Metagenome / Metatranscriptome Family F062040

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062040
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	105 residues
Representative Sequence	MASSKRDRALLAEITGVARRLARGQPLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGAHEGGRDEARHLQAAQLCIEAGADLSLIPQWVEEGRRRAGGNPSPLRR
Number of Associated Samples	95
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.58 %
% of genes near scaffold ends (potentially truncated)	25.19 %
% of genes from short scaffolds (< 2000 bps)	85.50 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.893 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (26.718 % of family members)
Environment Ontology (ENVO)	Unclassified (36.641 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (67.176 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.52% β-sheet: 0.00% Coil/Unstructured: 41.48%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF00378	ECH_1	12.98
PF04978	DUF664	11.45
PF01758	SBF	9.92
PF02517	Rce1-like	4.58
PF01656	CbiA	3.05
PF00248	Aldo_ket_red	3.05
PF00582	Usp	3.05
PF00196	GerE	1.53
PF00278	Orn_DAP_Arg_deC	1.53
PF00486	Trans_reg_C	0.76
PF00324	AA_permease	0.76
PF00583	Acetyltransf_1	0.76
PF00753	Lactamase_B	0.76
PF13649	Methyltransf_25	0.76
PF00144	Beta-lactamase	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	4.58
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	4.58
COG0019	Diaminopimelate decarboxylase	Amino acid transport and metabolism [E]	1.53
COG1166	Arginine decarboxylase (spermidine biosynthesis)	Amino acid transport and metabolism [E]	1.53
COG0531	Serine transporter YbeC, amino acid:H+ symporter family	Amino acid transport and metabolism [E]	0.76
COG0833	Amino acid permease	Amino acid transport and metabolism [E]	0.76
COG1113	L-asparagine transporter or related permease	Amino acid transport and metabolism [E]	0.76
COG1115	Na+/alanine symporter	Amino acid transport and metabolism [E]	0.76
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.76
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.76
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.89 %
Unclassified	root	N/A	6.11 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.89 %
Unclassified	root	N/A	6.11 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.89 %
Unclassified	root	N/A	6.11 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	81.68 %
Unclassified	root	N/A	6.11 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.53 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	81.68 %
Unclassified	root	N/A	6.11 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.53 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	72.52 %
Unclassified	root	N/A	6.11 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	1.53 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	58.78 %
Unclassified	root	N/A	6.11 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.53 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	1.53 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.76 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.76 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	58.78 %
Unclassified	root	N/A	6.11 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples	1.53 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.76 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.76 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.76 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	58.78 %
Unclassified	root	N/A	6.11 %
uncultured Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	1.53 %
unclassified Methylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium	0.76 %
Rugosimonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Rugosimonospora	0.76 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.76 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	58.78 %
Unclassified	root	N/A	6.11 %
uncultured Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	1.53 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.76 %
Methylobacterium sp. EUR3 AL-11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. EUR3 AL-11	0.76 %
Rugosimonospora africana	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Rugosimonospora → Rugosimonospora africana	0.76 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559006\|FI_contig25327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	602	Open in IMG/M
2189573001\|GZR05M102I7U94	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300004268\|Ga0066398_10121021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	629	Open in IMG/M
3300004281\|Ga0066397_10008075	All Organisms → cellular organisms → Bacteria	1272	Open in IMG/M
3300004633\|Ga0066395_10439762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	742	Open in IMG/M
3300005093\|Ga0062594_102595229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	558	Open in IMG/M
3300005169\|Ga0066810_10010584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1356	Open in IMG/M
3300005172\|Ga0066683_10152230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1421	Open in IMG/M
3300005172\|Ga0066683_10371655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	886	Open in IMG/M
3300005175\|Ga0066673_10233278	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300005178\|Ga0066688_10147162	All Organisms → cellular organisms → Bacteria	1473	Open in IMG/M
3300005180\|Ga0066685_10629823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	738	Open in IMG/M
3300005181\|Ga0066678_10916812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. EUR3 AL-11	572	Open in IMG/M
3300005332\|Ga0066388_100299406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2253	Open in IMG/M
3300005332\|Ga0066388_103278965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	827	Open in IMG/M
3300005332\|Ga0066388_103431023	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300005332\|Ga0066388_103700098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	780	Open in IMG/M
3300005598\|Ga0066706_10323203	All Organisms → cellular organisms → Bacteria	1219	Open in IMG/M
3300005713\|Ga0066905_100441015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1068	Open in IMG/M
3300005764\|Ga0066903_100635592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1861	Open in IMG/M
3300005983\|Ga0081540_1001522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	19920	Open in IMG/M
3300006059\|Ga0075017_100110905	Not Available	1920	Open in IMG/M
3300006175\|Ga0070712_101242231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	648	Open in IMG/M
3300006755\|Ga0079222_11072408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	703	Open in IMG/M
3300006806\|Ga0079220_10189459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1176	Open in IMG/M
3300006852\|Ga0075433_10121827	All Organisms → cellular organisms → Bacteria	2316	Open in IMG/M
3300009012\|Ga0066710_100424396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1988	Open in IMG/M
3300009137\|Ga0066709_100396415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1913	Open in IMG/M
3300009792\|Ga0126374_10066382	All Organisms → cellular organisms → Bacteria	1910	Open in IMG/M
3300009792\|Ga0126374_10236365	Not Available	1183	Open in IMG/M
3300010043\|Ga0126380_10037391	All Organisms → cellular organisms → Bacteria	2517	Open in IMG/M
3300010043\|Ga0126380_10048402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2280	Open in IMG/M
3300010043\|Ga0126380_10281380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1172	Open in IMG/M
3300010043\|Ga0126380_10329744	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300010046\|Ga0126384_11006008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	759	Open in IMG/M
3300010046\|Ga0126384_11144891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	715	Open in IMG/M
3300010046\|Ga0126384_12053367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	548	Open in IMG/M
3300010047\|Ga0126382_10003854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	6559	Open in IMG/M
3300010048\|Ga0126373_10385546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1422	Open in IMG/M
3300010329\|Ga0134111_10419779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300010337\|Ga0134062_10030791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2112	Open in IMG/M
3300010358\|Ga0126370_12229807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300010358\|Ga0126370_12602146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300010359\|Ga0126376_10110158	All Organisms → cellular organisms → Bacteria	2122	Open in IMG/M
3300010359\|Ga0126376_10152636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1852	Open in IMG/M
3300010359\|Ga0126376_10769643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	936	Open in IMG/M
3300010360\|Ga0126372_10347489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1329	Open in IMG/M
3300010360\|Ga0126372_10421714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1226	Open in IMG/M
3300010362\|Ga0126377_10303276	All Organisms → cellular organisms → Bacteria	1576	Open in IMG/M
3300010362\|Ga0126377_10926731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	935	Open in IMG/M
3300010366\|Ga0126379_12128188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	663	Open in IMG/M
3300010366\|Ga0126379_13821563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300010373\|Ga0134128_12000338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	638	Open in IMG/M
3300010376\|Ga0126381_103655923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	602	Open in IMG/M
3300010376\|Ga0126381_103965080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300010376\|Ga0126381_104646404	Not Available	529	Open in IMG/M
3300010376\|Ga0126381_105018837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300010398\|Ga0126383_11627394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	735	Open in IMG/M
3300010398\|Ga0126383_11924284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	679	Open in IMG/M
3300010398\|Ga0126383_12257462	Not Available	630	Open in IMG/M
3300010398\|Ga0126383_13177958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	536	Open in IMG/M
3300011106\|Ga0151489_1220245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	641	Open in IMG/M
3300011107\|Ga0151490_1093347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M
3300011107\|Ga0151490_1799175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	595	Open in IMG/M
3300012198\|Ga0137364_10380708	Not Available	1055	Open in IMG/M
3300012198\|Ga0137364_10466917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	947	Open in IMG/M
3300012199\|Ga0137383_10027578	All Organisms → cellular organisms → Bacteria	3973	Open in IMG/M
3300012201\|Ga0137365_10064601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2763	Open in IMG/M
3300012201\|Ga0137365_10743541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	716	Open in IMG/M
3300012285\|Ga0137370_10650378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	654	Open in IMG/M
3300012354\|Ga0137366_10582255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	804	Open in IMG/M
3300012356\|Ga0137371_10047953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3301	Open in IMG/M
3300012356\|Ga0137371_10876972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	682	Open in IMG/M
3300012930\|Ga0137407_10136783	All Organisms → cellular organisms → Bacteria	2148	Open in IMG/M
3300012944\|Ga0137410_11908618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300012948\|Ga0126375_10488813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	914	Open in IMG/M
3300012948\|Ga0126375_10696242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	790	Open in IMG/M
3300012971\|Ga0126369_11813980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	699	Open in IMG/M
3300012987\|Ga0164307_10826401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	739	Open in IMG/M
3300016404\|Ga0182037_11694787	Not Available	563	Open in IMG/M
3300017947\|Ga0187785_10024024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2177	Open in IMG/M
3300017947\|Ga0187785_10175946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	916	Open in IMG/M
3300017959\|Ga0187779_11338300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Rugosimonospora → Rugosimonospora africana	508	Open in IMG/M
3300017973\|Ga0187780_10319873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1093	Open in IMG/M
3300017974\|Ga0187777_10668250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	735	Open in IMG/M
3300018060\|Ga0187765_11271059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300018064\|Ga0187773_10249817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	968	Open in IMG/M
3300018064\|Ga0187773_10438416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	765	Open in IMG/M
3300018089\|Ga0187774_10336572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	893	Open in IMG/M
3300018433\|Ga0066667_10133995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1718	Open in IMG/M
3300018482\|Ga0066669_11213694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	681	Open in IMG/M
3300020581\|Ga0210399_11397840	Not Available	547	Open in IMG/M
3300021560\|Ga0126371_10410794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1496	Open in IMG/M
3300021560\|Ga0126371_11395503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	831	Open in IMG/M
3300026300\|Ga0209027_1147894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	802	Open in IMG/M
3300026310\|Ga0209239_1322249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300026341\|Ga0257151_1018303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	734	Open in IMG/M
3300026494\|Ga0257159_1074335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	587	Open in IMG/M
3300027909\|Ga0209382_10279906	All Organisms → cellular organisms → Bacteria	1886	Open in IMG/M
3300028782\|Ga0307306_10084603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	830	Open in IMG/M
3300028792\|Ga0307504_10010978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2048	Open in IMG/M
3300028793\|Ga0307299_10225292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	705	Open in IMG/M
3300028811\|Ga0307292_10377176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	601	Open in IMG/M
3300031543\|Ga0318516_10013890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3961	Open in IMG/M
3300031543\|Ga0318516_10318145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	899	Open in IMG/M
3300031544\|Ga0318534_10226953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1078	Open in IMG/M
3300031544\|Ga0318534_10409547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	778	Open in IMG/M
3300031546\|Ga0318538_10511193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	651	Open in IMG/M
3300031640\|Ga0318555_10386562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	758	Open in IMG/M
3300031681\|Ga0318572_10691132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	607	Open in IMG/M
3300031681\|Ga0318572_10836939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300031681\|Ga0318572_10864284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300031713\|Ga0318496_10060958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1972	Open in IMG/M
3300031782\|Ga0318552_10157357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1143	Open in IMG/M
3300031795\|Ga0318557_10096362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1305	Open in IMG/M
3300031981\|Ga0318531_10402856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	619	Open in IMG/M
3300032001\|Ga0306922_10368698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1540	Open in IMG/M
3300032008\|Ga0318562_10111349	Not Available	1560	Open in IMG/M
3300032055\|Ga0318575_10100723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1401	Open in IMG/M
3300032089\|Ga0318525_10106226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1433	Open in IMG/M
3300032205\|Ga0307472_100897340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	820	Open in IMG/M
3300032782\|Ga0335082_10592300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	970	Open in IMG/M
3300032783\|Ga0335079_10001332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	28134	Open in IMG/M
3300032783\|Ga0335079_11971513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	563	Open in IMG/M
3300032805\|Ga0335078_10811036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1139	Open in IMG/M
3300032955\|Ga0335076_10011949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8742	Open in IMG/M
3300033158\|Ga0335077_10179714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2398	Open in IMG/M
3300033158\|Ga0335077_10205966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	2208	Open in IMG/M
3300033289\|Ga0310914_11430149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	594	Open in IMG/M
3300033290\|Ga0318519_10358335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	863	Open in IMG/M
3300033805\|Ga0314864_0148836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	595	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.71%
Host-Associated	Host-Associated	2.29%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.95%
Plants	Host-Associated → Plants	2.29%
Aquatic	Environmental → Aquatic	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.53%
Sediment	Environmental → Aquatic → Sediment	0.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.57%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.98%
Loam	Environmental → Terrestrial → Soil → Loam	8.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.53%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.76%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.04%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.32%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.98%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.87%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.53%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.76%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	26.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.03%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.40%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.58%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.05%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.53%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.53%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.76%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.76%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.76%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559006	Grass soil microbial communities from Rothamsted Park, UK - FI (heavy metals 2g/kg) assembled	Environmental	Open in IMG/M
2189573001	Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026341	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-A	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033805	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FI_00369080	2166559006	Grass Soil	MASSKRDRALLAEITGVARRLARGQLSEAEQQEAAATLSQVAQGRADLLAESAGLAIGSHEGGRDEARHLQAAQLCIEAGADLSLIPHWVEEGRRRAGNSPSPLHR
FD2_04280630	2189573001	Grass Soil	MASSKRDKALLAEITGVARRLARGRQLSEAEQQEAAATLSQVARGRADLLAESAGLAIGTHEGGRDEARHLQAAQLCIDAGADLSLIPHWVEEGRRRAGNSPSPLHR
Ga0066398_101210211	3300004268	Tropical Forest Soil	MASSKRDRALLAEITGVARRLARGRPLTGAEQQEAAATLGQVARSRADLLAESAGLAIGGHEGDRDEAHYLRAAQLCIDAGADLGSLPQWIEEGRRRAAAASSPIRT*
Ga0066397_100080752	3300004281	Tropical Forest Soil	MASSKRDRALLAEITGVARRLARGRPLTGAEQQEAAATLGQVARSRADLLAESAGLAIGGHEGDRDEAHYLRAAQLCINAGADLGSLPQWIEEGRRRAAAASSPIRT*
Ga0066395_104397621	3300004633	Tropical Forest Soil	MASSKRDKALLAEITGVARRLARGRLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGSQEGGRDEARHLQAAQLCIDAGADLSLIPQWVEEGRRRAGAAPSALRR*
Ga0062594_1025952291	3300005093	Soil	MASSKRDRALLAEITGVARRLAGGRPVTGAEQQEAAATLSQVARGRADLLAESAGLAIGAHEGDRDEARYLRAAQLCIDAGADLGALPQWIEEGRRRAAASSPIRT*
Ga0066810_100105842	3300005169	Soil	MTSSKRDQALLAQITGVARRLARARPLTGAEQQEAAATLSQLAKGRADLLAESAGLAIGTHEGDPDEARYLQAAQLCIDAGADIGSLPRWIEEGRRRSGAASPTPRTGAASAGH*
Ga0066683_101522302	3300005172	Soil	MASSKRDKALLAEITGVARRLARGRSLPGAEQQEAAATLSQVAQGRADLLAESAGLAIGSHEGGRDEARHLQAAQLCIEAGADLSLIPHWVEEGRRRAGNSPSPLHR*
Ga0066683_103716551	3300005172	Soil	MASPKRDRALLAEITGVARRLAGGRPVTGAEQQEAAATLSQVARGRADLLAESAGLAIGAHEGDRDEARYLRAAQLCIDARADLGPLPRWIEEGRRRAAASSPIRT*
Ga0066673_102332782	3300005175	Soil	MASSKRDKALLAEITGVARRLARGQLSGAEQQEAAATLSQVARGRADLLAESAGLAIGAHEGGRDEARYLQAAQLCIDAGADLSLIPQWVEEGRRRAGATPSPLRG*
Ga0066688_101471623	3300005178	Soil	MASPKRDRALLAEITGVARRLAGGRPVTGAEQQEAAATLSQVARGRADLLAESAGLAIGTHEGDRDEARYLRAAQLCIDAGADLGALPQWIEEGRRRAASSSPIRT*
Ga0066685_106298231	3300005180	Soil	MVSMASSKRDRALLAEITGVARRLAGGRPVTGAEQQEAAATLSQVARGRADLLAESAGLAIGAHEGDRDEARYLRAAQLCIDAGADLGALPQW
Ga0066678_109168121	3300005181	Soil	MASSKRDKALLAEITGVARRLARGRSLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGSHEGGRDEARHLQAAQLCIEAGADLSLIPHWVEEGRRRAGNSPSPLHR*
Ga0066388_1002994063	3300005332	Tropical Forest Soil	MASSKRDRALLAEITGVARRLARGQPLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGAHEGGRDEARHLQAAQLCIEAGADLSLIPQWVEEGRRRAGGNPSPLRR*
Ga0066388_1032789653	3300005332	Tropical Forest Soil	MASSKRDRTLLAEITGVARRLARGRSLTDAEQREAAATLSQVAKGRADLLAECAGLAIGAHEGGPDEARYLQAAQLCIDAGADSGLIQQWIDEGRRRAGASSPALRAGL*
Ga0066388_1034310232	3300005332	Tropical Forest Soil	MASSKRDKTLLAEITGVARRLARGQLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGTHEGGRDEARHLQAAQLCIDAGADLSLIPQWVEEGRRRAGGSPSPLRR*
Ga0066388_1037000981	3300005332	Tropical Forest Soil	MASSKRDKALLAEITGVAHRLARGRSLSAAEQQEAAATLSQVAQGRADLLAESAGLAIGGHEGGRDEARHLQAAQLCIEAGADVSLIPQWVEEGRRRAGNSPAALHL*
Ga0066706_103232033	3300005598	Soil	MASPKRDRALLAEITGVARRLAGGRPVTGAEQQEAAATLSQVARGRADLLAESAGLAIGAHEGDRDEARYLRVAQLCIDAGADLGALPQWIEEGRRRAASSSPIRT*
Ga0066905_1004410152	3300005713	Tropical Forest Soil	MASTKRDKALLAEITGVARRLARGRSMSEAEQQEAAATLSQVAQGRADLLAESAGLAIGGHEGGRDEARHLQAAQLCIDAGADLGLIPQWVEEGRRRAGATPS
Ga0066903_1006355925	3300005764	Tropical Forest Soil	MASSKRDRTLLAEITGVARRLARGRPLTGAEQREAAATLSQVAKGRADLLAECTGLAIGAHEGGPDEARYLQAAQLCIDAGADSSLI
Ga0081540_100152213	3300005983	Tabebuia Heterophylla Rhizosphere	MASSKRDRALLAEITGVARRLARGRPLTGAEQQEAAATLGQVARGRADLLAESAGLAIGGHEGDRDEARYLQAAQLCIDAGADLGSLPHWIEEGRRRAAAASSPIRT*
Ga0075017_1001109054	3300006059	Watersheds	MVTSKRDRTLLAEITGVARRLARGQPLTGAEQQEAAAALSQVAQGRADLLAESAGLAIGAHEGYPDEARYLQAAQLCIDAGADLASIPDWIEEGRRRAGAA*
Ga0070712_1012422311	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MASSKRDKALLAEITGVARRLARGQLSGAEQQEAAATLSQVARGRTDLLAESAGLAIGTHEGGPDEARHLQAAQLCIEAGADLGLIPQWVEEGRRRAANSPSALYR*
Ga0079222_110724082	3300006755	Agricultural Soil	MASSKRDKALLAEITGVARRLARGQQLSGAEQQEAAATLSQVARGRADLLAESAGLAIGTHEGGPDEARHLQAAQLCIEAGADVALIPQWVEEGRRRAGNSPSPLHR*
Ga0079220_101894592	3300006806	Agricultural Soil	MASSKRDKALLAEITGVARRLARGQQMSGAEQQEAAAALSQVARGRADLLAESAGLAIGTHEGGPDEARHLQAAQLCIEAGADLALIPQWVEEGRRRAANSPSALYR*
Ga0075433_101218273	3300006852	Populus Rhizosphere	MVSMASSKRDRALLAEITGVARRLAGGRPVTGAEQQEAAATLSQVARGRADLLAESAGLAIGAHEGDRDEARYLRAAQLCIDAGADLGALPQWIEEGRRRAAASSPIRT*
Ga0066710_1004243961	3300009012	Grasslands Soil	MASPKRDRALLAEITGVARRLAGGRPVTGAEQQEAAATLSQVARGRADLLAESAGLAIGAHEGDRDEARYLRAAQLCIDAGADLGALPQWIEEGRRRAAASSPIRT
Ga0066709_1003964153	3300009137	Grasslands Soil	MASSKRDKALLAEITGVARRLARGRSLPGAEQQEAAATLSQVAQGRADLLAESAGLAIGSHEGGRDEARHLQAAQLCIEAGADLSLIPHWVEEGRRRAANSPSPLYR*
Ga0126374_100663822	3300009792	Tropical Forest Soil	MAPSKRDRALLAEINGVARRLARGRPLTGAEQQEAAATLGQVARGRADLLAESAGLAIGGHEGDRDEARYLQAAQLCIDAGADLGSLPHWIEEGRRRAAAASSPIRT*
Ga0126374_102363651	3300009792	Tropical Forest Soil	MASSKRDKALLAEITGVARRLARGRSLSGAEQQEAAATLSQVAQGRADLLAEAAGLAIGSHEGGRDEARHLQAAQLCIDAGADLSLIPQWAGEGRRRAGGSPAPLRR*
Ga0126380_100373913	3300010043	Tropical Forest Soil	MASSKRDRALLAEITGVARRLARGRPLTGAEQQEAAATLGQVARSRADLLAESAGLAIGGHEGDRDEAPYLRAAQLCIDAGADLGSLPHWIEEGRRRAAAASSPIRT*
Ga0126380_100484021	3300010043	Tropical Forest Soil	MASSKRDRALLAEITGVARRLARGRPVTGAEQQEAAATLGQVARGRADLLAESAGLAIGGHEGDPDEARYLQAAQLCIDAGADLGSLPHWI
Ga0126380_102813803	3300010043	Tropical Forest Soil	MASTKRDKALLAEITGVARRLARGRSMSGAERQEAAATLSQVAQGRADLLAESAGLAVGGHEGGRDEARHLQAAQLCIDAGADLSLIPQWVEEGRRRAGGTPSPLRR*
Ga0126380_103297442	3300010043	Tropical Forest Soil	MAPSKRDRALLAEINGVARRLARGRPLTGAEQQEAAATLGQVARGRADLLAESAGLAIGGHEGDPDEARYLQAAQLCIDAGADLGSLPHWIEEGRRRAAAASSPIRT*
Ga0126384_110060082	3300010046	Tropical Forest Soil	FMASSKRDRALLAEITGVARRLARGRPLTGAEQQEAAATLGQVAKSRADLLAESAGLAIGGHEGDRDEAHYLRAAQLCINAGADLGSLPQWIEEGRRRAAAASSPIRT*
Ga0126384_111448911	3300010046	Tropical Forest Soil	YGSMASSKRDRALLAEITGVARRLARGRPLTGAEQQEAAATLGQVARGRADLLAESAGLAIGGHEGDRDEARYLQAAQLCIDAGADLGSLPHWIEEGRRRAAAASSPIRT*
Ga0126384_120533671	3300010046	Tropical Forest Soil	MASSKRDRTLLAEITGVARRLARGRPLTDAEQREAAATLSQVAKGRADLLAECAGLAIGAHEGGPDEARYLQAAQLCIDAGADSSLIPQWIEEGRRRAGASSPALRAGL*
Ga0126382_100038546	3300010047	Tropical Forest Soil	MASSKRDRALLAEITGVARRLARGRPLTGAEQQEAAATLGQVARSRADLLAESAGLAIGGHEGDRDEAHYLRAAQLCINAGADLGSLPHWIEEGRRRAAAASSPIRT*
Ga0126373_103855462	3300010048	Tropical Forest Soil	MAMSKRDRALLAEITGVARRLARGQRLTGAEQQEAAAALSLVAQGRADLLAESAGLAIGAHEGNPDEARYLQAAQLCIDAGADLTAIPDWIEEGRRRAGAA*
Ga0134111_104197791	3300010329	Grasslands Soil	MALSKRDRTLLAEITGVARRLARGRSLSEAEQQEAAATLSQVAQGRADLLAESAGLAIGSHEGGRDEARHLQAAQLCIDAGADSSLIPQWIEAGRRRAGASSQILRTGM*
Ga0134062_100307911	3300010337	Grasslands Soil	MASSKRDKALLAEITGVARRLARGRQLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGSHEGGRDEARHLQAAQLCIEAGADLSLIPHWVEEGRRRAGNSPSPLHR*
Ga0126370_122298071	3300010358	Tropical Forest Soil	MASSKRDKALLAEITGVARRLARGQLSGAEQQEAAAALSQVAQGRADLLAESAGLAIGTHEGGRDEARHLQAAQLCIDAGADLSLIPQWVEEGRRRAGGSPSPLRR*
Ga0126370_126021461	3300010358	Tropical Forest Soil	MASSKRDKALLAEITGVARRLARGRSLSGAEQQEAAATLSQVAQGRADLLAEAAGLAIGSHEGGRDEARHLQAAQLCIDAGADLSLIPQWPGEGRRRAGGSPAPLRR*
Ga0126376_101101583	3300010359	Tropical Forest Soil	MASSKRDRALLAEINGVARRLARGRPLTGAEQQEAAATLGQVARGRADLLAESAGLAIGGHEGDRDEARYLQAAQLCIDAGADLGSLPHWIEEGRRRAAAASSPIRT*
Ga0126376_101526362	3300010359	Tropical Forest Soil	MASTKRDKALLAEITGVARRLARGRSMSGAERQEAAATLSQVAQGRADLLAESAGLAVGGHEGGRDEARHLQAAQLCIDAGADLGLIPQWVEEGRRRAGATPSPLRG*
Ga0126376_107696431	3300010359	Tropical Forest Soil	MASSKRDKALLAEITGVARRLARGQLSGAEQQEAAAALSQVAQGRADLLAESAGLAIGTHEGGRDEARHLQAAQLCIDAGADLSLIPQWVEEGRRRAGGNPSPLRR*
Ga0126372_103474892	3300010360	Tropical Forest Soil	MASSKRDRTLLAEITGVARRLARGRPLTDAEQREAAATLSQVAKGRADLLAECTGLAIGAHEGGPDEARYLQAAQLCIDAGADSSLIPQWIEEGRRRAGASSPALRAGL*
Ga0126372_104217142	3300010360	Tropical Forest Soil	MASSKRDKTLLAEITGVARRLARGQLSGAEQQEAAAALSQVAQGRADLLAESAGLAIGTHEGGRDEARHLQAAQLCIDAGADLGLIPQWVEEGRRRAGGSPSPLRR*
Ga0126377_103032763	3300010362	Tropical Forest Soil	MASSKRDRALLAEITGVARRLARGRPVTGAEQQEAAATLGQVARGRADLLAESAGLAIGGHEGDRDEAHYLRAAQLCIDAGADLGSLPHWIEEGRRRAAAASSPIRT*
Ga0126377_109267311	3300010362	Tropical Forest Soil	MASSKRDKALLAEITGVARRLARGQLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGAHEGGRDEARYLQAAQLCIEAGADLSLIPQWVEEGRRRTAGRPSPLRR*
Ga0126379_121281882	3300010366	Tropical Forest Soil	MVSKRDRTLLAEITGVARRLARGRPLTDAEQREAAATLGQVAKGRADLLAESAGLAIGAHEGSPDEARYLQAAQLCIDAGADSSLIPQWIEEGRRRAGASSPALQAGL*
Ga0126379_138215631	3300010366	Tropical Forest Soil	SKRDKALLAEITGVARRLARGRSLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGGHEGGRDEARHLQAAQLCIEAGADVSLIPQWVEEGRRRAGNSPAALHL*
Ga0134128_120003382	3300010373	Terrestrial Soil	MVSMASSKRDRALLAEITGVARRLAGGRPVTGAEQQEAAATLSQVARGRADLLAESAGLAIGAHEGDRDEARYLRAAQRCIDAGADLGALPQWIEEGRRRAAASSPIRT*
Ga0126381_1036559232	3300010376	Tropical Forest Soil	MASSKRDKALLAEITGVARRLARGHLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGANEGVRDEARHLQAAQLCIDAGADLSLIPQWVEEGRRRAGASPSPLRL*
Ga0126381_1039650801	3300010376	Tropical Forest Soil	MASSKRDKALLAEITGVARRLARGQLSVAEQQEAAATLSQVAQGRADLLAESAGLAIGSHEGGRDEARHLQAAQLCIDAGADVNLIPQWVEEGRRRAGAAPSALLR*
Ga0126381_1046464042	3300010376	Tropical Forest Soil	MATSKRDRALLAEITGVARRLARGQRLTDAEQQEAAAALSQVAQGRADLLAESAGLAIGVHEGNPDEARYLQAAQLCIDAGADLTAIPDWIEEG
Ga0126381_1050188371	3300010376	Tropical Forest Soil	MASSKRDKALLAEITGVARRLAHGRLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGSQEGGRDEARHLRAAQLCVDAGADLSLIPQWVEEGRRRAGAAPSALRR*
Ga0126383_116273942	3300010398	Tropical Forest Soil	MASSKRDRTLLAEITGVARRLARGRPLTDAEQREAAATLSQVAKGRADLLAECAGLAIGAHEGGPDEARYLQAAQLCIDAGADSGLIQQWIDEGRRRAGASSPALRAGL*
Ga0126383_119242841	3300010398	Tropical Forest Soil	MATSKRDRALLAEITGVARRLARGQQLTGAEQQEAAAALSQVAQGRADLLAESAGLAIGAHEGNPDEARYLQAAQLCIDAGADLTAIPDWIEEGRRRAGAA*
Ga0126383_122574621	3300010398	Tropical Forest Soil	MASSKRDKALLAEITGVARRLARGRSLSGAEQQEAAATLSQVAQGRADLLAEAAGLAIGSHEGGRDEARHLQAAQLCIDAGADLSLIPQWAGEGRHRAGGSPAPLRR*
Ga0126383_131779581	3300010398	Tropical Forest Soil	MASSKRDKALLAEINGVARRLARGQLSGAEQQEAAAALSQVAQGRADLLAESAGLAIGTSEGGRDEARHLQAAQLCIDAGADLSLIPQWV
Ga0151489_12202451	3300011106	Soil	MASSKRDKALLAEITGVARRLARGQQLSEAEQQEAAATLSQVARGRADLLAESAGLAIGTHEGGPDEARHLQAAQLCTEAGADLSLIPHWVEEGRRRAASSPSP
Ga0151490_10933471	3300011107	Soil	MASSKRDKALLAEITGVARRLARGQLSRAEQQEAAATLSQVAQGRADLLAESAGLAIGTHEGGRDEARHLQAAQLCIDAGADLSLIPQWVEEGRRRADGSPSPLRR*
Ga0151490_17991752	3300011107	Soil	LTSSKRDQALLAQITGVARRLARAQPLTGAEQQEAAATLSQLAKGRADLLAESAGLAIGTHEGDPDEARYLQAAQLCIDAGADIGSLPRWIEEGRRRSGAASPTPRTGAASAGH*
Ga0137364_103807082	3300012198	Vadose Zone Soil	MASSKRDRALLAEITGVARRLAGGRPVTGAEQQEAAATLSQVARGRADLLAESAGLAIGAHEGDRDEARYLRAAQLCIDAGADLGALPQWIEEGRRRAASSSPIRT*
Ga0137364_104669172	3300012198	Vadose Zone Soil	MASSKRDKALLAEITGVARRLAHGRSLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGSHEGGRDEARHLQAAQLCIEAGADLSLIPHWVEEGRRRAGNSPSPLHR*
Ga0137383_100275783	3300012199	Vadose Zone Soil	MASSKRDKALLAEITGVARRLARGRSLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGSHEGGRDEARHLQAAQLCIEAGADLSLIPHWVEEGRRRAGNSPTPLHR*
Ga0137365_100646013	3300012201	Vadose Zone Soil	MASSKRDRALLAEITGVARRLAGGRPVTGAEQQEAAATLSQVAKGRADLLAESAGLAIGAHEGDRDEARYLRAAQLCIDAGADLGALPQWIEEGRRRAAGSSPIRT*
Ga0137365_107435411	3300012201	Vadose Zone Soil	LIFIEYIFYYGSMASSKRDRALLAEITGVARRLARGRPLTGAERQEAAATLSQVARGRADLLAESAGLGIGAHEGDRDEARYLQAAQLCIDAGADLGSLPQWIEEGRRRAAASSPIRT*
Ga0137370_106503782	3300012285	Vadose Zone Soil	MASSKRDRALLAEITGVARRLAGGRPVTGAEQQEAAATLSQIARGRADLLAESAGLAIGAHEGDRDEARYLRAAQLCIDAGADLGALPHWIEEGRRRAADSAPIRT*
Ga0137366_105822552	3300012354	Vadose Zone Soil	MASSKRDKALLAEITGVARRLARGQQLSEAEQQEAAATLSQVAQGRADLLGESAGLAIGSHEGGRDEARHLQAAQLCIEAGADLSLIPHWVEEGRRRAGNSPTPLHR*
Ga0137371_100479531	3300012356	Vadose Zone Soil	GSMASSKRDRALLAEITGVARRLAGGRPVTGAEQQEAAATLSQVARGRADLLAESAGLAIGAHEGDRDEARYLRAAQLCIDAGADLGALPQWIEEGRRRAAGSSPIRT*
Ga0137371_108769722	3300012356	Vadose Zone Soil	MASSKRDRTLLAEITGVARRLARGRPLTDAEQREAAATLSQVAKGRADLLAECAGLAIGVHEGGPDEARYLQAAQLCIDAGADSSLIPQWIEEGRRRAGASSPA
Ga0137407_101367831	3300012930	Vadose Zone Soil	MASSKRDKALLAEITGVARRLARGRSLPGAEQQEAAATLSQVAQGRADLLAESAGLAIGSHEGGRDEARHLQAAQLCIEAGADLSLIPQWVEEGRRRAGNSPS
Ga0137410_119086181	3300012944	Vadose Zone Soil	MVTSKRDKALLAEITGVARRLARGRSLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGSHEGGRDEARHLQAAQLCIEAGADLSLIPQWVEEGRRRAGNSPSPLHR*
Ga0126375_104888132	3300012948	Tropical Forest Soil	MASTKRDKALLAEITGVARRLARGRSLSGAEQQEAAATLSQVAQGRADLLAEAAGLAIGSHEGGRDEARHLQAAQLCIDAGADLSLIPQWAGEGRRRAGGSPAPLRR*
Ga0126375_106962421	3300012948	Tropical Forest Soil	RFMASSKRDRALLAEITGVARRLARGRPVTGAEQQEAAATLGQVARGRADLLAESAGLAIGGHEGDRDEAHYLRAAQLCIDAGADLGSLPQWIEEGRRRAAAASSPIRT*
Ga0126369_118139802	3300012971	Tropical Forest Soil	MASSKRDKALLAEITGVARRLARGHLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGANEGGRDEARHLQAAQLCIDAGADLSLIPQWVEEGRRRAGNSPSPLRL*
Ga0164307_108264011	3300012987	Soil	MVSSKRDKALLAEITGVARRLARGQQLSEAEQQEAAATLSQVARGRADLLAESAGLAIGTHEGGPDEARHLQAAQLCIEAGADLSLIPHWVEEGRRRAASSPSP
Ga0182037_116947872	3300016404	Soil	MATSKRDRALLADITGVARRLARGHKLTGAEQQEAAAALSHVAQGRADLLAESAGLAIGAHEGNPDEARYLQAAQLCIDAGADLAAI
Ga0187785_100240242	3300017947	Tropical Peatland	MASSKRDKTLLAEITGVARRLARGQLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGTHEGGRDEARHLQAAQLCIDAGADLSLIPQWVEEGRRRAGGSPSPLRR
Ga0187785_101759461	3300017947	Tropical Peatland	MASSKRDRALLAEITGVARRLARGQTLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGAHEGGRDEARHLQAAQLCIEAGADLSLIPQWVEEGRRRAGGRPSPLRR
Ga0187779_113383002	3300017959	Tropical Peatland	MTSPKRDQALLAEITGVARRLARGRPLTDAGRQEAAATLSEVAKGRADLLAECARLVLGAHEGSPDEARRLQAAQLCIDAGADLSLIPEWTGGDHRPASSRRAKPPAVASRG
Ga0187780_103198732	3300017973	Tropical Peatland	MATSKRDRTLLAEITGVARRLARGQPLTDAEQQEAAATLSQVALGRADLLAESAGLAIGAHEGNPDEARYLQAAQLCIDAGADLAAIPDWIEEGRRRAGAA
Ga0187777_106682502	3300017974	Tropical Peatland	MATSKRDRALLAEITGVARRLTRARPLTGDEQQEAAAALSQVARGRADLLAESAGLAIGAHEGGADEARYLQAAQLCIDAGADLSLIPDWIEEGRRRAGTTV
Ga0187765_112710591	3300018060	Tropical Peatland	MASSKRDKALLAEISGVARRLARGQLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGSHEGGRDEARHLQAAQLCIDAGADVSLIPEWVEEGRRRAGNNPSPLRR
Ga0187773_102498171	3300018064	Tropical Peatland	MASSKRDKTLLAEITGVARRLARGQLSVAEQQEAAATLSQVAQGRADLLAESAGLAIGTHEGGRDEARHLQAAQLCIDAGADLSLIPHWVEEGRRRAGGSPSPLRR
Ga0187773_104384161	3300018064	Tropical Peatland	MASSKRDRALLAEITGVARRLARGRSLSEAEQQEAAATLSQVAQGRADLLAESAGLAIGGHEGGRDEARHLQAAQLCIEAGADVSLIPQWVEEGRRRAGSSPAPLRL
Ga0187774_103365721	3300018089	Tropical Peatland	MASSKRDKTLLAEITGVARRLARGQLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGTHEGGRDEARHLQAAQLCIDAGADLSLIPHWVEEGRRRAGGSPSPLRR
Ga0066667_101339952	3300018433	Grasslands Soil	MASSKRDRALLAEITGVARRLAGGRPVTGAEQQEAAATLSQVARGRADLLAESAGLAIGAHEGDRDEARYLRAAQLCIDAGADLGALPQWIEEGRRRAASSSPIRT
Ga0066669_112136941	3300018482	Grasslands Soil	MASPKRDRALLAEITGVARRLAGGRPVTGAEQQEAAATLSQVARGRADLLAESAGLAIGAHEGDRDEARYLRAAQLCIDAGADSSLIPQWIEAGRRRAGASSQILRTGM
Ga0210399_113978401	3300020581	Soil	MASSKRDKALLAEITGVARRLARGQQLSEAEQHEAAATLSQVARGRADLLAESAGLAIGTHEGGPDEARHLQAAQLCIEAGADLSLIPNWVEEG
Ga0126371_104107943	3300021560	Tropical Forest Soil	MASSKRDKALLAEITGVARRLARGRSLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGGHEGGRDEARHLQAAQLCIEAGADVSLIPQWVEEGRRRAGNSPAALHL
Ga0126371_113955032	3300021560	Tropical Forest Soil	MASSKRDKALLAEITGVARRLARGHLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGANEGGRDEARHLQAAQLCIDAGADLSLIPQWVEEGRRRAGDSASPLRL
Ga0209027_11478942	3300026300	Grasslands Soil	MASPKRDRALLAEITGVARRLAGGRPVAGAEQQEAAATLSQVARGRADLLAESAGLAIGAHEGDRDEARYLRVAQLCIDAGADLGALPQWIEEGRRRAASSSPIRT
Ga0209239_13222492	3300026310	Grasslands Soil	MASSKRDKALLAEITGVARRLARGRSLPGAEQQEAAATLSQVAQGRADLLAESAGLAIGSHEGGRDEARHLQAAQLCIEAGADLSLIPHWVEEGRRRAGNSPS
Ga0257151_10183032	3300026341	Soil	KRDKALLAEISGVARRLAHSRSLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGSHEGGRDEARHLQAAQLCIEAGADLSLIPQWVEEGRRRAGNSPSPLHR
Ga0257159_10743352	3300026494	Soil	MASSKRDKALLAEISGVARRLAHSRSLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGSHEGGRDEARHLQAAQLCIEAGADLSLIPQWVEEGRRRAGNSPSPLHR
Ga0209382_102799062	3300027909	Populus Rhizosphere	MASSKRDRALLAEITGVARRLAGGRPVTGAEQQEAAATLSQVARGRADLLAESAGLAIGAHEGDRDEARYLRAAQLCIDAGADLGALPQWIEEGRRRAAASSPIRT
Ga0307306_100846031	3300028782	Soil	MASSKRDRALLAEITGVARRLAGGRPVTGTEQQEAAATLSQVARGRADLLAESAGLAIGAHEGDRDEARYLRAAQLCIDAGADLGALPLWIEEGRRRAAASSPIRT
Ga0307504_100109782	3300028792	Soil	MASSKRDKALLAEITGVARRLARGRSLSEAEQQEAAATLSQVARGRADLLAESAGLAIGSHEGGRDEARHLQAAQLCIEAGADLSLIPHWVEEGRRRAASSPSPLYR
Ga0307299_102252921	3300028793	Soil	MASSKRDRALLAEITGVARRLAGGRPVTGTEQQEAAATLSQVARGRADLLAESAGLAIGAHEGDRDEARYLRAAQLCIDAGADLGALPQWIEEGRRRAAAWSPIRT
Ga0307292_103771761	3300028811	Soil	MASSKRDRALLAEITGVARRLAGGRPVTGTEQQEAAATLSQVARGRADLLAESAGLAIGAHEGDRDEARYLRAAQLCIDAGADLGALPLWIEEGRRRA
Ga0318516_100138902	3300031543	Soil	MATSKRDRALLAEITGVARRLARGHTLTGAEQVAQGRADLLAESAGLAIGAHEGNPDEARYLQAAQLCIDAGADLAAIPDWIEEGRRRAGAA
Ga0318516_103181451	3300031543	Soil	MASSKRDKALLAEITGVARRLARGHLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGANEGGRDETRHLQAAQLCIDAGADLSLIPQWVEEGRRRAGTSPSALRL
Ga0318534_102269531	3300031544	Soil	MATSKRDRALLADITGVARRLARGHKLTGAEQQEAAAALSHVAQGRADLLAESAGLAIGAHEGNPDEARYLQAAQLCIDAGADLAAIPDWIEEGRRRAGAA
Ga0318534_104095472	3300031544	Soil	MARRLARGHLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGAHEGGRDEARHLRAAQLCIEAGADLSLIPQWVEEGRRRAGNSSSPLRL
Ga0318538_105111931	3300031546	Soil	YGSMATSKRDRALLADITGVARRLARGHKLTGAEQQEAAAALSHVAQGRADLLAESAGLAIGAHEGNPDEARYLQAAQLCIDAGADLAAIPDWIEEGRRRAGAA
Ga0318555_103865622	3300031640	Soil	MASSRRDKALLAEITGVARRLARGHLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGAHEGGRDEARHLRAAHLCIEAGADLSLIPQWVEEGRRRAGNSSSPLRL
Ga0318572_106911321	3300031681	Soil	MASSKRDKALLAEITGVARRLARGQQLSGAEQQEAAATLSQVARGRADLLAESAGLAIGTHEGGPDEARHLQAAQLCIEAGAELALIPQWVEEGRRRAGNSPS
Ga0318572_108369391	3300031681	Soil	AEITGVARRLARGHLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGANEGSRDEARHLKAAQLCIDAGADLSLVPQWVEEGRRRAGNSPSPLRL
Ga0318572_108642841	3300031681	Soil	RDKALLAEITGVARRLARGHLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGANEGGRDETRHLQAAQLCIDAGADLSLIPQWVEEGRRRAGTSPSALRL
Ga0318496_100609581	3300031713	Soil	MASSRRDKALLAEITGVARRLARGHLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGAHEGGRDEARHLRAAQLCIEAGADLSLIPQWVEEGRRRAGNSSSPLRL
Ga0318552_101573573	3300031782	Soil	MASSKRDKALLAEITGVARRLARGHLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGAHEGGRDEARHLRAAQLCIEAGADLSLIPQWVEEGRRLDAE
Ga0318557_100963621	3300031795	Soil	MASSRRDKALLAEITGVARRLARGHLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGANEGGRDETRHLQAAQLCIDAGADLSLIPQWVEEGRRRAGTSPSALRL
Ga0318531_104028562	3300031981	Soil	MASSKRDKALLAEITGVARRLARGHLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGANEGGRDETRHLQAAQLCIDAGADLSLI
Ga0306922_103686983	3300032001	Soil	MASSKRDKALLAEITGVARRLARGHLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGANEGGRDETRHLQAAQLCIDAGADLSLIPQWVEEGRRRAGNSSSPLRL
Ga0318562_101113491	3300032008	Soil	MATSKRDRALLADITGVARRLARGHKLTGAEQQEAAAALSHVAQGRADLLAESAGLAIGAHEGNPDEARYLQAAQLCIDAGADLAAIPDW
Ga0318575_101007232	3300032055	Soil	MASSKRDKALLAEITGVARRLARGHLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGANEGGRDETRHLQAAQLCIEAGADLSLIPQWVEEGRRRAGNSSSPLRL
Ga0318525_101062263	3300032089	Soil	MASSKRDKALLAEITGVARRLARGHLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGAHEGGRDEARHLRAAHLCIEAGADLSLIPQWVEEGRRRAGNSSSPLRL
Ga0307472_1008973402	3300032205	Hardwood Forest Soil	MASSKRDKALLAEITGVARRLARGQLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGTHEGGRDEARHLRAAQLCIDAGADLSLIPQWVEEGRRRSDGSPSPLRR
Ga0335082_105923001	3300032782	Soil	MASSKRDKALLAEINGVARRLARGQLSGAEQQEAAATLSQVARGRADLLAECAGLAIGTHEGSRDEARHLPAAQLCIDAGADLSLIPQWVEEGRRRAGGVPSPLRR
Ga0335079_1000133213	3300032783	Soil	MATSKRDRALLAEITGVARRLTHARPLTGAEQQEAAAALSQVACGRADLLAESAGLAIGAHEGAPDEGRYLQAAQLCIDAGADLSLIPDWIAEGRRRAGTTV
Ga0335079_119715131	3300032783	Soil	GVARRLARGQLSGAEQPEAAATLSQVAQGRADLLAESAGLAIGSHEGGRDEARHLRAAQLCIDAGADVSLIPEWVEEGRRRAGNSPSPLRR
Ga0335078_108110361	3300032805	Soil	MASSKRDKALLAEITGVARRLARGQRSGAEQQEAAAALSQVAQGRADLLAESAGLAIGGHEGGPDEARHLQAAQLCIDAGADLGLIPQWVGEGRRRAGGTPSALRR
Ga0335076_100119498	3300032955	Soil	MTSPKRDRVLVAEITGVARRLARGRPLTDAEQRDAAAMLSQVAKGRADLLAQSAGLAIGGHEGDPDEARYLQAAQLCIDAGADPGAVPGWIDEGRRRAAGPAGPVSPASTSTTAR
Ga0335077_101797143	3300033158	Soil	MASSKRDKALLAEITGVARRLARGQLSGAEQQEAAAALSQVAQGRADLLAESAGLAIGGHEGGPDEARHLQAAQLCIDAGADLGLIPQWVGEGRRRAGGTPSALRR
Ga0335077_102059662	3300033158	Soil	MASSKRDKALLAEITGVARRLARGQLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGSHEGGRDEARHLRAAQLCIDAGADVSLIPEWVEEGRRRAGNSPSPLRR
Ga0310914_114301491	3300033289	Soil	GSMATSKRDRALLADITGVARRLARGHKLTGAEQQEAAAALSHVAQGRADLLAESAGLAIGAHEGNPDEARYLQAAQLCIDAGADLAAIPDWIEEGRRRAGAA
Ga0318519_103583352	3300033290	Soil	MASSKRDKALLAEITGVARRLARGHLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGAHEGGRDEARHLRAAQLCIEAGADLSLIPQWVEEGRRRAGNSSSPLRL
Ga0314864_0148836_157_498	3300033805	Peatland	LLFIEHSFYYGPMATSKRDRALLAEITGVARRLARGQRLSGAEQQEAAATLSQVAQGRADLLAESAGLAIGTHEGGPDEARYLQAAQLCIDAGADLGLIPDWVEEGRRRAGAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062040

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences