Metagenome / Metatranscriptome Family F061934

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061934
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	62 residues
Representative Sequence	GSLYIVTGLARRLTAAGLRWSAGRPARRLLAAVAGLAALAGLAAFWTMQGQFRGW
Number of Associated Samples	115
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.76 %
% of genes near scaffold ends (potentially truncated)	95.42 %
% of genes from short scaffolds (< 2000 bps)	87.79 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (69.466 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.191 % of family members)
Environment Ontology (ENVO)	Unclassified (20.611 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.275 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.42% β-sheet: 0.00% Coil/Unstructured: 44.58%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF00296	Bac_luciferase	11.45
PF00106	adh_short	5.34
PF13561	adh_short_C2	5.34
PF13614	AAA_31	2.29
PF00708	Acylphosphatase	1.53
PF01656	CbiA	1.53
PF00589	Phage_integrase	1.53
PF02803	Thiolase_C	1.53
PF13649	Methyltransf_25	1.53
PF04464	Glyphos_transf	1.53
PF04307	YdjM	0.76
PF05016	ParE_toxin	0.76
PF00440	TetR_N	0.76
PF02720	DUF222	0.76
PF08669	GCV_T_C	0.76
PF00378	ECH_1	0.76
PF13361	UvrD_C	0.76
PF02776	TPP_enzyme_N	0.76
PF13560	HTH_31	0.76
PF13229	Beta_helix	0.76
PF00484	Pro_CA	0.76
PF02518	HATPase_c	0.76
PF08241	Methyltransf_11	0.76
PF07690	MFS_1	0.76
PF03807	F420_oxidored	0.76
PF01844	HNH	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	11.45
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	1.53
COG1887	CDP-glycerol glycerophosphotransferase, TagB/SpsB family	Cell wall/membrane/envelope biogenesis [M]	1.53
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.76
COG1988	Membrane-bound metal-dependent hydrolase YbcI, DUF457 family	General function prediction only [R]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.47 %
Unclassified	root	N/A	30.53 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.47 %
Unclassified	root	N/A	30.53 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.47 %
Unclassified	root	N/A	30.53 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	59.54 %
Unclassified	root	N/A	30.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.53 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	48.85 %
Unclassified	root	N/A	30.53 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.76 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	36.64 %
Unclassified	root	N/A	30.53 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.53 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	6.11 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	2.29 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.29 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.29 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.76 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.76 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.76 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.76 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.53 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	4.58 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2.29 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.29 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.29 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1.53 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.76 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.76 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.76 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.76 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.53 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	4.58 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.29 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.29 %
Microbispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora	1.53 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.76 %
Saccharothrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix	0.76 %
Tetrasphaera	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Tetrasphaera	0.76 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.76 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.76 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.53 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	4.58 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.29 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.29 %
Microbispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora	1.53 %
Candidatus Frankia meridionalis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Candidatus Frankia meridionalis	0.76 %
Saccharothrix variisporea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → Saccharothrix variisporea	0.76 %
Tetrasphaera	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Tetrasphaera	0.76 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.76 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.76 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001623\|JGI20269J16352_10048	Not Available	871	Open in IMG/M
3300001632\|JGI20235J16296_1002629	Not Available	792	Open in IMG/M
3300005172\|Ga0066683_10542950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	709	Open in IMG/M
3300005329\|Ga0070683_102130905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	538	Open in IMG/M
3300005332\|Ga0066388_105642598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	633	Open in IMG/M
3300005337\|Ga0070682_101213409	Not Available	637	Open in IMG/M
3300005435\|Ga0070714_100036334	All Organisms → cellular organisms → Bacteria	4131	Open in IMG/M
3300005435\|Ga0070714_100594326	Not Available	1062	Open in IMG/M
3300005436\|Ga0070713_100249556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1618	Open in IMG/M
3300005437\|Ga0070710_10991498	Not Available	611	Open in IMG/M
3300005456\|Ga0070678_102203517	Not Available	523	Open in IMG/M
3300005538\|Ga0070731_10582002	Not Available	745	Open in IMG/M
3300005564\|Ga0070664_102310608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	510	Open in IMG/M
3300005764\|Ga0066903_101384765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1320	Open in IMG/M
3300005764\|Ga0066903_101682633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1207	Open in IMG/M
3300005905\|Ga0075269_10070844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	631	Open in IMG/M
3300005921\|Ga0070766_11135292	Not Available	540	Open in IMG/M
3300005995\|Ga0066790_10289028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	699	Open in IMG/M
3300006028\|Ga0070717_11065069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	736	Open in IMG/M
3300006028\|Ga0070717_11764948	Not Available	559	Open in IMG/M
3300006237\|Ga0097621_100511269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1089	Open in IMG/M
3300006755\|Ga0079222_10054347	Not Available	1880	Open in IMG/M
3300006852\|Ga0075433_10062758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3255	Open in IMG/M
3300006903\|Ga0075426_10416776	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300006954\|Ga0079219_10016922	Not Available	2612	Open in IMG/M
3300006954\|Ga0079219_11429135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	620	Open in IMG/M
3300007076\|Ga0075435_101325233	All Organisms → cellular organisms → Bacteria → Terrabacteria group	631	Open in IMG/M
3300009101\|Ga0105247_10014045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4803	Open in IMG/M
3300009137\|Ga0066709_101323498	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1054	Open in IMG/M
3300009521\|Ga0116222_1158283	Not Available	975	Open in IMG/M
3300009545\|Ga0105237_12175984	Not Available	564	Open in IMG/M
3300010049\|Ga0123356_13579361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	538	Open in IMG/M
3300010323\|Ga0134086_10140326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	877	Open in IMG/M
3300010333\|Ga0134080_10609845	All Organisms → cellular organisms → Bacteria → Terrabacteria group	532	Open in IMG/M
3300010358\|Ga0126370_12404993	All Organisms → cellular organisms → Bacteria → Terrabacteria group	523	Open in IMG/M
3300010360\|Ga0126372_12401560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300010371\|Ga0134125_12910485	Not Available	520	Open in IMG/M
3300010376\|Ga0126381_100991939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1211	Open in IMG/M
3300010399\|Ga0134127_11455250	All Organisms → cellular organisms → Bacteria → Terrabacteria group	757	Open in IMG/M
3300010863\|Ga0124850_1058861	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1191	Open in IMG/M
3300010863\|Ga0124850_1059500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1183	Open in IMG/M
3300010867\|Ga0126347_1079344	Not Available	568	Open in IMG/M
3300010877\|Ga0126356_11347834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1167	Open in IMG/M
3300012198\|Ga0137364_10994220	Not Available	634	Open in IMG/M
3300012199\|Ga0137383_10528828	All Organisms → cellular organisms → Bacteria → Terrabacteria group	863	Open in IMG/M
3300012200\|Ga0137382_10267665	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1187	Open in IMG/M
3300012359\|Ga0137385_11541590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	528	Open in IMG/M
3300012513\|Ga0157326_1080930	Not Available	531	Open in IMG/M
3300012532\|Ga0137373_10103222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2487	Open in IMG/M
3300012961\|Ga0164302_10620450	Not Available	787	Open in IMG/M
3300014968\|Ga0157379_12087383	Not Available	561	Open in IMG/M
3300016270\|Ga0182036_10563732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	909	Open in IMG/M
3300016341\|Ga0182035_11357988	All Organisms → cellular organisms → Bacteria → Terrabacteria group	637	Open in IMG/M
3300016371\|Ga0182034_11577617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	576	Open in IMG/M
3300016422\|Ga0182039_11421385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	630	Open in IMG/M
3300017926\|Ga0187807_1034671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1564	Open in IMG/M
3300017926\|Ga0187807_1199896	Not Available	647	Open in IMG/M
3300017932\|Ga0187814_10223492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	710	Open in IMG/M
3300017942\|Ga0187808_10236194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	816	Open in IMG/M
3300017999\|Ga0187767_10287402	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300018043\|Ga0187887_10251704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1046	Open in IMG/M
3300020580\|Ga0210403_11364155	Not Available	539	Open in IMG/M
3300021168\|Ga0210406_10674467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	799	Open in IMG/M
3300021170\|Ga0210400_11520510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	530	Open in IMG/M
3300021181\|Ga0210388_10137614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2115	Open in IMG/M
3300021377\|Ga0213874_10017787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Candidatus Frankia meridionalis	1912	Open in IMG/M
3300021402\|Ga0210385_10281181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1230	Open in IMG/M
3300021404\|Ga0210389_10046504	All Organisms → cellular organisms → Bacteria	3330	Open in IMG/M
3300021404\|Ga0210389_10425632	Not Available	1044	Open in IMG/M
3300021404\|Ga0210389_10619652	Not Available	850	Open in IMG/M
3300021404\|Ga0210389_11078585	Not Available	621	Open in IMG/M
3300021406\|Ga0210386_10994607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	715	Open in IMG/M
3300021407\|Ga0210383_10372359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1232	Open in IMG/M
3300021407\|Ga0210383_11695184	Not Available	518	Open in IMG/M
3300021478\|Ga0210402_10012921	All Organisms → cellular organisms → Bacteria	7172	Open in IMG/M
3300024245\|Ga0247677_1055003	Not Available	582	Open in IMG/M
3300025906\|Ga0207699_10564786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	826	Open in IMG/M
3300025916\|Ga0207663_10162637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora	1578	Open in IMG/M
3300025928\|Ga0207700_10515735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1059	Open in IMG/M
3300025929\|Ga0207664_10030529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4116	Open in IMG/M
3300026121\|Ga0207683_11836066	Not Available	555	Open in IMG/M
3300027029\|Ga0208731_1018016	Not Available	751	Open in IMG/M
3300027110\|Ga0208488_1004798	All Organisms → cellular organisms → Bacteria	2752	Open in IMG/M
3300027604\|Ga0208324_1139707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	663	Open in IMG/M
3300027696\|Ga0208696_1187267	Not Available	660	Open in IMG/M
3300027775\|Ga0209177_10014029	Not Available	1861	Open in IMG/M
3300027817\|Ga0209112_10113893	All Organisms → cellular organisms → Bacteria → Terrabacteria group	883	Open in IMG/M
3300027908\|Ga0209006_10121156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2310	Open in IMG/M
3300028906\|Ga0308309_10317027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1322	Open in IMG/M
3300029943\|Ga0311340_10686263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	880	Open in IMG/M
3300030490\|Ga0302184_10181206	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300030520\|Ga0311372_11645962	Not Available	778	Open in IMG/M
3300030617\|Ga0311356_10747745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	932	Open in IMG/M
3300031027\|Ga0302308_10431754	Not Available	786	Open in IMG/M
3300031028\|Ga0302180_10167353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1206	Open in IMG/M
3300031236\|Ga0302324_100030970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Tetrasphaera	10101	Open in IMG/M
3300031640\|Ga0318555_10118277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1407	Open in IMG/M
3300031718\|Ga0307474_10095287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora	2223	Open in IMG/M
3300031723\|Ga0318493_10435285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	720	Open in IMG/M
3300031744\|Ga0306918_10768236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	753	Open in IMG/M
3300031748\|Ga0318492_10245100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	925	Open in IMG/M
3300031768\|Ga0318509_10751961	Not Available	540	Open in IMG/M
3300031770\|Ga0318521_10123446	Not Available	1449	Open in IMG/M
3300031779\|Ga0318566_10206947	All Organisms → cellular organisms → Bacteria → Terrabacteria group	974	Open in IMG/M
3300031781\|Ga0318547_10360102	All Organisms → cellular organisms → Bacteria → Terrabacteria group	889	Open in IMG/M
3300031797\|Ga0318550_10295344	Not Available	786	Open in IMG/M
3300031798\|Ga0318523_10432735	Not Available	653	Open in IMG/M
3300031821\|Ga0318567_10538073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	663	Open in IMG/M
3300031879\|Ga0306919_10551641	All Organisms → cellular organisms → Bacteria → Terrabacteria group	889	Open in IMG/M
3300031879\|Ga0306919_11105994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	604	Open in IMG/M
3300031910\|Ga0306923_11837104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	621	Open in IMG/M
3300031947\|Ga0310909_10303235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1339	Open in IMG/M
3300032009\|Ga0318563_10264529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	930	Open in IMG/M
3300032059\|Ga0318533_11364391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	518	Open in IMG/M
3300032063\|Ga0318504_10421580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	637	Open in IMG/M
3300032063\|Ga0318504_10664879	Not Available	501	Open in IMG/M
3300032066\|Ga0318514_10462498	All Organisms → cellular organisms → Bacteria → Terrabacteria group	674	Open in IMG/M
3300032066\|Ga0318514_10684563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	545	Open in IMG/M
3300032068\|Ga0318553_10125122	All Organisms → cellular organisms → Bacteria	1323	Open in IMG/M
3300032089\|Ga0318525_10740452	Not Available	500	Open in IMG/M
3300032770\|Ga0335085_10112660	All Organisms → cellular organisms → Bacteria	3488	Open in IMG/M
3300032828\|Ga0335080_10124320	All Organisms → cellular organisms → Bacteria	2862	Open in IMG/M
3300032828\|Ga0335080_11290126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	730	Open in IMG/M
3300032829\|Ga0335070_10581039	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300032892\|Ga0335081_10163203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3159	Open in IMG/M
3300032896\|Ga0335075_10396700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1470	Open in IMG/M
3300032896\|Ga0335075_10681364	Not Available	994	Open in IMG/M
3300033134\|Ga0335073_10916388	Not Available	920	Open in IMG/M
3300033158\|Ga0335077_10267990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1884	Open in IMG/M
3300033158\|Ga0335077_11093006	All Organisms → cellular organisms → Bacteria → Terrabacteria group	788	Open in IMG/M
3300034124\|Ga0370483_0254272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → Saccharothrix variisporea	602	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.08%
Host-Associated	Host-Associated	9.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.26%
Plants	Host-Associated → Plants	9.16%
Aquatic	Environmental → Aquatic	3.82%
Arthropoda	Host-Associated → Arthropoda	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.92%
Peat	Environmental → Terrestrial → Peat	5.34%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.34%
Freshwater	Environmental → Aquatic → Freshwater	3.82%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.29%
Roots	Host-Associated → Plants → Roots	1.53%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.14%
Loam	Environmental → Terrestrial → Soil → Loam	19.08%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.58%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.82%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.53%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.76%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.76%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.76%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.06%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.16%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.58%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.05%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.05%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.53%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.76%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.76%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.76%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.76%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.19%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	7.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.11%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.34%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.58%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.82%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.05%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.05%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.29%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.29%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.29%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.53%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.53%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.53%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.53%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.76%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.76%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.76%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.76%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.76%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.76%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001623	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF035	Environmental	Open in IMG/M
3300001632	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005905	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_105	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010877	Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012513	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300024245	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027029	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF045 (SPAdes)	Environmental	Open in IMG/M
3300027110	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20269J16352_100483	3300001623	Forest Soil	GSLYITARLARRVAALGRRWSVGRPVRRRLAAAAGLAVLTGLAAFWTMQGQFRGW*
JGI20235J16296_10026291	3300001632	Forest Soil	GAGSLYITARLARRVAALGRRWSVGRPVRRRLAAAAGLAVLTGLAAFWTMQGQFRGW*
Ga0066683_105429501	3300005172	Soil	GHDYAMAAVDAIGVALLALSLAGSLYIVIGLARRLATAGLRWSVGQPARRLLVALAGLAGMAALVAFWAMQGQFRGW*
Ga0070683_1021309051	3300005329	Corn Rhizosphere	ALDVVGIALVTLSLAGSLYIIIGLARRLAITGLRWSAGHPARRLLAATAGLAVLAALAAFWGTQGQFHGW*
Ga0066388_1056425982	3300005332	Tropical Forest Soil	LALSLAGSLYIVIGLARRLMALGLRWSAGHPARRLLAAVAGLAGMAVLAAFWGAQGQFQGW*
Ga0070682_1012134091	3300005337	Corn Rhizosphere	IIIGLARRLAITGLRWSAGHPARRLLAATAGLAVLAALAAFWGTQGQFHGW*
Ga0070714_1000363341	3300005435	Agricultural Soil	LVILPGAGSLYVAVLLARQVTTLARRWSAARPVRRLPAAGTGLAVIAALAAFWTLQGQFRGW*
Ga0070714_1005943264	3300005435	Agricultural Soil	LWNSASLQAHLMTAAVHGHRYAMAAVDAISIALVTLSLAGSLYVVTGLARRLTVLGRRWSAGRPARRLLAGAAGLAVLAGLTAFWTLQGQFRGW*
Ga0070713_1002495562	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VAAIDAIGVALLALSLAGSLPIVTGPARRAAATGLRWSAGRLLIVVAGLACVTGFAAFWILRS*
Ga0070710_109914981	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	GSLYVAVLLARQVTTLARRWSAARPVRRLLAAGTGLAVITALAAFWTLQGQFRGW*
Ga0070678_1022035171	3300005456	Miscanthus Rhizosphere	LARRVATVGLRWSAGRPARRRRVAAAGLAALAGLAAFWTLQGQFRGW*
Ga0070731_105820022	3300005538	Surface Soil	LAGSLYIVTGLARRLTALARRWSAGRPARRLLAGAAGLAALAGLAAFWTLQGQFRGW*
Ga0070664_1023106081	3300005564	Corn Rhizosphere	ALVTLSLAGLLYIIIGLARRLAITGLRWSAGHPARRLLAATAGLAVLAALAAFWGTQGQFHGW*
Ga0066903_1013847653	3300005764	Tropical Forest Soil	GSLYIVIGLARRLTALGLRWSAGHPARRLLVALAGLAGMAVLAAFWSMQGQFRGW*
Ga0066903_1016826333	3300005764	Tropical Forest Soil	GSLYIVIGLARRLTALGLRWSAGHPARRLLVALAGLAGMALLAAFWGMQGQFQGW*
Ga0075269_100708441	3300005905	Rice Paddy Soil	ALSLAGTLYILTGLARRLAVAGLRWSAGRPARRGLAAVAGLAVLAAMAGIWTAQGQFHGW
Ga0070766_111352922	3300005921	Soil	AGSLYILTGLARRAVITGLRWSAGRPARGVLAAVAGLAGLAALAATWTAQGQFHGW*
Ga0066790_102890282	3300005995	Soil	AAVISHRYATAVIDVLGFALLALSFAGSLYITIGLTRRVATAGLRWSAGKRGRRLLLAVAGLACLLGLASFWTMQGQFRGW*
Ga0070717_110650692	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	TLSLAGSLYIIIGLARRLAVTGLRWSAGHPARRLLAATAGLAVLAALAAFWGTQGQFHGW
Ga0070717_117649481	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	AGSLYVVTGLARRLTVLGRRWSAGRPARRLLAGAAGLAVLAGLAAFWILQGQFRGW*
Ga0097621_1005112691	3300006237	Miscanthus Rhizosphere	AAIGVVLLALSLAGSLYIVIGLARRLATAGLCWSTGHPARRLLATVAGLAGLAALAAFWAMQGQFRGW*
Ga0079222_100543474	3300006755	Agricultural Soil	VALSLAGSLYIVIRLAQRVATVGLRWSAGRPARRLLAAGTGLAVMAALAAFWTLQGQFRGW*
Ga0075433_100627584	3300006852	Populus Rhizosphere	GSLYIVIGLARRLATAGLCWSTGHPARRLLATVAGLAGLAALAAFWAMQGQFRGW*
Ga0075426_104167761	3300006903	Populus Rhizosphere	YIVTGLARRAAAAGLRWSAGRPARRLLVAVAGLACVTGLAAFWIMGGQFRGW*
Ga0079219_100169224	3300006954	Agricultural Soil	AVDIALVTLSLAGSLYIVTGLARRLTALGRRWSAGRPARRLLTTGAGLAAAAGLAAFWIMQGQFRGW*
Ga0079219_114291352	3300006954	Agricultural Soil	LLALSLAGSLYIVIGLARRLAAAGLRWSTGHPARRLLATVAGLAGLAALAAFWAVQGQFRGW*
Ga0075435_1013252331	3300007076	Populus Rhizosphere	SLAGSLYIVIGLARRLATAGLRWSTGHPARRLLATVAGLAGLAALAAFWAMQGQFRGW*
Ga0105247_100140459	3300009101	Switchgrass Rhizosphere	AGSLYVVTGLARRLTVLGRRWSAGRPARRLLAGAVGLAVLAGLAAFWTLQGQFRGW*
Ga0066709_1013234983	3300009137	Grasslands Soil	PLALSRAGSLYLVIGLARRLATAGLRWSVGQPARRLLVALAGLAGMAALVAFWAMQGQFRGW*
Ga0116222_11582831	3300009521	Peatlands Soil	YIVTGLARRLTAAGLRWSAGRPARRLLAAVAGLAALAGLAAFWTMQGQFRGW*
Ga0105237_121759841	3300009545	Corn Rhizosphere	IGIALVTLSLAGSLYIVTGLARRLTTLGRRWSAGRPARRLLAGAAGLAALAGLAAFWILQGQFRGW*
Ga0123356_135793612	3300010049	Termite Gut	SLAGSLYIVTGLARRLATAGLRWSAGRPARRVLATVAGLALLAALAAVWTAQGQLHGW*
Ga0134086_101403263	3300010323	Grasslands Soil	SLYLLAGLARRMAVLGLRWSAGRPARRLLAAGTGLAVMAALAAFWTLQGQFRGW*
Ga0134080_106098452	3300010333	Grasslands Soil	HDYAMAAVDAIGVALLALSLAGSLYIVIGLARRLATAGLRWSVGQPARRLLVALAGLAGMAALVAFWAMQGQFRGW*
Ga0126370_124049932	3300010358	Tropical Forest Soil	VALLTLSLAGSLYVAIGLARRLATTGLRWSAGRPARRLLVAVAGLAGMTALAAFWNLQGQLHGW*
Ga0126372_124015602	3300010360	Tropical Forest Soil	IVTGLARRAAAAGLRWSAGRPARRLLVVVAGLACGTGLAAFWILRGQFRGW*
Ga0134125_129104853	3300010371	Terrestrial Soil	GLARRLIVLGRRWSAGRPARRLLAGAAGLAVLAGLAAFWILQGQFRGW*
Ga0126381_1009919392	3300010376	Tropical Forest Soil	LLALSLAGSLYIVIGLARRLATVALPWSRGRPARRLLAALAGLAGMAALAAFWAVQGQFRGW*
Ga0134127_114552502	3300010399	Terrestrial Soil	GVVLLALSLAGSLYIVLGLARRLATAGLRWSTGHPARRLLATVAGLAGLAALAAFWAMQGQFRGW*
Ga0124850_10588613	3300010863	Tropical Forest Soil	ALLALSLAGSLYVVIGLARRLIAAGLRWSAGRRARRLLVAVAALACVTTLAAFWSVQGQFRGW*
Ga0124850_10595001	3300010863	Tropical Forest Soil	SLAGSLYVVIGLARRLIAAGLRWSAGRRARRLLVAVAALACVTTLAAFWLAAFWSVQGQFRGW*
Ga0126347_10793441	3300010867	Boreal Forest Soil	MAVIDALGFALLALSFAGSLYITIGLARRLATTGLRWSAGQRSRRLLLAVAGLACLMGLASFWTVQGQFRGW*
Ga0126356_113478342	3300010877	Boreal Forest Soil	LAGSLYIVAGLTRRLTTAGLRWSAGRPRRRFLVAVAGAACLALLASFWTTQGQFRGW*
Ga0137364_109942202	3300012198	Vadose Zone Soil	GAGSLYIAARLARQVATLGRRWSAGRPARRLLAAGTGLAVMAALAAFWTLQGQFRGW*
Ga0137383_105288282	3300012199	Vadose Zone Soil	LARRLATAGLRWSVGQPARRLLVALAGLAGMAALAAFWAVQGQFRGW*
Ga0137382_102676653	3300012200	Vadose Zone Soil	YIVIGLARRLATAGLRWSAGRPARRLLAALAGLAVMAALATFWAMQGQFRGW*
Ga0137385_115415902	3300012359	Vadose Zone Soil	AAVDAVGFALLALSLAGSLYITAGLVRRLAATGLRWSAGQPGRRVLVTVAGLACLGGLASFWALRGQFRGW*
Ga0157326_10809303	3300012513	Arabidopsis Rhizosphere	LYIVTGLARRLTVLGRRWSAGRPARRLLVGAAGLAVLAGLAAFWTLQGEFRGW*
Ga0137373_101032222	3300012532	Vadose Zone Soil	LLALSLAGSLYITAGLVRRLAATGLRWSAGQPGRRVLVTVAGLACLGGLASFWALRGQFRGW*
Ga0164302_106204504	3300012961	Soil	GLARRLPVLARRWSAGRPARRLLAGAAGLAALAALAAFWTLQGQFRGW*
Ga0157379_120873833	3300014968	Switchgrass Rhizosphere	AGSLYVVTGLARRLTALGRRWSAGRPARRLLAGAAGLAVLAGLTAFWTLQGQFRGW*
Ga0182036_105637322	3300016270	Soil	LLALSLAGSLYVVIGLARRLATLGLRWSAGRPARRLVVALAGLAGMAAIGSIWTMQGQFLGW
Ga0182035_113579882	3300016341	Soil	AGSLYVVIGLARRLATLGLRWSAGRPGRRLVAALAGLAGMAAIGTVWTMQGQFLGW
Ga0182034_115776171	3300016371	Soil	LSLAGSLYIVVGLARRLAAAGLRWSAGHRARRLLVAVAGLACVTVLAAFWSVQGQFRGW
Ga0182039_114213851	3300016422	Soil	LYIVVGLARRLAAAGLRWSAGHRARRLLVAVAGLACATMLATFWSVQGQFRGW
Ga0187807_10346712	3300017926	Freshwater Sediment	ALVTLSLASSLYVVAGLARRLTTVGLRWSAGRPRRRLLVAAAGLACLMALATFWTVQGQFRGW
Ga0187807_11998963	3300017926	Freshwater Sediment	VAGHQYAAAAVDAVGVVLVILPGAGTLYVVARLARRIITLGRRWSAGRPARRLLATGTGLAGRPAALAAFWTIQGQFRGW
Ga0187814_102234921	3300017932	Freshwater Sediment	YVVAGLARRLTTVGLRWSAGRPRRRLLVAAAGLACLMALATFWTVQGQFRGW
Ga0187808_102361942	3300017942	Freshwater Sediment	AAVGAIGVALLALSLAGSLYAVTGLTRRLVIVGLRWSAGRPGRRFLAVAAALACVTALATFWLWQGQFRGW
Ga0187767_102874022	3300017999	Tropical Peatland	ANRQAHLMSIAANGHRYPMAAADVIGIALLALSLAGSLYVVIGLARRLATAGLRWSVGHPARRLLVAVVGLACVTALAAFWDIQGQFHGW
Ga0187887_102517042	3300018043	Peatland	MKTGATADSLALVAPSLAGSLYVVTGLVRRLVTASLRWSAGRPARRFLAAAAGLTVLTALAAFWTVRGQFRGW
Ga0210403_113641552	3300020580	Soil	LSLAGSLYVVTGLARRLTALGRRWSAGRPARRLLAGAAGLAVLAALAGFWTLQGQFRGW
Ga0210406_106744672	3300021168	Soil	YILIGLARRLATAGLRWSAGQPARRVLATVAGLAGLAALAVFWTAQGQFHGW
Ga0210400_115205101	3300021170	Soil	GTLYIATGLARRAVTLGLRWSAGRPARRLVAAVAGLAGAATLATVWTVQGGFHGW
Ga0210388_101376141	3300021181	Soil	LGIALVAMSLAGSCYILIGLARRLATAGLRWSAGQPARRVLATVAGLAGLAALAVFWTAQGQFHGW
Ga0213874_100177871	3300021377	Plant Roots	MAAVYAINIAFVALSLGGTLYIATGLARRLTALGRHWSAGRPARRLLAAGAGLAVMAGLAAFWTIQGQFRGW
Ga0210385_102811813	3300021402	Soil	LSFAGSLYITIGLARRLTTAGLRWSAGRRGRRLLLAVASVACLMGLASLWTVQGQFRGW
Ga0210389_100465046	3300021404	Soil	TGLARRLTALARRWSAGRPARRLLAGAAGLAALAGLAAFWTLQGQFRGW
Ga0210389_104256322	3300021404	Soil	VYIVTGLARRLAVAGLRWSAGRPARRLMAAAAALACVTTLAAFWTLQGQFRGW
Ga0210389_106196523	3300021404	Soil	AGSLYVVTGLARRLTALGLRWSAGRPARRLLAGAAGLAVLAGLAIFWTLQGQFHGW
Ga0210389_110785851	3300021404	Soil	LSLAGALYIVAGLTRRLTTAGLRWSAGRPRRRFLVAVAGAACLALLASFWTAQGQFRGW
Ga0210386_109946071	3300021406	Soil	AVDAIGVVLVALPGAGGLYIVIGLARRVAALGRRWSAGRPGPRLLAVGTGLAVMATLAVFWTIQGQFRGW
Ga0210383_103723591	3300021407	Soil	LYILTGLARRAVITGLRWSAGRPARGVLAAVAGLAGLAALAATWTAQGQFHGW
Ga0210383_116951842	3300021407	Soil	VGSALVTLSLAGSLYIVTGLARRLTALGRRWSAGRPARRLLAGAAGLAVLAALAAFWTLQGEFRGW
Ga0210402_100129211	3300021478	Soil	LSLAGSLYIVTGLARRLTVLGLRWSAGRPARRLLAGAAGLAVLAGLAIFWTLQGQFHGW
Ga0247677_10550033	3300024245	Soil	LAGSLYVVTGLARRLTALGRRWSAGRPARRLLAGAVGLAVLAGLAAFWTLQGQFRGW
Ga0207699_105647861	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	AAIGVVLLALSLAGSLYIVLGLARRVATAGLRWSTGHPARRLLATVAGLAGLAALAAFWAMQGQFRGW
Ga0207663_101626371	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	GHHYAAAAVDAIDVVLVILPGAGSLYVAVLLARQVTTLARRWSAARPVRRLLAAGTGLAVITALAAFWTLQGQFRGW
Ga0207700_105157353	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	SLYIVTGLARRAAAAGLRWSAGDPGRRLLAGTAGLAALTALAAFWTAQGQFAGW
Ga0207664_100305299	3300025929	Agricultural Soil	AIDVVLVILPGAGSLYVAVLLARQVTTLARRWSAARPVRRLPAAGTGLAVIAALAAFWTLQGQFRGW
Ga0207683_118360662	3300026121	Miscanthus Rhizosphere	ALDVVGIALVTLSLAGSLYIIIGLARRLAITGLRWSAGHPARRLLAATAGLAVLAALAAFWGTQGQFHGW
Ga0208731_10180162	3300027029	Forest Soil	ALVILSLAGSLYIVTGLARRLTAASRRWSAGRPGRRLLAAAAGLAVLTGLAAFWTAQGQFRGW
Ga0208488_10047981	3300027110	Forest Soil	LPGAGSLYITARLARRVAALGRRWSVGRPVRRRLAAAAGLAVLTGLAAFWTMQGQFRGW
Ga0208324_11397071	3300027604	Peatlands Soil	LVALSLAGSLYIVTGLARRLTALGRRWSAGRPARRLLTAAAGLAVLTGLAAFWTTQGQFRGW
Ga0208696_11872673	3300027696	Peatlands Soil	GSLYIVTGLARRLTAAGLRWSAGRPARRLLAAVAGLAALAGLAAFWTMQGQFRGW
Ga0209177_100140293	3300027775	Agricultural Soil	TLSLAGSLYIVTGLARRLTALGRRWSAGRPARRLLTTGAGLAAAAGLAAFWIMQGQFRGW
Ga0209112_101138932	3300027817	Forest Soil	IVGSLLVTAGLARRLAAGGLRWSAGRPGRRLLVVAIGLAVLAGLGTLWTVQGQLAGW
Ga0209006_101211561	3300027908	Forest Soil	TTALAGHRYTAAAADAISVALVALSLTGSLYIVTGLARQLTTTGLRWSTGRPARRLLAAMTGLAVLTGLPAFWTMQGQFRGW
Ga0308309_103170271	3300028906	Soil	GLYIVIGLARRVAALGRRWSAGRPGPRLLAVGTGLAVMATLAVFWTIQGQFRGW
Ga0311340_106862631	3300029943	Palsa	IGVALVALSLAGSLYVVTGLVRRLVTASLRWSAGRPARRFLAAAAGLTVLTALAAFWTVRGQFRGW
Ga0302184_101812061	3300030490	Palsa	HHYAMAAVDAIGILLLALSLAGSLYILTGLARRLTALGLRWSAGRPAQRLLVAVAGLACVTALTTFWTVQGQFRGW
Ga0311372_116459623	3300030520	Palsa	AVVLVILPGAGSLYIAARLARRVAALGRRWSVGRPVRRRLAAAAGLAALTGLAAFWTMQGQFRGW
Ga0311356_107477451	3300030617	Palsa	LAVAGHHYAMAAVDAIGILLLALSLAGSLYILTGLARRLTALGLRWSAGRPAQRLLVAVAGLACVTALTTFWTVQGQFRGW
Ga0302308_104317543	3300031027	Palsa	VAIVGAVAVVLVILPGAGSLYIAARLARRVASLGRRWSVGRPVRRRLAAAAGLAVLTGLAAFWTMQGQFRGW
Ga0302180_101673531	3300031028	Palsa	FGAALIILALAGSAYLLIGLARRLTAVGLRWSTGRPGRRLLTAAVGLAVLTGLAAFWTAAGQFRGW
Ga0302324_1000309701	3300031236	Palsa	GHRYAQAGVDAFGAALIILALAGSAYLLIGLARRLTAVGLRWSTGRPGRRLLTAAVGLAVLTGLAAFWTAAGQFRGW
Ga0318555_101182772	3300031640	Soil	LARRLAAAGLRWSGGHRARRLLVAVAGLACVMALVTFWYGQGQFRGW
Ga0307474_100952871	3300031718	Hardwood Forest Soil	AVDAIDVVLVILPGAGSLYVAVLLARQVTTLARRWSAARPVRRLLAAGTGLAVITALAAFWTLQGQFRGW
Ga0318493_104352852	3300031723	Soil	IVTRLARRLTALGRRWSAGRPARRLLAAGAGLAVIAGLAAFWTLQGQFRGW
Ga0306918_107682362	3300031744	Soil	YIVTGLARRLAAAGLRWSAGHRARRLLVVVTDLAGVTALAAVWYLQGQFRGW
Ga0318492_102451002	3300031748	Soil	IALLALSVAGSLYIVTRLARRLTALGRRWSAGRPARRLLAAGAGLAVIAGLAAFWTLQGQFRGW
Ga0318509_107519611	3300031768	Soil	SLAGSLYVVTGLARRLTAAGRRWSAGRPAPRLLAGAAGLAVLAALAAFWTLQGQFRGW
Ga0318521_101234464	3300031770	Soil	IALVTLSLAGSLYVVTGLARRLIAAGRRWSAGRPAPRLLAGAAGLAVLAALAAFWTLQGQFRGW
Ga0318566_102069471	3300031779	Soil	LARRLATLGLRWSAGGPARRLLVALAGLAGMAAIGSIWTMQGQFLGW
Ga0318547_103601022	3300031781	Soil	ALLALSLAGSLYVVIGLARRLATLGLRWSAGRPGRRLVAALAGLAGMAAIGTVWTMQGQFHGW
Ga0318550_102953441	3300031797	Soil	GLARRLIAAGRRWSAGRPAPRLLAGAAGLAVLAALAAFWTLQGQFRGW
Ga0318523_104327352	3300031798	Soil	AILPIAGSVYVVTGLARQTAAIGLRWSAGRPGRRLLAAAAALACMAVLAAFWITQGQLRG
Ga0318567_105380731	3300031821	Soil	GQADHGYALATVDVLGIVLLGLSLAGSLYIVVGLARRLAAAGLRWSAGHRARRLLVAVAGLACATMLATFWSVQGQFRGW
Ga0306919_105516411	3300031879	Soil	LYVVLGLARRLATLGLRWSAGRPARRLLVALAGLAGMAAIGSIWTMQGQFLGW
Ga0306919_111059942	3300031879	Soil	ALSLAGSLYIVTGLARRLAAAGLRWSAGHRARRLLVVVTDLAGVTALAAVWYLQGQFRGW
Ga0306923_118371042	3300031910	Soil	VLGIVLLGLSLAGSLYIVVGLARRLAAAGLRWSAGHRARRLLVAVAGLACATMLATFWSVQGQFRGW
Ga0310909_103032351	3300031947	Soil	LRDGRGRRGRVALLALSLAGSLYVVIGLARRLATLGLRWSAVGPARRLLVALAGLAGMAAIGSIWTMQGQFLGW
Ga0318563_102645291	3300032009	Soil	VLLALSLAGSLYIVIGLARRLAAAGLRWSGGHRARRLLVAVAGLACVMALVTFWYGQGQFRGW
Ga0318533_113643912	3300032059	Soil	HGYALATVDVLGIVLLGLSLAGSLYIVVGLARRLAAAGLRWSAGHRARRLLVAVAGLACATMLATFWSVQGQFRGW
Ga0318504_104215801	3300032063	Soil	YIVVGLARRLAAAGLRWSAGHRARRLLVAVAGLACATMLATFWSVQGQFRGW
Ga0318504_106648791	3300032063	Soil	GSVYVVTGLARQTAAIGLRWSAGRPGRRLLAAAAALACMAVLAAFWITQGQLRGW
Ga0318514_104624981	3300032066	Soil	LYVVIGLARRLATLGLRWSAGRPARRLVVALAGLAGMAAIGSIWTMQGQFLGW
Ga0318514_106845631	3300032066	Soil	YALATVDVLGIVLLGLSLAGSLYIVVGLARRLAAAGLRWSAGHRARRLLVAVAGLACATMLATFWSVQGQFRGW
Ga0318553_101251221	3300032068	Soil	IGLARRLATLGLRWSAGRPARRLVVALAGLAGMAAIGSIWTMQGQFLGW
Ga0318525_107404522	3300032089	Soil	ASTAGSLYLLTGLARRMAVVGLRWSAGRSARRLLVAAASLAVLAGLASFWTLQGQFRGW
Ga0335085_101126604	3300032770	Soil	AAGHDYAMAAVDAVGIGLLALSLAGSLYIVIGLARRLTALGLRWSAGHPARRLLVALAGLAGMAVLAAFWGMQGQFQGW
Ga0335080_101243201	3300032828	Soil	VAVLLARQVTTLARRWSAARPVRRLLAAGTGLAVITALAAFWTLQGQFRGW
Ga0335080_112901261	3300032828	Soil	LPLAGSLYIVTGLARRATFVGLRWSADRPARRVLAAVAGLACCAALGAFWTLQGQFRGW
Ga0335070_105810391	3300032829	Soil	LYLVTGLARRLSVLGRRWSAGRPARRLLAGAAGLAILTALAAFWTLQGQFCGW
Ga0335081_101632031	3300032892	Soil	LLALSLAGSLYIVIGLARRLTALGLRWSAGHPARRLLAALAGLAGMAVLAAFWGAQGQFRGW
Ga0335075_103967001	3300032896	Soil	MSAAVAGQHFAAAAVDLVGIALVMLPGAGSLYVAIRLGRRIVILGRRWSAGRLARRLLASGTGLAVMAGLAAFWTLQGQFRGW
Ga0335075_106813641	3300032896	Soil	TLYIATGLARRAVALGLRWSAGRPARRLMAAAAGLAGVATLASLWTVQGGFQGW
Ga0335073_109163881	3300033134	Soil	VASHRYPDAVVDAIGVALLALSLAGSLYIVLGLARRLTTMGLRWSARRPGRRILVAAGGLGCVTALAVFWNLQGQFHGW
Ga0335077_102679903	3300033158	Soil	GVALLALSLAGSLYIVIGLARRLTAAGLRWSAGDQVRRLLVAAAGLACVTMLVAFWDLQGQFRGW
Ga0335077_110930062	3300033158	Soil	LSLAGSLYIVTGLARRLAAAGLRWSAGRPARRFLAALAGLAGMAALAAFWAMQGQFRGW
Ga0370483_0254272_1_195	3300034124	Untreated Peat Soil	VALVALSLAGSLYVVTGLVRRLVTASLRWSAGRPARRFLAAAAGLTVLTALAAFWTVRGQFRGW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061934

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences