Metagenome Family F062104

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062104
Family Type	Metagenome
Number of Sequences	131
Average Sequence Length	79 residues
Representative Sequence	MTDQAWRNANLVRLRKAVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGTIDPDLSFSVAHSTHASEDVRVCSLAAAA
Number of Associated Samples	108
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.29 %
% of genes near scaffold ends (potentially truncated)	27.48 %
% of genes from short scaffolds (< 2000 bps)	72.52 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.183 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (14.504 % of family members)
Environment Ontology (ENVO)	Unclassified (36.641 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.038 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.59% β-sheet: 9.26% Coil/Unstructured: 73.15%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF00069	Pkinase	7.63
PF07676	PD40	4.58
PF05227	CHASE3	3.05
PF10756	bPH_6	3.05
PF01182	Glucosamine_iso	3.05
PF00072	Response_reg	2.29
PF06271	RDD	2.29
PF00512	HisKA	2.29
PF05690	ThiG	1.53
PF03544	TonB_C	1.53
PF02371	Transposase_20	1.53
PF13744	HTH_37	1.53
PF13649	Methyltransf_25	1.53
PF04255	DUF433	0.76
PF00196	GerE	0.76
PF00759	Glyco_hydro_9	0.76
PF00571	CBS	0.76
PF05050	Methyltransf_21	0.76
PF12543	DUF3738	0.76
PF00239	Resolvase	0.76
PF13673	Acetyltransf_10	0.76
PF13683	rve_3	0.76
PF09865	DUF2092	0.76
PF01548	DEDD_Tnp_IS110	0.76
PF07883	Cupin_2	0.76
PF07244	POTRA	0.76
PF08240	ADH_N	0.76
PF00884	Sulfatase	0.76
PF14667	Polysacc_synt_C	0.76
PF06283	ThuA	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	30.53
COG0363	6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase	Carbohydrate transport and metabolism [G]	3.05
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	2.29
COG3547	Transposase	Mobilome: prophages, transposons [X]	2.29
COG0214	Pyridoxal 5'-phosphate synthase subunit PdxS	Coenzyme transport and metabolism [H]	1.53
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	1.53
COG2022	Thiazole synthase ThiGH, ThiG subunit (thiamin biosynthesis)	Coenzyme transport and metabolism [H]	1.53
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	1.53
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.76
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.76
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.76
COG4813	Trehalose utilization protein	Carbohydrate transport and metabolism [G]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.18 %
Unclassified	root	N/A	3.82 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.18 %
Unclassified	root	N/A	3.82 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.18 %
Unclassified	root	N/A	3.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	77.86 %
Unclassified	root	N/A	3.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	52.67 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	12.98 %
Unclassified	root	N/A	3.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	52.67 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	12.21 %
Unclassified	root	N/A	3.82 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	52.67 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	12.21 %
Unclassified	root	N/A	3.82 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	52.67 %
Unclassified	root	N/A	3.82 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3.05 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	2.29 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	52.67 %
Unclassified	root	N/A	3.82 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3.05 %
unclassified Acidobacterium	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium	0.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	52.67 %
Unclassified	root	N/A	3.82 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3.05 %
Acidobacterium sp. S8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8	0.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101432120	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300000789\|JGI1027J11758_13046436	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1212	Open in IMG/M
3300003505\|JGIcombinedJ51221_10118783	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1059	Open in IMG/M
3300005290\|Ga0065712_10313610	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	840	Open in IMG/M
3300005328\|Ga0070676_10113630	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1690	Open in IMG/M
3300005330\|Ga0070690_100274450	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1200	Open in IMG/M
3300005333\|Ga0070677_10078177	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1409	Open in IMG/M
3300005333\|Ga0070677_10868547	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300005334\|Ga0068869_100337886	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300005336\|Ga0070680_100130460	All Organisms → cellular organisms → Bacteria → Acidobacteria	2102	Open in IMG/M
3300005337\|Ga0070682_100267353	All Organisms → cellular organisms → Bacteria → Acidobacteria	1240	Open in IMG/M
3300005440\|Ga0070705_100133286	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1624	Open in IMG/M
3300005458\|Ga0070681_10404426	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1277	Open in IMG/M
3300005459\|Ga0068867_100089405	All Organisms → cellular organisms → Bacteria	2335	Open in IMG/M
3300005459\|Ga0068867_100193452	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1624	Open in IMG/M
3300005466\|Ga0070685_10424703	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	926	Open in IMG/M
3300005467\|Ga0070706_101062257	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300005547\|Ga0070693_100626396	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	779	Open in IMG/M
3300005578\|Ga0068854_100023281	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	4229	Open in IMG/M
3300005615\|Ga0070702_100269795	All Organisms → cellular organisms → Bacteria → Acidobacteria	1163	Open in IMG/M
3300005834\|Ga0068851_10095117	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1574	Open in IMG/M
3300006041\|Ga0075023_100017062	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1967	Open in IMG/M
3300006050\|Ga0075028_100922143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300006173\|Ga0070716_100481739	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300006176\|Ga0070765_101576703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300006237\|Ga0097621_102176415	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	530	Open in IMG/M
3300006852\|Ga0075433_11338720	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	620	Open in IMG/M
3300006904\|Ga0075424_100429805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1409	Open in IMG/M
3300009545\|Ga0105237_10257288	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1748	Open in IMG/M
3300009545\|Ga0105237_11877457	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300009551\|Ga0105238_10905483	All Organisms → cellular organisms → Bacteria → Acidobacteria	901	Open in IMG/M
3300009839\|Ga0116223_10430333	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	774	Open in IMG/M
3300010371\|Ga0134125_11276015	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300010375\|Ga0105239_12091486	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300010379\|Ga0136449_100197470	All Organisms → cellular organisms → Bacteria	3835	Open in IMG/M
3300010379\|Ga0136449_100200537	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3797	Open in IMG/M
3300010379\|Ga0136449_101940686	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	873	Open in IMG/M
3300010379\|Ga0136449_102563513	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300010399\|Ga0134127_12178696	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300010403\|Ga0134123_12423552	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300011120\|Ga0150983_10020062	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757	Open in IMG/M
3300011269\|Ga0137392_11102595	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300011271\|Ga0137393_11009053	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709	Open in IMG/M
3300012096\|Ga0137389_10279899	All Organisms → cellular organisms → Bacteria → Acidobacteria	1408	Open in IMG/M
3300012189\|Ga0137388_10594686	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1029	Open in IMG/M
3300012202\|Ga0137363_10316901	Not Available	1284	Open in IMG/M
3300012205\|Ga0137362_10074892	Not Available	2810	Open in IMG/M
3300012361\|Ga0137360_10111803	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2110	Open in IMG/M
3300012929\|Ga0137404_10199077	Not Available	1696	Open in IMG/M
3300012955\|Ga0164298_10188706	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1195	Open in IMG/M
3300012957\|Ga0164303_10184078	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1141	Open in IMG/M
3300012984\|Ga0164309_11552708	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300012988\|Ga0164306_10936475	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709	Open in IMG/M
3300012989\|Ga0164305_10943917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300013308\|Ga0157375_10124049	All Organisms → cellular organisms → Bacteria	2696	Open in IMG/M
3300014491\|Ga0182014_10126172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1485	Open in IMG/M
3300014502\|Ga0182021_10938953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1040	Open in IMG/M
3300014838\|Ga0182030_10066567	All Organisms → cellular organisms → Bacteria	5418	Open in IMG/M
3300015241\|Ga0137418_11296851	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300015371\|Ga0132258_10508007	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3015	Open in IMG/M
3300015371\|Ga0132258_11207959	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1911	Open in IMG/M
3300015372\|Ga0132256_100007440	All Organisms → cellular organisms → Bacteria → Acidobacteria	9404	Open in IMG/M
3300017823\|Ga0187818_10021373	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8	2771	Open in IMG/M
3300017936\|Ga0187821_10313097	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300017995\|Ga0187816_10003278	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5429	Open in IMG/M
3300018007\|Ga0187805_10318305	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	716	Open in IMG/M
3300018054\|Ga0184621_10370535	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300020004\|Ga0193755_1050759	All Organisms → cellular organisms → Bacteria → Acidobacteria	1355	Open in IMG/M
3300020579\|Ga0210407_10895030	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300020582\|Ga0210395_10560181	All Organisms → cellular organisms → Bacteria → Acidobacteria	859	Open in IMG/M
3300020583\|Ga0210401_10031603	All Organisms → cellular organisms → Bacteria	5041	Open in IMG/M
3300020583\|Ga0210401_10164877	All Organisms → cellular organisms → Bacteria	2068	Open in IMG/M
3300020583\|Ga0210401_10523693	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300021088\|Ga0210404_10046049	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2030	Open in IMG/M
3300021170\|Ga0210400_10846821	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300021171\|Ga0210405_10006998	All Organisms → cellular organisms → Bacteria	9964	Open in IMG/M
3300021171\|Ga0210405_10108055	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2196	Open in IMG/M
3300021178\|Ga0210408_10427644	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1054	Open in IMG/M
3300021403\|Ga0210397_10216126	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1377	Open in IMG/M
3300021404\|Ga0210389_10445806	All Organisms → cellular organisms → Bacteria → Acidobacteria	1018	Open in IMG/M
3300021420\|Ga0210394_10136796	All Organisms → cellular organisms → Bacteria → Acidobacteria	2125	Open in IMG/M
3300021432\|Ga0210384_10125190	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2306	Open in IMG/M
3300021559\|Ga0210409_10003698	All Organisms → cellular organisms → Bacteria	16865	Open in IMG/M
3300021559\|Ga0210409_10098894	All Organisms → cellular organisms → Bacteria	2692	Open in IMG/M
3300021559\|Ga0210409_10140227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2218	Open in IMG/M
3300021559\|Ga0210409_10449280	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1149	Open in IMG/M
3300025903\|Ga0207680_10697853	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300025907\|Ga0207645_10005924	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8810	Open in IMG/M
3300025907\|Ga0207645_10317921	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1038	Open in IMG/M
3300025911\|Ga0207654_10004724	All Organisms → cellular organisms → Bacteria → Acidobacteria	6895	Open in IMG/M
3300025911\|Ga0207654_10308886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1078	Open in IMG/M
3300025912\|Ga0207707_10018987	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5996	Open in IMG/M
3300025912\|Ga0207707_10476290	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300025914\|Ga0207671_10541730	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	928	Open in IMG/M
3300025923\|Ga0207681_10550657	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	949	Open in IMG/M
3300025923\|Ga0207681_11281722	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300025932\|Ga0207690_10213951	All Organisms → cellular organisms → Bacteria	1471	Open in IMG/M
3300025934\|Ga0207686_11486779	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300025981\|Ga0207640_10016225	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4329	Open in IMG/M
3300025986\|Ga0207658_12061101	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300026116\|Ga0207674_10029740	All Organisms → cellular organisms → Bacteria	5749	Open in IMG/M
3300026118\|Ga0207675_101501335	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300027070\|Ga0208365_1040268	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300027889\|Ga0209380_10750236	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300027910\|Ga0209583_10111468	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1069	Open in IMG/M
3300028380\|Ga0268265_10055215	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3017	Open in IMG/M
3300028381\|Ga0268264_10437468	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300028536\|Ga0137415_10226266	All Organisms → cellular organisms → Bacteria	1684	Open in IMG/M
3300028906\|Ga0308309_10169603	All Organisms → cellular organisms → Bacteria	1773	Open in IMG/M
3300031057\|Ga0170834_105843587	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300031231\|Ga0170824_105616176	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693	Open in IMG/M
3300031231\|Ga0170824_127000295	All Organisms → cellular organisms → Bacteria	3328	Open in IMG/M
3300031446\|Ga0170820_17075768	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300031708\|Ga0310686_105853211	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300031716\|Ga0310813_10317636	All Organisms → cellular organisms → Bacteria → Acidobacteria	1318	Open in IMG/M
3300031754\|Ga0307475_10302311	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1284	Open in IMG/M
3300031820\|Ga0307473_10754587	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300032160\|Ga0311301_10346060	All Organisms → cellular organisms → Bacteria → Acidobacteria	2330	Open in IMG/M
3300032160\|Ga0311301_10475047	All Organisms → cellular organisms → Bacteria → Acidobacteria	1868	Open in IMG/M
3300032180\|Ga0307471_100809355	All Organisms → cellular organisms → Bacteria → Acidobacteria	1104	Open in IMG/M
3300032180\|Ga0307471_102592528	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300032180\|Ga0307471_102712142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300032205\|Ga0307472_102699148	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300032421\|Ga0310812_10002821	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5572	Open in IMG/M
3300032770\|Ga0335085_10003791	All Organisms → cellular organisms → Bacteria	25685	Open in IMG/M
3300032828\|Ga0335080_11683394	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300033433\|Ga0326726_10000505	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	36392	Open in IMG/M
3300033433\|Ga0326726_10301563	All Organisms → cellular organisms → Bacteria → Acidobacteria	1503	Open in IMG/M
3300033475\|Ga0310811_10556625	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1173	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.76%
Host-Associated	Host-Associated	28.24%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.65%
Plants	Host-Associated → Plants	28.24%
Aquatic	Environmental → Aquatic	6.11%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.12%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.92%
Freshwater	Environmental → Aquatic → Freshwater	3.05%
Sediment	Environmental → Aquatic → Sediment	3.05%
Peat	Environmental → Terrestrial → Peat	1.53%
Roots	Host-Associated → Plants → Roots	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.56%
Loam	Environmental → Terrestrial → Soil → Loam	13.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.16%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.40%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.63%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.82%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.05%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.29%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.53%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.58%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.05%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.05%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.29%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.53%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.53%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.53%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.63%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.63%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.34%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	5.34%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.58%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.82%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.82%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.05%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.05%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.05%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.05%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.29%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.29%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.29%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.29%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.29%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.29%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.53%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.53%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.53%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.53%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.53%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.76%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1014321201	3300000364	Soil	MTAQVWLNTNLVRLQKAVLCANCEIISEAVNGHCASCGSESLLSLSGVLGMTIESQLPLGIDTGIPADSGDGHRVSSLAAAA*
JGI1027J11758_130464363	3300000789	Soil	MTAQVWLNTNLVRLQKAVLCANCEIISEXVNGHCASCGSESLLSLSGVLGMTIESQLPLGIDTGIPADSGDGHRVSSLAAAA*
JGIcombinedJ51221_101187831	3300003505	Forest Soil	MAAQVWLNTNLVRLHKAVLCANCEVISEGLNGHCAGCGSQSLLRLSTVLGGTIDSKLSVVFAMSAHDVGDDVGVRSLSAAA*
Ga0065712_103136102	3300005290	Miscanthus Rhizosphere	MTDQAWRNANLVRLRKAVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGTIDPDLPFSVAHSTHTSEDVRVCSLAAVA*
Ga0070676_101136301	3300005328	Miscanthus Rhizosphere	MTDQAWRNANLVRLRKAVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGTIDPDLPFSVAHSTHASEDVRVCSLAAVA*
Ga0070690_1002744502	3300005330	Switchgrass Rhizosphere	MSAPIWLNTNLVRLRKAVLCANCEVISEDLNGHCASCGSQSLLSLSRVLGGAIESAVPFGFATSAGAVSDQECVRSLSAACLAA*
Ga0070677_100781772	3300005333	Miscanthus Rhizosphere	MSAPIWLNTNLVRLRKAVLCANCEVISEDLNGHCASCGSQSLLSLSRVLGGTVESAVPVGFAASAGAVSDQECVRSLSAACLAA*
Ga0070677_108685472	3300005333	Miscanthus Rhizosphere	AVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGTIDPDLPFSVAHSTHASEDVRVCSLAAVA*
Ga0068869_1003378861	3300005334	Miscanthus Rhizosphere	MTDQAWRNANLVRLRKAVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGTIDPDLPFSVAHSTH
Ga0070680_1001304602	3300005336	Corn Rhizosphere	MTDQTWRNANLVRLRKAVLCANCEVISEGVNGHCAGCGSQSLLGLSSVLGGTIDPDLPFSVAHSTHANEDVSVCSLAAAA*
Ga0070682_1002673532	3300005337	Corn Rhizosphere	MTDQTWRNANLVRLRKAVLCANCEVISEGVNGHCAGCGSQSLLGLSSVLGGTIDPDLPFSVAHSTHASEDVRVCSLAAVA*
Ga0070705_1001332862	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MTDQTWRNANLVRLRKAVLCANCEVISEGVNGHCAGCGSQSLLGLSSVLGGTIDPDLPFSVAHSTHTSEDVRVCSLAAVA*
Ga0070681_104044263	3300005458	Corn Rhizosphere	MTDQAWRNANLVRLRKAVLCANCELISEGLNGHCEGCGSQSLLGLSSVLGGAIEPELSFSFADSTHASEDVRVCSLAAAA*
Ga0068867_1000894052	3300005459	Miscanthus Rhizosphere	MSAPIWLNTNLVRLRKAVLCANCEVISEDLNGHCASCGSQSLLSLSRVLGGAIESAAPFGFATSAGAVSDQECVRSLSAACLAA*
Ga0068867_1001934522	3300005459	Miscanthus Rhizosphere	MTDQAWRNANLVRLRKAVLCANCEVISEGLNGHCAGCGSQSPLGLSSVLGGTIEPELSFSFTDSTQASEDVRVCSLAAAA*
Ga0070685_104247032	3300005466	Switchgrass Rhizosphere	WRNANLVRLRKAVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGTIDPDLPFSVAHSTHASEDVRVCSLAAVA*
Ga0070706_1010622573	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTDQAWRNANLVRLRKAVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGTIDPDLPFSVAHSTHANEDVSVCSLAAAA*
Ga0070693_1006263961	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MTDQAWRNANLVRLRKAVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGTIEPELSFSFTDSTQASEDVRVCSLAAAA*
Ga0068854_1000232813	3300005578	Corn Rhizosphere	DQAWRNANLVRLRKAVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGTIDPDLPFSVAHSTHASEDVRVCSLAAVA*
Ga0070702_1002697951	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	AWRNANLVRLRKAVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGTIDPDLPFSVAHSTHASEDVRVCSLAAVA*
Ga0068851_100951172	3300005834	Corn Rhizosphere	MTDQAWRNANLIRLRKAVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGTIDPDLPFSVAHSTHASEDVRVCSLAAVA*
Ga0075023_1000170621	3300006041	Watersheds	TAQVRLNTNLVRLQKAVLCANCEVISEGLNGHCAGCGSQSLLSLSRVLGGTIESERSLCFATSAHAVSDDVRVRALSAAA*
Ga0075028_1009221432	3300006050	Watersheds	MSAQVWLCTNLVRLQKAVLCANCEVISEGLNGHCAGCGSQSLLGLSRVLGGTIEPELSCGLATSPHAVRDEDVRVYSLSAAA*
Ga0070716_1004817392	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MAAQVWLNTNLVRLHKAVLCANCEVISEGLNGHCAGCGSQSLLRLSTVLGGTIDSKLPVVFATSAHDASDDVCVRCLSAAA*
Ga0070765_1015767031	3300006176	Soil	AVLCANCEVISEGLNGHCAGCGSQSLLRVSTVLGGTIDSELSVVFATSAHNVSDDVGVRSLSAAA*
Ga0097621_1021764151	3300006237	Miscanthus Rhizosphere	MTAQVRLNTNLVRLEKAVLCANCEVISEGVNGHCASCGGQSLLSLSRVLGGTIEPELSFGFATSTRAINDDVCVYSLSAAA*
Ga0075433_113387201	3300006852	Populus Rhizosphere	MTDQTWRNANLVRLRKAVLCANCEVISEGVNGHCAGCGSQSLLGLSSVLGGTIEPDLPFSVAHSTHANEDVSVCSLAAAA*
Ga0075425_1007953221	3300006854	Populus Rhizosphere	MTDQTWRNANLVRLRKAVLCANCEVISEGVNGHCAGCGSQSLLGLSSVLGGTIDPDLPFSVAHSTHA
Ga0075424_1004298053	3300006904	Populus Rhizosphere	MTDQTWRNANLVRLRKAVLCANCEVISEGVNGHCAGCGSQSLLGLSSVLGGTIDPDLSFSVAHSTHANEDVSVCSLAAAA*
Ga0105237_102572883	3300009545	Corn Rhizosphere	MTDQAWRNANLVRFRKAVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGTIDPDLPFSVAHSTHTSEDVRVCSLAAVA*
Ga0105237_118774571	3300009545	Corn Rhizosphere	MTDQAWRNANLVRLRKAVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGAIDPDLSFSVAHSTHASEDVRVCSLAAAA*
Ga0105238_109054832	3300009551	Corn Rhizosphere	DQAWRNANLVRLRKAVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGTIDPDLPFSVAHSTHASEDVRVCSLAAAA*
Ga0116223_104303331	3300009839	Peatlands Soil	MTANGWLNTNLVRLQKAVLCANCEVISEGLNGHCAGCGSQSLLSLSTVLGGTVESELSFAFATSAPAVSDDGRLCSLSAAA*
Ga0134125_112760151	3300010371	Terrestrial Soil	MTDQAWRNANLVRLRKAVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGTIEPELSLSFADSTQASEDVRVCSLAAAA*
Ga0105239_120914861	3300010375	Corn Rhizosphere	MTDQAWRNANLVRLRKAVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGTIEPELSFTFANSTQASDDGQVCSLAAAA*
Ga0136449_1001974702	3300010379	Peatlands Soil	MTANGWLNTNLVRLQKAVLCANCEVISEGLNGHCASCGSESLLSLSTVLGGTVESELSFAFATSAPAVSDDGRLCSLSAAA*
Ga0136449_1002005372	3300010379	Peatlands Soil	MTAQAWLNTNLVRLQKAVLCANCEVISEGLNGHCAGCGSQSLLSLSTVLGGTVESELSFAFATSAHAVRDDVRVCSLSAAA*
Ga0136449_1019406861	3300010379	Peatlands Soil	MTGAQVWLNTNLVCLQKAVLCANCDIISEGVNGYCAACGSQSLLRLSGLLGGTVESEPPFAFATAAHAVGDEVRVCTLSAAA*
Ga0136449_1025635131	3300010379	Peatlands Soil	MTAKGWLNTNLVRLQKAVLCANCEVISEGLNGHCAGCGSESLLSLSTVLGGTVESELSFAFATSAPAVSDDRRVCSLSAAA*
Ga0134127_121786961	3300010399	Terrestrial Soil	MSAPIWLNTNLVRLRKAVLCANCEVISEDLNGHCASCGSQSLLSLSRVLGGTVESAVPVGFAASAGAVSDQECVRSLSAACL
Ga0134123_124235521	3300010403	Terrestrial Soil	DRGVTNMTDQAWRNANLVRLRKAVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGTIDPDLPFSVAHSTHASEDVRVCSLAAVA*
Ga0150983_100200622	3300011120	Forest Soil	RGATNMAAQVWLNTNLVRLHKAVLCANCEVISEGLNGHCAGCGSQSLLRVSTVLGGTIDSELSVVFATAAHDVSDDVGVRSLSAAA*
Ga0137392_111025951	3300011269	Vadose Zone Soil	RGATNMAAHVWLNTNLVHLQKAVLCANCEVISEGLNGRCAACGSQSLLSLRTVLGGTIEPELSFGFATSPHGVTDDVRVRSLAVAA*
Ga0137393_110090531	3300011271	Vadose Zone Soil	MSAQVWLNTNLVHLQKAVLCANCEVISEGLNGRCAACGSQSLLSLRTVLGGTIEPELSFGFATSPHGVTNDVRVRSLAVAA*
Ga0137389_102798991	3300012096	Vadose Zone Soil	NCEVISEGLNGHCAGCGSESLLSLRTILGEMIEPERSSGLATSQAVSDDMGVRSLSAAA*
Ga0137388_105946862	3300012189	Vadose Zone Soil	MSAQVWLNTNLVHLQQAVLCANCEVISEGLNGRCAACGSQSLLSLRTVLGGTIEPELSFGFATSPHGVTNDVRVRSLAVAA*
Ga0137363_103169012	3300012202	Vadose Zone Soil	MSAQVWLNTNLVHLQKAVLCANCEVISEGLNGRCAACGSQSLLSLRTVLGGAIEPELSFGFATSPHGVTDDVRVRSLAVAA*
Ga0137362_100748922	3300012205	Vadose Zone Soil	MSAQVWLNTNLVHLQKAVLCANCEVISEGLNGRCAACGSQSLLILGTVLGWTIEPELSFGFATSPHGVTDDVRVRSLAVAA*
Ga0137360_101118031	3300012361	Vadose Zone Soil	MAAEIWLNPNLVRLQKALLCANCEVISEGLNGHCAGCGSESLLSLRTILGEMIEPERSSGLATSQAVSDDMGVRSLSAAA*
Ga0137404_101990771	3300012929	Vadose Zone Soil	MSAQVWLNTNLVHLQQAVLCANCEVISEGLNGRCAACGSQSLLSLRTVLGGTIDPELSFGFATSPHGVTDDVRVRSLAVAA*
Ga0164298_101887062	3300012955	Soil	MTDQAWRNANLVRLRKAVLCANCELISEGLNGHCEGCGSQSLLGLSSVLGGTIGPDLSFSVAHSTHANEDVSVCSLAAAA*
Ga0164303_101840781	3300012957	Soil	GVTNMTDQAWRNANLVRLRKAVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGTIDPDLPFSVAHSTHASEDVRVCSLAAVA*
Ga0164309_115527082	3300012984	Soil	MTDQTWRNANLVRLRKAVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGTIDPDLPFSVAHSTHASEDVRVCSLAAVA*
Ga0164306_109364751	3300012988	Soil	ELRHYSCRSIGSSRDRGVTNMTDQAWRNANLVRLRKAVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGTIEPDLPFSVAHSTHASEDVRVCSLAAVA*
Ga0164305_109439172	3300012989	Soil	MTDQAWRNANLVRLRKAVLCANCELISEGLNGHCEGCGSQSLLGLSSVLGGAIEPELSFSFADSTHASEDVRVCSL
Ga0157375_101240492	3300013308	Miscanthus Rhizosphere	MTDQAWRNANLVRLRKAVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGAIDPDLSFSVAHSTHASEDVRVCSLAAVA*
Ga0182014_101261722	3300014491	Bog	MTAQAWLNTNLVRLHKAVLCANCEVISEGLNGHCAGCGSQSLLSLNRVLGGTIESELSFSFATSEHASSDDGRVFSLSAAA*
Ga0182021_109389533	3300014502	Fen	MTAQAWLNTNLVRLHKAVLCANCEVISEGLNGHCAGCGSQSLLSLNRVLGGTVESEPSFAFATPAHDVSDEVRACTLSAAA*
Ga0182030_100665673	3300014838	Bog	MTAQAWLNTNLVRLHKAVLCANCEVISEGLNGHCAGCGSQSLLSLNRVLGGTIESELSFSFATSAHASSDDGRVFSLSAAA*
Ga0137418_112968511	3300015241	Vadose Zone Soil	MSAQVWLNTNLVHLQKAVLCANCEVISEGLNGRCAACGSQSLLSLRTVLGGTIDPELSFGFATSPHGITDDVRVRSLAVA
Ga0132258_105080075	3300015371	Arabidopsis Rhizosphere	MTVQVWLNTNLVRLEKALLCANCEIISEGLNGHCASCGSESLLSLSGVLGATIESRLPLGMDTSVPADSHGSRPVSSLAAAA*
Ga0132258_112079591	3300015371	Arabidopsis Rhizosphere	MTAHVWLNTSLVRLQKAVLCANCEIISEGINGHCASCGSEALFRLSGVLGGMIESQPSFGAAASANVLSSDMRVSSLAAAA*
Ga0132256_1000074409	3300015372	Arabidopsis Rhizosphere	MTDQAWRNANLVRLRKAVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGTIDPDLSFNVAHSTHTSEDVRVCSLAAVA*
Ga0187818_100213732	3300017823	Freshwater Sediment	VTAQVLLKTNQVRLQKAVLCANCEIISEGRNGHCACCGSQSLLSLSRVLGKTIEQELSYGFATSAHAVCDDVCVSSLSAAVTH
Ga0187821_103130972	3300017936	Freshwater Sediment	LYTNLVRLQKAVLCANCEVISEGLNGYCAGCGSQALLCLSRVLGETIEPELSFSFVTPHAVSDKDLRVYCLSAAA
Ga0187816_100032782	3300017995	Freshwater Sediment	VTAQVLLKTNQVRLQKAVLCANCEIISEGRNGHCACCGSQSLLSLSRVLGKTIEQELSYGFATSAHAVCDDVCVSSLSAAVSH
Ga0187805_103183051	3300018007	Freshwater Sediment	VTAQVLLKTNQVRLQKAVLCANCEIISEGRNGHCACCGSQSLLSLSRVLGKTIEQELSYGFATSAHAVCDDVCVSSLSAAVSHYPSFQQIA
Ga0184621_103705351	3300018054	Groundwater Sediment	MTDQAWRNTNLVRLRKAVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGTIEPELSFSFADSTHAGYDARVCSLAAAA
Ga0193755_10507591	3300020004	Soil	MNAQVWLDTNLVRLQKAVLCANCEVISEGLNGHCSACGSQSLLSVSKVLGGTIESKQSVGLAKLAHVVKDDLRVRSLSAAA
Ga0210407_108950302	3300020579	Soil	MAAQVWLNTNLVRLQKAVLCANCEVISEGRNGHCAGCGSQSLLALSRVLGGTIEPELSFGFATSVHAVCDDLCDSSLSAAA
Ga0210395_105601813	3300020582	Soil	MAAQVWLNTNLVRLQKAVLCANCEVISEGRNAHCDCCGSQSLLNLSKVLGGTIEPELTFGFAETEHAVSDDVCVSTLSAAA
Ga0210401_100316034	3300020583	Soil	MAAQVWLNTNLVRLDKAVLCANCEVISEGLNGHCAGCGSQSLLRVSTVLGGTIDSELSVVFATAAHDVSDDVGVRSLSAAA
Ga0210401_101648774	3300020583	Soil	MVAQVWLNTNLVRLQKAVLCANCELISEGPNGHCAGCGSQSLLPLSRILGGAIEPEQSFGFGRSEAALCAEERVSLSAAA
Ga0210401_105236931	3300020583	Soil	MTAQVWLNTNLVRLQKAVLCANCEVISEGLNGHCAGCGSQSLLSLSTVLGGTIEPELAFTFGPSAHAASDDSRVRSLSAAA
Ga0210404_100460492	3300021088	Soil	VAAQVWLNTNLVRLDKAVLCANCEVISEGLNGHCAGCGSQSLLRVSTVLGGTIDSELSVVFATAAHDVSDDVGVRSLSAAA
Ga0210400_108468211	3300021170	Soil	MAAQVWLNTNLVRLQEAVLCANCEVISEGRNGHCAGCGSQSLLNLSRVLGGTIEPELSFGFAETEPAVCDDVCVSTLSAAA
Ga0210405_1000699816	3300021171	Soil	MVAQVWLNTNLVRLQKAVLCANCELISEGPNAHCAGCGSQSLLILSTILGGTIEPELSFGFEASVPAVCDDEHVSVSAAA
Ga0210405_101080554	3300021171	Soil	MAAQVWLNTNLVRLHKAVLCANCEVISEGLNGHCAGCGSQSLLRVSTVLGGTIDSELSVVFATAAHDVSDDVGVRSLSAAA
Ga0210405_102632653	3300021171	Soil	MAAQVWLNTNLVRLQKAVLCANCEVISEGRNAHCDCCGSQSLLNLSKVLGGTIEPELTFGFAETEHA
Ga0210408_104276441	3300021178	Soil	MAAQVWLNTNLVRLHKAVLCANCEVISEGLNGHCAGCGSQSLLRLSTVLGGTIDSKLSVVFAMSAHDVGDDVGVRSLSAAA
Ga0210397_102161262	3300021403	Soil	MAGHVWLNTNLVRLHNAVLCANCEVISEALNGHCASCGSQSLLSLSRVLGGTIDSELSVVFATSANAVSDKVRVRSLSAAA
Ga0210389_104458064	3300021404	Soil	MTAQLWLNTNLVRLQKAVLCANCEVISEGRNAHCDCCGSQSLLNLSKVLGGTIEPELTFGFAETEHAVSDDVCVSTLSAAA
Ga0210394_101367964	3300021420	Soil	MTTQLSLNTNLVRLQKKAVLCANCEVISEGRNGHCACCGSQSLLTLSRVLGGTIDPELSFAFAAPAHVVYDDLCVPLSAAA
Ga0210384_101251902	3300021432	Soil	MTAQVWLNTNLVRLEKAVLCANCEVISEGLNGHCAGCGSQSLLRLSPVLGGTIESELSFGVATSRHAVRDVPLRSLSAAA
Ga0210409_1000369815	3300021559	Soil	AVLCANCEVISEALNGHCASCGSQSLLSLSRVLGGTIDSELSVVFATSANAVSDKVRVRSLSAAA
Ga0210409_100988946	3300021559	Soil	VWLNTNLVRLHKAVLCANCEVISEGLNGHCAGCGSQSLLRLSTVLGGTIDSKLSVVFAMSAHDVGDDVGVRSLSAAA
Ga0210409_101402271	3300021559	Soil	MSARFSLNTNLVRLRKAMLCANCELISEDLNGHCAGCGSESLLDLKKVLGGTIEAEPSVALATSHAVDDVRFRSLAAAA
Ga0210409_104492802	3300021559	Soil	MAAQVWLNTNLVRLHKAVLCANCEVISEGLNGHCAGCGSQSLLRVSTVLGGTIDSELSLVFATSAHDVSDDVGVRSLSAAA
Ga0207680_106978531	3300025903	Switchgrass Rhizosphere	MTDQAWRNANLVRLRKAVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGTIDPDLPFSVAHSTHASEDVRV
Ga0207645_100059241	3300025907	Miscanthus Rhizosphere	MTDQAWRNANLVRLRKAVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGTIDPDLPFSVAHSTHASEDVRVCSLAAVA
Ga0207645_103179212	3300025907	Miscanthus Rhizosphere	MSAPIWLNTNLVRLRKAVLCANCEVISEDLNGHCASCGSQSLLSLSRVLGGAIESAVPFGFATSAGAVSDQECVRSLSAACLAA
Ga0207654_100047242	3300025911	Corn Rhizosphere	MTDQTWRNANLVRLRKAVLCANCEVISEGVNGHCAGCGSQSLLGLSSVLGGTIDPDLPFSVAHSTHANEDVSVCSLAAAA
Ga0207654_103088861	3300025911	Corn Rhizosphere	MTDQAWRNANLVRLRKAVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGTIEPDLPFSVAHSTHTNEDVRVCSLAAVA
Ga0207707_100189877	3300025912	Corn Rhizosphere	MTDQTWRNANLVRLRKAVLCANCEVISEGVNGHCAGCGSQSLLGLSSVLGGTIDPDLPFSVAHSTHANEDVSVCSLGAAA
Ga0207707_104762903	3300025912	Corn Rhizosphere	MTDQAWRNANLVRLRKAVLCANCELISEGLNGHCEGCGSQSLLGLSSVLGGAIEPELSFSFADSTHASEDVRVCSLAAAA
Ga0207671_105417301	3300025914	Corn Rhizosphere	MTDQAWRNANLVRLRKAVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGAIDPDLSFSVAHSTHASEDVRVCSLAAAA
Ga0207681_105506572	3300025923	Switchgrass Rhizosphere	MSAPIWLNTNLVRLRKAVLCANCEVISEDLNGHCASCGSQSLLSLSRVLGGTVESAVPVGFAASAGAVSDQECVRSLSAACLAA
Ga0207681_112817221	3300025923	Switchgrass Rhizosphere	KAVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGTIDPDLPFSVAHSTHASEDVRVCSLAAVA
Ga0207690_102139511	3300025932	Corn Rhizosphere	LRKAVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGTIDPDLPFSVAHSTHASEDVRVCSLAAVA
Ga0207686_114867791	3300025934	Miscanthus Rhizosphere	EGVTNMTDQAWRNANLVRLRKAVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGTIDPDLPFSVAHSTHASEDVRVCSLAAVA
Ga0207640_100162253	3300025981	Corn Rhizosphere	PAATEGVTNMTDQAWRNANLVRLRKAVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGTIDPDLPFSVAHSTHASEDVRVCSLAAVA
Ga0207658_120611012	3300025986	Switchgrass Rhizosphere	KAVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGTIDPDLPFSVAHSTHTSEDVRVCSLAAVA
Ga0207674_100297403	3300026116	Corn Rhizosphere	MTDQTWRNANLVRLRKAVLCANCEVISEGVNGHCAGCGSQSLLGLSSVLGGTIDPDLPFSVAHSTHTSEDVRVCSLAAVA
Ga0207675_1015013351	3300026118	Switchgrass Rhizosphere	RKAVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGTIEPELSFTFANSTQASDDGQVCSLAAAA
Ga0208365_10402681	3300027070	Forest Soil	MAAQVWLNTNLVRLDKAVLCANCEVISEGLNGHCAGCGSQSLLTLSRVLGGTVESELSFAFATSAHAVSDDVRVCSLSAAA
Ga0209380_107502361	3300027889	Soil	MPTPVWLNTNLVHFQKAVLCANCELISEGLNGHCAGCGSQSLLRLSRVLGGTIESELPFAFATSTHAASHDLDLCTLSAAA
Ga0209583_101114681	3300027910	Watersheds	MTAQVWLNTNLVRLQKAALCSNCEVISEGLNGHCAGCGSQSLLSLSRVLGGTIESERSLCFATSAHAVSDDVRVRALSAAA
Ga0268265_100552151	3300028380	Switchgrass Rhizosphere	SVPAATEGVTNMTDQAWRNANLVRLRKAVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGTIDPDLPFSVAHSTHASEDVRVCSLAAVA
Ga0268264_104374682	3300028381	Switchgrass Rhizosphere	MTDQAWRNANLVRLRKAVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGTIDPDLPFSVAHSTHTSEDVRVCSLAAVA
Ga0137415_102262661	3300028536	Vadose Zone Soil	MSAQVWLNTNLVHLQQAVLCANCEVISEGLNGRCAACGSQSLLSLRTVLGGAIEPELSFGFATSPHGVTDDVRVRSLAVAA
Ga0308309_101696033	3300028906	Soil	MAAQVWLNTNLVRLHKAVLCANCEVISEGLNGHCAGCGSQSLLRVSTVLGGTIDSELSVVFATSAHNVSDDVGVRSLSAAA
Ga0170834_1058435872	3300031057	Forest Soil	MAAQVWLNTNLVRLHKAVLCANCEVVSEGLNGHCAGCGSQSLLRLSTVLGGTIDSKLSVVFATSAHDVSDDVGVRSLS
Ga0170824_1056161762	3300031231	Forest Soil	MTAQVRPNTNLVRLQKAVLCANCEVISEGLNGCCASCGGQSLLSLSRVLGGTIEPELSFRFGMSAHPVNDDVCICSLSAAA
Ga0170824_1270002955	3300031231	Forest Soil	MSAPVWLYTNLVRLQKAVLCANCEVISEGLNGHCAGCGSQSLLGLSRVLGGKIKPELSVGATHAAKDEDARVYSLSAAA
Ga0170820_170757682	3300031446	Forest Soil	ANCEVISEGLNGCCASCGGQSLLSLSRVLGGTIEPELSFRFGMSAHPVNDDVCICSLSAA
Ga0310686_1058532111	3300031708	Soil	MAAQVWLNANLVRLQKAVLCANCEVISEGRNGHCAGCGSQSLLALSKVLGGTIEPELSFGFATPAHAVCDDLCV
Ga0310813_103176362	3300031716	Soil	NMTDQAWRNANLVRLRKAVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGTIDPDLPFSVAHSTHASEDVRVCSLAAVA
Ga0307475_103023111	3300031754	Hardwood Forest Soil	AAQVWLNTNLVRLDKAVLCANCEVISEGLNGHCAGCGSQSLLRVSTVLGGTIDSELSVVFATAAHDVSDDVGVRSLSAAA
Ga0307473_107545871	3300031820	Hardwood Forest Soil	MIAQVWLNTNLVRLHKAVLCANCEVISEGLNGHCAGCGSQWLLSLSRILGGTIESELSFAFDTSAHASSDDLRALSAAA
Ga0311301_103460602	3300032160	Peatlands Soil	MTANGWLNTNLVRLQKAVLCANCEVISEGLNGHCASCGSESLLSLSTVLGGTVESELSFAFATSAPAVSDDGRLCSLSAAA
Ga0311301_104750475	3300032160	Peatlands Soil	MTAQAWLNTNLVRLQKAVLCANCEVISEGLNGHCAGCGSQSLLSLSTVLGGTVESELSFAFATSAHAVRDDVRVCSLSAAA
Ga0307471_1008093552	3300032180	Hardwood Forest Soil	MTDQAWRNANLVRLRKAVLCANCEVISEGRNGHCACCGSQSLLNLSKVLGGTIEPELTFGFAETEHAVSDDVGVSTLSAAA
Ga0307471_1025925281	3300032180	Hardwood Forest Soil	AVLCANCEVISEGLNGHCAGCGSQSLLSLSRVLGGTIESELSFAFATSAHASSNDLRALSAAA
Ga0307471_1027121421	3300032180	Hardwood Forest Soil	MAAQVWLNTNLVRLHKAVLCANCEVISEGLNGHCAGCGSQSLLRLSTVLGGTIDSKLPVVFATSAHDASDDVCVRCLSAAA
Ga0307472_1026991481	3300032205	Hardwood Forest Soil	MTAQVWLNTNLVRLEKAVLCANCEVISEDLNGHCAGCGSQSLLRLSPVLGGTIESELSFGVAPSTHAVRDVPLRSLSAAA
Ga0310812_100028212	3300032421	Soil	MTDQAWRNANLVRLRKAVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGTIDPDLSFNVAHSTHTSEDVRVCSLAAVA
Ga0335085_100037919	3300032770	Soil	MTAEVWLDANLVHLQTAVLCANCEVISDGQNGHCAACGGQSLLHLSRILGGTIEPELSVGVAVSGNAVSDEVRVRSLSAAA
Ga0335080_116833941	3300032828	Soil	LLADAVGSAPTRSGERRMSAEVWLDANLVHLQTAVLCANCEVISDGENGHCAGCGGQSLLHLSQILGGTIAPELAAGIAVSADAVRDKQKVRSLSAAA
Ga0326726_100005056	3300033433	Peat Soil	MTAQDRIDTNLVRLQSAVLCANCEVISEGLNGHCAGCGSQSLLSLSRVLGGPIEAELSIGLEAPAVSDVCVYSLSAAA
Ga0326726_103015631	3300033433	Peat Soil	MTAQARIDTNLVRLQSAVLCANCEVISEGLNGHCAGCGSQSLLSLSRVLGGPIEAELSISLETPAVSEVCVYSLSAAA
Ga0310811_105566251	3300033475	Soil	MTDQAWRNANLVRLRKAVLCANCEVISEGLNGHCAGCGSQSLLGLSSVLGGTIDPDLSFSVAHSTHASEDVRVCSLAAAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F062104

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences