53 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.76 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	17.56 %
Nocardia wallacei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia wallacei	1.53 %
Streptomyces sp. alain-838	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. alain-838	0.76 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002906\|JGI25614J43888_10155326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	611	Open in IMG/M
3300005332\|Ga0066388_101387338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1219	Open in IMG/M
3300005435\|Ga0070714_102128865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300005536\|Ga0070697_101731720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300005995\|Ga0066790_10305263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	679	Open in IMG/M
3300009792\|Ga0126374_11251145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	597	Open in IMG/M
3300010360\|Ga0126372_10147654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1873	Open in IMG/M
3300010361\|Ga0126378_11998011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	661	Open in IMG/M
3300010376\|Ga0126381_100167707	Not Available	2903	Open in IMG/M
3300010376\|Ga0126381_100872975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1294	Open in IMG/M
3300010376\|Ga0126381_101637676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	930	Open in IMG/M
3300011270\|Ga0137391_11391706	Not Available	548	Open in IMG/M
3300012096\|Ga0137389_10378097	Not Available	1208	Open in IMG/M
3300012201\|Ga0137365_10112689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2046	Open in IMG/M
3300018060\|Ga0187765_10582992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	720	Open in IMG/M
3300020583\|Ga0210401_10676823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	892	Open in IMG/M
3300021560\|Ga0126371_11725611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	749	Open in IMG/M
3300025928\|Ga0207700_10064600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2788	Open in IMG/M
3300027109\|Ga0208603_1002612	Not Available	2990	Open in IMG/M
3300030970\|Ga0075381_10558901	Not Available	624	Open in IMG/M
3300031057\|Ga0170834_110833562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	646	Open in IMG/M
3300031231\|Ga0170824_116797949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	667	Open in IMG/M
3300031543\|Ga0318516_10288595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia wallacei	948	Open in IMG/M
3300031544\|Ga0318534_10630974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. alain-838	608	Open in IMG/M
3300031561\|Ga0318528_10378326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	760	Open in IMG/M
3300031564\|Ga0318573_10489383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300031572\|Ga0318515_10082464	All Organisms → cellular organisms → Bacteria	1668	Open in IMG/M
3300031573\|Ga0310915_10215441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1345	Open in IMG/M
3300031713\|Ga0318496_10210348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia wallacei	1070	Open in IMG/M
3300031770\|Ga0318521_10108274	All Organisms → cellular organisms → Bacteria	1539	Open in IMG/M
3300031778\|Ga0318498_10433176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	583	Open in IMG/M
3300031798\|Ga0318523_10024653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2664	Open in IMG/M
3300031821\|Ga0318567_10667937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	590	Open in IMG/M
3300031880\|Ga0318544_10307094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	616	Open in IMG/M
3300032008\|Ga0318562_10890271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300032043\|Ga0318556_10467964	Not Available	659	Open in IMG/M
3300032067\|Ga0318524_10207757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1002	Open in IMG/M
3300032089\|Ga0318525_10192445	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300032261\|Ga0306920_101529193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	952	Open in IMG/M
3300033486\|Ga0316624_11608247	Not Available	599	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.24%
Host-Associated	Host-Associated	0.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.95%
Aquatic	Environmental → Aquatic	2.29%
Plants	Host-Associated → Plants	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.95%
Freshwater	Environmental → Aquatic → Freshwater	0.76%
Marine	Environmental → Aquatic → Marine	0.76%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.34%
Loam	Environmental → Terrestrial → Soil → Loam	16.79%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.82%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.76%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.76%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	38.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.40%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.05%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.53%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.76%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.76%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.76%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.76%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	22.90%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.53%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.53%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.76%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.76%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300004063	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLB_D2	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013059	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022714	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027076	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF012 (SPAdes)	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300030970	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB1 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25614J43888_101553262	3300002906	Grasslands Soil	SNGGAFCTYPWYAFNGTAKAFTYGADYPGTQFNYGQSAQFATTPQCGGPFGPDTTFCDTVLSPTP*
Ga0055483_103355421	3300004063	Natural And Restored Wetlands	IYPWYAFNSSDSAYTYGVNYAGTKFDYGQASQFAPTPQCDGPFGTDTTYCDTVLHPSP*
Ga0066395_103422991	3300004633	Tropical Forest Soil	GKAGALTYGANYPGTKFDYGKAHQFPTTPKCGGPFGPNSTFCATIIKPVPLGNHR*
Ga0066388_1013873382	3300005332	Tropical Forest Soil	VLTAGTWSYCTYLWFALNGTDSAFTHGADYPGTQFDYGQAAQFATTVQCGGPFGTDSTYCDTVISPTP*
Ga0066388_1023335552	3300005332	Tropical Forest Soil	AFSYGADYPGTKFDYGMADQFQQTLNCGGPFGPDSTYCDTVLKPTP*
Ga0066388_1023548752	3300005332	Tropical Forest Soil	LGLDRSAFTYGADYPGTKFDYGQAGQFATTMQCGRPFDPNSTYCDSVLNPTP*
Ga0066388_1078563512	3300005332	Tropical Forest Soil	PWFAGGTNHTITYGADYRGTTHGYGGSQGAQFATTPLCGGPFGPDSTFCDRVLTPSP*
Ga0070714_1021288651	3300005435	Agricultural Soil	GGPYCTYPWYASNSAYGAITYGADYPGTKSDYGQGSQFPVTMQCGGPYGPDSTYCDTVLKPPPL*
Ga0070708_1017778091	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	DNAFTYGADYPGTSFDYGQAGQFALTTACGGPFGPNTTYCDTVLKPTP*
Ga0070706_1014353901	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	PSTADNAFTYGADYPGTKFDYGQATQFATTPLCGGPFGPDSTFCDTVLSPTP*
Ga0070707_1009810601	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	PWYAFNGTDSAFTYGADYPGTTYNYGRAGQFATTTQCGGPFGPDSTYCDTVLSPTP*
Ga0070707_1018574851	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	FCIYPWFTFNGTNNAFSYGANYPGTKFAYGEADQFQQTLNCGGPFGPDSTYCDTVLNPTP
Ga0070697_1017317201	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	PYCTYPWYAFNRTGAAFTYGADYPGTQFDYGQAAQFATTTQCGGPFGPDSTYCDTSLTPTP*
Ga0070697_1020873572	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	AFNGTDNAFSYGADYPGTKFDYNQADQFAQTMQCGGPFGPDSTYCDTVLNPTP*
Ga0066903_1002486951	3300005764	Tropical Forest Soil	ALTYGANYPGTRFDYGQADQFPTTPQCGGPFGPGSTYCAAIIKPVPLGNSH*
Ga0066903_1017618502	3300005764	Tropical Forest Soil	NKADSAFTFGAGYPGTQFNYGQSAQFATTPQCGGPFGPDSTFCDTVLKPTP*
Ga0066903_1037914591	3300005764	Tropical Forest Soil	GADYPGTQFDYGQAAQFATTMQCGGPFGPDSTYCDTPLTPTP*
Ga0066790_103052631	3300005995	Soil	SYGGPFCIYPWYAFNGKADALTYGADYPGTRFDYGKANQFATTPLCGGRFGAGSTYCVTIIKPVPLGNSH*
Ga0070717_107297393	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	FTYGADYPGTQFDYGQAAQFATTTQCGGPFGPDSTYCDTSLTPTP*
Ga0066656_110167241	3300006034	Soil	CIYPWYAFNGKADALTYGADYPGTRFNYGQANQFATTPQCGGPFGPDSTYCVTIIKPVPLGNSH*
Ga0074051_100034811	3300006572	Soil	YPWYAFNGKAGALTYGADYPGTRFNYGQANQFATTTQCGGPFGADSTYCDTGIKPVPLRKSH*
Ga0074059_114325971	3300006578	Soil	NGYGGPFCIYPWYAFNGKADALTYGADYPGTRFDYGKANQFATTPLCGGPFGPNSTYCVTIIKPVPLGR*
Ga0079220_106311873	3300006806	Agricultural Soil	YGGPFCIYPWYAFNGKADALTYGANYPGTRFDYGKANQFATTPLCGGPFGPNSTYCVTIIKPVPLGH*
Ga0073928_110025971	3300006893	Iron-Sulfur Acid Spring	PYCTYPWYAFNSDASAITFGADYPGTKFDYGQGSQYATTPLCGGPFGPDSTYCDTVLTPTP*
Ga0126374_112511451	3300009792	Tropical Forest Soil	MRNATCPVYGGPFCTYPWYAFNKADSAITYGADYPGTQFDYGQAAQFATTPQCGGPFGPNSTFCDTVLKPTPPVH*
Ga0126380_111149932	3300010043	Tropical Forest Soil	FNGRGGALTYGANYTGTRFDYGKADQFATTPQCGGPFGPDSTYCVTIIEPVPLGGSH*
Ga0126382_103243512	3300010047	Tropical Forest Soil	VVRVQREGRRLTYGANYPGTRFDYGKANQFATTPLCGGPFGPNSTYCATIIKPVPLGNSH
Ga0126373_102201201	3300010048	Tropical Forest Soil	GALTYGADYPGTRFNYGRANQFVTTPQCGGPFGPDSTYCVTIIKPVPLGNSH*
Ga0126373_104436913	3300010048	Tropical Forest Soil	DYPGTKFAYGQGSQYATTPQCGGPFGPDSTFCDTVLTPTP*
Ga0126373_130509381	3300010048	Tropical Forest Soil	GADYPGTKFDYGQANQFTTTPLCGGPFGADSTFCDTTLSPVP*
Ga0126370_101007471	3300010358	Tropical Forest Soil	NAFSYGADYPGTKFDYNMADQFQQTLNCGGPFGPNSTYCDTVLKPTP*
Ga0126376_110316481	3300010359	Tropical Forest Soil	YPGTKFDYNMADQFQQTLNCGGPFGPNSTYCDTVLKPTP*
Ga0126372_101476542	3300010360	Tropical Forest Soil	VLTAGTWSYCTYPWFALNGTDSAFTHGADYPGTQFDYGQAAQFATTVQCGGPFGTDSTYCDTVISPTP*
Ga0126372_126339771	3300010360	Tropical Forest Soil	NGTNNAFAYGANYPGTKFDYNMADQFQQTLNCGGPFGPNSTYCDTVLKPTP*
Ga0126378_103963931	3300010361	Tropical Forest Soil	PWYAFNGRAGALTYGADYPGTRFNYGRANQFVTTPQCGGPFGPDSTYCVTIIKPVPLGNSR*
Ga0126378_119980112	3300010361	Tropical Forest Soil	AYGGPFCTYPWFALNSNAKAFTFGADYPGTPHDYGQGFQFATTPQCGGPFGPDSTFCDTTLSPVP*
Ga0126378_133879672	3300010361	Tropical Forest Soil	WFTFNGTNDAFSYGADYPGTKFNYGQADQFQQTLNCGGPFGPDSTYCDTVLKPTP*
Ga0126377_106952692	3300010362	Tropical Forest Soil	GGPFCIYPWYAFNGRADALTYGANYPGTKFDYGKANQFATTPLCGGPFGPSSTYCATTIKPVPLGNSR*
Ga0126379_107241801	3300010366	Tropical Forest Soil	GSNSAFSYGADYPGTTHNYGQADQFQQTLKCGGPFGANTTYCDTVLSPTP*
Ga0126381_10000798912	3300010376	Tropical Forest Soil	FTQNGTGTDSAFSFGADYPGTKNDYGQADQFQQAPLCGGPFGPDSTFCDTVIVP*
Ga0126381_10001254310	3300010376	Tropical Forest Soil	TYPWYALNSNGKAFTYGGDYPGTKFDYGQGFQFATIPLCGGPFGPDSTFCDTTLSPVP*
Ga0126381_1001677074	3300010376	Tropical Forest Soil	CSSYGGPFCTYPWFAFNGTDKAFSYGADYPGTQFDYGKAAQFALTTQCGGPFGPNSTYCDTPLSPTP*
Ga0126381_1007804811	3300010376	Tropical Forest Soil	DSAFSFGADYPGTKNDYGQADQFQQAPLCGGPFGPDSTFCDTVIVP*
Ga0126381_1008729753	3300010376	Tropical Forest Soil	CPTYGGPFCTYPWYALNSNGKAFTYGADYPGTKFDYNQGFQFASTPQCGGPFGPDSTFCDTALSPVP*
Ga0126381_1008758082	3300010376	Tropical Forest Soil	YPWYALNKADSAFTFGAGYPGTQFNYGQSAQFATTPQCGGPFGPDSTFCDTVLKPTP*
Ga0126381_1014036961	3300010376	Tropical Forest Soil	YPWFAFNGTDKAFSYGADYPGTQFDYGKAAQFALTTQCGGPFGPNSTYCDTVLSPTP*
Ga0126381_1016376761	3300010376	Tropical Forest Soil	TATCANYGGAFCTYPWYTFNGKDRAFAFGADYPATKFDYGQASQFATKQLCGGPFGPDSTFCDTVLSPTP*
Ga0126381_1021285682	3300010376	Tropical Forest Soil	YCIYPWYAFNGKAHALTYGANYPGTKFDYGKAHQFPTTPKCGGPFGPNSTFCATIIKPVPLGNHR*
Ga0126383_113035962	3300010398	Tropical Forest Soil	FCIYPWFTLNGTNNAFSYGANYPGTSFDYGQADQFQQTLKCGGPFGPDSTYCDTVLNPTP
Ga0126383_127725842	3300010398	Tropical Forest Soil	QAFSFGADYPGTKFDYGKAAQFATAPLCGGPFGPDSTFCDTVLSPTP*
Ga0137391_113917061	3300011270	Vadose Zone Soil	QYCPSYGGPYCSYPWYAFNGTSSAFTYGADYPGTRFDYHKASQFATMPQCGGPFGPDSTFCDAVLQTTP*
Ga0137393_110269771	3300011271	Vadose Zone Soil	AAFTYGADYPGTQFDYGQAAQFATTTQCGGPFGPNSTYCDTVLSPTP*
Ga0137389_103780972	3300012096	Vadose Zone Soil	GPFCTYPWYAVNKAASAFTYGADYPGTQFDYGQAAQFATTPQCGGPFGPDSTFCDTVLKPTPPIG*
Ga0137388_111661763	3300012189	Vadose Zone Soil	ANAFTFGANYPGTKFDYGQGSQFTTTPQCGGPFGADSTFCDTVLNPTP*
Ga0137365_101126892	3300012201	Vadose Zone Soil	VNQYCSTYGGPFCIYPWYAFNGTDNAFTYGADYPGTSFDYGQAGQFALTTGCGGPFGPDTTYCDKS*
Ga0137363_109518252	3300012202	Vadose Zone Soil	YGADYPGTKFDYNQADQFAQTMQCGGPFGPDSTYCDTLLKPTP*
Ga0137376_102447833	3300012208	Vadose Zone Soil	IYPWYAFNGKAGALTYGADYPGTRFDYGKANQFATTPQCGGPFGPDSTYCVTIIKPVPLGH*
Ga0137378_115754822	3300012210	Vadose Zone Soil	YCIYPWFAFNGTDNAFTYGADYQGTKFDYNQADQFAQTMQCGGPFRPASTYCDTVLKATP
Ga0137377_117497491	3300012211	Vadose Zone Soil	FNGKADALTYGADYPGTRFDYGKANQFATTPLCGGPFGPNSTYCVTIIKPVPLGH*
Ga0137386_101609804	3300012351	Vadose Zone Soil	VDGSASAFTYGAHYPGTQFDYGQASQFATTRQCGGPFGPDSTYCDTVLNPTP*
Ga0164306_101279871	3300012988	Soil	CIYPWYAFNGKADALTYGADYPGTRFDYGKANQFATTPLCGGPFGPNSTYCVTIIKPVPLGR*
Ga0154012_1654261	3300013059	Corn, Switchgrass And Miscanthus Rhizosphere	GPFCTYPWYALNSKAFTYGADYPGTKFDYGQGFQFATTPLCGGPFGPDSTFCDTTLTPVP
Ga0157369_108896511	3300013105	Corn Rhizosphere	TYPWYALNSKAFTYGADYPGTKFDYGQGFQFATTPLCGGPFGPDSTFCDTTLTPVP*
Ga0137412_112671811	3300015242	Vadose Zone Soil	YAFNGTSAAFTYGADYPGTQFDYGQAAQFATTTQCGGPFGPNSTYCDTVLNPTP*
Ga0182036_105265401	3300016270	Soil	PYCIYPWYALNAKGSAFTYGIDYTGTKFDYGQGSQFATTTQCGGPFGPSTTYCDTVINPS
Ga0182032_113905551	3300016357	Soil	PWYAFNGTAKAFTYGADYPGTQFDYEQSAQFATTPQCGGPFGLDSTFCDTVLSPTP
Ga0182032_115469381	3300016357	Soil	DHGFTYGADYPGTQFDYGKAAQFATTPQCGGPFGPESTFCDTVLSPVP
Ga0182037_112197991	3300016404	Soil	WYALNAKGSAFTYGIDYTGTKFDYGQGSQFATTTQCGGPFGPSTTYCDTVINPSN
Ga0187777_110037141	3300017974	Tropical Peatland	NGKARALTYGANYPGTRFDYGKAHQFATTPLCGGPFGPDSTYCDTIIRPVPLGHHQ
Ga0187805_105193942	3300018007	Freshwater Sediment	VTYRGDYPGTKFDYGGPQGSQFATTPLCGGPFGADSTYCDTVLTPSPPLS
Ga0187765_105829922	3300018060	Tropical Peatland	SSYGGPFCIYPWYAFNGKAGALTYGANYPGTRFDYGKANQFATTPLCGGPFGPDSTYCVTVIKPVPLGHRHW
Ga0137408_13711922	3300019789	Vadose Zone Soil	PWYAFSGTDSAFTYGADYPGTAFDYGQGAQFATTPLCGGPFGPDSTFCDTVLRPVP
Ga0210399_101264244	3300020581	Soil	TSYGGPFCIYPWYAFNGKADALTYGADYPGTRFDYGKANQFATTPLCGGPFGPNSTYCVTIIKPVPLGR
Ga0210401_106768233	3300020583	Soil	SSYGGPYCTYPWYAFNSDASAITFGADYPGTKFDYGQGSQYATRPLCGGPFGPDSTYCDTVLTPTP
Ga0210383_103557393	3300021407	Soil	WYAFNSDASAVTFGADYPGTKFDYGQGSQYATTPLCGGPFGPDSTYCDTVLTPTP
Ga0210391_102294222	3300021433	Soil	SAFSAITFGADYPGTKFDYKQGSQFPATMQCGGPYGPDSTYCDTVLKPSPLS
Ga0126371_117256111	3300021560	Tropical Forest Soil	NSAYGAITFGADHPGTKSSYGQGAQFPATMQCGGPYGPDSTHCDAVRKPQPLP
Ga0126371_123199812	3300021560	Tropical Forest Soil	FNGRAGALTYGADYPGTRFNYGRANQFVTTPQCGGPFGSDSTYCVTIIKPVPLGNSH
Ga0126371_129328772	3300021560	Tropical Forest Soil	YAYNSGATALTYGGDYPSTKFDYGQGSQFATTPLCGGPFGADSTFCDTVLTPSPPLK
Ga0126371_131301712	3300021560	Tropical Forest Soil	WFTFNGTNNAFAYGADYPGTKFDYNMADQFQQTLNCGGPFGPDSTYCDTVLKPTP
Ga0242671_10177263	3300022714	Soil	AANSAYSAITFGADYPGTKFDYKQGSQFPTTMQCGGPYGPDSTYCDAVLKPSPLS
Ga0207684_113074971	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	PSTADNAFTYGADYPGTKFDYGQATQFATTPLCGGPFGPDSTFCDTVLSPTP
Ga0207700_100133766	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	YPWYAFNGTSSAFTYGADYPGTQFDYGQATQFATTTQCGGPFGTDSTYCDTVLTPTP
Ga0207700_100646003	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	YGGPYCTYPWYAFNGTTSAFTYGADYPGTQFDYGQAAQFATTPQCGGPFGPDSTYCDTVLSPSP
Ga0208860_10217161	3300027076	Forest Soil	NSDASAITFGADYPGTKFDYGQGSQYVTTPLCGGPFGPDSTYCDTVLTPTP
Ga0208603_10026121	3300027109	Forest Soil	SCSSYGGPYCTYPWYAFNSDASAITFGADYPGTKFDYGQGSQYVTTPLCGGPFGPDSTYCDTVLTPTP
Ga0209465_104514312	3300027874	Tropical Forest Soil	ALTYGANYPGTKFDYGKAHQFPTTPKCGGPFGPNSTFCATIIKPVPLGDHH
Ga0209415_105211673	3300027905	Peatlands Soil	YPWYAANSTDNAITFGADYPGTKFDYGQGFQYATTPLCGGPFGADSTYCDTVLTPAP
Ga0075381_105589012	3300030970	Soil	SSYGGAFCTYPWFAFNGTDRAFTYGAYYPGTQFDYGKAAQFALTTQCGGPFGPDSTYCDTVLSPTP
Ga0170834_1108335622	3300031057	Forest Soil	DTGGEAEVLGNSFVGPTDCPGYGGPFCTYPWYAAAKSGAITYGADYPGTIHDYGQGLQFATAPQCGGPFGPDSTYCDNVLTPAP
Ga0170823_109103622	3300031128	Forest Soil	PWFAFNGTDKAFTYGADYPGTQFDYGKAAQFALTTQCGGPFGPDSTYCDTVLSPTP
Ga0170824_1167979491	3300031231	Forest Soil	ANGGPFCTYPWYAAAKSGAITYGADYPGTIHDYGQGLQFATAPQCGGPFGPDSTYCDNVLTPAP
Ga0170818_1054110691	3300031474	Forest Soil	DKAFTYGADYPGTQFDYGQSAQFAITPQCGGPFGPDTTLCDTVLSPTP
Ga0318516_102885952	3300031543	Soil	VNATCPAFGGPFCTYPWYTFNKADGAFTYGANYPGTQFQYGQAAQFATTMQCGGPFGPDSTFCDTVLKPTP
Ga0318534_106309741	3300031544	Soil	FVGPTDCSSSGGPFCTYPWFAFNGTSSAFTYGADYPGTKFDYGQAAQFATTMQCGGPFGPDSTYCDTVISPTP
Ga0318534_106853842	3300031544	Soil	IYPWFAFNGVDNAFTYGADYPGTKFDYNQADQFAQTLQCGGPFGPGSTYCDTVLKLTP
Ga0318528_101692582	3300031561	Soil	ALTYGANYPGTKFDYGKANQFQTTPQCGGPFGPNSTFCVTIIKPVPLGNHH
Ga0318528_103783261	3300031561	Soil	NATCPAYGGPFCTYPWYAFNKIDGAFTFGADYPGTQFDYGQAAQLATTPQCGGPFGPDTTFCDTVLKPTPPLR
Ga0318573_104893831	3300031564	Soil	VAASCASYGGPYCTYPWYAFNSDGAFTFGADYQGTKFDYGQGSQYATTPLCGGPFGADSTYCDTALNPTP
Ga0318515_100824642	3300031572	Soil	VNATCPAYGGPFCTYPWYAFNKADGAFTYGANYPGTQFQYGQAAQFATTMQCGGPFGPDSTFCDTVLKPTP
Ga0310915_102154411	3300031573	Soil	EVNATCPAYGGPFCTYPWYAFNKIDGAFTFGADYPGTQFDYGQAAQLATTPQCGGPFGPDTTFCDTVLKPTPPLR
Ga0318555_106241822	3300031640	Soil	LTYGGDYPGTQRKFDYGQGSQFAVTPLCGGPFGGDSTYCDTVLSPSPPLQ
Ga0318542_103332932	3300031668	Soil	GSYGGPYCIYPWYALNAKGSAFTYGIDYTGTKFDYGQGSQFATTTQCGGPFGPSTTYCDTVINPSN
Ga0318496_102103481	3300031713	Soil	AYGGPFCTYPWYTFNKADGAFTYGANYPGTQFQYGQAAQFATTMQCGGPFGPDSTFCDTVLKPTP
Ga0306918_104158651	3300031744	Soil	FNKTDHGFTYGADYPGTQFDYGKAAQFATTPQCGGPFGPESTFCDTVLSPVP
Ga0318554_106519682	3300031765	Soil	GGPYCIYPWYALNAKGSAFTYGIDYTGTKFDYGQGSQFATTTQCGGPFGPSTTYCDTVINPSN
Ga0318521_101082743	3300031770	Soil	FCTYPWYAFNKIDGAFTFGADYPGTQFDYGQAAQLATTPQCGGPFGPDTTFCDTVLKPTPPLR
Ga0318543_100252425	3300031777	Soil	MRYAFNGRAHALTYGANYPGTKFDYGKANQFQTTPQCGGPFGPNSTFCVTIIKPVPLGNH
Ga0318498_104331761	3300031778	Soil	MAVNQYCASYGGPYCIYPWFAFNGVDNAFTYGADYPGTKFDYNQADQFAQTLQCGGPFGPGSTYCDTVLKPTP
Ga0318557_103218741	3300031795	Soil	PWYAFNKTDHGFTYGADYPGTQFDYGKAAQFATTPQCGGPFGPESTFCDTVLSPVP
Ga0318523_100246531	3300031798	Soil	TYPWYTFNKADGAFTYGANYPGTQFQYGQAAQFATTMQCGGPFGPDSTFCDTVLKPTP
Ga0318497_107179461	3300031805	Soil	YPWYAFNKADHGFTYGADYPGTQFDYRQAAQFATTPQCGGPFGPDTTFCDTVLSPVP
Ga0318567_106679372	3300031821	Soil	YGGPFCTYPWYAFNKADHGFTYGADYPGTQFDYGQAAQFATTPQCGGPFGPDTTFCDTVLSPVP
Ga0318544_103070941	3300031880	Soil	VNATCPVYGGPFCTYPWYAFNKTDHGFTYGADYPGTQFDYGKAAQFATTPQCGGPFGPESTFCDTVLSPVP
Ga0306925_115148141	3300031890	Soil	ADCGSYGGPYCIYPWYALNAKGSAFTYGIDYTGTKFDYGQGSQFANPTQCGGPFGPSTTYCDTVINPSN
Ga0310910_107792732	3300031946	Soil	GPFCTYPWFAFNGTGSAFTYGADYPGTKFDYGQAAQFATTMQCGGPFGPDSTYCDTVISPTP
Ga0306922_101802631	3300032001	Soil	GSAFTYGIDYTGTKFDYGQGSQFATTTQCGGPFGPSTTYCDTVINPSN
Ga0306922_110689611	3300032001	Soil	TYPWYAFNKTDHGFTYGADYPGTQFDYGKAAQFATTPQCGGPFGPESTFCDTVLSPVP
Ga0318562_108902711	3300032008	Soil	MAVNQYCASYGGPYCIYPWFAFNGVDNAFTYGADYPGTKFDYNQADQFAQTLQCGGPFGPGSTYCDTVLK
Ga0310911_104383721	3300032035	Soil	GPYCIYPWYALNAKGSAFTYGIDYTGTKFDYGQGSQFANPTQCGGPFGPSTTYCDTVINPSN
Ga0318556_104679641	3300032043	Soil	NATCPVYGGPFCTYPWYAFNKADHGFTYGADYPGTQFDYGQAAQFATMPQCGGPFGADSTFCDTVLSPVP
Ga0318524_102077571	3300032067	Soil	GGPFCTYPWYAFNKADHGFTYGADYPGTQFDYGKAAQFATTPQCGGPFGPESTFCDTVLSPVP
Ga0318524_106071651	3300032067	Soil	SYGGPYCIYPWYALNAKGSAFTYGIDYTGTKFDYGQGSQFANPTQCGGPFGPSTTYCDTVINPSN
Ga0318524_107585411	3300032067	Soil	DQAFTFGADYPGTKFDYGQAAQFATTPLCGGPFGPDSTFCDTVLSPTP
Ga0318525_101924451	3300032089	Soil	VNATCPAYGGPFCTYPWYTFNKADGAFTYGANYPGTQFQYGQAAQFATTMQCGGPFGPDS
Ga0318540_105009482	3300032094	Soil	AFNKTDHGFTYGADYPGTQFDYGKAAQFATTPQCGGPFGPESTFCDTALSPVP
Ga0306920_1007335013	3300032261	Soil	HGFTYGADYPGTQFDYGKAAQFATTPQCGGPFGPESTFCDTALSPVP
Ga0306920_1015291932	3300032261	Soil	MAVNQYCASYGGPYCIYPWFAFNGVDNAFTYGADYPGTKFDYNQADQFAQTLQCGGPFGP
Ga0335077_107237963	3300033158	Soil	NGKAGALTYGANYPGTRFDYGKADQFATTPQCGGPFGPDSTYCVTVIKPVPLRNSH
Ga0310914_109774482	3300033289	Soil	DHGFTYGADYPGTQFDYGKAAQFATTPQCGGPFGPESTFCDTALSPVP
Ga0316624_116082471	3300033486	Soil	GGPYCTYPWFAFNSAASALTYGGNYPGTKPPYDYGQAGQFATTMTCGGPFGPDSTYCDTLLNPKPQVG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061831

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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