Metagenome / Metatranscriptome Family F061995

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F061995
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	63 residues
Representative Sequence	MYSTINHQIARDRIADLHRKAQHGALARTARQGRRPHERPSGRHVLRLPVIAVRRALTA
Number of Associated Samples	88
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	74.81 %
% of genes near scaffold ends (potentially truncated)	37.40 %
% of genes from short scaffolds (< 2000 bps)	84.73 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (53.435 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.191 % of family members)
Environment Ontology (ENVO)	Unclassified (41.985 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (69.466 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.72% β-sheet: 0.00% Coil/Unstructured: 48.28%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF00027	cNMP_binding	7.63
PF01494	FAD_binding_3	5.34
PF05239	PRC	4.58
PF13450	NAD_binding_8	3.05
PF00211	Guanylate_cyc	2.29
PF13535	ATP-grasp_4	2.29
PF00496	SBP_bac_5	1.53
PF07859	Abhydrolase_3	1.53
PF13545	HTH_Crp_2	1.53
PF04909	Amidohydro_2	1.53
PF00857	Isochorismatase	1.53
PF12894	ANAPC4_WD40	1.53
PF03807	F420_oxidored	1.53
PF00106	adh_short	0.76
PF00196	GerE	0.76
PF02567	PhzC-PhzF	0.76
PF02909	TetR_C_1	0.76
PF00708	Acylphosphatase	0.76
PF00583	Acetyltransf_1	0.76
PF08281	Sigma70_r4_2	0.76
PF04191	PEMT	0.76
PF03992	ABM	0.76
PF02730	AFOR_N	0.76
PF01833	TIG	0.76
PF12773	DZR	0.76
PF01526	DDE_Tnp_Tn3	0.76
PF03663	Glyco_hydro_76	0.76
PF07730	HisKA_3	0.76
PF07690	MFS_1	0.76
PF03358	FMN_red	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	10.69
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	5.34
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	5.34
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	5.34
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	2.29
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	1.53
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	1.53
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.53
COG0384	Predicted epimerase YddE/YHI9, PhzF superfamily	General function prediction only [R]	0.76
COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	Transcription [K]	0.76
COG2414	Aldehyde:ferredoxin oxidoreductase	Energy production and conversion [C]	0.76
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.76
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.76
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.76
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.76
COG4644	Transposase and inactivated derivatives, TnpA family	Mobilome: prophages, transposons [X]	0.76
COG4833	Predicted alpha-1,6-mannanase, GH76 family	Carbohydrate transport and metabolism [G]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.44 %
All Organisms	root	All Organisms	46.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.44 %
cellular organisms	root	All Organisms → cellular organisms	46.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.44 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.44 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	38.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.44 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	35.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.44 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	24.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.44 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	4.58 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.05 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.05 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	2.29 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.44 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	4.58 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.05 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.05 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	2.29 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.44 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	4.58 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.05 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.05 %
Streptacidiphilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	0.76 %
Phytohabitans	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.44 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	4.58 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.05 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.05 %
Phytohabitans suffuscus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans suffuscus	0.76 %
Streptacidiphilus melanogenes	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus melanogenes	0.76 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003505\|JGIcombinedJ51221_10007859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3356	Open in IMG/M
3300004082\|Ga0062384_100062888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1850	Open in IMG/M
3300004091\|Ga0062387_101376114	Not Available	561	Open in IMG/M
3300004152\|Ga0062386_100300226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1280	Open in IMG/M
3300005332\|Ga0066388_100593395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1731	Open in IMG/M
3300005332\|Ga0066388_100680661	All Organisms → cellular organisms → Bacteria	1639	Open in IMG/M
3300005332\|Ga0066388_101946025	Not Available	1051	Open in IMG/M
3300005332\|Ga0066388_103261279	Not Available	829	Open in IMG/M
3300005467\|Ga0070706_101422019	Not Available	635	Open in IMG/M
3300005537\|Ga0070730_10548369	Not Available	740	Open in IMG/M
3300005602\|Ga0070762_10007970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5227	Open in IMG/M
3300005602\|Ga0070762_10687271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	686	Open in IMG/M
3300005610\|Ga0070763_10159374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1184	Open in IMG/M
3300005764\|Ga0066903_100028353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6246	Open in IMG/M
3300005764\|Ga0066903_100759968	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1724	Open in IMG/M
3300005764\|Ga0066903_101688560	Not Available	1205	Open in IMG/M
3300005764\|Ga0066903_104088629	Not Available	781	Open in IMG/M
3300005764\|Ga0066903_104512098	Not Available	743	Open in IMG/M
3300005764\|Ga0066903_105141958	Not Available	693	Open in IMG/M
3300005764\|Ga0066903_105881086	Not Available	644	Open in IMG/M
3300005921\|Ga0070766_10097686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1734	Open in IMG/M
3300005921\|Ga0070766_10129989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1522	Open in IMG/M
3300006059\|Ga0075017_100355033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1092	Open in IMG/M
3300006176\|Ga0070765_101509216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	632	Open in IMG/M
3300006176\|Ga0070765_102080388	Not Available	530	Open in IMG/M
3300009520\|Ga0116214_1297120	Not Available	619	Open in IMG/M
3300009522\|Ga0116218_1203490	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300009525\|Ga0116220_10194384	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300009698\|Ga0116216_10929497	Not Available	520	Open in IMG/M
3300009792\|Ga0126374_10495720	Not Available	879	Open in IMG/M
3300009792\|Ga0126374_11314315	Not Available	585	Open in IMG/M
3300009792\|Ga0126374_11890500	Not Available	502	Open in IMG/M
3300010043\|Ga0126380_10656288	Not Available	836	Open in IMG/M
3300010043\|Ga0126380_11027039	Not Available	696	Open in IMG/M
3300010048\|Ga0126373_10268699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1687	Open in IMG/M
3300010048\|Ga0126373_10414151	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1375	Open in IMG/M
3300010048\|Ga0126373_13175871	Not Available	512	Open in IMG/M
3300010359\|Ga0126376_11117224	Not Available	797	Open in IMG/M
3300010360\|Ga0126372_12249628	Not Available	595	Open in IMG/M
3300010360\|Ga0126372_12501692	Not Available	567	Open in IMG/M
3300010361\|Ga0126378_10634293	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1182	Open in IMG/M
3300010361\|Ga0126378_11039410	Not Available	922	Open in IMG/M
3300010361\|Ga0126378_12519477	Not Available	587	Open in IMG/M
3300010361\|Ga0126378_13070152	Not Available	532	Open in IMG/M
3300010362\|Ga0126377_11394154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	774	Open in IMG/M
3300010366\|Ga0126379_10764696	Not Available	1063	Open in IMG/M
3300010366\|Ga0126379_11708126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	734	Open in IMG/M
3300010376\|Ga0126381_100241648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2440	Open in IMG/M
3300010398\|Ga0126383_12989690	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300010398\|Ga0126383_13096787	Not Available	543	Open in IMG/M
3300016294\|Ga0182041_11985665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	541	Open in IMG/M
3300016319\|Ga0182033_10404672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1154	Open in IMG/M
3300016319\|Ga0182033_11510126	Not Available	606	Open in IMG/M
3300016357\|Ga0182032_11463660	Not Available	592	Open in IMG/M
3300017821\|Ga0187812_1063404	Not Available	1233	Open in IMG/M
3300017821\|Ga0187812_1175150	Not Available	688	Open in IMG/M
3300017924\|Ga0187820_1001661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5056	Open in IMG/M
3300017926\|Ga0187807_1003153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5095	Open in IMG/M
3300017926\|Ga0187807_1087302	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300017928\|Ga0187806_1021924	Not Available	1855	Open in IMG/M
3300017942\|Ga0187808_10037970	Not Available	2009	Open in IMG/M
3300017955\|Ga0187817_10063896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2282	Open in IMG/M
3300017961\|Ga0187778_10072545	All Organisms → cellular organisms → Bacteria	2114	Open in IMG/M
3300017970\|Ga0187783_10260055	All Organisms → cellular organisms → Bacteria	1268	Open in IMG/M
3300017972\|Ga0187781_10590380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans suffuscus	800	Open in IMG/M
3300017972\|Ga0187781_10757861	Not Available	704	Open in IMG/M
3300017973\|Ga0187780_11040266	Not Available	597	Open in IMG/M
3300017973\|Ga0187780_11293779	Not Available	536	Open in IMG/M
3300017975\|Ga0187782_10443794	Not Available	989	Open in IMG/M
3300017975\|Ga0187782_10978501	Not Available	658	Open in IMG/M
3300018001\|Ga0187815_10131804	Not Available	1056	Open in IMG/M
3300018007\|Ga0187805_10197021	Not Available	920	Open in IMG/M
3300018058\|Ga0187766_10544297	Not Available	786	Open in IMG/M
3300018062\|Ga0187784_11215380	Not Available	598	Open in IMG/M
3300020579\|Ga0210407_11425389	Not Available	513	Open in IMG/M
3300020581\|Ga0210399_10039002	Not Available	3804	Open in IMG/M
3300021088\|Ga0210404_10139973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1260	Open in IMG/M
3300021171\|Ga0210405_10655078	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300021171\|Ga0210405_10726609	Not Available	765	Open in IMG/M
3300021405\|Ga0210387_10272179	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1485	Open in IMG/M
3300021474\|Ga0210390_10113736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2264	Open in IMG/M
3300021559\|Ga0210409_10149675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2138	Open in IMG/M
3300021560\|Ga0126371_10013684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7372	Open in IMG/M
3300021560\|Ga0126371_10057668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3734	Open in IMG/M
3300021560\|Ga0126371_10218480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2009	Open in IMG/M
3300021560\|Ga0126371_11042166	Not Available	959	Open in IMG/M
3300021560\|Ga0126371_11361563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	842	Open in IMG/M
3300021560\|Ga0126371_12137981	Not Available	675	Open in IMG/M
3300021560\|Ga0126371_12709220	Not Available	601	Open in IMG/M
3300022709\|Ga0222756_1072193	Not Available	552	Open in IMG/M
3300025910\|Ga0207684_11294737	Not Available	600	Open in IMG/M
3300027829\|Ga0209773_10159955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	939	Open in IMG/M
3300027855\|Ga0209693_10047375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2112	Open in IMG/M
3300027855\|Ga0209693_10552740	Not Available	547	Open in IMG/M
3300027874\|Ga0209465_10381852	Not Available	705	Open in IMG/M
3300027889\|Ga0209380_10011240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5185	Open in IMG/M
3300027889\|Ga0209380_10017503	All Organisms → cellular organisms → Bacteria	4068	Open in IMG/M
3300031234\|Ga0302325_10223278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus melanogenes	3194	Open in IMG/M
3300031543\|Ga0318516_10375693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	820	Open in IMG/M
3300031544\|Ga0318534_10181220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1217	Open in IMG/M
3300031544\|Ga0318534_10254351	Not Available	1013	Open in IMG/M
3300031546\|Ga0318538_10441154	Not Available	705	Open in IMG/M
3300031640\|Ga0318555_10192297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1099	Open in IMG/M
3300031668\|Ga0318542_10099945	Not Available	1399	Open in IMG/M
3300031668\|Ga0318542_10344257	Not Available	766	Open in IMG/M
3300031680\|Ga0318574_10896403	Not Available	519	Open in IMG/M
3300031682\|Ga0318560_10130614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1320	Open in IMG/M
3300031708\|Ga0310686_110803277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2302	Open in IMG/M
3300031708\|Ga0310686_117506136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1893	Open in IMG/M
3300031747\|Ga0318502_10496923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	731	Open in IMG/M
3300031764\|Ga0318535_10408052	Not Available	606	Open in IMG/M
3300031768\|Ga0318509_10830380	Not Available	511	Open in IMG/M
3300031781\|Ga0318547_10145567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1390	Open in IMG/M
3300031798\|Ga0318523_10392405	Not Available	690	Open in IMG/M
3300031910\|Ga0306923_11637981	Not Available	667	Open in IMG/M
3300031912\|Ga0306921_12182214	Not Available	584	Open in IMG/M
3300031912\|Ga0306921_12766707	Not Available	503	Open in IMG/M
3300031941\|Ga0310912_10996605	Not Available	643	Open in IMG/M
3300031947\|Ga0310909_10328741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1283	Open in IMG/M
3300031954\|Ga0306926_11924680	Not Available	667	Open in IMG/M
3300032052\|Ga0318506_10087362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1317	Open in IMG/M
3300032052\|Ga0318506_10385872	Not Available	621	Open in IMG/M
3300032060\|Ga0318505_10297343	Not Available	762	Open in IMG/M
3300032063\|Ga0318504_10389654	Not Available	664	Open in IMG/M
3300032064\|Ga0318510_10366478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	609	Open in IMG/M
3300032066\|Ga0318514_10055401	All Organisms → cellular organisms → Bacteria	1928	Open in IMG/M
3300032089\|Ga0318525_10487777	Not Available	631	Open in IMG/M
3300032160\|Ga0311301_11133778	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300032896\|Ga0335075_10821868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	866	Open in IMG/M
3300033134\|Ga0335073_11194472	Not Available	764	Open in IMG/M
3300033290\|Ga0318519_10422410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	796	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.55%
Aquatic	Environmental → Aquatic	11.45%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.79%
Freshwater	Environmental → Aquatic → Freshwater	10.69%
Sediment	Environmental → Aquatic → Sediment	0.76%
Peat	Environmental → Terrestrial → Peat	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.78%
Loam	Environmental → Terrestrial → Soil → Loam	19.85%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.16%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.30%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	18.32%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.16%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	7.63%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.05%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.53%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.19%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	21.37%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.16%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	8.40%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	7.63%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	7.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.11%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.82%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.53%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.53%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.76%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.76%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.76%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022709	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ51221_100078593	3300003505	Forest Soil	MYPTINHQIMKARVADLHRQAQQDALACAARQGRRPPKRQSRRGVLRLPVITARRVLTAWAAHA*
Ga0062384_1000628882	3300004082	Bog Forest Soil	MYSTINYQIMQARVADLHRQAQRDALARAARQGRRPPKHQSERGVLRLPVITARRALTAWAAHS*
Ga0062387_1013761141	3300004091	Bog Forest Soil	MYSTINYQIMQARVADLHRQAQQDALARAARQGRRPPKHQSERGVLRLPVITARR
Ga0062386_1003002262	3300004152	Bog Forest Soil	MYSTFNHQIAQDRIADMHRQAQRDALAREARQGSQPHKRPSAWHVLRLPIIAFRRVLTA*
Ga0066388_1005933951	3300005332	Tropical Forest Soil	MCSTINHQEMYPTINHQIARDRIADLHRQAQHDALARAARQGRPHKRPSGRHVLRLPIIAARRALTA*
Ga0066388_1006806612	3300005332	Tropical Forest Soil	MYCTINHQEMYSTINHQIARDRIPDLHRQAQQDALARAVRQGRRPHERPSGRHVLRLPIIAVRRALTA*
Ga0066388_1019460251	3300005332	Tropical Forest Soil	MYSTFNHEEYSTINRQIARDRIADLHRRAQHDALARAASEGRRPHQRPAGRHVLRLPIIAVRHARTA*
Ga0066388_1032612791	3300005332	Tropical Forest Soil	MYSTINHQIMQTRLADLHRQARQDALARAARQGRRPHQHPSGRRVLRLPIIAA
Ga0070706_1014220192	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MYSTVNYQIAQDRIADLHRQAQHDALARAARQGRRPRKHRSGHRVPRFPVIAARRVLIALGAHT*
Ga0070730_105483692	3300005537	Surface Soil	MYSTVNYQIAQDRIPDLHRQAQHDALARAARQGRRPHKHRSGHRVPRFPVIAARRVLIALGAHA*
Ga0070762_100079703	3300005602	Soil	MYSTINHQIMQARVADLHRQAQQDALARAARQGRRPPKHQSGRRVLRLPVITARRVLTAWAAHA*
Ga0070762_106872712	3300005602	Soil	MYYTINHQIMQARVADLHRQAQQDTLARAARQGRRPPKRQSGRRVLRLPVI
Ga0070763_101593742	3300005610	Soil	MYYTINHQIMQARVADLHRQAQQDTLARAARQGRRPPKRQSGRRVLRLPVITARRVLTAWAAHA*
Ga0066903_1000283537	3300005764	Tropical Forest Soil	MYSTINHQIMQTRLADLHRQARQDALARAARQGRRPHQHPSGRRVLRLPIIAARRLLTA*
Ga0066903_1007599682	3300005764	Tropical Forest Soil	MYSTINHQIAQARIADLHRQAQQDALVRAARSGRRPHKHPSRRHVLRLPIITTRRSITA*
Ga0066903_1016885603	3300005764	Tropical Forest Soil	MYSTINHQIAQARIADLHRQAQQAALARTARRGRRPHKHVPGRHVLRLPIITRRRAITA*
Ga0066903_1040886291	3300005764	Tropical Forest Soil	MYSTFNRQEMYSIINRQIARDRIADLHRQGQHDALARAARQGRRPHKHPSGHVLRLPIIAVRRALTA*
Ga0066903_1045120982	3300005764	Tropical Forest Soil	MYRTINHQIARDRIADLHRRAQHDALARAAQGRPHKRPSARHVLRLPIIAGRRALTA*
Ga0066903_1051419582	3300005764	Tropical Forest Soil	MYCTINHQEMYSTINHQIARDRVADLHRQAQRDALARTARQGRRSHERPSGRRVLRLPIFAVRRALTA*
Ga0066903_1058810861	3300005764	Tropical Forest Soil	MRSTISHQEMYSTINRQIARDRIAGLHRQGQHDALARAARQGRRPHRRPSGRHVLRLPVIAARRALTA*
Ga0070766_100976861	3300005921	Soil	MYYTINHQIMQARVADLHRQAQQDTLARAARQGRRPPKRQSGRRVFRLPVITARRVLTAWAAHA*
Ga0070766_101299891	3300005921	Soil	RRGEAGGRRSTYSPEAVMYSTINHQIMQARVADLHRQAQQDALARAARQGRRPPKHQSGRRVLRLPVITARRVLTAWAAHA*
Ga0075017_1003550331	3300006059	Watersheds	MYSTFNHQIAQDRIADMHRQAQQDALARQARQARQDRQPHKRPSAWHVLRLPVIVARRVLTA*
Ga0070765_1015092163	3300006176	Soil	VYSAINYQIMQARVADLHRQAQQDAMARAVRQGRRPPKRQSGRRVLRLPVITARRVLTAWAAHA*
Ga0070765_1020803881	3300006176	Soil	MYYTINHQIMQARVADLHRQAQQDTLARAARQGRRPPKRQPGPRVLRLPVITARRVLTAWAAHA*
Ga0116214_12971202	3300009520	Peatlands Soil	MYSTFNHQIAQDRIADMHRQAQQDALARQARQDRQDRRPHKRPSAWHVLRLPVIVARRVLTA*
Ga0116218_12034902	3300009522	Peatlands Soil	MYSTFNHQIAQDRIADMHRQAQQDALAREARQDRRPHKRPSAWHVLRLPVIVARRVLTA*
Ga0116220_101943842	3300009525	Peatlands Soil	STFNHQIAQDRIADMHSQAQQDALARQARQDRQDRRPHKRPSAWHVLRLPVIVARRVLTA
Ga0116216_109294971	3300009698	Peatlands Soil	SSRVLGEAEMYSTFNHQIAQDRIADMHRQAQQDALARQARQDRQDRRPHKRPSAWHVLRLPVIVARRVLTA*
Ga0126374_104957202	3300009792	Tropical Forest Soil	MYCTTNHQEMYSTIHRQIARDRIADLHRQAQRDALARAAEGRRPHERPSRRHVLWLPIIAVRRALTA*
Ga0126374_113143151	3300009792	Tropical Forest Soil	MYCTINHQEMYSTINHQIARDRVADLHRQAQRDALARTARQGRRSHERPSGRRVLRLPI
Ga0126374_118905001	3300009792	Tropical Forest Soil	VQPDHREAEMCSTINHQEMYSTINHQIARDRIADLHRQAQHGALARAARQGRPHKRTSGRHVLRLPIIAARRALTA*
Ga0126380_106562882	3300010043	Tropical Forest Soil	MCSTINHQEMYSTINHQIARDRVADLHRQAQHDALARTARQGRRPHKRPSGRRVLRLPIIAARRALTA*
Ga0126380_110270392	3300010043	Tropical Forest Soil	LAAKVQPDHGEAEMYSTFNRQEMYSTINRQIARDRIADLHRQGQHDALARAARQGRRPHKHPSGHVLRLPIIAVRRALTA*
Ga0126373_102686992	3300010048	Tropical Forest Soil	MYRTINHQIARDRTADLHRRAQHDALARAARQGRPHKLLPGRHVLRLPIIAVRRALTA*
Ga0126373_104141512	3300010048	Tropical Forest Soil	MYSTINHQIAQARIADMHRQAHQDALVRAARRGRRPHKRPSGRHVLRLPIITRRRAITA*
Ga0126373_131758711	3300010048	Tropical Forest Soil	VKVEPDHREAEMYPTINHREMYSTIDRQIARDRIADLHRRAQHDALARAAQGRPHKRPSDRHVLRLPIIAGRRALTA*
Ga0126376_111172241	3300010359	Tropical Forest Soil	MYCTINHQEMYSTINHQIARDRIADLHRQAQHDALARAARQGRPHKRPSGRHVLRLPIIAGRRALTA*
Ga0126372_122496281	3300010360	Tropical Forest Soil	EAVMYSTINHQIAQARIADLHRQAQQDALVRAARSGRRPHKHPSRRHVLRLPIITTRRSITA*
Ga0126372_125016921	3300010360	Tropical Forest Soil	EMYSTINHQIARDRIADLHRQAQHDALARAAHQGRRPRKRPSGRRVLRLPIIAGRRALTA
Ga0126378_106342933	3300010361	Tropical Forest Soil	MYSTINHQIAQARIADLHRQAQQDALVRAARRGRRPHKHPSGRHVLRLPIITTRRAIRA*
Ga0126378_110394101	3300010361	Tropical Forest Soil	MYSNFNYQIAQDRIADVHHQAQRDALARAARQPQTRQSGHRAFRLPVIAVRRLLIALGAHT*
Ga0126378_125194771	3300010361	Tropical Forest Soil	MYCTINHREMYSTINHQIARDRIADLHRQAEHDALARAVLQDRRPHERPSGRHVLRLPIIAGRRALTA*
Ga0126378_130701521	3300010361	Tropical Forest Soil	VQRARSWQRKFSRVKGEAEMYCTINHQEMYSTINHQIARDRIPDLHRQAQQDALARAVRQGRRPHERPSGRHVLRLPIIAVRRALTA*
Ga0126377_113941541	3300010362	Tropical Forest Soil	MYCTINHREMYSTISHQIARDRIADLHRQAEHDALARAVLQDRRPHERPSGRHVLRLPIIAVRRALTA*
Ga0126379_107646962	3300010366	Tropical Forest Soil	MCSTINHQEMYSTISHQIGRDRIADMHRRAQHGALARAARQGRRPHKGPSGRHVLRLPIIVVRRALTA*
Ga0126379_117081262	3300010366	Tropical Forest Soil	YSTINHQIARDRIPDLHRQAQQDALARAVRQGRRPHERPSGRHVLRLPIIAVRRALTA*
Ga0126381_1002416482	3300010376	Tropical Forest Soil	MYCTINHQEMYSTINHQIARDRIADLHRQAQHDALARAVRQGRGPHERPSGRHVLRLPIIAVRRALTA*
Ga0126383_129896902	3300010398	Tropical Forest Soil	QPDHGEAEMYSTFNRQEMYSTINRQIARDRIADLHRQGQHDALARAARQGRRPHKHPSGHVLRLPIIAVRRALTA*
Ga0126383_130967872	3300010398	Tropical Forest Soil	MRSTISHQEMYSTINRQIARDRIAGLHRRAQHDALARAARQGRRPHQRPSGRHVLRLPVIAVRRALTA*
Ga0182041_119856651	3300016294	Soil	MYSTFNHQIAQDRIADMHRQAQQDALARHARQGRQPHKRPSGWHVLRLPIFAARR
Ga0182033_104046722	3300016319	Soil	MNSSIHHQIMQTRVADRHRRGQRDALSRAARQGRRPPTRQSGRRVLRLPVITARRVLTAWAA
Ga0182033_115101261	3300016319	Soil	PDHREAKMYRSINHQIATDRTADLHRRAQRDALTRAARQGRPHERPSGRHVLRLPIIVVRRALTA
Ga0182032_114636601	3300016357	Soil	ATDRTADLHRRAQRDALTRAARQGRPHERPSGRHVLRLPIIVVRRALTA
Ga0187812_10634041	3300017821	Freshwater Sediment	MYSTINHQIMQARVADLHRQAQQDALARAARQGRRPPKRQSGRRVLRLPVITARRVLTAWAADT
Ga0187812_11751501	3300017821	Freshwater Sediment	MYYTVNQQIIQARVADLYRQAQQDALARAARQGRRPPKRQSGPGVLRLPVITVRRVLTA
Ga0187820_10016612	3300017924	Freshwater Sediment	MYSTFNHQIAQDRIADMHRQAQRDALAREARQGSQPHKRPSAWHVLRLPIIAFRRVLTA
Ga0187807_10031535	3300017926	Freshwater Sediment	MYYTINQQIIQARVADLHRQAQQDALARAARQGRRPPKCQSGPGVLRLPVITARRVLTAWAAHA
Ga0187807_10873022	3300017926	Freshwater Sediment	MYSTFNHQIAQDRIADMHRQAQQNALAREARQDRRPHKRPSAWHVLRLPVIVARRVLTA
Ga0187806_10219242	3300017928	Freshwater Sediment	MYYTINQQIIQARVADLHRQAQQDALARAARQGRRPPKRQSGPGVLRLPVITARRVLTAWAAHA
Ga0187808_100379703	3300017942	Freshwater Sediment	MYYTINQQIIQARAADLHRQAQQDALARAARQSRRPPKRQSGPGVLRLPVITARRVLTAWAAHA
Ga0187817_100638965	3300017955	Freshwater Sediment	MYYTINQQIIQARVADLHRQAQQDALARAARQGRRPPKRQSGPGVLRLPVTIVRRVLTAWAAHA
Ga0187778_100725452	3300017961	Tropical Peatland	MYYTVNHQIVQARVADLHREAQQDALARAARQGRRPPKSQPGRRILRLPVITARRVLIAWAAHS
Ga0187783_102600553	3300017970	Tropical Peatland	MQSTINQQIMQARVADRHRHAQQEALARAARQARRSPKHESGRHMLRLPIITARRVLTALAAHA
Ga0187781_105903801	3300017972	Tropical Peatland	MHPTFSSQIAQSRVADRHRRAQQDALARAARQGRRPLERQPGIRVRRLRVIAVRRVLTAWAART
Ga0187781_107578612	3300017972	Tropical Peatland	MYYTNSHEIVQARVADLHRQAQQDALARAARQGRRPPKAQSGRHVLRLPVITARRVLIAWAAHT
Ga0187780_110402662	3300017973	Tropical Peatland	MYYTNNHEVVQARVADLRRQAQQDALARAARQGRRPAQRQSERRVLRLPVITARRVLTAWAAHT
Ga0187780_112937791	3300017973	Tropical Peatland	MYSPMNYQIMQARVADLHRQAQRDALARAARQDGRAPKRRSGPGVLRLPVITARRVLTAWAAHA
Ga0187782_104437941	3300017975	Tropical Peatland	MYSTIHHQIMQARVADQHRQAQQDTLARAARQGRRPPKHQSGRRVLRLPVITARRVLTAWAAHT
Ga0187782_109785011	3300017975	Tropical Peatland	MYYTSNHEIVQARIADLHRQAQQDALARAARQGRRPPKSQPGRRILRLPVITARRVLIAW
Ga0187815_101318042	3300018001	Freshwater Sediment	MYYTINQQIIQARVADLYRQAQQDALARAARQGRRPPKRQSGPGVLRLPVITVRRVLTAWAAHA
Ga0187805_101970211	3300018007	Freshwater Sediment	QQIIQARVADLYRQAQQDALARAARQGRRPPKRQSGPGVLRLPVITVRRVLTAWAAHA
Ga0187766_105442971	3300018058	Tropical Peatland	MNSSIHHQIMQTRVADRHRRGRQDALSRAARQGRRPPTRQSGRRVLRLPVITARRALTAWTAHA
Ga0187784_112153802	3300018062	Tropical Peatland	MYYTSNHEIVQARIADLHRQAQQDALARAARQGRRPAQRQSGRRVLRLPVITARRVLTAWAAHT
Ga0210407_114253891	3300020579	Soil	QIMQARVADLHRQAQQDALVRAARQGRRPPKRQSGRGVLRLPVITARRVLTAWAAHA
Ga0210399_100390024	3300020581	Soil	MYSTFNHQIAQDRIADMHRQAQQDALARQARQARQPHKRPSAWHVLRLPVIVARRVLTA
Ga0210404_101399732	3300021088	Soil	REAVVYSDINYQIMQARVADLHRQAQQDAIARAARQGRRPPNRQSGRRVLRLPVITARRVLTAWAAHA
Ga0210405_106550782	3300021171	Soil	MYSTFNHQIAQDRIADMHRQAQQDALARQARQGSQPHKRPSGWHVLRLPIIAFRRVLTA
Ga0210405_107266092	3300021171	Soil	MYPTINHQIMQARVADLHRQAQQDALVRAARQGRRPPKRQSGRGVLRLPVITARRVLTAWAAHA
Ga0210387_102721792	3300021405	Soil	MYPTINHQIMQARVADLHRQAQQDALARAARQGRRPPKRQSGRGVLRLPVITARRVLTAWAAHA
Ga0210390_101137361	3300021474	Soil	VVYSDINYQIMQARVADLHRQAQQDAIARAARQGRRPPNRQSGRRVLRLPVITARRVLTAWAAHA
Ga0210409_101496753	3300021559	Soil	VYSDINYQIMQARVADLHRQAQQDAIARAARQGRRPPNRQSGRRVLRLPVITARRVLTAWAAHA
Ga0126371_100136843	3300021560	Tropical Forest Soil	MYSTINHQIMQTRLADLHRQARQDALARAARQGRRPHQHPSGRRVLRLPIIAARRLLTA
Ga0126371_100576685	3300021560	Tropical Forest Soil	MYSTINHQIAQARIADLHRQAQQDALVRAARSGRRPHKHPSRRHVLRLPIITTRRSITA
Ga0126371_102184802	3300021560	Tropical Forest Soil	MYCTINHREMYSTINHQIARDRIADLHRQAEHDALARAVRQDRRPHERPSGRHVLRLPIIAVRRALTA
Ga0126371_110421661	3300021560	Tropical Forest Soil	KVQPRHWEAVMYSTINHQIAQARIADLHRQAQQAALARTARRGRRPHKHVPGRHVLRLPIITRRRAITA
Ga0126371_113615632	3300021560	Tropical Forest Soil	EMYPTINHREMYSTIDRQIARDRIADLHRQAQRDALARAAEGRRPHERPSRRHVLWLPIIAVRRALTA
Ga0126371_121379811	3300021560	Tropical Forest Soil	MCSTINHQEMYSTISHQIGRDRIADMHRRAQHGALARAARQGRRPHKGPSGRHVLRLPIIVVRRALTA
Ga0126371_127092201	3300021560	Tropical Forest Soil	MYCTINHQEMYSTINHQIARDRIPDLHRQAQQDALARAVRQGRRPHER
Ga0222756_10721931	3300022709	Soil	QIMQARVADLHRQAQQDAIARAARQGRRPPKRQSGRRVLRLPVITARRVLTAWAAHA
Ga0207684_112947371	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MYSTVNYQIAQDRIADLHRQAQHDALARAARQGRRPRKHRSGHRVPRFPVIAARRVLIALGAHT
Ga0209773_101599551	3300027829	Bog Forest Soil	MYSTINYQIMQARVADLHRQAQQDALARAARQGRRPPKHQSERGVLRLPVITARRALTAWAAHS
Ga0209693_100473752	3300027855	Soil	MYYTINHQIMQARVADLHRQAQQDAMARAVRQGRRPPKRQSGRRVLRLPVITARRVLTAWAAHA
Ga0209693_105527401	3300027855	Soil	MYSTINHQIMQARVADLHRQAQQDALARAARQGRRPPKHQSGRRVLRLPVITARRVLTAWAAHA
Ga0209465_103818521	3300027874	Tropical Forest Soil	MYCTTNHQEMYSTIHRQIARDRIADLHRRAQHDALARAAQGRPHKRPSARHVLRLPIIAGRRALTA
Ga0209380_100112403	3300027889	Soil	MYYTINHQIMQARVADLHRQAQQDTLARAARQGRRPPKRQSGRRVFRLPVITARRVLTAWAAHA
Ga0209380_100175035	3300027889	Soil	MYSTINHQIMQARVADLHRQAQQDALARAARQGSRPPEHQSGRRVLRLPVITVRRVLTAWAAHA
Ga0302325_102232782	3300031234	Palsa	MHPTLSSQIAQAMVADRHRRAEQDALARTARQARRPHERRPWIRVPRLPVIIARRVLTA
Ga0318516_103756931	3300031543	Soil	TSSHQEMYSTINYQIARDQIADLHRKAQHGALARAARQGRRPHERQSGRHVLRLPVIAVRRALTA
Ga0318534_101812202	3300031544	Soil	MYSTSSHQEMYSTINYQIARDQIADLHRKAQHGALARAARQGRRPHERQSGRHVLRLPVIAVRRALTA
Ga0318534_102543512	3300031544	Soil	MNSSIHHQIMQTRVADRHRRGQRDALSRAARQGRRPPTRQSGRRVLRLPVITARRVLTAWAAHA
Ga0318538_104411541	3300031546	Soil	MYRSINHQIATDRTADLHRRAQRDALTRAARQGRPHERPSGRHVLRLPIIVVRRALTA
Ga0318555_101922972	3300031640	Soil	MYSTSKYQEMYSTINHQIARDRIADLHRKAQHGALARTARQGRRPHERPSGRHVLRLPVIAVRRALTA
Ga0318542_100999451	3300031668	Soil	MYPTINHQEMYATIHHQIARDRIADLHRRAQHDALASAAGQGRPHKRLSGRHVLRLPIIAGRRALTA
Ga0318542_103442571	3300031668	Soil	MYSTSKYQEMYSTINHQIARDRIADLHRKAQHGALARTARQGRRPHER
Ga0318574_108964032	3300031680	Soil	FCGHATIATDRTADLHRRAQRDALTRAARQGRPHERPSGRHVLRLPIIVVRRALTA
Ga0318560_101306141	3300031682	Soil	MNSSIHHQIMQTRVADRHRRGQRDALSRAARQGRRPPTRQSGRRVLRLPVITARRVLTAW
Ga0310686_1108032775	3300031708	Soil	MYSTINHQIMQARVADMHRQAQQDTLARAARQGRRPPEHQSGRRVLRLPVITARRLLTAWAAHA
Ga0310686_1175061362	3300031708	Soil	MYSTFNHQIAQDRIADMHRQAQQDALAREARQDRRPHKRPSAWHVLRLPVIVARRVLTA
Ga0318502_104969233	3300031747	Soil	AEMYSNINHQIAQDRIADMHRQAQQDALARHARAGRQSHKRPSGWHVLRLPVIVARRLRT
Ga0318535_104080521	3300031764	Soil	AGAKLAAKVQPDHREAEMYRSINHQIATDRTADLHRRAQRDALTRAARQGRPHERPSGRHVLRLPIIVVRRALTA
Ga0318509_108303802	3300031768	Soil	MYSNIYHQNAQDRIADMHRRAQQDTLARQADQGRRSQKRPSRWHVLRLPVIAVRRALTA
Ga0318547_101455671	3300031781	Soil	MYSTINHQIARDRIADLHRKAQHGALARTARQGRRPHERPSGRHVLRLPVIAVRRALTA
Ga0318523_103924052	3300031798	Soil	MYSTSKYQEMYSTINHQIARDRIADLHRKAQHGALARTARQGRRPHERPSGRHVLR
Ga0306923_116379812	3300031910	Soil	MYSTSSHQEMYSTINYQIARDQIADLHRKAQHGALARAARQGRRPHERQSGRHVL
Ga0306921_121822141	3300031912	Soil	MYSTSSHQEMYSTINYQIARDQIADLHRKAQHGALARAARQGRRPHERQSGRH
Ga0306921_127667071	3300031912	Soil	MYPTINHQEMYATIHHQIARDRIADLHRRAQHAARASAAGQGRPHKRLSGRHVLRLPIIVVRRALTA
Ga0310912_109966051	3300031941	Soil	MYSTSKYQEMYSTINHQIARDRIADLHRKAQHGALARTARQGRRPHERPSGRHVLRLPIIVVRRALTA
Ga0310909_103287411	3300031947	Soil	YSTSSHQEMYSTINYQIARDQIADLHRKAQHGALARAARQGRRPHERQSGRHVLRLPVIAVRRALTA
Ga0306926_119246801	3300031954	Soil	PPASPEAVMNSSIHHQIMQTRVADRHRRGQRDALSRAARQGRRPPTRQSGRRVLRLPVITARRVLTAWAAHA
Ga0318506_100873623	3300032052	Soil	TINYQIARDQIADLHRKAQHGALARAARQGRRPHERQSGRHVLRLPVIAVRRALTA
Ga0318506_103858721	3300032052	Soil	AKMYRSINHQIATDRTADLHRRAQRDALTRAARQGRPHERPSGRHVLRLPIIVVRRALTA
Ga0318505_102973431	3300032060	Soil	DPPASPEAVMNSSIHHQIMQTRVADRHRRGQRDALSRAARQGRRPPTRQSGRRVLRLPVITARRVLTAWAAHA
Ga0318504_103896541	3300032063	Soil	MYSTSSHQEMYSTINYQIARDQIADLHRKAQHGALARTARQGRRPHERPSGRHVLRLPVIAVR
Ga0318510_103664781	3300032064	Soil	SKYQEMYSTINHQIARDRIADLHRKAQHGALARTARQGRRPHERPSGRHVLRLPVIAVRRALTA
Ga0318514_100554014	3300032066	Soil	MYSTSKYQEMYSTINHQIARDRIADLHRRAQHDALASAAGQGRPHKRLSGRHVLRLPIIAGRRALTASRAHAGSHD
Ga0318525_104877771	3300032089	Soil	AGKVQPDHREAEMYPTINHQEMYATIHHQIARDRIADLHRRAQHDALASAAGQGRPHKRLSGRHVLRLPIIAGRRALTA
Ga0311301_111337782	3300032160	Peatlands Soil	MYSTFNHQIAQDRIADMHRQAQQDALARQARQDRQDRRPHKRPSAWHVLRLPVIVARRVLTA
Ga0335075_108218681	3300032896	Soil	IMQARVADLHRQAQQDAMARAARQGRRPPKHESGRRVLRLPVITARRALTAWAAQA
Ga0335073_111944721	3300033134	Soil	MYYSSNHQMIQARAADLHRQAQQDALARAARQGRRALKRQPGRRVLRLPAITARRVLTAWAART
Ga0318519_104224101	3300033290	Soil	RSINHQIATDRTADLHRRAQRDALTRAARQGRPHERPSGRHVLRLPIIVVRRALTA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061995

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences