Metagenome Family F061946

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061946
Family Type	Metagenome
Number of Sequences	131
Average Sequence Length	69 residues
Representative Sequence	VTSNTITIRLRRPKAEIEASAKPNVNAWVNKLIEHALGPRPVDWNEHFDRPSSGRKFRCTGKVERRER
Number of Associated Samples	110
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	26.15 %
% of genes near scaffold ends (potentially truncated)	32.82 %
% of genes from short scaffolds (< 2000 bps)	83.21 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (69.466 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (13.741 % of family members)
Environment Ontology (ENVO)	Unclassified (23.664 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (35.115 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.21% β-sheet: 0.00% Coil/Unstructured: 69.79%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF01850	PIN	25.19
PF06013	WXG100	2.29
PF04545	Sigma70_r4	2.29
PF07963	N_methyl	1.53
PF02585	PIG-L	0.76
PF00072	Response_reg	0.76
PF00582	Usp	0.76
PF04993	TfoX_N	0.76
PF01145	Band_7	0.76
PF00581	Rhodanese	0.76
PF12694	cpYpsA	0.76
PF01041	DegT_DnrJ_EryC1	0.76
PF08532	Glyco_hydro_42M	0.76
PF12029	DUF3516	0.76
PF00899	ThiF	0.76
PF16363	GDP_Man_Dehyd	0.76
PF06831	H2TH	0.76
PF00854	PTR2	0.76
PF00848	Ring_hydroxyl_A	0.76
PF01740	STAS	0.76
PF01026	TatD_DNase	0.76
PF01136	Peptidase_U32	0.76
PF01408	GFO_IDH_MocA	0.76
PF10503	Esterase_PHB	0.76
PF07587	PSD1	0.76
PF07676	PD40	0.76
PF11903	ParD_like	0.76
PF01345	DUF11	0.76
PF02082	Rrf2	0.76
PF02574	S-methyl_trans	0.76
PF00932	LTD	0.76
PF10442	FIST_C	0.76
PF01985	CRS1_YhbY	0.76
PF04313	HSDR_N	0.76
PF02866	Ldh_1_C	0.76
PF00817	IMS	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG4842	Secreted virulence factor YukE/EsxA, WXG100 family	Defense mechanisms [V]	2.29
COG4638	Phenylpropionate dioxygenase or related ring-hydroxylating dioxygenase, large terminal subunit	Inorganic ion transport and metabolism [P]	1.53
COG0039	Malate/lactate dehydrogenase	Energy production and conversion [C]	0.76
COG0266	Formamidopyrimidine-DNA glycosylase	Replication, recombination and repair [L]	0.76
COG0389	Nucleotidyltransferase/DNA polymerase DinP involved in DNA repair	Replication, recombination and repair [L]	0.76
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.76
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.76
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.76
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.76
COG0640	DNA-binding transcriptional regulator, ArsR family	Transcription [K]	0.76
COG0646	Methionine synthase I (cobalamin-dependent), methyltransferase domain	Amino acid transport and metabolism [E]	0.76
COG0826	23S rRNA C2501 and tRNA U34 5'-hydroxylation protein RlhA/YrrN/YrrO, U32 peptidase family	Translation, ribosomal structure and biogenesis [J]	0.76
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	0.76
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	0.76
COG1534	RNA-binding protein YhbY	Translation, ribosomal structure and biogenesis [J]	0.76
COG1725	DNA-binding transcriptional regulator YhcF, GntR family	Transcription [K]	0.76
COG1874	Beta-galactosidase GanA	Carbohydrate transport and metabolism [G]	0.76
COG1959	DNA-binding transcriptional regulator, IscR family	Transcription [K]	0.76
COG2040	Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)	Amino acid transport and metabolism [E]	0.76
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.76
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.76
COG2188	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.76
COG2378	Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains	Transcription [K]	0.76
COG2524	Predicted transcriptional regulator, contains C-terminal CBS domains	Transcription [K]	0.76
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.76
COG3070	Transcriptional regulator of competence genes, TfoX/Sxy family	Transcription [K]	0.76
COG3104	Dipeptide/tripeptide permease	Amino acid transport and metabolism [E]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.47 %
Unclassified	root	N/A	30.53 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.47 %
Unclassified	root	N/A	30.53 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.47 %
Unclassified	root	N/A	30.53 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	52.67 %
Unclassified	root	N/A	30.53 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.53 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	51.15 %
Unclassified	root	N/A	30.53 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.53 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.76 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.76 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.53 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	5.34 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	3.82 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.53 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.76 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	0.76 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.76 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.53 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4.58 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	3.82 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples	0.76 %
Verrucomicrobia bacterium ADurb.Bin006	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin006	0.76 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	0.76 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.76 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.76 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.53 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4.58 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	3.05 %
uncultured Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	0.76 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.76 %
Syntrophotaleaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Syntrophotaleaceae	0.76 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.76 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.76 %
Verrucomicrobia bacterium ADurb.Bin006	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin006	0.76 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.53 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4.58 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	3.05 %
Syntrophotalea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Syntrophotaleaceae → Syntrophotalea	0.76 %
unclassified Acidobacterium	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium	0.76 %
Prosthecobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Prosthecobacter	0.76 %
uncultured Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	0.76 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.76 %
Verrucomicrobia bacterium ADurb.Bin006	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin006	0.76 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.53 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4.58 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	3.05 %
Syntrophotalea acetylenivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Syntrophotaleaceae → Syntrophotalea → Syntrophotalea acetylenivorans	0.76 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	0.76 %
Prosthecobacter vanneervenii	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Prosthecobacter → Prosthecobacter vanneervenii	0.76 %
uncultured Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	0.76 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.76 %
Verrucomicrobia bacterium ADurb.Bin006	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin006	0.76 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.53 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4.58 %
Pedosphaera parvula Ellin514	strain	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	0.76 %
Syntrophotalea acetylenivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Syntrophotaleaceae → Syntrophotalea → Syntrophotalea acetylenivorans	0.76 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	0.76 %
Prosthecobacter vanneervenii	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Prosthecobacter → Prosthecobacter vanneervenii	0.76 %
uncultured Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	0.76 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.76 %
Verrucomicrobia bacterium ADurb.Bin006	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin006	0.76 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16764877	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	15384	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101271775	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	552	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101713049	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300001213\|JGIcombinedJ13530_102911239	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	950	Open in IMG/M
3300001213\|JGIcombinedJ13530_106583934	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	913	Open in IMG/M
3300001213\|JGIcombinedJ13530_109370446	Not Available	515	Open in IMG/M
3300001356\|JGI12269J14319_10087065	Not Available	1613	Open in IMG/M
3300004114\|Ga0062593_102724045	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	563	Open in IMG/M
3300005166\|Ga0066674_10352981	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	690	Open in IMG/M
3300005180\|Ga0066685_10260990	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1196	Open in IMG/M
3300005186\|Ga0066676_10172887	Not Available	1373	Open in IMG/M
3300005330\|Ga0070690_101060152	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	641	Open in IMG/M
3300005340\|Ga0070689_100360981	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1221	Open in IMG/M
3300005552\|Ga0066701_10755782	Not Available	581	Open in IMG/M
3300005557\|Ga0066704_10148262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	1572	Open in IMG/M
3300005576\|Ga0066708_10361732	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	932	Open in IMG/M
3300005598\|Ga0066706_10135375	All Organisms → cellular organisms → Bacteria	1836	Open in IMG/M
3300005598\|Ga0066706_10697032	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	807	Open in IMG/M
3300005764\|Ga0066903_107926481	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	545	Open in IMG/M
3300005836\|Ga0074470_10605537	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2022	Open in IMG/M
3300006046\|Ga0066652_100551800	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1079	Open in IMG/M
3300006224\|Ga0079037_101035193	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Syntrophotaleaceae → Syntrophotalea → Syntrophotalea acetylenivorans	813	Open in IMG/M
3300006796\|Ga0066665_10201438	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin006	1545	Open in IMG/M
3300006797\|Ga0066659_10095813	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2006	Open in IMG/M
3300006800\|Ga0066660_10640399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	883	Open in IMG/M
3300007255\|Ga0099791_10387704	Not Available	672	Open in IMG/M
3300009012\|Ga0066710_100065380	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4626	Open in IMG/M
3300009012\|Ga0066710_100091579	All Organisms → cellular organisms → Bacteria	4022	Open in IMG/M
3300009012\|Ga0066710_102697483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	709	Open in IMG/M
3300009038\|Ga0099829_11342350	Not Available	591	Open in IMG/M
3300009091\|Ga0102851_11235859	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	823	Open in IMG/M
3300009091\|Ga0102851_11631350	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	723	Open in IMG/M
3300009093\|Ga0105240_10657664	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1148	Open in IMG/M
3300009094\|Ga0111539_12147823	All Organisms → cellular organisms → Bacteria → PVC group	648	Open in IMG/M
3300009137\|Ga0066709_100108625	All Organisms → cellular organisms → Bacteria	3427	Open in IMG/M
3300009137\|Ga0066709_101548243	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300009137\|Ga0066709_101654155	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300009137\|Ga0066709_102275039	Not Available	744	Open in IMG/M
3300009167\|Ga0113563_11739455	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	740	Open in IMG/M
3300009175\|Ga0073936_10184340	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1506	Open in IMG/M
3300009176\|Ga0105242_12141999	Not Available	604	Open in IMG/M
3300009504\|Ga0114946_10073797	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1926	Open in IMG/M
3300009504\|Ga0114946_10692566	Not Available	511	Open in IMG/M
3300009545\|Ga0105237_11599548	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	658	Open in IMG/M
3300009548\|Ga0116107_1055080	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Prosthecobacter → Prosthecobacter vanneervenii	1332	Open in IMG/M
3300009621\|Ga0116116_1172330	Not Available	562	Open in IMG/M
3300009630\|Ga0116114_1159667	Not Available	573	Open in IMG/M
3300009839\|Ga0116223_10346518	Not Available	880	Open in IMG/M
3300010304\|Ga0134088_10531930	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	581	Open in IMG/M
3300010304\|Ga0134088_10643444	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	529	Open in IMG/M
3300010323\|Ga0134086_10138766	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	881	Open in IMG/M
3300010391\|Ga0136847_11942513	Not Available	579	Open in IMG/M
3300010397\|Ga0134124_10091765	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2628	Open in IMG/M
3300010399\|Ga0134127_12205529	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	630	Open in IMG/M
3300010403\|Ga0134123_11661619	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	688	Open in IMG/M
3300012096\|Ga0137389_10728910	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	852	Open in IMG/M
3300012201\|Ga0137365_10445886	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	953	Open in IMG/M
3300012201\|Ga0137365_10541189	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	855	Open in IMG/M
3300012204\|Ga0137374_10835057	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	681	Open in IMG/M
3300012207\|Ga0137381_11018396	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	714	Open in IMG/M
3300012210\|Ga0137378_10800504	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	855	Open in IMG/M
3300012212\|Ga0150985_112017429	Not Available	700	Open in IMG/M
3300012350\|Ga0137372_10813716	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	669	Open in IMG/M
3300012353\|Ga0137367_11109827	Not Available	534	Open in IMG/M
3300012356\|Ga0137371_10076146	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2601	Open in IMG/M
3300012469\|Ga0150984_116401394	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	755	Open in IMG/M
3300012469\|Ga0150984_121739147	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	717	Open in IMG/M
3300012532\|Ga0137373_11250561	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	521	Open in IMG/M
3300012582\|Ga0137358_10428837	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	893	Open in IMG/M
3300012917\|Ga0137395_10563600	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	822	Open in IMG/M
3300012918\|Ga0137396_10842836	Not Available	673	Open in IMG/M
3300012922\|Ga0137394_10951046	Not Available	715	Open in IMG/M
3300012923\|Ga0137359_10895652	Not Available	765	Open in IMG/M
3300012925\|Ga0137419_11817666	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300014162\|Ga0181538_10555368	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	601	Open in IMG/M
3300014498\|Ga0182019_10259190	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1146	Open in IMG/M
3300014502\|Ga0182021_11538602	Not Available	801	Open in IMG/M
3300014502\|Ga0182021_11901895	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	716	Open in IMG/M
3300014839\|Ga0182027_10380501	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1574	Open in IMG/M
3300014839\|Ga0182027_10930148	Not Available	897	Open in IMG/M
3300016404\|Ga0182037_12142723	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	503	Open in IMG/M
3300017659\|Ga0134083_10298237	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	683	Open in IMG/M
3300017935\|Ga0187848_10341629	Not Available	621	Open in IMG/M
3300017961\|Ga0187778_10991775	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300018004\|Ga0187865_1012887	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4388	Open in IMG/M
3300018018\|Ga0187886_1057492	Not Available	1764	Open in IMG/M
3300018020\|Ga0187861_10218112	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	845	Open in IMG/M
3300018021\|Ga0187882_1236359	Not Available	710	Open in IMG/M
3300018024\|Ga0187881_10043274	Not Available	2235	Open in IMG/M
3300018024\|Ga0187881_10055082	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1916	Open in IMG/M
3300018040\|Ga0187862_10634773	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	629	Open in IMG/M
3300019487\|Ga0187893_10089441	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2782	Open in IMG/M
3300020000\|Ga0193692_1017120	All Organisms → cellular organisms → Bacteria	1743	Open in IMG/M
3300021072\|Ga0194057_10221468	Not Available	662	Open in IMG/M
3300021168\|Ga0210406_10700708	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	780	Open in IMG/M
3300021602\|Ga0194060_10039538	All Organisms → cellular organisms → Bacteria	2814	Open in IMG/M
3300022555\|Ga0212088_10024566	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	7760	Open in IMG/M
3300024331\|Ga0247668_1005234	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	2781	Open in IMG/M
3300025444\|Ga0208189_1082486	Not Available	574	Open in IMG/M
3300026324\|Ga0209470_1148317	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300027815\|Ga0209726_10152583	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1286	Open in IMG/M
3300027854\|Ga0209517_10043341	Not Available	3513	Open in IMG/M
3300027905\|Ga0209415_10273894	Not Available	1488	Open in IMG/M
3300028798\|Ga0302222_10180318	Not Available	829	Open in IMG/M
3300029442\|Ga0239579_1038760	Not Available	750	Open in IMG/M
3300029943\|Ga0311340_10692805	Not Available	875	Open in IMG/M
3300030520\|Ga0311372_12680280	Not Available	553	Open in IMG/M
3300031231\|Ga0170824_121092274	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	595	Open in IMG/M
3300031234\|Ga0302325_10075807	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	6466	Open in IMG/M
3300031999\|Ga0315274_10019264	All Organisms → cellular organisms → Bacteria	9584	Open in IMG/M
3300032069\|Ga0315282_10076573	All Organisms → cellular organisms → Bacteria	3222	Open in IMG/M
3300032143\|Ga0315292_11305506	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	594	Open in IMG/M
3300032156\|Ga0315295_11281645	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	715	Open in IMG/M
3300032156\|Ga0315295_11437824	Not Available	667	Open in IMG/M
3300032164\|Ga0315283_11516305	Not Available	686	Open in IMG/M
3300032173\|Ga0315268_10001569	All Organisms → cellular organisms → Bacteria	26302	Open in IMG/M
3300032342\|Ga0315286_10427862	Not Available	1388	Open in IMG/M
3300032397\|Ga0315287_11395766	Not Available	797	Open in IMG/M
3300032397\|Ga0315287_12325520	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	581	Open in IMG/M
3300032401\|Ga0315275_11039036	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	899	Open in IMG/M
3300032516\|Ga0315273_13183014	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	508	Open in IMG/M
3300032770\|Ga0335085_11702942	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	649	Open in IMG/M
3300032954\|Ga0335083_10479206	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1046	Open in IMG/M
3300033405\|Ga0326727_10001188	All Organisms → cellular organisms → Bacteria	99115	Open in IMG/M
3300033405\|Ga0326727_10023378	All Organisms → cellular organisms → Bacteria	11798	Open in IMG/M
3300033416\|Ga0316622_100384006	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1573	Open in IMG/M
3300033416\|Ga0316622_102628912	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	579	Open in IMG/M
3300033480\|Ga0316620_11972610	Not Available	580	Open in IMG/M
3300033482\|Ga0316627_101807160	Not Available	629	Open in IMG/M
3300033521\|Ga0316616_102728278	Not Available	665	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.66%
Host-Associated	Host-Associated	5.34%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.60%
Aquatic	Environmental → Aquatic	32.06%
Plants	Host-Associated → Plants	5.34%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.25%
Freshwater	Environmental → Aquatic → Freshwater	29.01%
Peat	Environmental → Terrestrial → Peat	4.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.58%
Marine	Environmental → Aquatic → Marine	2.29%
Sediment	Environmental → Aquatic → Sediment	0.76%
Cave	Environmental → Terrestrial → Cave	0.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.27%
Lake	Environmental → Aquatic → Freshwater → Lake	13.74%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.98%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.58%
Loam	Environmental → Terrestrial → Soil → Loam	3.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.05%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.29%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.53%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.53%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	17.56%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	9.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.87%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	6.11%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.11%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.58%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	3.82%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.05%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	2.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.29%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.53%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.76%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.76%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.21%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	9.16%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	6.11%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.34%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.34%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	3.82%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.05%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	3.05%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.05%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.05%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.05%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	2.29%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.29%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.29%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	1.53%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	1.53%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	1.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.53%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.53%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.53%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.53%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.76%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.76%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.76%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.76%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.76%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.76%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.76%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009175	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009504	Lake sediment microbial communities from Walker lake, Nevada to study Microbial Dark Matter (Phase II) - Walker Lake 11/02/13 Deep Sediment	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009548	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100	Environmental	Open in IMG/M
3300009621	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300020000	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a1	Environmental	Open in IMG/M
3300021072	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L442-15m	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021602	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L222-5m	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025444	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300029442	Freshwater lake microbial communities from Alinen Mustajarvi, Finland - AM13	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032069	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_20	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_02945190	2088090014	Soil	LRRPKAEIEAKAKPNVNAWINKLIEQALGPRETDWNEHFNRVPARKFRYKSDEVRRAER
INPhiseqgaiiFebDRAFT_1012717751	3300000364	Soil	IRLRRPKAEIEAKAKPNVNAWINKLIEQALGPRETDWNEHFNRVPARKFRYKSDEVRRAER*
INPhiseqgaiiFebDRAFT_1017130492	3300000364	Soil	MCYMKSMTSETITIRLRRPKAEIEARARPNVNAWINKLIEQALGPRDVDWNEHFDREPSRKFRYKSDEIRRANR*
JGIcombinedJ13530_1029112392	3300001213	Wetland	VTSNTITIRLRRSKAEIEACAKPNVNAWVNSLIERALGPPKVDWNEHFDRPSSGRKYRLTGKVERHER*
JGIcombinedJ13530_1065839341	3300001213	Wetland	FLAQEGLALPRGLWYTLCVTSNTITVRLRRPKAEIEANARPNVNAWVNQLIEQALGPRKADWREHFDRRSPGRRFRCTGKVERRER*
JGIcombinedJ13530_1093704461	3300001213	Wetland	MNCVTSSTITVRLRRPKAEIEAKAKPNVNAWINKLIEQALGPRTVDWNEHFDGPSLRRQFRCTGKVERQER*
JGI12269J14319_100870652	3300001356	Peatlands Soil	MNLHSWGGLYYKCGVPSNTVTIRLRRPKAEIQANAKPNVNAWVNKLIEQALEPRSVDWNEHFDRPSAGRKFRLTGKVERHER*
Ga0062593_1027240452	3300004114	Soil	VWYSSCVTSNTITIRLRRPKAELEAKAKPNVNAWVNNLIEQALGPRAADWNEHFDRASSGRKFFCTGKTERRER*
Ga0066674_103529812	3300005166	Soil	VTSNTITIRLRRPKAEIEAKAKPNVNAWVNQLIEQALGPRQADWNEHFDRPSAGRTFRCTGKVERRER*
Ga0066685_102609902	3300005180	Soil	VCYKRCVTSNTITVRLRRPKAEIEAAAKPNVNAWVNKLIEQALGPRPVDWNEHFNRKSKQRRFRYRASELRRGER*
Ga0066676_101728872	3300005186	Soil	VTSNTITVRLRRPKAEIEAAAKPNVNAWVNKLIEQALGPRPVDWNEHFDRKSKQRRFRYRASQMRRGER*
Ga0070690_1010601521	3300005330	Switchgrass Rhizosphere	RCVTSNTITVRLRRPKAEIEAAAKPNVNAWVNKLIEQALGPRPLDWNEHFDRKSKQRRFRYRASQMRRGER*
Ga0070689_1003609811	3300005340	Switchgrass Rhizosphere	VTSNTITVRLRRPKAEIEAAAKPNVNAWVNKLIEQALGPRPLDWNEHFDRKSKQRRFRYRASQMRRGER*
Ga0070685_115781682	3300005466	Switchgrass Rhizosphere	KPNVNAWVNKLIEQALGPRPLDWNEHFDRKSKQRRFRYRASQMRRGER*
Ga0066701_107557822	3300005552	Soil	VTSNTITVRLRRPKAEIQDKARPNVNAWVNKLIEHALGPRKVDWNEHFDRPPSERKFRLTGKVERRER*
Ga0066704_101482621	3300005557	Soil	VCYKRCVTSNTITVRLRRPKAEIEAAAKPNVNAWVNKLIEQALGPRPVDWNEHFDRKSKQRRFRYRASQMRRGER*
Ga0066708_103617321	3300005576	Soil	MTSNMITIRLRRPKAEVVARAKPNVNAWINKLIEQALGPREVDWNEHFDRPSSGRKFRYS
Ga0066706_101353752	3300005598	Soil	MGRETFCASRESVLQRCVTSNTITVRLRRPKAEIEAAAKPNVNAWVNKLIEQALGPRPVDWNEHFDRKSKQRRFRYRASQMRRGER*
Ga0066706_106970323	3300005598	Soil	VTSNTITIRLRRPKAEVEAYAKPNVNAWVNKLIEHALGPRKVDWNEHFDQPSSGRKFRCTGKVERRER*
Ga0066903_1079264811	3300005764	Tropical Forest Soil	TSNTITIRLRRPKAEVEAVARPNVNAWVNQLIEQALGPRKADWHEHFDRRSSGRRFRCTGKVERRER*
Ga0074470_106055373	3300005836	Sediment (Intertidal)	VTLNTITIRLRRPKAEIEANAKPNVNAWVNHLIEQALGPRRADWHEHFDRPSSGRRFRCTGKVERRER*
Ga0066652_1005518002	3300006046	Soil	VTSNTITIRLRRPKAEIEAAAKPNINAWVNKLIERALGPRPVDWGEHFDRKSRQRRFRYRASEMRRGER*
Ga0079037_1010351932	3300006224	Freshwater Wetlands	VTANTITIRLRRPKTEIEAVAKPNVNAWVNKLIEQALGPQRVDWNQHFDRKSKQRRFRYC
Ga0066665_102014383	3300006796	Soil	CVTSNTITIRLRRPKAEIEAKAKPNVNAWVNQLIEQALGPRQADWNEHFDRPSAGRTFRCTGKVERRER*
Ga0066659_100958131	3300006797	Soil	PGKVCYKRCVTSNTITVRLRRPKAEIEAAAKPNVNAWVNKLIEQALGPRPVDWNEHFDRKSKQRRFRYRASQMRRGER*
Ga0066660_106403992	3300006800	Soil	VKSNTITIRLRRPKAEIEANAKPNVNAWVNKLIERALGPREVDWNEHFDRRSSGRKFHLSGKVERRES*
Ga0099791_103877041	3300007255	Vadose Zone Soil	MTSNTITIRLRRPKAEIEAKARPNVNAWINKLIEQALGPRSADWNEHFDRAPRRKFRYKSDEVRRAER*
Ga0066710_1000653802	3300009012	Grasslands Soil	MLCCIARIQWYKCCMTSNTVTIRLRRPKAEIEAKAKPNVNAWINKLIEQALGPPTVDWNEHFDRPAPSDRKFRYTSDEIRRRQR
Ga0066710_1000915794	3300009012	Grasslands Soil	VCYKRCVTSNTITVRLRRPKAEIEAAAKPNVNAWVNKLIEQALGPRPVDWNEHFNRKSKQRRFRYRASELRRGER
Ga0066710_1026974832	3300009012	Grasslands Soil	VTSNTITIRLRRPKAEIEAAAKPNVNAWVNKLIEQALGPRTVDWNEHFNRKSRQRRF
Ga0099829_113423502	3300009038	Vadose Zone Soil	MTSERITIRLRRPKAEIEAKAKPNVNAWINKLIEQALGPQSVDWNEHFDRPSSGRKFRYR
Ga0102851_112358592	3300009091	Freshwater Wetlands	VTSNTITVRLRRPKAEIEAAAKPNVNAWVNKLIERALAPPTVDWKEHFERKSQSRRFHYLSDEVRAQQRR*
Ga0102851_116313502	3300009091	Freshwater Wetlands	IRLRRPKAIIEAVAKPNVNAWVNELIERALAPKPVDWKEHFERKSRTRRFRYRSDEVRQQQRQ*
Ga0105240_106576642	3300009093	Corn Rhizosphere	LAIACENFAIAGAVFKWYIDCVTSNTITIRLKRTRAEIQAKAKPNVNAWVNRLIEEALGPRDADWHEHFDRPARKFRYTSDEVRRRNRR*
Ga0111539_121478231	3300009094	Populus Rhizosphere	KAEIEANAKPNVNAWVNKLIEHALGPQRADWNEHFDRLPSGRKFRLSGRVGRRER*
Ga0066709_1001086255	3300009137	Grasslands Soil	VTSNTITIRLRRPKAEIEAAAKPNVNAWVNKLIEQALGPRTVDWNEHFNRKSRQRRFHYRASEMRRSER*
Ga0066709_1015482432	3300009137	Grasslands Soil	LRRPKAEVEAHAKPNVNAWINKLIEHALGPRTVDWKEHFDRLSSARKFRLTGKVERRER*
Ga0066709_1016541552	3300009137	Grasslands Soil	VKSNTITIQLRRPKAEIEANAKPNVNAWVNKLIERALGPREVDWSEHFDRPSSGRKFHLSGKVERRES*
Ga0066709_1022750392	3300009137	Grasslands Soil	MTSNTVTIRLRRPKAEIEAKAKPNVNAWINKLIEQALGPPTVDWNEHFDRPAPSDRKFRYTSDEIRRPNGELR*
Ga0113563_117394552	3300009167	Freshwater Wetlands	VTANTITIRLRRPKTEIEAVAKPNVNAWVNKLIEQALGPQRVDWNQHFDRKSKQRRFRYCSDAVRREER*
Ga0073936_101843403	3300009175	Freshwater Lake Hypolimnion	VTSSPITIRLRRPKGEIEAKAKPNLNAWVNQFIEQAIGPRNTDWNEHFDRPSSGKKFRYRSQVKRAER*
Ga0105242_121419991	3300009176	Miscanthus Rhizosphere	SSSQVTKSLPILDLVWYINSVTSNTITIRLRRPKAEIEANAKPNVNAWVNKLIEHALGPRKADWNEHFDRLPSGRKFRLSGMVERRER*
Ga0114946_100737972	3300009504	Sediment	MTSNTITIRLRRPKAEIEAVAKPNVNAWVNKLIERALAPPAVDWKEHFERKSRTRRFRYRSDEVRAEQRR*
Ga0114946_106925662	3300009504	Sediment	MTSNTITVRLRRPKAEIEAVAKPNVNAWVNKLIERALASRPADWKEHFARKSQRRCFHYRSDEVRQYQRR*
Ga0105237_115995482	3300009545	Corn Rhizosphere	MPRPLAQLAALWYTVSVTSNTITIRLRRPKAEIEAKARPNVNAWVNQLIENALTPRSAGWAEHFDRPSSGRKFRYSKETQRRER*
Ga0116107_10550802	3300009548	Peatland	LRRPKAEIEANANPDANALVNKLIEQALGPRRVDWNEHFDRPSSGRKFRLSGKVERRER*
Ga0116116_11723301	3300009621	Peatland	PCVTSNTITIRLRRPRAEVEAKAKPNLNAWVNQLIEQAIGPRNADWNEHFDRPSSGRKFHYSSQVKRAER*
Ga0116114_11596672	3300009630	Peatland	VTSNTITIRLHRPKAEIQAKARPNVNAWVNHLIEEALCPRDAGWNEHFTRPSSGRKFRSSDKVERRER*
Ga0116223_103465182	3300009839	Peatlands Soil	LRRPKAEIQANAKPNVNAWVNKLIEQALEPRSVDWNEHFDRPSAGRKFRLTGKVERHER*
Ga0134088_105319302	3300010304	Grasslands Soil	MTSNTVTIRLRRPKAEIEAKAKPNVNAWINKLIEQALGPPTVDWNEHFDRPAPSDRKFRYTSDEIRRRQR*
Ga0134088_106434441	3300010304	Grasslands Soil	KAEIEAAAKPNVNAWVNKLIEQALGPRPVDWNEHFDRKSKQRRFRYRASELRRGER*
Ga0134086_101387662	3300010323	Grasslands Soil	PKAEIEAAAKPNVNAWVNKLIEQALGPRPVDWTEHFDRKSRQRRFRYRASEMRRGER*
Ga0136847_119425131	3300010391	Freshwater Sediment	VTSNTITIRLRRPKAEIEAKATPNINAWVNLLIEQALAPRNVDWNEHFDRASSGRKFRCTGKVERRER*
Ga0134124_100917653	3300010397	Terrestrial Soil	VTSNTITIRLRRPKAEVEATAKPNVNAWVNKLIDQALGPRKVDWNDHFDRPSRRTFRLTGKVERRER*
Ga0134127_122055292	3300010399	Terrestrial Soil	VTSNTITVRLRRPKAEIEAAAKPNVNAWVNKLIEQALGPRPADWNEHFDRKSKQRRFRYRASQMRRVER*
Ga0134123_116616191	3300010403	Terrestrial Soil	VTSNTITIRLRRSKAEIEAAARPNVNAWVNKLIEQALGPRPVDWMEHFNRKSRQRRFRYRASEMRRGER*
Ga0137389_107289101	3300012096	Vadose Zone Soil	MTSERITIRLRRPKAEIEAKAKPNVNAWINKLIEQALGPQSVDWNEHFERPSSGRKFRYSAKVDRRER*
Ga0137365_104458861	3300012201	Vadose Zone Soil	VTSNTITIRLRRPKAEIEAAAKPNVNAWVNKLIEQALGPRPVDWNEHFNRKSRQRRFHYRASEMRRSER*
Ga0137365_105411892	3300012201	Vadose Zone Soil	LRRPKAEIEAKAKPNVNAWVNQLIEQALGPRQADWNEHFDRPSAGRTFRCTGKVERRER*
Ga0137374_108350572	3300012204	Vadose Zone Soil	VTSNTITIRLRRPKAEIEAAAKPNVNAWVNKLIEQALGPRPVDWNEHFDRKSRQRRFRYRASEMRQGER*
Ga0137381_110183962	3300012207	Vadose Zone Soil	LRRPKAEVEAYAKPNVNAWVNKLIEHALGPRKVDWNEHFDQPSSGRKFRCTGKVERRER*
Ga0137378_108005042	3300012210	Vadose Zone Soil	VTSNTITIRLRRPKAEIEAKAKPNVNAWVNKLIEQALGPKKADWNEHFDRPARKFRYTSDEIRSQDRR*
Ga0150985_1120174291	3300012212	Avena Fatua Rhizosphere	VTSKTITIRLRRPKAEIEARAKPNVNAWINQLIEKALGPRLADWNEHFNRPSGRKFRFTGKLERRER*
Ga0137372_108137162	3300012350	Vadose Zone Soil	VTSKTITIRLRRPKAEIEAAAKPNVNAWVNKLIEQALGPRPVDWTEHFDRKSRQRRFRYRASEMRRGER*
Ga0137367_111098272	3300012353	Vadose Zone Soil	VTSNTITIRLRRPKAEIEAKAKPNVNAWVNKLIEQALGPKKADWNEHFDRPARRFRYTSDEIRSQDRR*
Ga0137371_100761463	3300012356	Vadose Zone Soil	VTSNTITIRLRRPKAEIEAAAKPNVNAWVNKLIEQALGPRPVDWNEHFDRKSRQRRFRYRASEMRQDER*
Ga0150984_1164013941	3300012469	Avena Fatua Rhizosphere	TVRLRRPKAEIEARAKPNVNAWVNQLIEQALGPRKADWNEHFDRKPARTFRYKSDEVRRADR*
Ga0150984_1217391472	3300012469	Avena Fatua Rhizosphere	ITIRLRRTKAEIEANAKPNVNAWVNKLIEHALGPRKLDWNEHFDRLCSARKFRLSGKVERRER*
Ga0137373_112505612	3300012532	Vadose Zone Soil	AWYKICVTSNTITIRLRRPKAEIEAKAKPNVNAWVNKLIEQALGPKKADWNEHFDRPARKFRYTSDEIRSQDRR*
Ga0137358_104288372	3300012582	Vadose Zone Soil	MTSNTITIRLRRPKQEIEAKARPNVNAWVNKLIEQALGPRTVDWNEHFNRPSPRDRRFRYTSDEIRRLQR*
Ga0137395_105636001	3300012917	Vadose Zone Soil	ESLDHFPVVWYTSSVTSNTITIRLRRPKAELEAKAKPNVNAWVNNLIEQALGPRAADWNEHFDRVSSGRKFFCTGKVERRER*
Ga0137396_108428361	3300012918	Vadose Zone Soil	VRRETITIRLRRPKAEIKTVAKPNVNAWVNRLIEQALARRSADWSEHFARKSKMRRSHFRASETRHASRR*
Ga0137394_109510462	3300012922	Vadose Zone Soil	ETITIRLRRPKAEIKTVAKPNVNAWVNRLIEQALARRSADWSEHFARKSKMRRFHFRASEMRHASRR*
Ga0137359_108956522	3300012923	Vadose Zone Soil	VTSNTITIRLRRPKAEIEAAAKPNINAWVNKLIERALGPRPVDWSEHFDRKSRQRRFRYRASEMRRGER*
Ga0137419_118176661	3300012925	Vadose Zone Soil	VRRETITIRLRRPKAEIKTVAKPNVNAWVNRLIEQALARRSADWSEHFARKSKMRRFHFRASEMRHASRR*
Ga0181538_105553682	3300014162	Bog	EIEAKAKPNINARVNQLIEDALGARGADWVEHFDRPSSGRQFRLTGKVERAER*
Ga0182019_102591902	3300014498	Fen	PRAEIEAKAKPNLNAWVNKLIEQAIGPRDVDWNAHFDRPSSGRKFRYSSQVKRAER*
Ga0182021_115386022	3300014502	Fen	AGHVWYNACVTSNTITIRLRRPRAEVEAKAKPNLNAWVNQLIEQAIGPRSADWNEHFDRPSSGRKFRSSSQVKRAER*
Ga0182021_119018953	3300014502	Fen	VTSNTITIRLRRPKAEIEAKARPNVNAWVNKLIEQALGPRDVDWNEHFDRPSSGRRFRCTGKVERNER*
Ga0182027_103805013	3300014839	Fen	VTSNTITIRLRRPKAEIEASAKPNVNAWVNKLIEHALGPRPVDWNEHFDRPSSGRKFRCTGKVERRER*
Ga0182027_109301483	3300014839	Fen	PCVTSNTITIRLRRPRAEIEAKAKPNLNAWVNKLIEQAIGPRNVDWNEHFDRPSSGRKFRYSSRVKRAER*
Ga0182037_121427232	3300016404	Soil	VTSNTITIRLRRPKAEVEARAKPNVNAWVNQLIERALAPRTTDWNEHFDQPSSGRRFRQSGQVDRQER
Ga0134083_102982371	3300017659	Grasslands Soil	VTSNTITIRLRRPKAEIEAKAKPNVNAWVNQLIEQALGPRQADWNEHFDRPSAGRTFRCTGKVERRER
Ga0187848_103416292	3300017935	Peatland	VTSNTITIRLHRPKAEIQAKARPNVNAWVNHLIEEALCPRDAGWNEHFTRPSSGRKFRSSDKVERRER
Ga0187778_109917751	3300017961	Tropical Peatland	MTSNVITIRLRRPKAEIEAQAKPNVNAWVNALIERALGPRRADWKEHFDRPSTGRTFRLTGKVGRHER
Ga0187865_10128875	3300018004	Peatland	VTSNTVTIRLRRPKAEIEANANPDANALVNKLIEQALGPRRVDWNEHFDRPSSGRKFRLSGKVERRER
Ga0187886_10574922	3300018018	Peatland	VTSNTIAIRLRRPKAEIETNAKPNVNAWVNKLIEHALGPRRVGWNEHFDRLSSGRKFRLTGKVERRER
Ga0187861_102181122	3300018020	Peatland	LPSQILPRPSTYYPLSVTSNTITIRLHRPKAEIQAKARPNVNAWVNHLIEEALCPRDAGWNEHFTRPSSGRKFRSSDKVERRER
Ga0187882_12363592	3300018021	Peatland	RPKAEIEANANPDANALVNKLIEQALGPRRVDWNEHFDRPSSGRKFRLSGKVERRER
Ga0187881_100432742	3300018024	Peatland	VTSNTITIRLRRPRAEVEAKAKPNLNAWVNQLIEQAIGPRNADWNEHFDRPSSGRKFHYSSQVKRAER
Ga0187881_100550825	3300018024	Peatland	LRRPKAEIEANANPDANALVNKLIEQALGPRRVDWNEHFDRPSSGRKFRLSGKVERRER
Ga0187862_106347732	3300018040	Peatland	VRSKTITIRLRRPKAEIEAKAKPNINARVNQLIEDALGARGADWVEHFDRPSSGRQFRLTGKVERAER
Ga0187893_100894411	3300019487	Microbial Mat On Rocks	MAKPNINAWVNKLIEQVIGPRPIDWSDHFDRKSKQRRFRYRASEMRQGER
Ga0193692_10171203	3300020000	Soil	LRRPKAEIEANAKPNVNAWVNRLIEQALGARKADWNEHFDRPPSGRKFRLTGEVERRER
Ga0194057_102214682	3300021072	Anoxic Zone Freshwater	NMGNNTCVTSSPITIRLRRPKGEIEGNAKPNLNAWVNQFIEQAIGPRNTDWNEHFDRPSSGKKFRYRSQVKRAER
Ga0210406_107007082	3300021168	Soil	LRRPKAEIEAKAKPNVNAWINKLIEQALGPREADWNEHFDRAPVRKFRYKSDEVRRAER
Ga0194060_100395383	3300021602	Anoxic Zone Freshwater	MGNNTCVTSSPITIRLRRPKGEIEGNAKPNLNAWVNQFIEQAIGPRNTDWNEHFDRPSSGKKFRYRSQVKRAER
Ga0212088_100245666	3300022555	Freshwater Lake Hypolimnion	MGNNTCVTSSPITIRLRRPKGEIEAKAKPNLNAWVNQFIEQAIGPRNTDWNEHFDRPSSGKKFRYRSQVKRAER
Ga0247668_10052343	3300024331	Soil	VTSNTITIRLRRPKAEIEANAKPNVNAWVNKLIEHALGPRKVDWNEHFNRPSSGRKFRCTGKVERCER
Ga0208189_10824862	3300025444	Peatland	LSVTSNTITIRLHRPKAEIQAKARPNVNAWVNHLIEEALCPRDAGWNEHFTRPSSGRKFRSSDKVERRER
Ga0209470_11483172	3300026324	Soil	VTSNTITVRLRRPKAEIEAAAKPNVNAWVNKLIEQALGPRPVDWNEHFDRKSKQRRFRYRASQMRRGER
Ga0209726_101525831	3300027815	Groundwater	MTSNVITIRLRRPKAQIQAKAKPNIDAWVNGLIEQALGPRNADWNEHFDKPLTGRNYCCTGKVERRER
Ga0209517_100433414	3300027854	Peatlands Soil	MNLHSWGGLYYKCGVPSNTVTIRLRRPKAEIQANAKPNVNAWVNKLIEQALEPRSVDWNEHFDRPSAGRKFRLTGKVERHER
Ga0209415_102738942	3300027905	Peatlands Soil	LRPVRLKRVARKMNLHSWGGLYYKCGVPSNTVTIRLRRPKAEIQANAKPNVNAWVNKLIEQALEPRSVDWNEHFDRPSAGRKFRLTGKVERHER
Ga0302222_101803182	3300028798	Palsa	VTSNTITIRLTRPKTEIEAKAKPNVNAWVNKLIEQALGPRNLDWSEHFARPSSGRKFRYSDKVQRRER
Ga0239579_10387601	3300029442	Freshwater Lake	GEIEAKAKPNLNAWVNQFIEQAIGPRNTDWNEHFDRPSSGKKFRYRSQVKRAER
Ga0311340_106928053	3300029943	Palsa	LQHAKGLATKTILWYLWSVTSNTITIRLTRPKTEIEAKAKPNVNAWVNKLIEQALGPRNLDWSEHFARPSSGRKFRYSDKVQRRER
Ga0311372_126802801	3300030520	Palsa	VTSNTITIRLTRPKTEIEAKAKPNVNAWVNKLIEQALGPRNLDWSEHFARPSSGRKFRY
Ga0170824_1210922741	3300031231	Forest Soil	SNTITIRLRRPKSEIEANAKPNVNAWVNKLIEHALGPRNVDWNEHFDQPSSGRKFRCTGRVERRER
Ga0302325_100758074	3300031234	Palsa	VTSNTITIRLTRPKTEIKAKAKPNVNAWVNKLIEQALGPRNLDWSEHFARPSSGRKFRYSDKVQRRER
Ga0315274_100192646	3300031999	Sediment	VVQACVTETITIRPTRPKAEIEAKAKPNVNAWINRLIEQALGPRQVDWEAHFQRPATGRKFRYTSDEVRRENR
Ga0315282_100765732	3300032069	Sediment	VTPNTITIRLRRPKAEIEANAKPNVNAWVNKLIEHALGPRRVDWNEHLDRPSSGRKFRLTGKVERRER
Ga0315292_113055061	3300032143	Sediment	TPGMKSNVNTVRLRRPKAEIQAKARPNLNAWINQLIEQALGPRSADWNEHFDRPSSGRKFRYSSLAQRAER
Ga0315295_112816451	3300032156	Sediment	ETITIRPTRPKAEIEAKAKPNVNAWINRLIEQALGPREVDWEAHFQRPATGRKFRYTSDEVRRENR
Ga0315295_114378241	3300032156	Sediment	QGNVWYKPCVTSNTITIRLRRPRAEIEAKAKPNLNAWVNQLIEQALGPRSADWNEHFDRPSSGRRFHYSSKVKRAER
Ga0315283_115163052	3300032164	Sediment	KPFACPGEVWYKPCVTSNTITIRLRRPRAEIEAKAKPNLNAWVNKLIEQAIGPRNVDWNEHFDQPSAGRKFRYSSQVNRAER
Ga0315268_1000156912	3300032173	Sediment	VRQACYKNGVTTNTITIRLRRPKPELQAKAKPNINAWVNKLIEQALGPPDPDWNEHFDRPTAGRRFRYTSDECRSIHS
Ga0315286_104278623	3300032342	Sediment	ITIRLRRPRAEIEAKAKPNLNAWVNKLIEQAIGPRNVDWNEHFDQPSAGRKFRYSSQVNRAER
Ga0315287_113957661	3300032397	Sediment	MTSNLVTIRLRQPKAELEARAKPNLSTGINQLIEQALGPRSADWNEHFDRPPSGRKFRYSPQVKRAER
Ga0315287_123255201	3300032397	Sediment	RLRRPRAEIEAKAKPNLNAWVNQLIEEALGPRSADWNEHFDRPSSGRKFRYSSLAQRAER
Ga0315275_110390362	3300032401	Sediment	VVWYKNCVTETITIRPTRPKAEIEAKAKPNVNAWINRLIEQALGPREVDWEAHFQRPATGRKFRYTSDEVRRENR
Ga0315273_131830141	3300032516	Sediment	TSNTITIRLRRPKAEIEAKAKPNLNAWVNQLIEQAIGPRSVDWNEHFDRPSSGRKFRSSSLIKRVER
Ga0335085_117029422	3300032770	Soil	MTSNTITVRLKRPKAEIEAAAKPNVNAWVNKLIEQALGPREVDWAAHFNRKSKQRRFHYRASEMRKSER
Ga0335083_104792062	3300032954	Soil	MTSNTITIRLRRPKSEITAKAQPNVNAWINNLIEQALGPQKVDWNAHFDRPSSGRKFRYSDKVQRRER
Ga0326727_1000118830	3300033405	Peat Soil	VTSNTITIRLRRPRAEVEAKAKPNLNAWVNQLIEQAIGPRNADWNEHFDRPSSGRKFRYSSQVKRAER
Ga0326727_100233783	3300033405	Peat Soil	VISNTITIRLRRLKSEIQAKARPNVNAWFNHLIEQALCPRHTDWHEHFTRPSSGRKFRCSDKVERRER
Ga0316622_1003840063	3300033416	Soil	VTANTITIRLRRPKTEIEAVAKPNVNAWVNKLIEQALGPQRVDWNQHFDRKSKQRRFRYCSDAVRREER
Ga0316622_1026289121	3300033416	Soil	RRSGAWYRVCVTSNTITIRLRRPKAIIEAAAKPNVNAWVNELIERALAPKPVDWKEHFERKSRTRRFRYRSDEVRQQQRQ
Ga0316620_119726102	3300033480	Soil	IRLRRPKAEIEAAAKPNINAWVNKLIEHALGPRQVDWNEHFDRSSSGRKFRLTGRVERRE
Ga0316627_1018071601	3300033482	Soil	VRPHAACYTACVTSNTITVRLRRTKAEIEAAAKPNVNAWVNKLIERALAPPTVDWKEHFERKSQSRRFRYRSDEIRAQQQR
Ga0316616_1027282783	3300033521	Soil	RRPKAEIEAAARPNVNAWVNKLIERALAPPTVDWKEHFERKSQVRRFRYRSNEVRARQRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F061946

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences