Metagenome / Metatranscriptome Family F062070

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062070
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	77 residues
Representative Sequence	MHCKDVAPSRLPSFLLPCPHCGHRMAITAVAPARFASGVESNDLEDVTHGCVQCGTTLTRTVRPLTGDEQEIARRA
Number of Associated Samples	88
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.28 %
% of genes near scaffold ends (potentially truncated)	25.95 %
% of genes from short scaffolds (< 2000 bps)	75.57 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (54.198 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (16.030 % of family members)
Environment Ontology (ENVO)	Unclassified (28.244 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (74.809 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 2.88% β-sheet: 28.85% Coil/Unstructured: 68.27%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF07859	Abhydrolase_3	10.69
PF00135	COesterase	4.58
PF10116	Host_attach	3.05
PF12695	Abhydrolase_5	2.29
PF03401	TctC	1.53
PF02211	NHase_beta	1.53
PF07883	Cupin_2	1.53
PF13924	Lipocalin_5	1.53
PF01841	Transglut_core	1.53
PF00072	Response_reg	0.76
PF01470	Peptidase_C15	0.76
PF05683	Fumerase_C	0.76
PF05598	DUF772	0.76
PF14319	Zn_Tnp_IS91	0.76
PF02371	Transposase_20	0.76
PF02586	SRAP	0.76
PF08388	GIIM	0.76
PF04982	HPP	0.76
PF02979	NHase_alpha	0.76
PF06348	DUF1059	0.76
PF00313	CSD	0.76
PF05013	FGase	0.76
PF13175	AAA_15	0.76
PF13560	HTH_31	0.76
PF02357	NusG	0.76
PF02482	Ribosomal_S30AE	0.76
PF00753	Lactamase_B	0.76
PF00905	Transpeptidase	0.76
PF13502	AsmA_2	0.76
PF06863	DUF1254	0.76
PF10979	DUF2786	0.76
PF09587	PGA_cap	0.76
PF00584	SecE	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	10.69
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	4.58
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.53
COG0250	Transcription termination/antitermination protein NusG	Transcription [K]	0.76
COG0690	Preprotein translocase subunit SecE	Intracellular trafficking, secretion, and vesicular transport [U]	0.76
COG1544	Ribosome-associated translation inhibitor RaiA	Translation, ribosomal structure and biogenesis [J]	0.76
COG1838	Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain	Energy production and conversion [C]	0.76
COG2039	Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase)	Posttranslational modification, protein turnover, chaperones [O]	0.76
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.76
COG2443	Preprotein translocase subunit Sss1	Intracellular trafficking, secretion, and vesicular transport [U]	0.76
COG3448	CBS-domain-containing membrane protein	Signal transduction mechanisms [T]	0.76
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.76
COG3741	N-formylglutamate amidohydrolase	Amino acid transport and metabolism [E]	0.76
COG3931	Predicted N-formylglutamate amidohydrolase	Amino acid transport and metabolism [E]	0.76
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.20 %
Unclassified	root	N/A	45.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.20 %
Unclassified	root	N/A	45.80 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.20 %
Unclassified	root	N/A	45.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	35.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.37 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.80 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12.21 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.80 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2.29 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.76 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.76 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.76 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.80 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.53 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	0.76 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.76 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.76 %
Phyllobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Phyllobacterium	0.76 %
Aquabacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Aquabacter	0.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.80 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	1.53 %
Roseomonas oryzicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas oryzicola	0.76 %
Aquabacter spiritensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Aquabacter → Aquabacter spiritensis	0.76 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	0.76 %
Phyllobacterium trifolii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Phyllobacterium → Phyllobacterium trifolii	0.76 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.80 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.53 %
Roseomonas oryzicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas oryzicola	0.76 %
Aquabacter spiritensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Aquabacter → Aquabacter spiritensis	0.76 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	0.76 %
Phyllobacterium trifolii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Phyllobacterium → Phyllobacterium trifolii	0.76 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.76 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100153101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2179	Open in IMG/M
3300004092\|Ga0062389_100342724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1586	Open in IMG/M
3300004631\|Ga0058899_10117584	Not Available	739	Open in IMG/M
3300004633\|Ga0066395_10160875	All Organisms → cellular organisms → Bacteria → Proteobacteria	1146	Open in IMG/M
3300005332\|Ga0066388_100012601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6781	Open in IMG/M
3300005332\|Ga0066388_100229034	All Organisms → cellular organisms → Bacteria → Proteobacteria	2490	Open in IMG/M
3300005542\|Ga0070732_10326969	All Organisms → cellular organisms → Bacteria → Proteobacteria	922	Open in IMG/M
3300005764\|Ga0066903_100019912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7088	Open in IMG/M
3300005764\|Ga0066903_100462902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2127	Open in IMG/M
3300005764\|Ga0066903_102955945	Not Available	921	Open in IMG/M
3300005921\|Ga0070766_10070726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Aquabacter → Aquabacter spiritensis	2008	Open in IMG/M
3300005921\|Ga0070766_10576763	Not Available	754	Open in IMG/M
3300005921\|Ga0070766_11061064	Not Available	558	Open in IMG/M
3300006047\|Ga0075024_100048722	All Organisms → cellular organisms → Bacteria → Proteobacteria	1766	Open in IMG/M
3300006047\|Ga0075024_100115151	All Organisms → cellular organisms → Bacteria → Proteobacteria	1194	Open in IMG/M
3300006052\|Ga0075029_100378858	Not Available	916	Open in IMG/M
3300006057\|Ga0075026_100173507	Not Available	1119	Open in IMG/M
3300006086\|Ga0075019_10031887	All Organisms → cellular organisms → Bacteria → Proteobacteria	2957	Open in IMG/M
3300006174\|Ga0075014_100325489	Not Available	817	Open in IMG/M
3300006176\|Ga0070765_100875973	All Organisms → cellular organisms → Bacteria → Proteobacteria	849	Open in IMG/M
3300006893\|Ga0073928_10224509	Not Available	1453	Open in IMG/M
3300006893\|Ga0073928_10866315	Not Available	621	Open in IMG/M
3300009090\|Ga0099827_11834647	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300009525\|Ga0116220_10279939	Not Available	732	Open in IMG/M
3300009525\|Ga0116220_10581486	Not Available	514	Open in IMG/M
3300009633\|Ga0116129_1002517	All Organisms → cellular organisms → Bacteria	9261	Open in IMG/M
3300009683\|Ga0116224_10039549	All Organisms → cellular organisms → Bacteria → Proteobacteria	2312	Open in IMG/M
3300009683\|Ga0116224_10435127	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300009839\|Ga0116223_10726806	Not Available	569	Open in IMG/M
3300009839\|Ga0116223_10739649	Not Available	564	Open in IMG/M
3300010048\|Ga0126373_10481258	Not Available	1281	Open in IMG/M
3300010362\|Ga0126377_11831858	Not Available	682	Open in IMG/M
3300010376\|Ga0126381_100940807	Not Available	1245	Open in IMG/M
3300010376\|Ga0126381_101410480	Not Available	1007	Open in IMG/M
3300010376\|Ga0126381_102670333	Not Available	714	Open in IMG/M
3300010379\|Ga0136449_100034044	All Organisms → cellular organisms → Bacteria	12157	Open in IMG/M
3300010379\|Ga0136449_100125020	All Organisms → cellular organisms → Bacteria → Proteobacteria	5147	Open in IMG/M
3300010379\|Ga0136449_100167958	All Organisms → cellular organisms → Bacteria → Proteobacteria	4255	Open in IMG/M
3300010379\|Ga0136449_100511795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2080	Open in IMG/M
3300010379\|Ga0136449_100922024	All Organisms → cellular organisms → Bacteria	1420	Open in IMG/M
3300010379\|Ga0136449_103683288	Not Available	579	Open in IMG/M
3300010398\|Ga0126383_11019616	All Organisms → cellular organisms → Bacteria → Proteobacteria	916	Open in IMG/M
3300011411\|Ga0153933_1021328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1557	Open in IMG/M
3300012917\|Ga0137395_10299579	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300012923\|Ga0137359_10511048	Not Available	1059	Open in IMG/M
3300012971\|Ga0126369_11499490	Not Available	764	Open in IMG/M
3300014159\|Ga0181530_10234755	Not Available	990	Open in IMG/M
3300014493\|Ga0182016_10646901	Not Available	598	Open in IMG/M
3300014501\|Ga0182024_10899810	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300014838\|Ga0182030_11292128	Not Available	616	Open in IMG/M
3300016422\|Ga0182039_11413324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Phyllobacterium → Phyllobacterium trifolii	632	Open in IMG/M
3300016422\|Ga0182039_11715214	Not Available	575	Open in IMG/M
3300017943\|Ga0187819_10493131	Not Available	699	Open in IMG/M
3300017966\|Ga0187776_10263746	Not Available	1107	Open in IMG/M
3300017970\|Ga0187783_10183344	All Organisms → cellular organisms → Bacteria	1540	Open in IMG/M
3300018060\|Ga0187765_10510863	Not Available	762	Open in IMG/M
3300018060\|Ga0187765_11156849	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300018062\|Ga0187784_10140196	Not Available	1975	Open in IMG/M
3300018062\|Ga0187784_11690135	Not Available	501	Open in IMG/M
3300018085\|Ga0187772_11446330	Not Available	511	Open in IMG/M
3300018090\|Ga0187770_11600084	Not Available	531	Open in IMG/M
3300019192\|Ga0184603_149459	Not Available	814	Open in IMG/M
3300020581\|Ga0210399_10936468	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300020582\|Ga0210395_10568894	Not Available	852	Open in IMG/M
3300020583\|Ga0210401_10871282	All Organisms → cellular organisms → Bacteria → Proteobacteria	760	Open in IMG/M
3300021170\|Ga0210400_10824243	Not Available	760	Open in IMG/M
3300021170\|Ga0210400_11347033	Not Available	571	Open in IMG/M
3300021171\|Ga0210405_10438093	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300021171\|Ga0210405_10668488	Not Available	805	Open in IMG/M
3300021181\|Ga0210388_10680033	Not Available	897	Open in IMG/M
3300021401\|Ga0210393_11356852	Not Available	569	Open in IMG/M
3300021420\|Ga0210394_11261317	Not Available	633	Open in IMG/M
3300021420\|Ga0210394_11772436	Not Available	515	Open in IMG/M
3300021474\|Ga0210390_11168114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	623	Open in IMG/M
3300021478\|Ga0210402_11985252	Not Available	508	Open in IMG/M
3300021479\|Ga0210410_10992035	Not Available	729	Open in IMG/M
3300021559\|Ga0210409_10378685	Not Available	1269	Open in IMG/M
3300021861\|Ga0213853_10207112	All Organisms → cellular organisms → Bacteria → Proteobacteria	793	Open in IMG/M
3300021861\|Ga0213853_10212745	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300021861\|Ga0213853_10244049	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300025463\|Ga0208193_1010051	All Organisms → cellular organisms → Bacteria	2963	Open in IMG/M
3300026341\|Ga0257151_1002359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1866	Open in IMG/M
3300026341\|Ga0257151_1026572	All Organisms → cellular organisms → Bacteria → Proteobacteria	615	Open in IMG/M
3300026356\|Ga0257150_1075535	Not Available	512	Open in IMG/M
3300026359\|Ga0257163_1002380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2463	Open in IMG/M
3300026515\|Ga0257158_1000658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3921	Open in IMG/M
3300027030\|Ga0208240_1000569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4083	Open in IMG/M
3300027568\|Ga0208042_1176677	Not Available	531	Open in IMG/M
3300027635\|Ga0209625_1002244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4308	Open in IMG/M
3300027854\|Ga0209517_10256095	All Organisms → cellular organisms → Bacteria → Proteobacteria	1045	Open in IMG/M
3300027874\|Ga0209465_10000020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	64598	Open in IMG/M
3300027874\|Ga0209465_10028937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2601	Open in IMG/M
3300027898\|Ga0209067_10673088	Not Available	598	Open in IMG/M
3300027905\|Ga0209415_10211966	All Organisms → cellular organisms → Bacteria	1809	Open in IMG/M
3300027905\|Ga0209415_10325089	All Organisms → cellular organisms → Bacteria	1303	Open in IMG/M
3300027910\|Ga0209583_10387721	All Organisms → cellular organisms → Bacteria → Proteobacteria	661	Open in IMG/M
3300027910\|Ga0209583_10396890	Not Available	655	Open in IMG/M
3300027915\|Ga0209069_10012786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4023	Open in IMG/M
3300027915\|Ga0209069_10020675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3091	Open in IMG/M
3300027915\|Ga0209069_10208637	Not Available	1000	Open in IMG/M
3300028047\|Ga0209526_10137444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1714	Open in IMG/M
3300028536\|Ga0137415_10611269	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300028906\|Ga0308309_10485690	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300029943\|Ga0311340_10884707	All Organisms → cellular organisms → Bacteria → Proteobacteria	744	Open in IMG/M
3300029990\|Ga0311336_11575163	Not Available	579	Open in IMG/M
3300029999\|Ga0311339_11034832	Not Available	766	Open in IMG/M
3300030617\|Ga0311356_10098338	All Organisms → cellular organisms → Bacteria	3070	Open in IMG/M
3300030618\|Ga0311354_10033015	All Organisms → cellular organisms → Bacteria	6198	Open in IMG/M
3300031090\|Ga0265760_10263739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	600	Open in IMG/M
3300031525\|Ga0302326_10552761	Not Available	1727	Open in IMG/M
3300031525\|Ga0302326_11821679	Not Available	796	Open in IMG/M
3300031708\|Ga0310686_108031666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1043	Open in IMG/M
3300031708\|Ga0310686_111039770	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300031708\|Ga0310686_117485512	Not Available	2475	Open in IMG/M
3300031718\|Ga0307474_10112735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2038	Open in IMG/M
3300031719\|Ga0306917_11393493	Not Available	541	Open in IMG/M
3300031890\|Ga0306925_10236443	All Organisms → cellular organisms → Bacteria → Proteobacteria	1970	Open in IMG/M
3300031890\|Ga0306925_11182089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas oryzicola	768	Open in IMG/M
3300031910\|Ga0306923_11420507	Not Available	730	Open in IMG/M
3300032001\|Ga0306922_10176236	All Organisms → cellular organisms → Bacteria	2292	Open in IMG/M
3300032160\|Ga0311301_10036837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12105	Open in IMG/M
3300032160\|Ga0311301_10079215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6769	Open in IMG/M
3300032160\|Ga0311301_10135542	Not Available	4543	Open in IMG/M
3300032160\|Ga0311301_10219931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3205	Open in IMG/M
3300032160\|Ga0311301_10307836	All Organisms → cellular organisms → Bacteria → Proteobacteria	2528	Open in IMG/M
3300032515\|Ga0348332_11872516	Not Available	543	Open in IMG/M
3300032515\|Ga0348332_11951871	Not Available	534	Open in IMG/M
3300032515\|Ga0348332_13657389	Not Available	540	Open in IMG/M
3300032515\|Ga0348332_14287166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1178	Open in IMG/M
3300032515\|Ga0348332_14291454	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300032892\|Ga0335081_11233290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	850	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.24%
Host-Associated	Host-Associated	0.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.44%
Aquatic	Environmental → Aquatic	16.79%
Fungi	Host-Associated → Fungi	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.28%
Sediment	Environmental → Aquatic → Sediment	9.16%
Freshwater	Environmental → Aquatic → Freshwater	6.11%
Peat	Environmental → Terrestrial → Peat	5.34%
Plant Litter	Environmental → Terrestrial → Plant Litter	3.82%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.53%
Mycelium	Host-Associated → Fungi → Mycelium	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.38%
Loam	Environmental → Terrestrial → Soil → Loam	13.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.16%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.16%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.34%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.82%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	3.82%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.29%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.53%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.01%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.37%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.16%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.34%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	3.82%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.29%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.29%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.53%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.53%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.53%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.76%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	16.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.27%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	9.16%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.11%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.11%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.34%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.82%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.82%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	3.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.05%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	2.29%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.53%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.53%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.53%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.76%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.76%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.76%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.76%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.76%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.76%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011411	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ017 MetaG	Host-Associated	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019192	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZA3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025463	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes)	Environmental	Open in IMG/M
3300026341	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-A	Environmental	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300027030	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF041 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1001531012	3300002245	Forest Soil	SSMHYAHVAPSHLPSLMLPCPYCGHRMEITAVTPARYPNGTASNDLEDITHTCVQCGATLTRTRRPFSGDADATARPI*
Ga0062389_1003427241	3300004092	Bog Forest Soil	MPYEDVALSQLPSLLLPCPHGGQGMAITAVAPARYPNGVELNDLEDVTHGCVQCGTTLISTRRPFPRQLPSH
Ga0058899_101175841	3300004631	Forest Soil	MPRKDVALSWLPTFLLPCPHCGHRMTITSVAPARIDAGMESNDLEDVTHGCAQCGTTLTRTIRPLD
Ga0066395_101608752	3300004633	Tropical Forest Soil	VSFKGVAPSHLPSFLLPCPHCGHRMAITAVTPARFAGSVGSNDLEDITHSCVQCGTTLTRTVRPHSGDEQETTLRA*
Ga0066388_1000126014	3300005332	Tropical Forest Soil	VSFKDVAPSRLPSFLLPCPHCGHRMAVMAVTPARFAGSVGSNDLEDITHGCVQCGTTLTRTVRPHSGSEEEITLRA*
Ga0066388_1002290341	3300005332	Tropical Forest Soil	IREYSVSFKGVAPSHLPSFLLPCPHCGHRMAITAVTPARFAGSVGSNDLEDITHSCVQCGTTLTRTVRPHSGDEQETTLRA*
Ga0070732_103269692	3300005542	Surface Soil	MHRKDVAPSWLPTFLLPCPHCGHRMAVTSVAPARIEGGMESNNLEDVTHGCVQCGTTLTRTIRPLDAQQVVQPV*
Ga0066903_1000199122	3300005764	Tropical Forest Soil	LSFKGAAPSHLPSFLLPCPHCGHRMAITSVTPAQFSGSVESHDLEDITHGCVQCGTTLTRTVRLRSDDEQEAALRA*
Ga0066903_1004629022	3300005764	Tropical Forest Soil	MPRKDVAPSWLPTFLLPCPHCGHRMTITSVAPARIDAGMEANDLEDVTHGCAKCGTTLTRTIRPLDAHQIAQRV*
Ga0066903_1029559452	3300005764	Tropical Forest Soil	MHHKDVAPSRLPSFLLPCPHCGHRMVIIAVTPARFADVDSNDLEDITHGCVQCGTTLTRTVRPLVDDEQETALRL*
Ga0070766_100707261	3300005921	Soil	MPRKDVAASWLPTFLLPCPHCGHRMTITSVAPARIDAGMESNDLEDVTHGCAQCGTTLTRTIRPLDAHQIAPRV*
Ga0070766_105767631	3300005921	Soil	MRYLSIAASRLPSFLLPCPHCGHRMVITAVTAVAPAQLDSGAGLDNLEDVTHTCVQCGTFLTRTIRLLTGDAHTTADRL*
Ga0070766_110610643	3300005921	Soil	MDFKDVAPSLLPSFLLPCPHCGHRMAITAVAPARYANGVESNDLEDVIHSCVQCGTKLTRTIRPLSG
Ga0075024_1000487221	3300006047	Watersheds	MPFNDVTPSRLPSFLLPCPHCGHRMAITAVTPARFGGGMESNDLNDITHGCVQCGTTLIRTVRPFTGDEHELALIA*
Ga0075024_1001151512	3300006047	Watersheds	MPFKDVAPSRLPSFLLPCPHCGHRMAITAVTPARFASGVESNDLEDITHGCVQCGTSLTRTVRPFTGDEHETLLRV*
Ga0075029_1003788582	3300006052	Watersheds	MPIKDVTPSRLPSFLLPCPHCGHRMAITAVTPAQFSGGIESNDLEDVTHGCVQCGTTLTRTVRPFAGEGHEIARRA*
Ga0075026_1001735072	3300006057	Watersheds	MPFKDVTPSRLPSFLLPCPHCGHRMIITAVAPARFASGVESNHLEDITHGCVQCGTTLVRTVRPFAGDDPELALRA*
Ga0075019_100318873	3300006086	Watersheds	MPFKDITPSRLPSFLLPCPHCGQRMTITAVTPARFSTGIESNDLEDVTHGCVQCGTTLTRTVRPFTGDSHEIARRA*
Ga0075014_1003254891	3300006174	Watersheds	MHRKDVTPSRLPTFLLPCPHCGHRMAVTEVTPARYPGGGGSNDLDDVTHGCVQCGTTLTRTVRHLSVDHGSVAQRA*
Ga0070765_1008759731	3300006176	Soil	SWLPTFLLPCPHCGHRMTITSVAPARIDAGMESNDLEDVTHGCAQCGTTLTRTIRPLDAHQIAPRV*
Ga0073928_102245091	3300006893	Iron-Sulfur Acid Spring	MHFKDVAQSRLPSFLLPCPHCGHRMAITAVAPALIDNGVESNDLEDVTHGCVQCGTTLTRTIRPLS
Ga0073928_108663152	3300006893	Iron-Sulfur Acid Spring	MQCKDVSSSRLPSFLLPCPHCGHRMAITSVTPSRYANGVESNDLEDVTHTCVQCGTMLTRTIRPLSGGGFAGRV*
Ga0099827_118346472	3300009090	Vadose Zone Soil	MHCKDVAPSRLPSFLLPCPHCGHRMAITAVAPARFASGVESNDLEDVTHGCVQCGTTLTRTVRPLTGDEQEIARRA*
Ga0116220_102799392	3300009525	Peatlands Soil	IARRMIIGIGTPSDVAPSRLPSFLLPCPLFGHRMAITAVSPARLENGAQSNDLEDVTHTCVQCGTTLTRTIRPLSGHVHEIAPQV*
Ga0116220_105814861	3300009525	Peatlands Soil	MHRNDVAASRLPSFLLPCPHCGHRMAITAVAPARVDTGVESNDLEDVTHGCVQCGTTLTRTVRPRAGDAHEIAPRL*
Ga0116129_10025176	3300009633	Peatland	MRSGTFGKLENAMHRKDVAPSRLPSFLLPCPHCGHRMAVTGVVPARFDTGVESNDLEDVTHGCVQCGTTLTRTVRPLTGDAHEIARQF*
Ga0116224_100395491	3300009683	Peatlands Soil	ARNRESSMHFKDVAPSRLPSFLLPCPHCGHRMAITAVSPARFDNGVESNDLEDITHGCVQCGTTLTRTVRPLGADEVAARA*
Ga0116224_104351272	3300009683	Peatlands Soil	YRDAAPSGLPSFLLPCAHCGHRMVITGVAPARLASGVASNDLEDVTHSCVQCGTTLIRTIRPLLGDAHEIARRV*
Ga0116223_107268061	3300009839	Peatlands Soil	MRYRDAAPSGLPSFLLPCSHCGHRMVITGVAPARLASGVASNDLEDVTHSCVQCGTTLTRTIRPLLGGAREIARRV*
Ga0116223_107396491	3300009839	Peatlands Soil	VKPGELKNWESSMDFKDVAPSLLPSFLLPCPHCGHRMAITAVAPARYANGVESNDLEDVIHSCVQCGMTLTRTIRPLSGDVHEIVPRV*
Ga0126373_104812582	3300010048	Tropical Forest Soil	MAAVHKEAWRVTFGGFMSGIPSHLPSFLLPCPHCGRRMAITAVTPASSSGGAESSNLEDITHGCVQCGTTLTRTVRPRAEDDRKTAVRA*
Ga0126377_118318581	3300010362	Tropical Forest Soil	HGGNRGRRELLPVSFNNVIRSNLPSFLLPCPYCGHRMAITAVTPARSGGSAETSNLEDITHGCVQCGTTLTRTVRPLAVAEDDRETAA*
Ga0126381_1009408075	3300010376	Tropical Forest Soil	MPRKDVVLSWLPTFLLPCPHCGHRMTITSVAPARIDAGMESNDLEDVTHGCAQCGTTLTRTIRPLDAHQIAQRV*
Ga0126381_1014104802	3300010376	Tropical Forest Soil	FVSFKGATPSHLPSFLLPCPHCGHRMAITSVAPAQFTGSVESHDLEDITHGCVRCGTTLTRTVRLRSDDEQEAALRV*
Ga0126381_1026703331	3300010376	Tropical Forest Soil	MAAVHKEAWRVTFGGFMSGIPSHLPSFLLPCPHCGRRMAITAVTPASSSGGTESSNLEDITHGCVQCGTTLTRTVRPRAEDDRKTAVRA*
Ga0136449_10003404411	3300010379	Peatlands Soil	MDCKDVAPSRLPTFLLPCPHCGRRMAITAVAPAQFDGVQSNTLEDVTHGCPQCGTTLTRTVCPLNGDARAIAQRS*
Ga0136449_1001250204	3300010379	Peatlands Soil	MAAAQPETAMDRKDVAPSRLPTFLLPCPHCGQRMAIMSVAPAVFNVGVEANDLEDVTHACQQCGTTLTRTVRPFAGDDHEIARRL*
Ga0136449_1001679581	3300010379	Peatlands Soil	MRYRDAAPSGLPSFLLPWSHCGQRMVITGVAPARLASGVASNDLEDVTHSCVQCGTTLTRTIRPLLGGAREIARRV*
Ga0136449_1005117952	3300010379	Peatlands Soil	MIIGIGTPSDVAPSRLPSFLLPCPLFGHRMAITAVSPARLENGAQSNDLEDVTHTCVQCGTTLTRTIRPLSGHVHEIAPQV*
Ga0136449_1009220241	3300010379	Peatlands Soil	SFLLPCPHCGHRMAITAVAPARYANGVESNDLEDVIHSCVQCGTKLTRTIRPLSGDVHEIAPRG*
Ga0136449_1036832882	3300010379	Peatlands Soil	SFLLPCPHCGHRMAITAVAPARYANGVESNDLEDVIHSCVQCGMTLTRTIRPLSGDVHEIVPRV*
Ga0126383_110196162	3300010398	Tropical Forest Soil	FMSGIPSHLPSFLLPCPHCGRRMTITAVTPAGSDGGAESGNLEDITHGCVQCGTTLTRTVRPRAEDDRKTAVRA*
Ga0153933_10213283	3300011411	Attine Ant Fungus Gardens	MDTKDVAPSHLPTFLLPCPHCGQRMAITAVTPAQFDGVQSNTLEDVTHGCPQCGTTLIRTVCPLYGDARAIAQRS*
Ga0137395_102995791	3300012917	Vadose Zone Soil	MHKDVTPSRLPSFLLPCPHCGHRMAITAVAPARFASGVESNDLEDVTHGCVQCGTTLTRTVRPLAGDAHEIAQRI*
Ga0137359_105110482	3300012923	Vadose Zone Soil	WEYSVPFKGVTPSSLPSFLLPCPHCGHRMVIMAVTPARFAGSIDSNDLEDITHGCVQCGTTLTRTVRPLASEEHETALRV*
Ga0126369_114994902	3300012971	Tropical Forest Soil	TFVSFKGATPSHLPSFLLPCPHCGHRMAITSVAPAQFTGSVESHDLEDITHGCVRCGTTLTRTVRLRSDDEQEAALRV*
Ga0181530_102347551	3300014159	Bog	MKLETGASMDCKDVAPSRLPTFLLPCPHCGRRMAITAVAPAQFDGVQSNTLEDVTHGCPQCGTTLTRTVCPLNGDARAIAQRS*
Ga0182016_106469011	3300014493	Bog	MRHLDVAPSRLPSLFLPCPHCGHRMVVTAVEPALLANGTPSNDLQEVTHGCVQCGTQLSRTIRTLSGAA*
Ga0182024_108998103	3300014501	Permafrost	MRYKGVAPSHLPSFLLPCPHCGHRMAITSIAPARYDDGAESNDLEDVTHGCVHCGTTLISTRRSLSDDAYAIAHRV*
Ga0182030_112921281	3300014838	Bog	MHRKDVTPSRLPTFLLPCPHCGHRMAVTAVTPVRYPNGGGSNDLDDVTHGCVQCGTTLTRTVRHLSSDDYVIAQRA*
Ga0182039_114133241	3300016422	Soil	MPFRDVIPSRLPSFLLPCPHCGHRMTITAVTRARFAGGVESNDLEDITHGCVQCGTTLTRTVRPRTGDERETALRL
Ga0182039_117152142	3300016422	Soil	MPRKDVAPSWLPTFLLPCPHCGHRMTITSVAPARIDAGMEANDLEDVTHGCAQCGTTLTRTIRPL
Ga0187819_104931312	3300017943	Freshwater Sediment	MDRKNISPSHLPSFLLPCPHCGHRMNIVTVAPARLEGGSVANDLEDVTHGCEQCGATLSRMVRPLGGYAQEIAR
Ga0187776_102637461	3300017966	Tropical Peatland	MDRKDVAPSRLPTFLLPCPRCGRRMGITAVAPAKLDDARSNTLEDVTHGCPQCGTKLTRTVRPLRGDARTLAQRS
Ga0187783_101833442	3300017970	Tropical Peatland	MRRKDIATSGLPTFLLPCPHCGHRMAVTAVAPAWFGIGIDSNEAEEITHGCVQCGTTLSRTVRPLDAEAREVARRVVA
Ga0187765_105108631	3300018060	Tropical Peatland	MHYKDIAPSRLPSFLLPCPHCGHRMAITAISPARFDNGTESNDLEDITHGCVQCGTTLTRTVRPLSGGAEEIAQRG
Ga0187765_111568492	3300018060	Tropical Peatland	MSFLLPCPHCGHRMAVVTVAPTRTDTGADSNELEDVTHGCVQCGTTLTRTVRPFTGEDHEIALLL
Ga0187784_101401961	3300018062	Tropical Peatland	REKRVMHRRDIAPSSLPSFLLPRPQCGHRMHIISIAPARLDNGSAANDLEDVTHACVQCGTTLSRLVRPLNGYVPELTRSA
Ga0187784_116901351	3300018062	Tropical Peatland	MAAMEPKKVLGPKDVAPSRLPTFLLPCPHCGQRMAVTAVAPAQFEGGAEGQNLEDVTHGCPQCGTTLTRTVRLLAGDAHEIAQRF
Ga0187772_114463302	3300018085	Tropical Peatland	MRSGDSSSRLPSFLLPCTHCGHRMVVTAVTPLRVADGVESDDLEDVTHSCVQCGATLIRTVRHFSVDTRPIANRV
Ga0187770_116000841	3300018090	Tropical Peatland	MHRKDVSPSRLPSFLLPCPHCGHRMAVVTVAPTRMDTGAESNELEDVTHGCVQCGTTLTRTVRPFTGEDHEIALLL
Ga0184603_1494591	3300019192	Soil	MHHKDVAPSRLPSFFLPCPHCGHRMAISGVAPARLGNGAESNDLEDVTHSCVQCGTTLTRTIRPL
Ga0210399_109364682	3300020581	Soil	MPRKDVAASWLPTFLLPCPHCGHRMTITSVAPARIDAGMESNDLEDVTHGCAQCGTTLTRTIRPLDAHQIAPRV
Ga0210395_105688941	3300020582	Soil	MRYLSIAASRLPSFLLPCPHCGHRMVITAVTAVAPAQLDSGAGSDNLEDVTHTCVQCGTFLTRTIRLLTGDAHTTADRL
Ga0210401_108712822	3300020583	Soil	MHYKDVAPSRLPSFLLPCPHCGHRMAITAVSPARFDNGVESNDLEDITHGCVQCGTTLTRTVRPLSADAQEIAVRV
Ga0210400_108242431	3300021170	Soil	MPRKDVALSWLPTFLLPCPHCGHRMTITSVAPARIDAGMESNDLEDVTHGCAQCGTTLTRTIRPLDAHQIAPRV
Ga0210400_113470331	3300021170	Soil	MRYLSIAASRLPSFLLPCPHCGHRMVITAVTAVAPAQLDSGAGLDNLEDVTHTCVQCGTFLTRTIRLLDG
Ga0210405_104380931	3300021171	Soil	MHFKDVAPSRLPSFLLPCPHCGHRMAITAVSPARFDNGVESNDLEDITHGCVQCGTTLTRTVRPLSADAREVAARV
Ga0210405_106684882	3300021171	Soil	MRYLSIAASRLPSFLLPCPHCGHRMVITAVTAVAPAQLDSGAGLDNLEDVTHTCVQCGTFLTRTIRLLTGDAHTTADRL
Ga0210388_106800332	3300021181	Soil	MHFKSSNPSHLPSIFLPCSHCGSRMTITAVAPARLANGAISNDLEDVTHTCVQCGTVLISTKPFSDDARGIAHRI
Ga0210393_113568521	3300021401	Soil	MHFKDVAPSRLPSFLLPCPHCGHRMAITAVSPARFDNGVESNDLEDITHGCVQCGTTLTRTVRPLSADAREV
Ga0210394_112613171	3300021420	Soil	MRYLSIAASRLPSFLLPCPHCGHRMVMTAVTAVAPAQLDSGAGLDNLEDVTHTCVQCGTFLTRTIRLLTGDAHTIVDRL
Ga0210394_117724361	3300021420	Soil	MDFKYVAPSLLPSFLLPCPHCGHRMAITAVAPARYANGVESNDLEDVTHSCAQCGTTLTRTIRPLSCDVHEIVPRV
Ga0210390_111681141	3300021474	Soil	APSHLPSFLLPCPHCGHRMAVTSVAPARDDDGAESNDLEDVIHGCVQCGTTLISTRRSLSDHSPAIAQRV
Ga0210402_119852522	3300021478	Soil	VKTGTSRNREYSVPFKDVTPSRLPSFLLPCPHCGHRMVIMAVTPARFAGSVDSNDLEDITHGCVQCGTTLTRTVRPLTGEEHETALRL
Ga0210410_109920351	3300021479	Soil	MRYLSIAASRLPSFLLPCPHCGHRMVMTAVTAVAPAQLDSGAGLDDLEDVTHTCVQCGTSLTRTIRLLTGDAHTTADRL
Ga0210409_103786852	3300021559	Soil	MPRKDVAWSWLPTFLLPCPHCGHRMTITSVAPARIDAGMESNDLEDVTHGCAQCGTTLTRTIRPLDAHQIAPRV
Ga0213853_102071121	3300021861	Watersheds	MPFKDITPSRLPSFLLPCPHCGQRMTITAVTPARFSTGIESNDLEDVTHGCVQCGTTLTRTVRPFTGDSHEIARRA
Ga0213853_102127451	3300021861	Watersheds	MPFKAVTPSRLPSFLLPCPHCGHRMAITAVTPAQFSSGIESNDLEDVTHGCVQCGTTLTRTVRPFAGEGHEIVRRA
Ga0213853_102440492	3300021861	Watersheds	RLPSFLLPCPHCGHRMIITAVAPARFASGVESNHLEDITHACVQCGTTLVRTVRPFAGDDPELALRA
Ga0208193_10100512	3300025463	Peatland	MHRKDVAPSRLPSFLLPCPHCGHRMAVTGVVPARFDTGVESNDLEDVTHGCVQCGTTLTRTVRPLTGDAHEIARQF
Ga0257151_10023592	3300026341	Soil	VPFKDVTPSRLPSFLLPCPHCGHRMVIMAVTPARFAGSVDSNDLEDITHGCVQCGTTLTRTVRPLTGEEPETALRVV
Ga0257151_10265721	3300026341	Soil	IRSNLPSFLLPCPYCGHRMAITAITPARSSESAESAHLEDITHGCVQCGTTLTRTVRQLAEGDREIALRA
Ga0257150_10755351	3300026356	Soil	MTVVEPGVPGREYSVSFKDVAPSHLPSFILPCPHCGHRMAITAVTPAWFNGDAESGNLEDITHGCVQCGTTLTRTVRPLAEDEQKTALRA
Ga0257163_10023804	3300026359	Soil	VPFKDVTPSSLPSFLLPCPHCGHRMVIMAVTPARFAGSVDSNDLEDITHGCVQCGTTLTRTVRPLTGEEHETALRV
Ga0257158_10006581	3300026515	Soil	TLTQIGPEMVGVKTGPSRNWEYSVPFKDVTPSSLPSFLLPCPHCGHRMVIMAVTPARFAGSVDSNDLEDITHGCVQCGTTLTRTVRPLTGEEHETALRV
Ga0208240_10005691	3300027030	Forest Soil	MTAVESEVLERDSSMRCNGVAPSHLPSFLLPCPHCGHRMAVTSVAPARDDDGAESNDLEDVIHGCVQCGTTLISTRRSLSDDSHAIAHRV
Ga0208042_11766771	3300027568	Peatlands Soil	MHFKDVAPSRLPSFLLPCPHCGHRMAITAVSPARLENGAQSNDLEDVTHGCVQCGTTLTRTVRPRAGDAHEIAPRL
Ga0209625_10022444	3300027635	Forest Soil	VPFKDVTPSSLPSFLLPCPHCGHRMVIMAVTPARFAGSVDSNDLEDITHGCVQCGTTLTRTVRPLASEEHETALRV
Ga0209517_102560952	3300027854	Peatlands Soil	MHFKDVAPSRLPSFLLPCPHCGHRMAITAVSPARFDNGVESNDLEDITHGCVQCGTTLTRTVRPLGADEVAARA
Ga0209465_1000002036	3300027874	Tropical Forest Soil	LSFKGAAPSHLPSFLLPCPHCGHRMAITSVTPAQFSGSVESHDLEDITHGCVQCGTTLTRTVRLRSDDEQEAALRA
Ga0209465_100289371	3300027874	Tropical Forest Soil	VSFKDVAPSRLPSFLLPCPHCGHRMAVMAVTPARFAGSVGSNDLEDITHGCVQCGTTLTRTVRPHSGSEQEITLRA
Ga0209067_106730881	3300027898	Watersheds	MLEPGDLGTGNGRAPMPYKDVTASRLPSFLLPCPHCGHRMAITAVAPARFAGGIESNDLEDVTHGCVQCGTTLIRTIRPFTGDEHAIARRA
Ga0209415_102119662	3300027905	Peatlands Soil	MHRNDVAASRLPSFLLPCPHCGHRMAITAVAPARVDTGVESNDLEDVTHGCVQCGTTLTRTVRPRAGDAHEIAPRL
Ga0209415_103250891	3300027905	Peatlands Soil	MRYRDAAPSGLPSFLLPCSHCGHRMVITGVAPARLASGVASNDLEDVTHSCVRCGTTLTRTIRPLLGGAREIARRV
Ga0209583_103877211	3300027910	Watersheds	NGTGTSRNREYSVSFKNVIPSLLPSFLLPCPHCGHRMAVTAVAPARFAGGVESNDLEDITHGCVQCGTTLTRTVRPLAGDEQETALRV
Ga0209583_103968902	3300027910	Watersheds	MPFKDVAPSRLPSFLLPCPHCGHRMIITAVAPARFASGVESNHLEDITHACVQCGTTLVRTVRPFAGDDPELALRA
Ga0209069_100127862	3300027915	Watersheds	MPFNDVTPSRLPSFLLPCPHCGHRMAITAVMPARFGGGMESNDLNDITHGCVQCGTTLIRTVRPFTGDEHELALIA
Ga0209069_100206751	3300027915	Watersheds	MPFKDVTPSRLPSFLLPCPHCGHRMIITAVAPARFASGVESNHLEDITHGCVQCGTTLVRTVRPFAGDDPELALRA
Ga0209069_102086371	3300027915	Watersheds	MPFKDVAPSRLPSFLLPCPHCGHRMAITAVTPARFASGVESNDLEDITHGCVQCGTSLTRTVRPFTGDEHETLLRV
Ga0209526_101374442	3300028047	Forest Soil	MYRNGIAPSRLPTFLLPCPHCGHRMAITGVAPARLDSGSASNDLEDVTHGCVQCGTTLTRTVRPQSDDADDIARRFRPGPNVF
Ga0137415_106112692	3300028536	Vadose Zone Soil	VPFKDVTPSRLPSFLLPCPHCGHRMAITAVTRARFASGVESNDLEDVTHGCMQCGTTLTRTVRPFTGDDHEIARRA
Ga0308309_104856901	3300028906	Soil	MPRKDVAASWLPTFLLPCPHCGHRMTITSVAPARIDAGMESNDLEDVTHGCAQCGTTLTRTIRPLDAHQIAPRL
Ga0311340_108847071	3300029943	Palsa	MRYKNVAPSFLPSFLLPCPYCGHRMALTSVAPARYPNGAESNDLEDVTHSCVQCGTTLVRTRRSLPDYSHEVVARRA
Ga0311336_115751632	3300029990	Fen	MHRKDVTPSRLPTFLLPCPHCGHRMAVTAITPVRYPNGGGSNDLDDVTHGCVQCGTTLTRTVRHLSADDYIIAQRA
Ga0311339_110348321	3300029999	Palsa	MHDKDVAPSRLPSFLLPCPHCGHRMEITAVAPTRLANGAESNDLEDVTHACVQCGATLTRTKRPFSDDAREIARRL
Ga0311356_100983384	3300030617	Palsa	KNVAPSFLPSFLLPCPYCGHRMALTSVAPARYPNGAESNDLEDVTHSCVQCGTTLVRTRRSLPDYSHEVVARRA
Ga0311354_100330151	3300030618	Palsa	RYKNVAPSFLPSFLLPCPYCGHRMALTSVAPARYPNGAESNDLEDVTHSCVQCGTTLVRTRRSLPDYSHEVVARRA
Ga0265760_102637391	3300031090	Soil	MRYKDVTPSRLPSFLLPCPHCGHRMAITAVSPARFDNGVESNDLEDITHGCLQCGTTLTRTVRPLDADAHEVAARA
Ga0302326_105527612	3300031525	Palsa	MHRKDVSPSRLPSFLLPCPHCGHRMAIATVAPARFDSGAESNELEDVTHACVQCGTTLTRTVRQFTGDAHEIARRL
Ga0302326_118216791	3300031525	Palsa	MAAAEAGDLRTGRDPMHVKDVAPSRLPSFLLPCPHCGHRMEITAVAPTRLANGAESNDLEDVTHACVQCGATLTRTKRPFSDDAREIARRL
Ga0310686_1080316661	3300031708	Soil	MQRKSFLPSHLPSFLLPCPHCGHRMNIISVAPARLGNGSAANDIDDVTHRCVQCGTSLSRMVRPLGGEDREIAHRF
Ga0310686_1110397702	3300031708	Soil	MQRKEISPSRLPSFLLPCPHCGHRMAIVSVAPARLGNGSAANDLDDVTHRCVQCGTTLSRMVRPLDDESRGITQRL
Ga0310686_1174855124	3300031708	Soil	MHHKDVAPSRLPSFFLPCPHCGHRMAISGVAPARLGNGAESNDLEDVTHSCVQCGTTLTRTIRPLSGDVHEVMRRL
Ga0307474_101127352	3300031718	Hardwood Forest Soil	MDIVEPGELGTGEGSMHYKDVAPSRLPSFLLPCPHCGHRMAITAVCPARFDNGVESNDLEDVTHGCVQCGTTLTRTVRPLGGDAHEVAARA
Ga0306917_113934931	3300031719	Soil	MPFRDVIPSRLPSFLLPCPHCGHRMTITAVTRARFAGGVESNDLEDITHGCVQCGTTLTRTVRPRTGDERETALRLISSP
Ga0306925_102364433	3300031890	Soil	MPRKDVAPSWLPTFLLPCPHCGHRMTITSVSPARIDAGMESNDLEDVTHGCAQCGTTLTRTIRPLADAEQIVQRV
Ga0306925_111820892	3300031890	Soil	VSFKGVALSHLPSFLLPCPHCGHRMAITAVAPARFAGSVGSNDLEDITHGCVQCGTTLTRTVRPHNAEEQETTLRA
Ga0306923_114205072	3300031910	Soil	MPRKDVAPSWLPTFLLPCPHCGHRMTITSVSPARIDAGMESNDLEDVTHGCAQCGTTLTRTIRPLDAHQIAQRV
Ga0306922_101762361	3300032001	Soil	MPRKDVAPSWLPTFLLPCPHCGHRMTITSVAPARIDAGMEANDLEDVTHGCAKCGTTLTRTIRPLDAHQIAQRV
Ga0311301_1003683711	3300032160	Peatlands Soil	MDCKDVAPSRLPTFLLPCPHCGRRMAITAVAPAQFDGVQSNTLEDVTHGCPQCGTTLTRTVCPLNGDARAIAQRS
Ga0311301_1007921514	3300032160	Peatlands Soil	MDFKDVAPSLLPSFLLPCPHCGHRMAITAVAPARYANGVESNDLEDVIHSCVQCGMTLTRTIRPLSGDVHEIVPRV
Ga0311301_101355422	3300032160	Peatlands Soil	MRYRHAGPSGLPSFLLPCSHCGHRMVITGVVPALLANGAESNDLDEVTHSCVQCGTALTRTIRPLLGDAHEIARRA
Ga0311301_102199313	3300032160	Peatlands Soil	MIIGIGTPSDVAPSRLPSFLLPCPLFGHRMAITAVSPARLENGAQSNDLEDVTHTCVQCGTTLTRTIRPLSGHVHEIAPQV
Ga0311301_103078361	3300032160	Peatlands Soil	MDRKDVAPSRLPTFLLPCPHCGQRMAIMSVAPAVFNVGVEANDLEDVTHACQQCGTTLTRTVRPFAGDDHEIARRL
Ga0348332_118725162	3300032515	Plant Litter	NAMHRKDVAPSRLPSFLLPCPHCGHRMAVTGVVPARFDTGVESNDLEDVTHGCVQCGTTLTRTVRPLTGDALEIAQRI
Ga0348332_119518711	3300032515	Plant Litter	MRYKDVAPSRLPSFLLPCPHCGHRMAITAVSPARFDNGVESNDLEDITHGCLQCGTTLTRTVRPLGADAHEVAARA
Ga0348332_136573892	3300032515	Plant Litter	MRYTDFASSSLPSLLLPCSLCGHRMEITAVAPARYANGAESNDLEDVTQTCVQCGAMLIRTIRPLTGDPHAIAYRV
Ga0348332_142871663	3300032515	Plant Litter	MQRKEISPSRLPSFLLPCPHCGHRMAIVSVAPARLGNGSAANDLDDVTHRCVQCGTSLSRMVRPLGGEDREIAHRF
Ga0348332_142914541	3300032515	Plant Litter	GRDPCITRTLPPLGLPSLLLPCSQCGHRMEITAVAPARYENGAESNDLEDITHTCVQCGATLVRTIRPFTGAVHAIPYRI
Ga0335081_112332901	3300032892	Soil	MDRKDIAPSRLPTFLLPCPHCGQRMAITAVTPVQFNVGPGDLGLDDVTHGCVQCGTTLTRTVRSLRGEEHDLARRF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062070

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences