NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F061895

Metagenome / Metatranscriptome Family F061895

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F061895
Family Type Metagenome / Metatranscriptome
Number of Sequences 131
Average Sequence Length 58 residues
Representative Sequence RPQASATDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSLD
Number of Associated Samples 117
Number of Associated Scaffolds 131

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.82 %
% of genes near scaffold ends (potentially truncated) 88.55 %
% of genes from short scaffolds (< 2000 bps) 84.73 %
Associated GOLD sequencing projects 110
AlphaFold2 3D model prediction Yes
3D model pTM-score0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (87.786 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(30.534 % of family members)
Environment Ontology (ENVO) Unclassified
(38.168 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(41.221 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 56.96%    β-sheet: 0.00%    Coil/Unstructured: 43.04%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.63
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 131 Family Scaffolds
PF07366SnoaL 9.16
PF01425Amidase 5.34
PF03551PadR 3.82
PF00072Response_reg 2.29
PF00266Aminotran_5 2.29
PF13545HTH_Crp_2 1.53
PF08818DUF1801 1.53
PF01850PIN 1.53
PF01904DUF72 1.53
PF01124MAPEG 0.76
PF09726Macoilin 0.76
PF13489Methyltransf_23 0.76
PF08494DEAD_assoc 0.76
PF01546Peptidase_M20 0.76
PF14235DUF4337 0.76
PF04264YceI 0.76
PF03069FmdA_AmdA 0.76
PF13361UvrD_C 0.76
PF13808DDE_Tnp_1_assoc 0.76
PF07687M20_dimer 0.76
PF13676TIR_2 0.76
PF03683UPF0175 0.76
PF12867DinB_2 0.76
PF01915Glyco_hydro_3_C 0.76

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 131 Family Scaffolds
COG0154Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidaseTranslation, ribosomal structure and biogenesis [J] 5.34
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 3.82
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 3.82
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 3.82
COG1801Sugar isomerase-related protein YecE, UPF0759/DUF72 familyGeneral function prediction only [R] 1.53
COG4430Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 familyFunction unknown [S] 1.53
COG5646Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)Posttranslational modification, protein turnover, chaperones [O] 1.53
COG5649Uncharacterized conserved protein, DUF1801 domainFunction unknown [S] 1.53
COG1201Lhr-like helicaseReplication, recombination and repair [L] 0.76
COG1472Periplasmic beta-glucosidase and related glycosidasesCarbohydrate transport and metabolism [G] 0.76
COG2353Polyisoprenoid-binding periplasmic protein YceIGeneral function prediction only [R] 0.76
COG2421Acetamidase/formamidaseEnergy production and conversion [C] 0.76
COG2886Predicted antitoxin, contains HTH domainGeneral function prediction only [R] 0.76

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms87.79 %
UnclassifiedrootN/A12.21 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2228664022|INPgaii200_c0576522All Organisms → cellular organisms → Bacteria646Open in IMG/M
2228664022|INPgaii200_c0802017All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1195Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101502212All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium740Open in IMG/M
3300000956|JGI10216J12902_102169604All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium711Open in IMG/M
3300001593|JGI12635J15846_10018704All Organisms → cellular organisms → Bacteria5727Open in IMG/M
3300001867|JGI12627J18819_10020822All Organisms → cellular organisms → Bacteria2674Open in IMG/M
3300004091|Ga0062387_100084083All Organisms → cellular organisms → Bacteria → Acidobacteria1658Open in IMG/M
3300005175|Ga0066673_10792037All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium542Open in IMG/M
3300005334|Ga0068869_101450235All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300005439|Ga0070711_101469825All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300005445|Ga0070708_101552439All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium616Open in IMG/M
3300005454|Ga0066687_10628253All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium638Open in IMG/M
3300005556|Ga0066707_10566823All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium730Open in IMG/M
3300005764|Ga0066903_100699619All Organisms → cellular organisms → Bacteria1786Open in IMG/M
3300005764|Ga0066903_101770322All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1179Open in IMG/M
3300005843|Ga0068860_101215079All Organisms → cellular organisms → Bacteria774Open in IMG/M
3300006354|Ga0075021_10149824All Organisms → cellular organisms → Bacteria1409Open in IMG/M
3300006804|Ga0079221_10708654All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium703Open in IMG/M
3300006852|Ga0075433_11966257All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300006881|Ga0068865_101044243All Organisms → cellular organisms → Bacteria717Open in IMG/M
3300006904|Ga0075424_100706998All Organisms → cellular organisms → Bacteria1076Open in IMG/M
3300009088|Ga0099830_10240932All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1428Open in IMG/M
3300009090|Ga0099827_10044390All Organisms → cellular organisms → Bacteria → Acidobacteria3307Open in IMG/M
3300009137|Ga0066709_101854634All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium842Open in IMG/M
3300009143|Ga0099792_10541882All Organisms → cellular organisms → Bacteria734Open in IMG/M
3300009162|Ga0075423_10084061All Organisms → cellular organisms → Bacteria3320Open in IMG/M
3300009792|Ga0126374_10353309All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1009Open in IMG/M
3300010043|Ga0126380_10822237All Organisms → cellular organisms → Bacteria763Open in IMG/M
3300010047|Ga0126382_10413358All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1057Open in IMG/M
3300010048|Ga0126373_11633392All Organisms → cellular organisms → Bacteria709Open in IMG/M
3300010360|Ga0126372_12487536All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300010361|Ga0126378_12713947All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium566Open in IMG/M
3300010362|Ga0126377_11301014All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium799Open in IMG/M
3300011269|Ga0137392_11192203All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300011270|Ga0137391_10183204All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1824Open in IMG/M
3300011270|Ga0137391_11532854All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium511Open in IMG/M
3300011271|Ga0137393_11108895All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300012203|Ga0137399_10679154Not Available867Open in IMG/M
3300012205|Ga0137362_10647335All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium910Open in IMG/M
3300012205|Ga0137362_10826980All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium793Open in IMG/M
3300012211|Ga0137377_10327414All Organisms → cellular organisms → Bacteria → Acidobacteria1467Open in IMG/M
3300012350|Ga0137372_10442252All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium976Open in IMG/M
3300012361|Ga0137360_10410155All Organisms → cellular organisms → Bacteria1143Open in IMG/M
3300012361|Ga0137360_11316597All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium624Open in IMG/M
3300012362|Ga0137361_10346216Not Available1363Open in IMG/M
3300012582|Ga0137358_10632441All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium717Open in IMG/M
3300012685|Ga0137397_10611618All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium810Open in IMG/M
3300012917|Ga0137395_10969626All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium611Open in IMG/M
3300012923|Ga0137359_10140873All Organisms → cellular organisms → Bacteria2147Open in IMG/M
3300012924|Ga0137413_10100401Not Available1803Open in IMG/M
3300012927|Ga0137416_11551068All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium602Open in IMG/M
3300012927|Ga0137416_11663766All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium582Open in IMG/M
3300012929|Ga0137404_10422958All Organisms → cellular organisms → Bacteria1178Open in IMG/M
3300012929|Ga0137404_10894338All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium809Open in IMG/M
3300012929|Ga0137404_11664213All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium592Open in IMG/M
3300012930|Ga0137407_10159610All Organisms → cellular organisms → Bacteria1999Open in IMG/M
3300012944|Ga0137410_11567258All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium576Open in IMG/M
3300014154|Ga0134075_10243686All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4777Open in IMG/M
3300014325|Ga0163163_12105909All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300015054|Ga0137420_1047470All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300015242|Ga0137412_10199620Not Available1598Open in IMG/M
3300015242|Ga0137412_10430920All Organisms → cellular organisms → Bacteria1017Open in IMG/M
3300015245|Ga0137409_10062621All Organisms → cellular organisms → Bacteria3495Open in IMG/M
3300015372|Ga0132256_100314741All Organisms → cellular organisms → Bacteria → Acidobacteria1652Open in IMG/M
3300015374|Ga0132255_100099066All Organisms → cellular organisms → Bacteria3954Open in IMG/M
3300015374|Ga0132255_100286626All Organisms → cellular organisms → Bacteria → Acidobacteria2366Open in IMG/M
3300016319|Ga0182033_10732297All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium868Open in IMG/M
3300016341|Ga0182035_10183338All Organisms → cellular organisms → Bacteria1640Open in IMG/M
3300016341|Ga0182035_10533180All Organisms → cellular organisms → Bacteria → Acidobacteria1007Open in IMG/M
3300016357|Ga0182032_11729304All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300016404|Ga0182037_11514258All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300017955|Ga0187817_10093286All Organisms → cellular organisms → Bacteria1890Open in IMG/M
3300018085|Ga0187772_10100154All Organisms → cellular organisms → Bacteria1866Open in IMG/M
3300018086|Ga0187769_10007024All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae7001Open in IMG/M
3300018482|Ga0066669_11624153All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium591Open in IMG/M
3300020199|Ga0179592_10352001All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300021086|Ga0179596_10675611All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes523Open in IMG/M
3300021088|Ga0210404_10608644Not Available621Open in IMG/M
3300021181|Ga0210388_11460077Not Available572Open in IMG/M
3300021404|Ga0210389_10119527All Organisms → cellular organisms → Bacteria2035Open in IMG/M
3300021405|Ga0210387_11829093Not Available511Open in IMG/M
3300021407|Ga0210383_10141069All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2045Open in IMG/M
3300021420|Ga0210394_11191123All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300021432|Ga0210384_11435255All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300021475|Ga0210392_10743824All Organisms → cellular organisms → Bacteria → Acidobacteria731Open in IMG/M
3300021478|Ga0210402_10491322All Organisms → cellular organisms → Bacteria1140Open in IMG/M
3300025905|Ga0207685_10246376All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium862Open in IMG/M
3300025941|Ga0207711_10986057All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium782Open in IMG/M
3300026319|Ga0209647_1238830All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium609Open in IMG/M
3300026320|Ga0209131_1123293All Organisms → cellular organisms → Bacteria1341Open in IMG/M
3300026326|Ga0209801_1215807All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium755Open in IMG/M
3300026333|Ga0209158_1204849All Organisms → cellular organisms → Bacteria → Acidobacteria688Open in IMG/M
3300026469|Ga0257169_1090401All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium504Open in IMG/M
3300026557|Ga0179587_10382563All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium916Open in IMG/M
3300026557|Ga0179587_11062182All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium533Open in IMG/M
3300027288|Ga0208525_1004128All Organisms → cellular organisms → Bacteria1497Open in IMG/M
3300027651|Ga0209217_1210440All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300027783|Ga0209448_10086749All Organisms → cellular organisms → Bacteria → Acidobacteria1049Open in IMG/M
3300027846|Ga0209180_10163088All Organisms → cellular organisms → Bacteria1285Open in IMG/M
3300027894|Ga0209068_10830597All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300030935|Ga0075401_11740693All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium765Open in IMG/M
3300031231|Ga0170824_108301016All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium538Open in IMG/M
3300031640|Ga0318555_10491919All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium665Open in IMG/M
3300031679|Ga0318561_10459083All Organisms → cellular organisms → Bacteria701Open in IMG/M
3300031681|Ga0318572_10293657All Organisms → cellular organisms → Bacteria960Open in IMG/M
3300031778|Ga0318498_10188469All Organisms → cellular organisms → Bacteria937Open in IMG/M
3300031792|Ga0318529_10480476All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium578Open in IMG/M
3300031799|Ga0318565_10181012All Organisms → cellular organisms → Bacteria1025Open in IMG/M
3300031819|Ga0318568_10359638All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium906Open in IMG/M
3300031823|Ga0307478_10929800All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium727Open in IMG/M
3300031845|Ga0318511_10215037All Organisms → cellular organisms → Bacteria857Open in IMG/M
3300031890|Ga0306925_11096355All Organisms → cellular organisms → Bacteria805Open in IMG/M
3300031946|Ga0310910_10789671All Organisms → cellular organisms → Bacteria748Open in IMG/M
3300031947|Ga0310909_11679161All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300032001|Ga0306922_12090952All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300032010|Ga0318569_10465263All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300032054|Ga0318570_10313118All Organisms → cellular organisms → Bacteria714Open in IMG/M
3300032059|Ga0318533_10213647All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1385Open in IMG/M
3300032076|Ga0306924_10521738All Organisms → cellular organisms → Bacteria1351Open in IMG/M
3300032205|Ga0307472_102015817All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium578Open in IMG/M
3300032828|Ga0335080_10439416All Organisms → cellular organisms → Bacteria → Acidobacteria1394Open in IMG/M
3300033180|Ga0307510_10369885All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium880Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil30.53%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil20.61%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil6.11%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.11%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.11%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.05%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.29%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.29%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.29%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.53%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.53%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.53%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.53%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.53%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.53%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.53%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.76%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.76%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.76%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.76%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.76%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.76%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.76%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.76%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza0.76%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.76%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.76%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2228664022Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300001867Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006354Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026319Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)EnvironmentalOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)EnvironmentalOpen in IMG/M
3300026333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)EnvironmentalOpen in IMG/M
3300026469Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-BEnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027288Soil and rhizosphere microbial communities from Laval, Canada - mgHMC (SPAdes)EnvironmentalOpen in IMG/M
3300027651Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027783Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027894Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300030935Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA7 SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031681Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20EnvironmentalOpen in IMG/M
3300031765Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22EnvironmentalOpen in IMG/M
3300031778Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24EnvironmentalOpen in IMG/M
3300031792Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23EnvironmentalOpen in IMG/M
3300031799Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21EnvironmentalOpen in IMG/M
3300031819Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031845Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032010Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22EnvironmentalOpen in IMG/M
3300032054Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300033180Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EMHost-AssociatedOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPgaii200_057652222228664022SoilPPASASDIQKLKIEISRLEILIKKLQTELQIERQYNQALELHVKSLTSLD
INPgaii200_080201712228664022SoilATDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTALD
INPhiseqgaiiFebDRAFT_10150221213300000364SoilHALPSVPSATHSQPQQPYAPTHNFSVPAPGRPQASATDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSLD*
JGI10216J12902_10216960423300000956SoilVPSTPQGQPHGSQTSYTPSHNFNVPAPNRPQASATDIQKLKTEISRLELLIKKLQAELQIERQYNQALELHVKSLTSLD*
JGI12635J15846_1001870413300001593Forest SoilAPPSPTFRPAGANPDIVKLRTEIARLELLIKKLQTELQIERQYNQALEQHVHNLTSTE*
JGI12627J18819_1002082213300001867Forest SoilASATDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSID*
Ga0062387_10008408313300004091Bog Forest SoilRPAATASDIHKLRSEISHLELLIKKLQTELQIERQYNQALELHVRALTQVD*
Ga0062595_10215462523300004479SoilSAAAPSFPPSAPAPAGFPAAPQAPARTTTAAGDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHIKSLTTLE*
Ga0066673_1079203713300005175SoilHSQPAQSHTPSHNFNVPAPNRPQASATDMQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSLD*
Ga0068869_10145023523300005334Miscanthus RhizosphereSFTPQPQPPARPMAAAGDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSLD*
Ga0070711_10146982523300005439Corn, Switchgrass And Miscanthus RhizospherePASAGDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSIE*
Ga0070708_10155243923300005445Corn, Switchgrass And Miscanthus RhizosphereSATDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSLD*
Ga0066687_1062825313300005454SoilSATDMQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSLD*
Ga0066707_1056682333300005556SoilFNIATPNRPQASATDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSLD*
Ga0066903_10069961913300005764Tropical Forest SoilSTGDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSLE*
Ga0066903_10177032213300005764Tropical Forest SoilAPNFPPTVPTPASFPAAPQAPARATAAASDLQKLKTEISRLELLIKKLQTELQIERQYNQALELHIKSLTTVE*
Ga0068860_10121507913300005843Switchgrass RhizosphereTTPSVPPAPNFISPAPVRPPASAGDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSID*
Ga0075021_1014982413300006354WatershedsLHRAPASASDVQKLKAEIAHLQLLIKKLQTELQIERQYNQALELHVRTLTHVD*
Ga0079221_1070865423300006804Agricultural SoilSPDIVKLRTEIARLELLIKKLQTELQIERQYNQALEQHVHNLTTTE*
Ga0075433_1196625713300006852Populus RhizospherePAPNFISPAPVRPPASAGDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSID*
Ga0068865_10104424313300006881Miscanthus RhizosphereMAAAGDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSLD*
Ga0075424_10070699823300006904Populus RhizospherePPAPNFVSQAPVRPPASAGDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSIE*
Ga0099830_1024093233300009088Vadose Zone SoilPDIIKLKTEIARLELLIKKLQTELQIERQYNQALEQHVHNLTNTD*
Ga0099827_1004439043300009090Vadose Zone SoilPAPPSPTFRAAPASPDIVKLRTEIARLELLIKKLQTELQIERQYNQALEQHVHNLTTME*
Ga0066709_10185463413300009137Grasslands SoilPPASQALQLAGPNSYAPSHNFDVAAPNRPQASATDFRKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSLE*
Ga0099792_1054188223300009143Vadose Zone SoilMQKLRAEISRLELLIKKLQTELQIERQYNQALEVHVRTLTALDQS
Ga0075423_1008406153300009162Populus RhizospherePSVPPAPNCISPAPVRPPASAADIQKLNTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSID*
Ga0126374_1035330923300009792Tropical Forest SoilMQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSIE*
Ga0126380_1082223723300010043Tropical Forest SoilARATAAPGDVQKLKTEISRLELLIKKLQTELQIERQYNQALELHIKSLTTLE*
Ga0126382_1041335823300010047Tropical Forest SoilPAAPSFAPQQQQPVRPPAASGDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSLE*
Ga0126373_1163339223300010048Tropical Forest SoilVPSPSHLQQFPPSSPAHTQPQAPARNFSLATPNRPTASVTDMQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTALD*
Ga0099796_1047748313300010159Vadose Zone SoilPPQPGFRAPGASPDIIKLKTEIARLELLIKKLQTELQIERQYNQALEQHVHNLTNTD*
Ga0126372_1248753613300010360Tropical Forest SoilFNAPVVVRPQANGSDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTTID*
Ga0126378_1271394713300010361Tropical Forest SoilAPVRPPAAAGDLQKLKTEISRLELLIKKLQTELQIERQYNQALELHIKSLTTLE*
Ga0126377_1130101413300010362Tropical Forest SoilQPGGRPATTGDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSLE*
Ga0126377_1336433013300010362Tropical Forest SoilVPNFQSIVPAAPSFAPQQQQPVRPPAASGDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSLE*
Ga0137392_1119220323300011269Vadose Zone SoilAPVRPTPDSLKLRAEIAHLELLIKKLQTELQIERQYNQALELRSRP*
Ga0137391_1018320443300011270Vadose Zone SoilSAPPSHAPSHNFNIATPNRPQASATDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSLD*
Ga0137391_1153285413300011270Vadose Zone SoilIATPNRPQASATDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSID*
Ga0137393_1110889513300011271Vadose Zone SoilRATTASPDIVKLRTEIARLELLIKKLQTELQIERQYNQALEQHVHNLTMTE*
Ga0137399_1067915413300012203Vadose Zone SoilQPAAPAQPHNFNVATPNRPQASGSDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTAID*
Ga0137362_1064733513300012205Vadose Zone SoilQHASQNSHAPSHNFNVATPNRPQASATDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSLD*
Ga0137362_1082698013300012205Vadose Zone SoilTPNRPQASATDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSLD*
Ga0137377_1032741433300012211Vadose Zone SoilAQPHNFNVATPNRPQASGSDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSID*
Ga0137387_1103200113300012349Vadose Zone SoilAHDLQKLRAEILRLELLIKKLQTELQIEREYNQTLELHIKTLRESE*
Ga0137372_1044225233300012350Vadose Zone SoilQVQQHAGPNSYAPSHNFNVATPNRPQASATDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSLD*
Ga0137386_1060541723300012351Vadose Zone SoilAPPQRPAPTSVDMQKLRAEISRLELLIKKLQTELQIERQYNQALEVHVRTLTGLDQS*
Ga0137360_1041015513300012361Vadose Zone SoilTSVDMQRLRAEISRLELLIKKLQTELQIERQYNQALEVHVRTLTGLDQS*
Ga0137360_1131659723300012361Vadose Zone SoilHAPSHNFNVATPNRPQASATDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSLD*
Ga0137361_1034621613300012362Vadose Zone SoilNFNIATPNRPQASATDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSLD*
Ga0137358_1063244113300012582Vadose Zone SoilAPNSYAPSHNFNIATPNRPQASATDIQKLNTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSLD*
Ga0137397_1061161823300012685Vadose Zone SoilYAPSHNFNIATPNRPQASATDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSLD*
Ga0137395_1096962623300012917Vadose Zone SoilPLSHSQPHSAPPSHAPSHNFNIATPNRPQASATDIQKLKTETARRELLIKKLQTELQIERQYNQALELHVKSLTSID*
Ga0137359_1014087343300012923Vadose Zone SoilPQASATDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSID*
Ga0137413_1010040113300012924Vadose Zone SoilPSHNFNIATPNRPQASATDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSLD*
Ga0137419_1032144843300012925Vadose Zone SoilPGFRAPGASPDIMKLKTEIARLELLIKKLQTELQIERQYNQALEQHVHNLTHTE*
Ga0137416_1155106813300012927Vadose Zone SoilPAPSHNFNVATPNRPQASATDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSID*
Ga0137416_1166376613300012927Vadose Zone SoilSPDIIKLKTEIARLELLIKKLQTELQIERQYNQALEQHVHNLTNTD*
Ga0137404_1042295843300012929Vadose Zone SoilFRAPGASPDIIKLKTEIARLELLIKKLQTELQIERQYNQALEQHVHNLTTME*
Ga0137404_1089433823300012929Vadose Zone SoilNIATPNRPQASATDIQKLKTEISRLELLIKKLQTELQIERQYNHALELHVKSLTSLD*
Ga0137404_1166421323300012929Vadose Zone SoilPNSYAPSHNFNIATPNRPQASATDIQKLKTEISRLELLIKKLQTELQIERQYNHALELHVKSLTSLD*
Ga0137407_1015961013300012930Vadose Zone SoilAAPNSYAPSHNFNIATPNRPQASATDIQKLKTEISRLELLIKKLQTELQIERQYNHALELHVKSLTSLD*
Ga0137410_1156725813300012944Vadose Zone SoilIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSID*
Ga0134075_1024368623300014154Grasslands SoilPRPAPSASDLQKLRAEIAHLELLIKKLQTELQIERQYNQALESQIRTLTQVE*
Ga0163163_1210590923300014325Switchgrass RhizosphereVPPAPNFISPAPVRPPASAGDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSID*
Ga0137420_104747013300015054Vadose Zone SoilDIVKLKTEIARLELLIKKLQTELQIERQQIERQYNQALEQHVHNLTNTD*
Ga0137412_1019962033300015242Vadose Zone SoilSHAPSHNFNIATPNRPQASATDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSLD*
Ga0137412_1043092023300015242Vadose Zone SoilMHSQPQQRYAPTHNFNVPAPSRLQASATDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSID*
Ga0137409_1006262173300015245Vadose Zone SoilAPSHNFNIATPNRPQASATDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSLD*
Ga0132256_10031474113300015372Arabidopsis RhizospherePPASAGDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSID*
Ga0132255_10009906613300015374Arabidopsis RhizospherePPATTSPSAPPAPNFVLQTSVRPPANAGDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSIE*
Ga0132255_10028662613300015374Arabidopsis RhizosphereASAGDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSLDY*
Ga0182033_1073229733300016319SoilNAANPPVASRSTSHVSDVQKLRSEIAHLELLIKKLQTELQIERQYNQALELHVRTLTQVE
Ga0182035_1018333813300016341SoilRPTATVTDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTALD
Ga0182035_1053318033300016341SoilPAAAPRPPATARDIQKLQTEISRLELLIKKLQTELQIERQYNQALELHVRMLTEVEQ
Ga0182032_1172930413300016357SoilAAPLHGQQQPYTPPMRPPLAPSDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSVE
Ga0182037_1151425813300016404SoilPAHTQPQAPTHNFSLATPNRPTATVTDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTALD
Ga0187817_1009328633300017955Freshwater SedimentTAPPAPRATSPASDIHKLRTEISRLELLIKKLQTELQIERQYNQALELHVRTLTQVE
Ga0187772_1010015413300018085Tropical PeatlandATLSDIHKLRAEISCLELLIKKLQTELQIERQYNQALELHVRALTKID
Ga0187769_1000702433300018086Tropical PeatlandSPAQRGGATLSDIHKLRAEISCLELLIKKLQTELQIERQYNKALELHVRALTKID
Ga0066669_1162415313300018482Grasslands SoilQQTTAPAQTHKFNVATPNRPQASGSDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSID
Ga0179592_1035200133300020199Vadose Zone SoilPDIIKLKTEIARLELLIKKLQTELQIERQYNQALEQHVHNLTNTD
Ga0179596_1067561123300021086Vadose Zone SoilAPFAAPPQRPAPTSVDMQKLRAEISRLELLIKKLQTELQIERQYNQALEVHVRTLTGLDQ
Ga0210404_1060864413300021088SoilSPASGDTRKLRAEISHLELLIKKLQTQLEIERQYNQALEQQIKALTESE
Ga0210388_1146007713300021181SoilNTPGPVNVAALHRPPSSVSDVQKLKAEISHLQLLLKKLQTELQIERQYNQALELHVRTLTQVD
Ga0210389_1011952733300021404SoilSNVGSRPTSHVSDVQKLRAEIAHLELLIKKLQTELQIERQYNQALELHVRTLTQVE
Ga0210387_1182909323300021405SoilNVAALHRPPSSVSDVQKLKAEISHLQLLLKKLQTELQIERQYNQALELHVRTLTQVD
Ga0210383_1014106913300021407SoilPVNVAALHRPPSSGSDVQKLKAEISHLQLLIKKLQTELQIERQYNQALELHVRTLTQVD
Ga0210394_1119112313300021420SoilPNRPQASGSDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSID
Ga0210384_1143525513300021432SoilRTAAAAADVHKLRGEISRLELLVKKLQTELQIERQYNQALEIQFKNFTQVD
Ga0210392_1074382423300021475SoilTAAAAADVHKLRGEISRLELLVKKLQTELQIERQYNQALEIQFKNFTQVD
Ga0210402_1049132233300021478SoilSSVSDVQKLKAEIAHLQLLIKKLQTELQIERQYNQALELHVRTLTQVE
Ga0210402_1050599613300021478SoilSTPTGPAANTPGPVNVAALHRPPSSVSDVQKLKAEISHLQLLLKKLQTELQIERQYNQALELHVRTLTQVD
Ga0207685_1024637623300025905Corn, Switchgrass And Miscanthus RhizosphereHNFSVPAPGRPQASATDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSVD
Ga0207711_1098605723300025941Switchgrass RhizosphereMAAAGDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSLD
Ga0209647_123883013300026319Grasslands SoilHQAPQAPAHNFNVATPNRPQASGSDFQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSID
Ga0209131_112329313300026320Grasslands SoilQASATDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSLD
Ga0209801_121580723300026326SoilRPQASATDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSLD
Ga0209158_120484923300026333SoilPRPAPSASDLQKLRAEIAHLELLIKKLQTELQIERQYNQALEAQIRALTQVE
Ga0257169_109040113300026469SoilPQASATDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSID
Ga0179587_1038256333300026557Vadose Zone SoilATPNRPQASATDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSID
Ga0179587_1106218223300026557Vadose Zone SoilPGASPDITKLKTEIARLELLIKKLQTELQIERQYNQALEQHVHNLTNTD
Ga0208525_100412813300027288SoilNNSEAQKLRAEISRLDLLIKKLQTELQIERQYNQALELHVRSLLQID
Ga0209217_121044023300027651Forest SoilPASASDVQKLKAENSHLQLLIKKLQTELQIERQYNQALELHFRTLTHVD
Ga0209448_1008674933300027783Bog Forest SoilRPAATASDIHKLRSEISHLELLIKKLQTELQIERQYNQALELHVRALTQVD
Ga0209180_1016308813300027846Vadose Zone SoilAAPASPDIVKLRTEIARLELLIKKLQTELQIERQYNQALEQHVHNLTTME
Ga0209068_1083059713300027894WatershedsLHRAPASASDVQKLKAEIAHLQLLIKKLQTELQIERQYNQALELHVRTLTHVD
Ga0075401_1174069323300030935SoilSHAPSHNFNVATPNRPQASATDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSLD
Ga0170824_10830101623300031231Forest SoilANVGSRPTSHVSDVQKLRAEIAHLELLIKKLQTELQIERQYNQALELHVRTLTQVE
Ga0318555_1049191923300031640SoilGFPPAPQAPARTTAAVGDVQKLKTEISRLELLIKKLQTELQIERQYNQALELHIKSLTTL
Ga0318561_1045908323300031679SoilVPAPSHLQQFPPSSPAHTQPQAPTHNFSLATPNRPTATVTDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTALD
Ga0318572_1029365723300031681SoilPYTPPMRPPLAPSDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSVE
Ga0318554_1075794823300031765SoilPHAPAAPLHGQQQPYTPPMRPPLAPSDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSVE
Ga0318498_1018846913300031778SoilQPYTPPMRPPLAPSDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSVE
Ga0318529_1048047623300031792SoilVGDVQKLKTEISRLELLIKKLQTELQIERQYNQALELHIKSLTTLE
Ga0318565_1018101223300031799SoilQQPYTPPMRPPLAPSDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSVE
Ga0318568_1035963813300031819SoilTTAAVGDVQKLKTEISRLELLIKKLQTELQIERQYNQALELHIKSLTTLE
Ga0307478_1092980023300031823Hardwood Forest SoilHSQPHSAPASYVPSHNFNIATPNRPQASATDMQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSLE
Ga0318511_1021503713300031845SoilQQPFSPPARMPAPASDIQKLKTEILRLELLIKKLQTELQIERQYNQALELHVKSLTSVE
Ga0306925_1109635513300031890SoilPTATVTDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTALD
Ga0310910_1078967113300031946SoilAPLHGQQQPYTPPMRPPLAPSDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSVE
Ga0310909_1167916123300031947SoilGQQQPYTPPMRPPLAPSDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSV
Ga0306922_1209095213300032001SoilPSRPPIAASDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSIE
Ga0318569_1046526313300032010SoilPAAPLHGQQQPYTPPMRPPLAPSDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSVE
Ga0318570_1031311823300032054SoilPMRPPLAPSDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSVE
Ga0318533_1021364733300032059SoilVGGVPPAARSFSASDFHKLRAEISCLELLVKKLQTELQVERQYNQALELHVRALTRVE
Ga0306924_1052173813300032076SoilTQPQAPTHNFSLATPNRPTATVTDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTALD
Ga0307472_10201581713300032205Hardwood Forest SoilSVPAPGRPQASATDIQKLKTEISRLELLIKKLQTELQIERQYNQALELHVKSLTSLD
Ga0335080_1043941623300032828SoilVSSPLSDVARLKAEIAHLELLIKKLQTELQIERQYNQALELHVRTLTQLE
Ga0307510_1036988513300033180EctomycorrhizaYNSAPANSPAHNFNLATPNRLQASATDIQKLKTEISRLELLIKKLQTELQIERQYNQALEMHVKSLTALD
Ga0310914_1060413013300033289SoilPSVRVGSALTEITKLKAEIAHLELLVKKLQTELQIERQYNQALELQVRALTHIE

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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