Metagenome / Metatranscriptome Family F061931

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061931
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	42 residues
Representative Sequence	MKEMTANDDFERFRTGAAKYAAYLETPEGQLRLDLAFANL
Number of Associated Samples	118
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.92 %
% of genes near scaffold ends (potentially truncated)	99.24 %
% of genes from short scaffolds (< 2000 bps)	91.60 %
Associated GOLD sequencing projects	113
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.130 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (12.977 % of family members)
Environment Ontology (ENVO)	Unclassified (24.427 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.779 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.59% β-sheet: 0.00% Coil/Unstructured: 54.41%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF07944	Glyco_hydro_127	6.11
PF01841	Transglut_core	6.11
PF00528	BPD_transp_1	5.34
PF14559	TPR_19	2.29
PF07228	SpoIIE	1.53
PF07992	Pyr_redox_2	1.53
PF00152	tRNA-synt_2	1.53
PF08439	Peptidase_M3_N	1.53
PF00005	ABC_tran	1.53
PF00561	Abhydrolase_1	1.53
PF00294	PfkB	0.76
PF00196	GerE	0.76
PF16757	Fucosidase_C	0.76
PF04055	Radical_SAM	0.76
PF13776	DUF4172	0.76
PF00400	WD40	0.76
PF00578	AhpC-TSA	0.76
PF13602	ADH_zinc_N_2	0.76
PF13545	HTH_Crp_2	0.76
PF04261	Dyp_perox	0.76
PF04454	Linocin_M18	0.76
PF00665	rve	0.76
PF07722	Peptidase_C26	0.76
PF04986	Y2_Tnp	0.76
PF07715	Plug	0.76
PF13590	DUF4136	0.76
PF05694	SBP56	0.76
PF07969	Amidohydro_3	0.76
PF01400	Astacin	0.76
PF13641	Glyco_tranf_2_3	0.76
PF14871	GHL6	0.76
PF07676	PD40	0.76
PF01914	MarC	0.76
PF12840	HTH_20	0.76
PF00069	Pkinase	0.76
PF02574	S-methyl_trans	0.76
PF05711	TylF	0.76
PF07730	HisKA_3	0.76
PF12697	Abhydrolase_6	0.76
PF04185	Phosphoesterase	0.76
PF13365	Trypsin_2	0.76
PF13185	GAF_2	0.76
PF13495	Phage_int_SAM_4	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG3533	Beta-L-arabinofuranosidase, GH127 family	Carbohydrate transport and metabolism [G]	6.11
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.05
COG0017	Aspartyl/asparaginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	1.53
COG0173	Aspartyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	1.53
COG1164	Oligoendopeptidase F	Amino acid transport and metabolism [E]	1.53
COG1190	Lysyl-tRNA synthetase, class II	Translation, ribosomal structure and biogenesis [J]	1.53
COG2269	Elongation factor P--beta-lysine ligase (EF-P beta-lysylation pathway)	Translation, ribosomal structure and biogenesis [J]	1.53
COG0646	Methionine synthase I (cobalamin-dependent), methyltransferase domain	Amino acid transport and metabolism [E]	0.76
COG2040	Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)	Amino acid transport and metabolism [E]	0.76
COG2095	Small neutral amino acid transporter SnatA, MarC family	Amino acid transport and metabolism [E]	0.76
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.76
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.76
COG2837	Periplasmic deferrochelatase/peroxidase EfeB	Inorganic ion transport and metabolism [P]	0.76
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.76
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.76
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.76
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.76
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.76
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.76
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.13 %
Unclassified	root	N/A	6.87 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.13 %
Unclassified	root	N/A	6.87 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.13 %
Unclassified	root	N/A	6.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	36.64 %
Unclassified	root	N/A	6.87 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	3.82 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.29 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.29 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	19.85 %
Unclassified	root	N/A	6.87 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3.82 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.05 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2.29 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.29 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.85 %
Unclassified	root	N/A	6.87 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	3.82 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.05 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.29 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	2.29 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.85 %
Unclassified	root	N/A	6.87 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3.82 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.05 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.29 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.53 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.76 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.85 %
Unclassified	root	N/A	6.87 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3.82 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.29 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.53 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.76 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.76 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.76 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.85 %
Unclassified	root	N/A	6.87 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3.82 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.29 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.53 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.76 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	0.76 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.76 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.85 %
Unclassified	root	N/A	6.87 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3.82 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.29 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.53 %
Granulicella sp. S156	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. S156	0.76 %
Nocardioides panacis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides panacis	0.76 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.76 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100122767	All Organisms → cellular organisms → Bacteria	2446	Open in IMG/M
3300002562\|JGI25382J37095_10280239	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300002910\|JGI25615J43890_1056105	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300004080\|Ga0062385_10438576	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300004479\|Ga0062595_100188864	All Organisms → cellular organisms → Bacteria → Acidobacteria	1258	Open in IMG/M
3300004479\|Ga0062595_101949031	All Organisms → cellular organisms → Bacteria → Acidobacteria	565	Open in IMG/M
3300005176\|Ga0066679_10022951	All Organisms → cellular organisms → Bacteria	3335	Open in IMG/M
3300005330\|Ga0070690_100192546	All Organisms → cellular organisms → Bacteria	1414	Open in IMG/M
3300005451\|Ga0066681_10627207	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300005542\|Ga0070732_10542251	All Organisms → cellular organisms → Bacteria → Acidobacteria	705	Open in IMG/M
3300005553\|Ga0066695_10137398	All Organisms → cellular organisms → Bacteria → Proteobacteria	1516	Open in IMG/M
3300005563\|Ga0068855_102160215	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300005569\|Ga0066705_10252660	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1117	Open in IMG/M
3300005842\|Ga0068858_101715312	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300005921\|Ga0070766_10218870	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300006237\|Ga0097621_101105376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	744	Open in IMG/M
3300006796\|Ga0066665_10536613	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300006893\|Ga0073928_10859452	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300007258\|Ga0099793_10240327	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	873	Open in IMG/M
3300009011\|Ga0105251_10209297	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300009088\|Ga0099830_11883230	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300009089\|Ga0099828_11027729	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300009137\|Ga0066709_104409445	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300010048\|Ga0126373_10093746	All Organisms → cellular organisms → Bacteria	2763	Open in IMG/M
3300010048\|Ga0126373_10307630	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1583	Open in IMG/M
3300010048\|Ga0126373_11426202	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300010301\|Ga0134070_10002618	All Organisms → cellular organisms → Bacteria	5357	Open in IMG/M
3300010303\|Ga0134082_10009715	All Organisms → cellular organisms → Bacteria → Acidobacteria	3460	Open in IMG/M
3300010366\|Ga0126379_12677771	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300010376\|Ga0126381_102792730	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300011120\|Ga0150983_10382781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300011120\|Ga0150983_10812737	All Organisms → cellular organisms → Bacteria → Acidobacteria	565	Open in IMG/M
3300011269\|Ga0137392_10695434	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	842	Open in IMG/M
3300011270\|Ga0137391_10527351	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	997	Open in IMG/M
3300011270\|Ga0137391_10796711	All Organisms → cellular organisms → Bacteria → Acidobacteria	779	Open in IMG/M
3300011271\|Ga0137393_10250534	All Organisms → cellular organisms → Bacteria	1503	Open in IMG/M
3300012202\|Ga0137363_11478660	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300012203\|Ga0137399_10753693	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	820	Open in IMG/M
3300012205\|Ga0137362_10492365	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1061	Open in IMG/M
3300012205\|Ga0137362_11367611	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300012205\|Ga0137362_11440347	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300012212\|Ga0150985_122111259	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300012361\|Ga0137360_11407015	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300012362\|Ga0137361_10196230	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1824	Open in IMG/M
3300012362\|Ga0137361_11004728	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300012469\|Ga0150984_115228730	All Organisms → cellular organisms → Bacteria → Acidobacteria	618	Open in IMG/M
3300012971\|Ga0126369_10608465	All Organisms → cellular organisms → Bacteria	1163	Open in IMG/M
3300012984\|Ga0164309_10054597	All Organisms → cellular organisms → Bacteria	2332	Open in IMG/M
3300013297\|Ga0157378_10245926	All Organisms → cellular organisms → Bacteria → Acidobacteria	1711	Open in IMG/M
3300015206\|Ga0167644_1081750	All Organisms → cellular organisms → Bacteria → Acidobacteria	1021	Open in IMG/M
3300015245\|Ga0137409_10117183	All Organisms → cellular organisms → Bacteria	2457	Open in IMG/M
3300015372\|Ga0132256_100350368	Not Available	1570	Open in IMG/M
3300015373\|Ga0132257_100668578	All Organisms → cellular organisms → Bacteria	1288	Open in IMG/M
3300016341\|Ga0182035_11603466	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300016371\|Ga0182034_11407486	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300017823\|Ga0187818_10567047	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	512	Open in IMG/M
3300017932\|Ga0187814_10041307	All Organisms → cellular organisms → Bacteria	1703	Open in IMG/M
3300017943\|Ga0187819_10036438	All Organisms → cellular organisms → Bacteria	2908	Open in IMG/M
3300017947\|Ga0187785_10440806	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300017955\|Ga0187817_10185236	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300017955\|Ga0187817_10988704	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300017970\|Ga0187783_10298072	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1176	Open in IMG/M
3300017972\|Ga0187781_11486946	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300017975\|Ga0187782_11551096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300017994\|Ga0187822_10063487	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300018090\|Ga0187770_10719772	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300018433\|Ga0066667_12080382	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300018468\|Ga0066662_11059280	All Organisms → cellular organisms → Bacteria → Acidobacteria	807	Open in IMG/M
3300020579\|Ga0210407_10827824	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300020579\|Ga0210407_11010163	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300020582\|Ga0210395_10452399	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300020582\|Ga0210395_10518906	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	896	Open in IMG/M
3300020583\|Ga0210401_10964566	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. S156	711	Open in IMG/M
3300021046\|Ga0215015_10732400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	829	Open in IMG/M
3300021171\|Ga0210405_10131668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	1978	Open in IMG/M
3300021401\|Ga0210393_10294612	All Organisms → cellular organisms → Bacteria	1318	Open in IMG/M
3300021404\|Ga0210389_10543603	Not Available	914	Open in IMG/M
3300021406\|Ga0210386_11772545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides panacis	509	Open in IMG/M
3300021407\|Ga0210383_11311769	Not Available	605	Open in IMG/M
3300021420\|Ga0210394_10383565	All Organisms → cellular organisms → Bacteria → Acidobacteria	1236	Open in IMG/M
3300021433\|Ga0210391_11041667	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300021439\|Ga0213879_10043980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1164	Open in IMG/M
3300021477\|Ga0210398_11060172	Not Available	645	Open in IMG/M
3300021560\|Ga0126371_12556482	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300022528\|Ga0242669_1040993	All Organisms → cellular organisms → Bacteria → Acidobacteria	762	Open in IMG/M
3300023259\|Ga0224551_1008102	All Organisms → cellular organisms → Bacteria → Acidobacteria	1750	Open in IMG/M
3300024246\|Ga0247680_1019940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	970	Open in IMG/M
3300024249\|Ga0247676_1074143	All Organisms → cellular organisms → Bacteria → Acidobacteria	562	Open in IMG/M
3300025899\|Ga0207642_10330352	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	893	Open in IMG/M
3300025903\|Ga0207680_10795241	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300025907\|Ga0207645_10263387	All Organisms → cellular organisms → Bacteria	1142	Open in IMG/M
3300025919\|Ga0207657_10291135	All Organisms → cellular organisms → Bacteria	1295	Open in IMG/M
3300025937\|Ga0207669_11343815	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300026004\|Ga0208416_1015181	All Organisms → cellular organisms → Bacteria → Acidobacteria	605	Open in IMG/M
3300026022\|Ga0208649_1021618	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300026323\|Ga0209472_1267607	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300026515\|Ga0257158_1101976	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	567	Open in IMG/M
3300026538\|Ga0209056_10044971	All Organisms → cellular organisms → Bacteria → Proteobacteria	4004	Open in IMG/M
3300026547\|Ga0209156_10201568	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300026557\|Ga0179587_10161949	All Organisms → cellular organisms → Bacteria	1399	Open in IMG/M
3300026990\|Ga0207824_1033715	Not Available	544	Open in IMG/M
3300027172\|Ga0208098_1018928	All Organisms → cellular organisms → Bacteria → Acidobacteria	676	Open in IMG/M
3300027497\|Ga0208199_1125042	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300027570\|Ga0208043_1060905	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1081	Open in IMG/M
3300027576\|Ga0209003_1105723	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	533	Open in IMG/M
3300027629\|Ga0209422_1128597	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	576	Open in IMG/M
3300027654\|Ga0209799_1136216	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300027654\|Ga0209799_1154059	Not Available	523	Open in IMG/M
3300027680\|Ga0207826_1178647	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300027698\|Ga0209446_1042733	All Organisms → cellular organisms → Bacteria	1143	Open in IMG/M
3300027783\|Ga0209448_10284561	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300027889\|Ga0209380_10195570	All Organisms → cellular organisms → Bacteria	1187	Open in IMG/M
3300027905\|Ga0209415_10263456	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1533	Open in IMG/M
3300027986\|Ga0209168_10144380	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1209	Open in IMG/M
3300028016\|Ga0265354_1006307	All Organisms → cellular organisms → Bacteria → Acidobacteria	1180	Open in IMG/M
3300029944\|Ga0311352_10900067	Not Available	686	Open in IMG/M
3300031231\|Ga0170824_104071953	Not Available	768	Open in IMG/M
3300031236\|Ga0302324_100027666	All Organisms → cellular organisms → Bacteria	10796	Open in IMG/M
3300031474\|Ga0170818_108822102	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	986	Open in IMG/M
3300031708\|Ga0310686_100375573	Not Available	1867	Open in IMG/M
3300031740\|Ga0307468_102572102	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300031754\|Ga0307475_10499781	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300031754\|Ga0307475_11539714	All Organisms → cellular organisms → Bacteria → Acidobacteria	509	Open in IMG/M
3300031823\|Ga0307478_11338569	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300031954\|Ga0306926_11663051	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300031962\|Ga0307479_11726111	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300032076\|Ga0306924_11289564	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300032261\|Ga0306920_100083031	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4715	Open in IMG/M
3300032898\|Ga0335072_10259625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1988	Open in IMG/M
3300033134\|Ga0335073_12145971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300033402\|Ga0326728_11170696	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.55%
Host-Associated	Host-Associated	11.45%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.92%
Plants	Host-Associated → Plants	11.45%
Aquatic	Environmental → Aquatic	7.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.86%
Freshwater	Environmental → Aquatic → Freshwater	6.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.87%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.82%
Peat	Environmental → Terrestrial → Peat	3.05%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.76%
Roots	Host-Associated → Plants → Roots	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.07%
Loam	Environmental → Terrestrial → Soil → Loam	9.92%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.87%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.34%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.05%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.53%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.76%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.14%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.16%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.34%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.58%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.05%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.29%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.53%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.76%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.76%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.11%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.34%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.58%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.58%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.82%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.05%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.29%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.29%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.53%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.53%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.53%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.53%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.53%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.76%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.76%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.76%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.76%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.76%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.76%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.76%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023259	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 20-24	Environmental	Open in IMG/M
3300024246	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK21	Environmental	Open in IMG/M
3300024249	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026004	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302 (SPAdes)	Environmental	Open in IMG/M
3300026022	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_201 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026990	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 73 (SPAdes)	Environmental	Open in IMG/M
3300027172	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF038 (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028016	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1	Host-Associated	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1001227673	3300002245	Forest Soil	MQKIAKAGSEHFQSGADKYAAYLETPEGRLRSDLAFAHLQEFLPLPRTR
JGI25382J37095_102802392	3300002562	Grasslands Soil	MQMTAKADSGCFQSGADKYAAYLETPEGRLRCDLVFANLQDFLPLPQTKLSLR
JGI25615J43890_10561051	3300002910	Grasslands Soil	MKTSAKPDTGFRSDAGKYAAYLATPEGRLRLDLAFANLQE
Ga0062385_104385761	3300004080	Bog Forest Soil	MTIASNDERFQHGAQDYAAYLQSPEGRWRADLALANLQDF
Ga0062595_1001888641	3300004479	Soil	MTANSNSDSNDDLERFQTGAPKYAAYLETPEGRLRLDLAFA
Ga0062595_1019490311	3300004479	Soil	MEMTATTDIERFRAGATQYAAYLETPEGRLRLDLAFDTLQEFLPQATQSSH
Ga0066679_100229511	3300005176	Soil	MKEMTVNDDFERFRTGAAKYAAYLETPEGRLRLDLAFSNLQDFLPQATRSLLA
Ga0070690_1001925461	3300005330	Switchgrass Rhizosphere	MKEMTANDDCERFRTGAAKYAAYLETPEGRLRLDLALANLQDFLPRAT
Ga0066681_106272071	3300005451	Soil	MQMTAKPASEGFQSGADKYAAYLEILEGRLRCGLVFANLQDFLVLPQSRRSLR
Ga0070732_105422512	3300005542	Surface Soil	MKKLTANADREHFQSEADKYATYLETPEGRLRLDLPFSNLQEFLALPQGKA
Ga0066695_101373983	3300005553	Soil	MKKMTADGERFRTGAAKYAAYLETPEGQLRLDLAFANL
Ga0068855_1021602151	3300005563	Corn Rhizosphere	MMQMTAANDDFERFRTGAAKYAAYLETPEGRLRLDL
Ga0066705_102526603	3300005569	Soil	MKEMTADDDFERFRTGTAKYAGYLETPEGRLRLDLAFA
Ga0068858_1017153122	3300005842	Switchgrass Rhizosphere	MLREKMSTHTDSERFLSGAGKYAAYLETPEGRLRLDLA
Ga0070766_102188701	3300005921	Soil	MNTANDDPERFQREAHEYAAYLETPEGRLRLDLPFANLQESLPL
Ga0097621_1011053762	3300006237	Miscanthus Rhizosphere	MIINAADERFLSDAARYAAYLETPEGRLRLDIAFANLQ
Ga0066665_105366131	3300006796	Soil	MQMTAKADSGCFQSGADKYAAYLETPEGRLRCDLVFANLQDF
Ga0073928_108594522	3300006893	Iron-Sulfur Acid Spring	MKVPAKAASERFQGGAHDYAAYLETPEGRLRSDLTLANLQDFLPLLQAKG
Ga0099793_102403272	3300007258	Vadose Zone Soil	MKMTAEADSERFQSGANQYAVYLETPEGRLRSDLAF
Ga0105251_102092971	3300009011	Switchgrass Rhizosphere	MKEMTANDDCERFRTGAAKYAAYLETPEGQLRLDLALAN
Ga0099830_118832301	3300009088	Vadose Zone Soil	MTAKADSGRFQSGADKYAAYLETPEGRLRCDLSFANLQDFLPLPQTKL
Ga0099828_110277291	3300009089	Vadose Zone Soil	MKTSAQTDSERFQSGADKYAAYLETPEGRLRLDLAF
Ga0066709_1044094451	3300009137	Grasslands Soil	LPEWRKKEMIANDDFERFRSGAAKYAAYLETPEGQLRLDLAF
Ga0126373_100937464	3300010048	Tropical Forest Soil	MNMMAKADRNRFQTDAGKYAAYLETPEGRLRLDLAFANLQ
Ga0126373_103076302	3300010048	Tropical Forest Soil	VKASAKTDRRFQSDAGKYAAYLETPEGRLRLDLTFAN
Ga0126373_114262022	3300010048	Tropical Forest Soil	MTITTNSDDERFRAGAEKYASYLETREGRLRMDLTFLNLQEFLPVK
Ga0134070_100026186	3300010301	Grasslands Soil	MKEMTADDDFERFRTGAAKYAGYLETPEGRLRLDLAFAN
Ga0134082_100097151	3300010303	Grasslands Soil	MKEMTANDDFERFRTGAAKYAAYLETPEGQLRLDLAFANL
Ga0126379_126777712	3300010366	Tropical Forest Soil	MKRIAPNAGHERFQSGAEKYAAYLETPEGRLRLDLTFANLRESLPKSAQ
Ga0126381_1027927302	3300010376	Tropical Forest Soil	MNVKEDFERFGNGAEKYAAYLETPEGRLRLDLPLA
Ga0150983_103827811	3300011120	Forest Soil	MTTSPECDRFQSGADKYAAYLDTPDGRLHLDLTLANLQEFLPQAT
Ga0150983_108127371	3300011120	Forest Soil	MKKLTANADREHFQSEADKYATYLETPEGRLRLDLPFSNLQEF
Ga0137392_106954342	3300011269	Vadose Zone Soil	MKMIAKADSGRFQSGADKYAAYLETPEGRLRCDLTFANLQDFLPLPQT
Ga0137391_105273512	3300011270	Vadose Zone Soil	MTANDDFERFRTGAAKYAAYLETPEGQLRLDLAFANLQ
Ga0137391_107967111	3300011270	Vadose Zone Soil	MKEMTANDDFERFRTGAAKYAAYLETPEGQLRLDLAFA
Ga0137393_102505342	3300011271	Vadose Zone Soil	MMMTAEAESERFQSGASKYAVYLETPEGRLRSDLAFADLQDFLLLPAKASLCAL
Ga0137363_114786601	3300012202	Vadose Zone Soil	MKEMIANDDFERFRTGAAKYAPYLETPEGQLRLDLAVANLQDFFP
Ga0137399_107536932	3300012203	Vadose Zone Soil	MPLTAKPDGDRFQNGADKYAAYLETPEGRLRCGLAF
Ga0137362_104923651	3300012205	Vadose Zone Soil	MQMTAKPDSDRFQSGADKYAAYLETPEGRLRCGLA
Ga0137362_113676112	3300012205	Vadose Zone Soil	MKEMIVNDDFERFRTGAAKYAAYLETPEGQLRLDLAFAN
Ga0137362_114403471	3300012205	Vadose Zone Soil	MTANDDLERFRTGAAKYAAYLETPDGQLRLDLAFANLQ
Ga0150985_1221112591	3300012212	Avena Fatua Rhizosphere	MTCNDTLERFRTGAAKYSMYLGTPEGRLRIDLALANLQDFLPQDPR
Ga0137360_114070152	3300012361	Vadose Zone Soil	MQMTAKPDSDRFQSGADKYAAYLETPEGRLRCGLAFAN
Ga0137361_101962303	3300012362	Vadose Zone Soil	MKEMTAHDDFERFRTGAAKYAAYLETPEGQLRLDL
Ga0137361_110047281	3300012362	Vadose Zone Soil	MKEMIANDDFERFRTGAAKYAAYLDTPEGRLRLDLAFANL
Ga0150984_1152287301	3300012469	Avena Fatua Rhizosphere	MKIMAGNAEDERFQTGAARYATYLETPEGRLRIDLA
Ga0126369_106084652	3300012971	Tropical Forest Soil	MSTTVRSDSERFRSDAQKYAAYLETPEGRLRLDLA
Ga0164309_100545971	3300012984	Soil	MKEMTANDDCERFRTGAAKYAAYLETPEGQLRLDLALANLQDFLP
Ga0157378_102459262	3300013297	Miscanthus Rhizosphere	MEMTATTDIERFRAGATQYAAYLETPEGRLRLDLAFDTLQEFLP
Ga0167644_10817502	3300015206	Glacier Forefield Soil	LKIPTNADGERFQSDANKYAAYLETPDGRLRSGLALANLLDFLPLQ
Ga0137409_101171832	3300015245	Vadose Zone Soil	MMAETDINRFQSDANKYAAYLETPEGRLRADLSP*
Ga0132256_1003503681	3300015372	Arabidopsis Rhizosphere	MKELTADADFERFRTGAAKYAASLGTPEGRLRLDLALA
Ga0132257_1006685781	3300015373	Arabidopsis Rhizosphere	MKELTADADFERFRTGAAKYAAYLGTPEGRLRLDL
Ga0182035_116034662	3300016341	Soil	MSTTARSDSERFRSDAQKYAAYLETPEGRLRLDLALANVREFLPVPAAN
Ga0182034_114074861	3300016371	Soil	MTTTSDAERFRAEAAKYAAYLETPEGRLRIDLAIANLQEFLPR
Ga0187818_105670471	3300017823	Freshwater Sediment	MQMTAKVDSEHFQSGADKYAAYLETPEGRLRSDLAF
Ga0187814_100413074	3300017932	Freshwater Sediment	MKKVASNADRQRFQSGADKYAAYLKTPEGRLRLDLAFASLQEFLPP
Ga0187819_100364382	3300017943	Freshwater Sediment	MKKIASKADSQRFQSGADKYAAYLKTPEGRLRLDLAFA
Ga0187785_104408062	3300017947	Tropical Peatland	MNRIVANTECERFQSGVEKYAAYLKTSEGRLRLDLTFANMQEFLP
Ga0187817_101852362	3300017955	Freshwater Sediment	MQMTAKADSEGFQSGASKYAVYLETPEGRLRSDLAFTNLQDFLPQ
Ga0187817_109887041	3300017955	Freshwater Sediment	MKKVASNADRQRFQSGADKYAAYLKTPEGRLRLDLAFASLQEFLPPP
Ga0187783_102980723	3300017970	Tropical Peatland	MKKMTANADRERFRSGADKYAAYLETPEGRLRLDLAFAYLQEFLPQATGSLRA
Ga0187781_114869461	3300017972	Tropical Peatland	MKKMGTNPDAERFQREADKYASYLETPEGRLRIDLAFAN
Ga0187782_115510961	3300017975	Tropical Peatland	MKKMSTNADAERFQREADKYATYLGTPEGRLRIDLAFAN
Ga0187822_100634871	3300017994	Freshwater Sediment	MKETTADDLERFRSGAAKYAAYLETPLGRLRLDLSFANLQDFLPPATRPLSA
Ga0187770_107197721	3300018090	Tropical Peatland	MKKMTANADGERFQSGADKYAAYLETPEGRLRLDLTFANLQEF
Ga0066667_120803821	3300018433	Grasslands Soil	MKEITANDDFERFRTGAAKYAAYLETPEGQLRLDLAFAN
Ga0066662_110592801	3300018468	Grasslands Soil	MKKLTANADSEHFQSEADKYATYLETPEGRLRLGLPFSNLQELLPLPQ
Ga0210407_108278242	3300020579	Soil	MKMTAKADSERFQSGANEYAVYLDTPEGRLRSDLAFRNL
Ga0210407_110101631	3300020579	Soil	MQLTAKPDSNRFQSDADKYAAYLETPEGRLRCGLAFANVQDFLVLPRSGRALRGL
Ga0210395_104523991	3300020582	Soil	MKETTANDEDDFERFRTGAAKYAAYLETPEGRLRL
Ga0210395_105189062	3300020582	Soil	MQMTAKADSEGFQSGANKYADYLETPEGRLRSDLA
Ga0210401_109645662	3300020583	Soil	MKEITANHDLERFRAGAAKYAAYLETPEGRLRVDLAFANLR
Ga0215015_107324001	3300021046	Soil	MKMTAKADSERFQSGADKYAAYLETPEGRLRSDVAFANLQDFLPLEAKPSLCALD
Ga0210405_101316681	3300021171	Soil	MKMTAKADAERFHSGANQYGAYLETPEGRLRSDLAFTNLQDFLPKRP
Ga0210393_102946121	3300021401	Soil	MQKIAKAGSEHFQSGADKYAAYLETPEGRLRSDLA
Ga0210389_105436031	3300021404	Soil	MAVNADRERFQNDADKYAAYLETAEGRLRLDLSFANLQESLPHK
Ga0210386_117725451	3300021406	Soil	MKETTANDDLERFRTGVAKFAAYLETPEGKLRLNLAFA
Ga0210383_113117691	3300021407	Soil	MTAKADSERFQSGADKYAAYLVGTPEGRLRSDLAFA
Ga0210394_103835651	3300021420	Soil	MKEMTANNNDDFDRFRTGAAKYAAYLETPEGRLRLDLAF
Ga0210391_110416671	3300021433	Soil	MKETNVSDDDDFERFRTGADQYAAYLETPEGRLRLDLAFA
Ga0213879_100439801	3300021439	Bulk Soil	MIANPDSERFRSGAEKYAAYLETTEGRLRLDLTFANVQEFLPKT
Ga0210398_110601721	3300021477	Soil	MQMTAKADSEGFQSGANKYADYLETPEGRLRSDLAFTNL
Ga0126371_125564822	3300021560	Tropical Forest Soil	MKIGAQADNRFQADAGKYAAYLQTPEGRLRLDLAFAN
Ga0242669_10409932	3300022528	Soil	MKGRTANADFERFLTGAAKYAAYLETPEGRLRLDLAF
Ga0224551_10081023	3300023259	Soil	MKEMTANDDFERFRTGAAKYAAYLETPEGKLRLDLTFANLQ
Ga0247680_10199401	3300024246	Soil	MKEMTANDDCERFRTGAAKYAAYLETPEGQLRLDLAFA
Ga0247676_10741432	3300024249	Soil	MTTNSSGERFLTGAAQYAAYLETPEGRLRLDLTFANV
Ga0207642_103303521	3300025899	Miscanthus Rhizosphere	MKEMTANDDCERFRTGAAKYAAYLETPEGQLRLDLALANLQDFLPG
Ga0207680_107952411	3300025903	Switchgrass Rhizosphere	MKEMTANDDCERFRTGAAKYAAYLETPEGRLRLDLALANLQDFLPRATRS
Ga0207645_102633871	3300025907	Miscanthus Rhizosphere	MKEMTANDDCERFRTGAAKYAAYLETPEGQLRLDLALANLQDFLPRATRSLR
Ga0207657_102911351	3300025919	Corn Rhizosphere	MKEMTANDDCERFRTGAAKYAAYLETPEGQLRLDLAL
Ga0207669_113438151	3300025937	Miscanthus Rhizosphere	MKEMTANDDCERFRTGAAKYAAYLETPEGRLRLDLALANLQDF
Ga0208416_10151812	3300026004	Rice Paddy Soil	MNKVTANADRDRFQSEADKYAAYLETAEGRLRLDLPLANLQEFLQLPRDES
Ga0208649_10216181	3300026022	Rice Paddy Soil	MKNGSANADSERFQSEADKYAAYLETPEGGLRLDLAFVNLQEFLPQDTASLRAL
Ga0209472_12676071	3300026323	Soil	MQMTAKPASEGFQSGADKYAAYLEILEGRLRCGLVFANLQDFLVLPQSRRSL
Ga0257158_11019761	3300026515	Soil	MKMTAKADSERFQSGANEYAVYLDTPEGRLRSDLAF
Ga0209056_100449711	3300026538	Soil	MQMTAKPASEGFQSGADKYAAYLEILEGRLRCGLVF
Ga0209156_102015681	3300026547	Soil	MNKMTASADSECFLSGSEKYAAYLETPEGRLRLDLAF
Ga0179587_101619491	3300026557	Vadose Zone Soil	MQMTAKPDSDRFQSGADKYAAYLETPEGRLRCGLAFAYLQDFLVLPQSRRSLRG
Ga0207824_10337151	3300026990	Tropical Forest Soil	MVTKSDDERFQSGAQDYALYLKTPEGRLRVDLLFT
Ga0208098_10189282	3300027172	Forest Soil	MVAHTDSERFQSDAEKYAAYLETPEGRLRIDLAFAN
Ga0208199_11250421	3300027497	Peatlands Soil	MKMSAKADSERFQSDANKYAVYLETPEGRLRSDLA
Ga0208043_10609052	3300027570	Peatlands Soil	MSECGMKMKMTANVDKERFQSGSEKYAAYLETPEG
Ga0209003_11057231	3300027576	Forest Soil	MQMTAKADSGRFQSGAGKYAAYLETPEGRLRSDLALANLQDFLPLPQTEL
Ga0209422_11285972	3300027629	Forest Soil	MKMTAKADSERFQSGANEYAVYLDTPEGRLRSDLAFRNLQDFLPQQDEK
Ga0209799_11362161	3300027654	Tropical Forest Soil	MNMMAKADRNRFQTDAGKYAAYLETPEGRLRLDLAIANLQEFLT
Ga0209799_11540591	3300027654	Tropical Forest Soil	MKTSSQTDNRFQHDAGKYAAYLESPEGRLRLDLAF
Ga0207826_11786471	3300027680	Tropical Forest Soil	MSSNLDTERFRSGVEKYAAFLETFEGRLRFDLTLATLQEFLPQVSRPLC
Ga0209446_10427334	3300027698	Bog Forest Soil	MTIASNDERFQHGAQDYAAYLQSPEGRWRADLALANLQDFLPIPQA
Ga0209448_102845611	3300027783	Bog Forest Soil	MFASGDSERFQRGANKYASYLETPEGRLRSDLALANL
Ga0209380_101955702	3300027889	Soil	MNTANDDPERFQREAHEYAAYLETPEGRLRLDLPFAN
Ga0209415_102634562	3300027905	Peatlands Soil	MSECGMKMKMTANVDKERFQSGSEKYAAYLETPEGRLRLDLAF
Ga0209168_101443801	3300027986	Surface Soil	MKPTTGNTGAERFQSGADKYAAYLDTTEGRLRLDLSLANLQEF
Ga0265354_10063072	3300028016	Rhizosphere	MKEMTANDDADFERFRTGAAKYAAYLETPEGRLRLDLAFAN
Ga0311352_109000671	3300029944	Palsa	MSAGPGSERFQSGANKYAAYLKTPGGRLRSDLAFAN
Ga0170824_1040719531	3300031231	Forest Soil	MKKMITADRERFQRGAQAYAAYLEKPEGRLRLDLA
Ga0302324_10002766615	3300031236	Palsa	MNMSAGDGSERFQSGANKYAAYLETPGGRLRSDLAFAN
Ga0170818_1088221022	3300031474	Forest Soil	MKEISSSNDLERFRGGAAKYAAYLETPEGRLRLDLAFVNLQ
Ga0310686_1003755731	3300031708	Soil	MKQMTANDDFERFRTGVAKYAAYLETPEGRLRLDLA
Ga0307468_1025721021	3300031740	Hardwood Forest Soil	MKEMTANDDFERFRTGAAKYAAYLETPEGRLRLDLAFAYLQDFLPQATRS
Ga0307475_104997811	3300031754	Hardwood Forest Soil	MQMTAKPDSDRFQSGADKYAAYLETPEGRLRCGQAFANLQDFLVLPRSRRS
Ga0307475_115397141	3300031754	Hardwood Forest Soil	MKKLTANADSERFQSEADKYATYLETPEGRLRLDLPFSNLQEFLA
Ga0307478_113385692	3300031823	Hardwood Forest Soil	MKETTANADFERFQTGASKYAAYLETPEGRLRLDLGLANLQEFLPQA
Ga0306926_116630513	3300031954	Soil	MSTIPRSDSERFRSDAQKYAAYLETPEGRLRLDLALANVR
Ga0307479_117261113	3300031962	Hardwood Forest Soil	MKEITANDDFERFRTGAAKYAAYLETPEGQLRLDLAFANLQ
Ga0306924_112895642	3300032076	Soil	MTATADNERFRSGADKYAAYLESSEGRLRLDLTFANLQ
Ga0306920_1000830318	3300032261	Soil	MKEITADDDFERFRTGAAKYAAYLATPEGRLRSDLAFAN
Ga0335072_102596251	3300032898	Soil	MKKTTHLDADRFRRDAEKYAEYLKTPEGRLRLELAFVNLQ
Ga0335073_121459711	3300033134	Soil	MEKTTTHSEETFQSGADKYAAYLETPEGRLRVDLGFANLQEFL
Ga0326728_111706962	3300033402	Peat Soil	MKMNANTDREPFRSGAHDYAAYLETPEGRLRSDLAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061931

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences