Metagenome / Metatranscriptome Family F062008

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F062008
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	57 residues
Representative Sequence	MVYEQYDFARNPIVENQVFFLESKCIRCGSSVLAGSLEELLQEEKRHRALCRLMRAA
Number of Associated Samples	76
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	90.84 %
% of genes near scaffold ends (potentially truncated)	13.74 %
% of genes from short scaffolds (< 2000 bps)	63.36 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (81.679 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (43.511 % of family members)
Environment Ontology (ENVO)	Unclassified (55.725 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (79.389 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.53% β-sheet: 9.41% Coil/Unstructured: 67.06%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF13533	Biotin_lipoyl_2	17.56
PF03372	Exo_endo_phos	9.16
PF13581	HATPase_c_2	8.40
PF08281	Sigma70_r4_2	4.58
PF00873	ACR_tran	3.05
PF13620	CarboxypepD_reg	2.29
PF00529	CusB_dom_1	2.29
PF00106	adh_short	1.53
PF02321	OEP	1.53
PF07813	LTXXQ	1.53
PF03807	F420_oxidored	1.53
PF00912	Transgly	0.76
PF13561	adh_short_C2	0.76
PF00440	TetR_N	0.76
PF01041	DegT_DnrJ_EryC1	0.76
PF16576	HlyD_D23	0.76
PF11897	DUF3417	0.76
PF02457	DAC	0.76
PF01850	PIN	0.76
PF01408	GFO_IDH_MocA	0.76
PF12804	NTP_transf_3	0.76
PF00482	T2SSF	0.76
PF00905	Transpeptidase	0.76
PF07883	Cupin_2	0.76
PF13505	OMP_b-brl	0.76
PF13492	GAF_3	0.76
PF01039	Carboxyl_trans	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	6.11
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	3.05
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.76
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.76
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.76
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.76
COG0744	Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase	Cell wall/membrane/envelope biogenesis [M]	0.76
COG0777	Acetyl-CoA carboxylase beta subunit	Lipid transport and metabolism [I]	0.76
COG0825	Acetyl-CoA carboxylase alpha subunit	Lipid transport and metabolism [I]	0.76
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	0.76
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.76
COG4799	Acetyl-CoA carboxylase, carboxyltransferase component	Lipid transport and metabolism [I]	0.76
COG4953	Membrane carboxypeptidase/penicillin-binding protein PbpC	Cell wall/membrane/envelope biogenesis [M]	0.76
COG5009	Membrane carboxypeptidase/penicillin-binding protein	Cell wall/membrane/envelope biogenesis [M]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.68 %
Unclassified	root	N/A	18.32 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.68 %
Unclassified	root	N/A	18.32 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.68 %
Unclassified	root	N/A	18.32 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	31.30 %
Unclassified	root	N/A	18.32 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	17.56 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	21.37 %
Unclassified	root	N/A	18.32 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	17.56 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	6.11 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	21.37 %
Unclassified	root	N/A	18.32 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	17.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.11 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	21.37 %
Unclassified	root	N/A	18.32 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	17.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.32 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	17.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.11 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	3.05 %
Alloacidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium	3.05 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.32 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	17.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.11 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	3.05 %
Alloacidobacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	3.05 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	1.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.32 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	17.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.11 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	3.05 %
Alloacidobacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	3.05 %
Granulicella sp. GAS466	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. GAS466	1.53 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_12645418	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1107	Open in IMG/M
3300000955\|JGI1027J12803_102989441	All Organisms → cellular organisms → Bacteria	1476	Open in IMG/M
3300001084\|JGI12648J13191_1011612	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	852	Open in IMG/M
3300001166\|JGI12694J13545_1017816	Not Available	682	Open in IMG/M
3300001867\|JGI12627J18819_10000105	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	29537	Open in IMG/M
3300002245\|JGIcombinedJ26739_100003522	All Organisms → cellular organisms → Bacteria	11439	Open in IMG/M
3300003352\|JGI26345J50200_1001640	All Organisms → cellular organisms → Bacteria	2020	Open in IMG/M
3300003505\|JGIcombinedJ51221_10001625	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	5825	Open in IMG/M
3300003505\|JGIcombinedJ51221_10029895	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1978	Open in IMG/M
3300003505\|JGIcombinedJ51221_10034592	All Organisms → cellular organisms → Bacteria	1858	Open in IMG/M
3300005533\|Ga0070734_10002972	All Organisms → cellular organisms → Bacteria	18938	Open in IMG/M
3300005541\|Ga0070733_10644460	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	711	Open in IMG/M
3300005541\|Ga0070733_10668589	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	697	Open in IMG/M
3300005542\|Ga0070732_10001555	All Organisms → cellular organisms → Bacteria	12534	Open in IMG/M
3300005591\|Ga0070761_10000561	All Organisms → cellular organisms → Bacteria	23992	Open in IMG/M
3300005591\|Ga0070761_10110946	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1588	Open in IMG/M
3300005591\|Ga0070761_10194073	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
3300005591\|Ga0070761_10308189	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300005591\|Ga0070761_10506358	Not Available	745	Open in IMG/M
3300005602\|Ga0070762_10003711	All Organisms → cellular organisms → Bacteria	7315	Open in IMG/M
3300005602\|Ga0070762_10032224	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2811	Open in IMG/M
3300005602\|Ga0070762_10037434	All Organisms → cellular organisms → Bacteria	2627	Open in IMG/M
3300005921\|Ga0070766_10159865	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1386	Open in IMG/M
3300006176\|Ga0070765_100359370	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1355	Open in IMG/M
3300009616\|Ga0116111_1019340	All Organisms → cellular organisms → Bacteria	2428	Open in IMG/M
3300009630\|Ga0116114_1108067	Not Available	733	Open in IMG/M
3300009784\|Ga0123357_10822193	Not Available	622	Open in IMG/M
3300009826\|Ga0123355_10001078	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	37695	Open in IMG/M
3300009826\|Ga0123355_10562195	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1373	Open in IMG/M
3300009839\|Ga0116223_10143526	All Organisms → cellular organisms → Bacteria → Acidobacteria	1485	Open in IMG/M
3300010341\|Ga0074045_10057617	All Organisms → cellular organisms → Bacteria	2785	Open in IMG/M
3300017970\|Ga0187783_10015099	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5696	Open in IMG/M
3300018057\|Ga0187858_10152204	All Organisms → cellular organisms → Bacteria → Acidobacteria	1541	Open in IMG/M
3300020579\|Ga0210407_10000031	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	205648	Open in IMG/M
3300020579\|Ga0210407_10014267	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	5904	Open in IMG/M
3300020579\|Ga0210407_10048556	All Organisms → cellular organisms → Bacteria	3166	Open in IMG/M
3300020579\|Ga0210407_10140040	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1860	Open in IMG/M
3300020579\|Ga0210407_11367782	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300020580\|Ga0210403_10013871	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6502	Open in IMG/M
3300020580\|Ga0210403_10031856	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	4217	Open in IMG/M
3300020580\|Ga0210403_10159201	All Organisms → cellular organisms → Bacteria	1848	Open in IMG/M
3300020580\|Ga0210403_10489194	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300020580\|Ga0210403_10614960	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	876	Open in IMG/M
3300020580\|Ga0210403_11308996	Not Available	553	Open in IMG/M
3300020581\|Ga0210399_10259164	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1450	Open in IMG/M
3300020581\|Ga0210399_10268426	All Organisms → cellular organisms → Bacteria	1424	Open in IMG/M
3300020582\|Ga0210395_10004288	All Organisms → cellular organisms → Bacteria	10975	Open in IMG/M
3300020582\|Ga0210395_10024213	All Organisms → cellular organisms → Bacteria	4460	Open in IMG/M
3300020582\|Ga0210395_10035348	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	3664	Open in IMG/M
3300020582\|Ga0210395_10619464	Not Available	812	Open in IMG/M
3300020582\|Ga0210395_11098380	Not Available	587	Open in IMG/M
3300020583\|Ga0210401_10193020	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1894	Open in IMG/M
3300020583\|Ga0210401_10250212	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1631	Open in IMG/M
3300020583\|Ga0210401_10427749	All Organisms → cellular organisms → Bacteria	1187	Open in IMG/M
3300020583\|Ga0210401_10716030	Not Available	861	Open in IMG/M
3300021088\|Ga0210404_10773690	Not Available	548	Open in IMG/M
3300021168\|Ga0210406_10002159	All Organisms → cellular organisms → Bacteria	22879	Open in IMG/M
3300021168\|Ga0210406_10913440	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300021170\|Ga0210400_10085570	All Organisms → cellular organisms → Bacteria	2482	Open in IMG/M
3300021171\|Ga0210405_10024051	All Organisms → cellular organisms → Bacteria	4914	Open in IMG/M
3300021171\|Ga0210405_10228179	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1474	Open in IMG/M
3300021171\|Ga0210405_10611907	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	848	Open in IMG/M
3300021171\|Ga0210405_10933920	Not Available	657	Open in IMG/M
3300021178\|Ga0210408_10319623	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300021180\|Ga0210396_10014468	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7345	Open in IMG/M
3300021180\|Ga0210396_10015118	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7177	Open in IMG/M
3300021180\|Ga0210396_10570465	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300021181\|Ga0210388_10017465	All Organisms → cellular organisms → Bacteria	5763	Open in IMG/M
3300021181\|Ga0210388_10043124	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3744	Open in IMG/M
3300021402\|Ga0210385_10017231	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4512	Open in IMG/M
3300021402\|Ga0210385_10058168	All Organisms → cellular organisms → Bacteria	2601	Open in IMG/M
3300021403\|Ga0210397_10204876	All Organisms → cellular organisms → Bacteria	1412	Open in IMG/M
3300021403\|Ga0210397_10315598	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1151	Open in IMG/M
3300021403\|Ga0210397_10582116	Not Available	854	Open in IMG/M
3300021404\|Ga0210389_10002316	All Organisms → cellular organisms → Bacteria	15081	Open in IMG/M
3300021405\|Ga0210387_10188130	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1786	Open in IMG/M
3300021405\|Ga0210387_10324868	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1356	Open in IMG/M
3300021405\|Ga0210387_10360092	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1286	Open in IMG/M
3300021405\|Ga0210387_10384283	All Organisms → cellular organisms → Bacteria	1243	Open in IMG/M
3300021406\|Ga0210386_10125576	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2126	Open in IMG/M
3300021420\|Ga0210394_10159268	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1962	Open in IMG/M
3300021420\|Ga0210394_10369839	All Organisms → cellular organisms → Bacteria	1260	Open in IMG/M
3300021420\|Ga0210394_10561043	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1004	Open in IMG/M
3300021420\|Ga0210394_10680492	Not Available	902	Open in IMG/M
3300021433\|Ga0210391_10000312	All Organisms → cellular organisms → Bacteria	55655	Open in IMG/M
3300021439\|Ga0213879_10082655	Not Available	885	Open in IMG/M
3300021477\|Ga0210398_10889162	Not Available	714	Open in IMG/M
3300021479\|Ga0210410_10000036	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	237906	Open in IMG/M
3300021559\|Ga0210409_11416237	Not Available	571	Open in IMG/M
3300022532\|Ga0242655_10035847	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1159	Open in IMG/M
3300022557\|Ga0212123_10220568	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1386	Open in IMG/M
3300022557\|Ga0212123_10770075	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300022722\|Ga0242657_1076785	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300025442\|Ga0208034_1050495	Not Available	864	Open in IMG/M
3300027034\|Ga0209730_1022128	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300027061\|Ga0209729_1018025	Not Available	841	Open in IMG/M
3300027080\|Ga0208237_1022390	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	951	Open in IMG/M
3300027297\|Ga0208241_1014203	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1147	Open in IMG/M
3300027326\|Ga0209731_1034133	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300027652\|Ga0209007_1003263	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4585	Open in IMG/M
3300027826\|Ga0209060_10001537	All Organisms → cellular organisms → Bacteria → Acidobacteria	24862	Open in IMG/M
3300027842\|Ga0209580_10699222	Not Available	501	Open in IMG/M
3300027853\|Ga0209274_10000243	All Organisms → cellular organisms → Bacteria → Acidobacteria	41074	Open in IMG/M
3300027853\|Ga0209274_10089059	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1511	Open in IMG/M
3300027855\|Ga0209693_10177813	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	1049	Open in IMG/M
3300027867\|Ga0209167_10601239	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	602	Open in IMG/M
3300027879\|Ga0209169_10027585	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3026	Open in IMG/M
3300027889\|Ga0209380_10681537	Not Available	591	Open in IMG/M
3300027895\|Ga0209624_10000415	All Organisms → cellular organisms → Bacteria → Acidobacteria	37570	Open in IMG/M
3300027895\|Ga0209624_10347368	Not Available	989	Open in IMG/M
3300027908\|Ga0209006_10001575	All Organisms → cellular organisms → Bacteria	20719	Open in IMG/M
3300030940\|Ga0265740_1014344	Not Available	760	Open in IMG/M
3300031708\|Ga0310686_113741424	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300031708\|Ga0310686_113871795	All Organisms → cellular organisms → Bacteria	2918	Open in IMG/M
3300031715\|Ga0307476_10054850	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2726	Open in IMG/M
3300031715\|Ga0307476_10083544	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2232	Open in IMG/M
3300031715\|Ga0307476_10100761	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. GAS466	2039	Open in IMG/M
3300031715\|Ga0307476_10148513	All Organisms → cellular organisms → Bacteria	1682	Open in IMG/M
3300031715\|Ga0307476_11051149	Not Available	599	Open in IMG/M
3300031718\|Ga0307474_10011548	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6400	Open in IMG/M
3300031718\|Ga0307474_10041172	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. GAS466	3405	Open in IMG/M
3300031718\|Ga0307474_10250353	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300031753\|Ga0307477_10461469	Not Available	866	Open in IMG/M
3300031823\|Ga0307478_10489538	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1024	Open in IMG/M
3300031823\|Ga0307478_10528555	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	984	Open in IMG/M
3300031962\|Ga0307479_10311892	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1555	Open in IMG/M
3300032174\|Ga0307470_10017249	All Organisms → cellular organisms → Bacteria	3163	Open in IMG/M
3300032180\|Ga0307471_103656183	Not Available	544	Open in IMG/M
3300032180\|Ga0307471_103770221	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300032205\|Ga0307472_100438787	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1106	Open in IMG/M
3300032515\|Ga0348332_12596903	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.71%
Host-Associated	Host-Associated	2.29%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.37%
Aquatic	Environmental → Aquatic	5.34%
Arthropoda	Host-Associated → Arthropoda	2.29%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.60%
Freshwater	Environmental → Aquatic → Freshwater	3.82%
Digestive System	Host-Associated → Arthropoda → Digestive System	2.29%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.53%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.41%
Loam	Environmental → Terrestrial → Soil → Loam	23.66%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.82%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	2.29%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.53%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.53%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	55.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	23.66%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.16%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.29%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	2.29%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.53%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.53%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.53%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.53%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	43.51%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	12.21%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	12.21%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	11.45%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.34%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.29%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	2.29%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.53%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.76%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.76%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.76%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.76%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.76%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.76%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.76%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001084	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1	Environmental	Open in IMG/M
3300001166	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003352	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009784	Embiratermes neotenicus P4 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P4	Host-Associated	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025442	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100 (SPAdes)	Environmental	Open in IMG/M
3300027034	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027061	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027080	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF009 (SPAdes)	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300027326	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300030940	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_126454182	3300000789	Soil	MVDEQYDFAXNPIVANQVFFLESKCSRCDFSVLARSIEELLQEEKRHRALCRLMRAT*
JGI1027J12803_1029894413	3300000955	Soil	MVDEQYDFARNPIVANQVFFLESKCSRCDFSVLARSIEELLQEEKRHRALCRLMRAT*
JGI12648J13191_10116122	3300001084	Forest Soil	MVYEQYDFARNPVVENRVFLLESKCIRCGSSVLARSLEELLKEEKRHRALCRLMRAAK*
JGI12694J13545_10178162	3300001166	Forest Soil	MVYEHYDFARNPIVENQVFLLESKCIRCGSSVLARSLEELLKEEKSHRALCRLMRAAK*
JGI12627J18819_1000010531	3300001867	Forest Soil	MVNEQYDFIRNPIVADQVFFFESKCSRCDFSVLARSIEELLQEEKRHRALCSLIRARS*
JGIcombinedJ26739_1000035223	3300002245	Forest Soil	MVFEHHDFTRNPIVDDQVFFLESKCIRCGSSALARSLEELLEEENRHRAECRAIRASS*
JGI26345J50200_10016402	3300003352	Bog Forest Soil	MVYEQYDFTRNPIVEDQEFSLESKCIHCSSSVVARSLEELLQEEKRHRALCRLMRAT*
JGIcombinedJ51221_100016256	3300003505	Forest Soil	MVYEQHDFTRNPIVEDQEFSLESKCIRCGSSVLAHSLEELLEEEKRHRGECIPKRSAS*
JGIcombinedJ51221_100298951	3300003505	Forest Soil	MVNEQYDFVRNPIVANQVFFLESKCSRCDFSVLARSIEELLQEEKRHRALCSLMRATS*
JGIcombinedJ51221_100345923	3300003505	Forest Soil	MVFEQYDFVRNPIVEDQVFFLESKCIRCGSSVLAPSLEELLEEEDRHRAECRVKRAS*
Ga0070734_100029728	3300005533	Surface Soil	MVYEQYDFIRNPIVENQVFFPESKCVRCGFSVVAGSLEELLEEEKGHRAECTPKRAVS*
Ga0070733_106444602	3300005541	Surface Soil	MVYEHYDFTRNPIVEDQVFFLESKCIRCGSSVLASSLEELLEEEKRHREQCSPKRAA*
Ga0070733_106685892	3300005541	Surface Soil	MVFEEYDFTRNPIVEDQEFFLESRCIRCGSSVMARSLEELLQEEKRHRGLCRLKRAT*
Ga0070732_100015556	3300005542	Surface Soil	MVYEQYDFARNAVVEDHEFSLESKCIRCSFVVVARSLEELLEEEKRHRALCTPKRATS*
Ga0070761_1000056110	3300005591	Soil	MVYEQYDFTRNPIVEDQEFSLESKCIRCGCSVVAGSLEELLQEETHHRSLCRLTRAA*
Ga0070761_101109461	3300005591	Soil	MVYEQYDFTRNPIVEDQEFSLESKCIRCDFSVLARSLEELLQEETRHRALCSLMRAT*
Ga0070761_101940732	3300005591	Soil	MKLEEYDFTRNPIVENQTFFLESKCVHCGLAVLGSSLEELLKEEDRHRAQCMLKRAA*
Ga0070761_103081891	3300005591	Soil	MVYEQYDFTRNPIVEDQEFSLESKCIRCGSSVVARSREELLEEEKRHRVQCRLMRAS*
Ga0070761_105063581	3300005591	Soil	MVYEQYDFTRNPIVEDHEFSLESKCIRCGSSVLARSLEELLEEEKRHRAECRLMRAA*
Ga0070762_1000371111	3300005602	Soil	MVYEQHDFTRNPIVEDQVFFLESKCIRCGSSVLAGSLEELLAEEKRHRGQCRLMRAT*
Ga0070762_100322241	3300005602	Soil	MVYEHYDFARNPIVADQVFFLESKCTRCGLSVLAQSIEELLQEEERHRALCRLMRAAQ*
Ga0070762_100374343	3300005602	Soil	MVYEQHDFARNPIVEDQEFSLESKCSRCGFSVVARSLEELLQEEKRHRALCKLMRAA*
Ga0070766_101598653	3300005921	Soil	MVYEQYDFARNPIVRNQVFFLQSKCSRCDYSVLAGSLEELLQEEKRHRALCRLMRAT*
Ga0070765_1003593703	3300006176	Soil	MVYEQYDFARNPIVANQVFFLESKCRRCDFLVLASSLEELLQEEKRHRPLCRLMRAI*
Ga0116111_10193402	3300009616	Peatland	MKLEEYDFTRNPIVENQTFFLEFKCVHCGFAVLGSSLEELLKEEDRHRVQCMLKRAAS*
Ga0116114_11080672	3300009630	Peatland	VKGVAVMKLEEYDFTRNPIVENQTFFLESKCVHCGFAVLGSSLEELLKEEDRHRAQCMLKRAAS*
Ga0123357_108221931	3300009784	Termite Gut	MVYEQHDFARNPIVEGQEFSLESKCIRCSFSVVAGSLEKLLEEEKLHRAECIARRAA*
Ga0123355_1000107828	3300009826	Termite Gut	MVYEKYDFARSPIVENQQFSLESQCIRCGSSVVARSLEQLLEEEKRHREECIAKRAAS*
Ga0123355_105621952	3300009826	Termite Gut	MVYEQYDFARNPIVEGQEFSLESKCIRCSFSVVAGSLEKLLEEEKLHRAECIARRAA*
Ga0116223_101435262	3300009839	Peatlands Soil	MKLEEYDFTRNPIVENQSFFLESKCVHCGFAVLGSSLEELLKEEDRHRAQCMLKRAAS*
Ga0074045_100576172	3300010341	Bog Forest Soil	MKLEEYDFTRNPIVENQTFFLESKCVHCGFAVLGSSLEELLKEEDRHRAQCMLKRAAS*
Ga0187783_100150995	3300017970	Tropical Peatland	MVFEGYDFTRNPIVDNQTFLLESKCVHCGVAVVADSLEELLEEEKRHRVRCTSRRTA
Ga0187858_101522042	3300018057	Peatland	MKLEEYDFTRNPIVENQTFFLEFKCVHCGFAVLGSSLEELLKEEDRHRVQ
Ga0210407_1000003114	3300020579	Soil	MVYEQYDFTRNPIVEDQVFFLESKCIRCGSSVLARSLEELLQEEKRHWTECRVMHTA
Ga0210407_100142676	3300020579	Soil	MVYEHYDFTRNPIVEDQEFSLESKCIRCDFSVLARSLEELLEEEKRHRPVCRLMLTT
Ga0210407_100485564	3300020579	Soil	MVYEHYDFARNPIVADQVFFLESKCTRCGLSVLAQSIEELLQEEERHRALCRLMRAAQ
Ga0210407_101400402	3300020579	Soil	MVYEQYDFTRNPIVEDQEVSLESKCIRCGSSVVARSREELLEEEKRHRVQCRLMRAS
Ga0210407_113677822	3300020579	Soil	HKIEDWPFMVYEHYDFARNPIVENQVFFLQSKCIRCGCSVLAGSLEELLQEEKRHRALCRLMRAR
Ga0210403_100138719	3300020580	Soil	MVYEHYDFARNPIVENQVFFLQSKCIRCGCSVLAGSLEELLQEEKRHRALCRLMRAR
Ga0210403_100318563	3300020580	Soil	MVYEQYDFTRNPIVEDQVFFLESKCIRCGSSVLAHSLEELLEEERRHRTECRVMRAA
Ga0210403_101592013	3300020580	Soil	MVYEQHDFTRNPIVEDQEFSLESKCIRCGSSVLAHSLEELLEEEKRHRGECIPKRSAS
Ga0210403_104891942	3300020580	Soil	MVYEQYDFTRNPIVEDQEFSLESKCIRCGSSVVARSREELLEEEKRHRVQCRLMRAS
Ga0210403_106149601	3300020580	Soil	MVYEQYDFTRNPIVEDQVFFLESKCIRCGSSVLAGSLEELLHEEKRHRTECRVMHTA
Ga0210403_113089962	3300020580	Soil	MVYEQYDFTRNPIVEDQEFSLESKCIRCDFSVLARSLEELLEEEKRHRPVCRLMLTT
Ga0210399_102591642	3300020581	Soil	MVNEQYDFVRNPIVSNQVFFLESKCSRCDFSVLARSIEDLLQEEKRHRALCMLMRATS
Ga0210399_102684261	3300020581	Soil	MVYEQYDFARNPIVENQVFFLQSKCIRCGCSVLAGSLEELLPEEKRHRALCRLMRAA
Ga0210395_100042885	3300020582	Soil	MVFEQYDFVRNPIVEDQVFFLESKCIRCGSSVLAPSLEELLEEEDRHRAECRVKRAS
Ga0210395_100242134	3300020582	Soil	MVYEQYDFARSPIVEDQEFSLESKCVRCGFSVVARSLGELLEEEKRHRADCMPKRAVS
Ga0210395_100353484	3300020582	Soil	MVYEQYDFARNPIVEDQVFFLESKCIRCGSSVSARSVEELLHEEKRHRTECRVMHTA
Ga0210395_106194641	3300020582	Soil	MVYEQYDFARNPIVENQVFFLQSKCIRCGCSVLAGSLEELLQEEKRHRALCRLMRAR
Ga0210395_110983801	3300020582	Soil	MVYEQYDFTRNPIVEDQEFSLESKCIRCDFSVLARSLEELLEEEKRHRP
Ga0210401_101930201	3300020583	Soil	MVYEQYDFTRNPIVEDQEFSLESKCLRCGSSVVARSREELLEEAKRHRAQCRLMRAS
Ga0210401_102502121	3300020583	Soil	MVYEHYDFTRNPIVEDQVFFLESKCIRCGSSVLASSLEELLEDEKRHREQCGPKRAA
Ga0210401_104277491	3300020583	Soil	SLNARSKEWPFMVYEQYDFARNPIVENQVFFLESKCIRCGSSVLAGSLEELLEEEKRHRGQCRLMRAT
Ga0210401_107160301	3300020583	Soil	MVYEQYDFTRNPIVEDQVFFLESKCIRSGSSVLARSLEELLEEEKRHRTECRVMHTA
Ga0210404_107736902	3300021088	Soil	MVYEQYDFARNPIVENQVFFFESKCIRCGSSILASSLEELLEEEECHRAQCTLMRPTS
Ga0210406_1000215914	3300021168	Soil	MVYEQYDFARNPIVENQVFFFESKCIRCGSSILASSLEELLEEEECHRAQCTLMRATS
Ga0210406_109134401	3300021168	Soil	MVYEQYDFTRNPIVEDQEFSLESKCIRCGFSVVASSLEELLEQEKRHRG
Ga0210400_100855705	3300021170	Soil	MVYEQHDFTRNPIVEDQVFFLESKCIRCGSSVLAGSLEELLAEEKRHRGQCRLMRAT
Ga0210405_100240513	3300021171	Soil	MVYEQYDFTRNPIVEDQEFSLESKCIRCGFSVLAGSLEELLQEEKRHRALCRLMRVR
Ga0210405_102281792	3300021171	Soil	MVYEQYDFARNPIVENQVFFLQSKCIRCGCSVLAGSLEELLREEKRHRALCR
Ga0210405_106119073	3300021171	Soil	MVYEQYDFTRNPIVEDQKFFLESKCFRCGSSVVARSLEELLQEEKRHRG
Ga0210405_109339201	3300021171	Soil	MVYEQYDFTRNPIVKDQEFSLESKCIRCGSSVVARSREELLEEEKRHRAQCRLMRAS
Ga0210408_103196232	3300021178	Soil	MVYEQYDFARNPIVENQVFFLESKCIRCGSSVLAGSLEELLEEEKRHRGQCRLMRAT
Ga0210396_100144687	3300021180	Soil	MVYEQYDFARNPIVEDQEFSLESKCIRCGFSVVAGSLEELLQEEKRHRGLCRLMRVTQ
Ga0210396_100151182	3300021180	Soil	MVYEHYDFTRNPIVEDQVFFLESKCIRCGSSVLASSLEELLEEEKRHREQCSPKRAA
Ga0210396_105704652	3300021180	Soil	MVYEQYDFTRNPIVEDQVFFLESKCIRCGSSVLARSLEELLHEEKRHRTECRAMHTA
Ga0210388_100174653	3300021181	Soil	MVYEHYDFTRNPIVEDQVFFLESKCIRCGSSVLASSLEELLEEEKRHREQCGPKRAA
Ga0210388_100431243	3300021181	Soil	MVYEQHDFARNPIVEDQEFSLESKCSRCGSSVVARSLEELLQEEKRHRALCKLMRAT
Ga0210385_100172316	3300021402	Soil	MVYEQYDFTRNPIVEDHEFSLESKCIRCGSSVLARSLEELLEEEKRHRAECRLMRAA
Ga0210385_100581683	3300021402	Soil	MVYEHYDFTRNPIVEDQVFFLESKCISCGSSVLASSLGELLEEEKRHREQCGPKRAA
Ga0210397_102048761	3300021403	Soil	DFTRNPIVEDQEFSLESKCIRCGSSVVARSREELLEEEKRHRVQCRLMRAS
Ga0210397_103155983	3300021403	Soil	CARNPIVADQVFFLESKCTRCGLSVLAQSIEELLQEEERHRALCRLMRAAQ
Ga0210397_105821161	3300021403	Soil	MVYEQYDFARSPIVEDQEFSLESKCVRCGFSVVARTLGELLEEEKRHRADCMPKRAVS
Ga0210389_100023164	3300021404	Soil	MVFEQYDFVRNPIIEDQVFFLESKCIRCGSSVLEPSLEELLEEEDRHRAECRVKRAS
Ga0210387_101881302	3300021405	Soil	MVYEEYDFARNPIVENQVFFFESKCSRCGSSVLSCSLEELLEEENRHRVECRLMRAT
Ga0210387_103248683	3300021405	Soil	MVYEHYDFARNPIVADQVFFLESKCTRCGLSVLAQSIEELLQEEDHHRALCRLMRAAQ
Ga0210387_103600922	3300021405	Soil	MVYEHYDFTRNPIVEDQVFFLESKCIRCGSSVLASSLEELLEEEKRHREQCG
Ga0210387_103842831	3300021405	Soil	MVYEHYDFARNPIVENQVFFLQSKCIRCGCSVLAGSLEELLQEEKRHRALCRLMRAA
Ga0210386_101255762	3300021406	Soil	MVNEQYDFVRNPIVSNQVFFLESKCSRCDFSVLARSIEDLLQEEKRHRALCMLRATS
Ga0210394_101592682	3300021420	Soil	MVYEQYDFARNPIVENQVFFLESKCIRCGSSVLAGSLEELLQEEKRHRALCRLMRAA
Ga0210394_103698392	3300021420	Soil	MVYEQYDFARNPIVENQVFFLQSKCIRCGCSVLAGSLEELLQEEKRHRALCRLMRAA
Ga0210394_105610432	3300021420	Soil	MVYEHYDFARNPIVEDHEFSLESECIRCGFSVVARSLEELLEEEKRHRAECTVKRAAS
Ga0210394_106804922	3300021420	Soil	MVYEQYDFTRNPIVEDQEFSLESKCIRCGFSVLAGSLEELLQEEKRHRALCRLLRVT
Ga0210391_1000031214	3300021433	Soil	MVYEQYDFARNPIVENQVFFLKSKCIHCGSSVLARSLEELLGEEESHRGLCRLMRAT
Ga0213879_100826551	3300021439	Bulk Soil	MKLEEFDFARSPIVENQTFFLESKCIHCGSTVLAPSLEELLAQEKGHRAQCVLKRAAS
Ga0210398_108891622	3300021477	Soil	MKLEEYDFTRNPIVENQTFFLESKCVHCGLAVLGSSLEELLKEEDRHRAQCMLKRAA
Ga0210410_1000003624	3300021479	Soil	MVYEQYDFARNPIVEDQEFSLESKCIRCGFSVVAGSLKELLQEEKHHRGLCRLMRVTQ
Ga0210409_114162371	3300021559	Soil	MVNEQYDFVRNPIVSNQVFFLESKCSRCDFSVLARSIEDLLQEEKRHRALCMLM
Ga0242655_100358473	3300022532	Soil	MVYEHYDFTRNPIVEDQVFFLESKCLSCGSSVLASSLGELLEEEKRHREQCGPKRAA
Ga0212123_102205682	3300022557	Iron-Sulfur Acid Spring	MVYEQYDFTRNPIVEDQEFSLESKCIHCSSSVVARSLEELLQEEKRHRALCRLMRAT
Ga0212123_107700752	3300022557	Iron-Sulfur Acid Spring	MVYEQYDFARNPIVENQVFFLQSKCIRCGCSVLAGSLEELLQEEKRHRALCRLMRTA
Ga0242657_10767852	3300022722	Soil	QYDFARNPIVENQVFFLESKCIRCGSSVLAGSLEELLEEEKRHRGQCRLMRAT
Ga0208034_10504951	3300025442	Peatland	MKLEEYDFTRNPIVENQTFFLEFKCVHCGFAVLGSSLEELLKEEDRHRVQCMLKRAAS
Ga0209730_10221281	3300027034	Forest Soil	MVNEQYDFIRNPIVADQVFFLESKCSRCDFSVLARSIEDLLQEEKRHRALCSLIRARS
Ga0209729_10180251	3300027061	Forest Soil	MVNEQYDFIRNPIVADQVFFLESKCSRCDFSVLARSLEELLQQEKCHRALCALMHAK
Ga0208237_10223902	3300027080	Forest Soil	MKLEEFDFARNPIVENQTFFLESKCVHCGFEVVARSLEELLQEEKRHRAQCTPRRAVS
Ga0208241_10142032	3300027297	Forest Soil	MVYEQHDFTRNPIVEDQEFSLESKCIRCGSSVVARSLDELLQEEQRHRAQCRVMLATQ
Ga0209731_10341331	3300027326	Forest Soil	MVNEQYDFIRNPIVADQVFFLESKCSRCDFSVLARSIEELLQEEKRHRALCSLIRARS
Ga0209007_10032636	3300027652	Forest Soil	MVYEHYDFARNPIVENQVFLLESKCIRCGSSVLARSLEELLKEEKSHRALCRLMRAAK
Ga0209060_1000153713	3300027826	Surface Soil	MVYEQYDFIRNPIVENQVFFPESKCVRCGFSVVAGSLEELLEEEKGHRAECTPKRAVS
Ga0209580_106992221	3300027842	Surface Soil	MVYEQYDFARNAVVEDQEFSLESKCIRCGFVVVAHSLEELLEEEKRHRALCTPKRATS
Ga0209274_1000024330	3300027853	Soil	MVYEQYDFTRNPIVEDQEFSLESKCIRCGCSVVAGSLEELLQEETHHRSLCRLTRAA
Ga0209274_100890592	3300027853	Soil	MVYEQYDFTRNPIVEDQEFSLESKCIRCDFSVLARSLEELLQEETRHRALCSLMRAT
Ga0209693_101778131	3300027855	Soil	MVYEQYDFTRNPIVEDQEFSLESKCIRCGSSVLAGSLEELLAEEKRHRGQCRLMRAT
Ga0209167_106012391	3300027867	Surface Soil	PMVFEEYDFTRNPIVEDQEFFLESRCIRCGSSVMARSLEELLQEEKRHRGLCRLKRAT
Ga0209169_100275853	3300027879	Soil	MVYEQHDFARNPIVEDQEFSLESKCSRCGFSVVARSLEELLQEEKRHRALCKLMRAA
Ga0209380_106815372	3300027889	Soil	RSRESLFMVYEHYDFARNPIVADQVFFLESKCTRCGLSVLAQSIEELLQEEERHRALCRLMRAAQ
Ga0209624_1000041531	3300027895	Forest Soil	MVYEQYDFARNPVVENRVFLLESKCIRCGSSVLARSLEELLKEEKRHRALCRLMRAAK
Ga0209624_103473682	3300027895	Forest Soil	MVFEHHDFTRNPIVDDQVFFLESKCIRCGSSALARSLEELLEEENRHRAECRAIRASS
Ga0209006_100015752	3300027908	Forest Soil	MVFEHHDFTRNPIVDDQVFFLESKCIHCGSSALARSLEELLEEENRHRAECRAIRASS
Ga0265740_10143441	3300030940	Soil	MPIMVYEQHDFARNPIVEDQEFSLESKCSRCGFSVVARSLEELLQEEKRHRALCKLMRAT
Ga0310686_1137414241	3300031708	Soil	MVYEQYDFARNPIVENQVFFLESKCIRCGSSALAGSLEELLQEEKRHRALCRLMRAA
Ga0310686_1138717953	3300031708	Soil	MVYEQYDFARNPVVADQEFSLESKCIRCGVSVMARSLEELLQEETRHRALCRLMRAT
Ga0307476_100548502	3300031715	Hardwood Forest Soil	MVYEQYDFARNAVVEDQEFSLESKCIRCGFVVVARSLKELLEEEKRHRALCTPKRATS
Ga0307476_100835442	3300031715	Hardwood Forest Soil	MVYEQYDFTRNPIVEDQEFSLESKCIRCGSSVVARSREELLEEEKRHRLQCRLMRAS
Ga0307476_101007612	3300031715	Hardwood Forest Soil	MVYEQYDFTRNPIVENQAFFLESKCIRCGSSVVAHSLEELLEEEERHRGLCRLMRAT
Ga0307476_101485131	3300031715	Hardwood Forest Soil	MVYEHYDFSRNPIVEDQVFSLESKCIRCGSSVLARSLEELLQEEKRHRAECRLMRATS
Ga0307476_110511492	3300031715	Hardwood Forest Soil	MVYEKYDFTRNPIVEDQEFSLESKCIRCGFSVVVGSLEELLQEEKRHRALCRQMRAK
Ga0307474_100115487	3300031718	Hardwood Forest Soil	MVYEQYDFARNAVVEDQEFSLESKCIRCGFVVVARSLEELLEEEKRHRALCTPKRATS
Ga0307474_100411723	3300031718	Hardwood Forest Soil	MVYEQYDFTRNPIVQDQEFSLESRCIRCGSSVVASSLEELLEEERRHRMQCRLMRAM
Ga0307474_102503531	3300031718	Hardwood Forest Soil	IKGKIEGMAIMVFEQYDFVRNPIVEDQVFFLESKCIRCGSSVLAPSLEELLEEEDRHRAECRVKRAS
Ga0307477_104614692	3300031753	Hardwood Forest Soil	MVYEQYDFTRNPIVEDQKFFLESKCFRCGSSVVARSLEELLQEEKRHRGQCSSKRAAS
Ga0307478_104895382	3300031823	Hardwood Forest Soil	MVYEKYDFTRNPIVEDQEFSLESKCIRCGFSVVAGSLEELLQEEKRHRALCRQMRAK
Ga0307478_105285551	3300031823	Hardwood Forest Soil	MVYEQYDFARNPIVESQEFSLESKCIRCGFSVVAGSLEELLEEEKRHRDSRHRPD
Ga0307479_103118922	3300031962	Hardwood Forest Soil	MVFEQYDFTRNPIVEDQVFFLESKCIRCGSSVLARSLEELLQEEKRHRALCRLMRAT
Ga0307470_100172494	3300032174	Hardwood Forest Soil	MMYEQYDFVRNPIVADQVFFLQSKCSRCDFSVLARSLEELLQQEKCHRALCTLMRAK
Ga0307471_1036561831	3300032180	Hardwood Forest Soil	MVNEQYDFVRNPIVANQVFFLESKCSRCDFSVLARSIEELLQEEKRHRALCSLMRATS
Ga0307471_1037702212	3300032180	Hardwood Forest Soil	MVHEQYDFIRNPIVENQEFSLESKCVGCSFSVVAGSLEELLEQEKGHRAECIPKRAVS
Ga0307472_1004387872	3300032205	Hardwood Forest Soil	MVDEQYDFARNPIVANQVFFLESKCSRCDFSVLARSIEELLQEEKRHRALCRLMRAT
Ga0348332_125969031	3300032515	Plant Litter	LALIQRKIEGMPIMVYEQHDFARNPIVEDQEFSLESKCSRCGSSVVARSLEELLQEEKRHRALCKLMRAT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062008

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences