Metagenome / Metatranscriptome Family F062109

Basic Information
Family ID	F062109
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	73 residues
Representative Sequence	VTTDDDDPVAVTYADPRGGTRTVRHAALASVELTVRRPGHGGLTLSSRRGAYEYGTREPMPGITPRPLPEG
Number of Associated Samples	114
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	7.63 %
% of genes near scaffold ends (potentially truncated)	73.28 %
% of genes from short scaffolds (< 2000 bps)	83.21 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Most Common Taxonomy
Group	Bacteria (71.756 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (12.977 % of family members)
Environment Ontology (ENVO)	Unclassified (22.137 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.038 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 27.27% Coil/Unstructured: 72.73%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF01594	AI-2E_transport	12.21
PF00196	GerE	5.34
PF16653	Sacchrp_dh_C	5.34
PF01593	Amino_oxidase	4.58
PF00753	Lactamase_B	4.58
PF00581	Rhodanese	3.05
PF01179	Cu_amine_oxid	3.05
PF12706	Lactamase_B_2	2.29
PF04978	DUF664	1.53
PF00248	Aldo_ket_red	1.53
PF08734	GYD	1.53
PF08281	Sigma70_r4_2	1.53
PF13302	Acetyltransf_3	1.53
PF13561	adh_short_C2	0.76
PF02065	Melibiase	0.76
PF00583	Acetyltransf_1	0.76
PF04075	F420H2_quin_red	0.76
PF16124	RecQ_Zn_bind	0.76
PF01494	FAD_binding_3	0.76
PF03435	Sacchrp_dh_NADP	0.76
PF00589	Phage_integrase	0.76
PF09261	Alpha-mann_mid	0.76
PF01850	PIN	0.76
PF13398	Peptidase_M50B	0.76
PF00144	Beta-lactamase	0.76
PF02776	TPP_enzyme_N	0.76
PF01074	Glyco_hydro_38N	0.76
PF01904	DUF72	0.76
PF13413	HTH_25	0.76
PF11774	Lsr2	0.76
PF06197	DUF998	0.76
PF07690	MFS_1	0.76
PF03061	4HBT	0.76
PF12710	HAD	0.76
PF00733	Asn_synthase	0.76
PF02515	CoA_transf_3	0.76
PF03734	YkuD	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	12.21
COG3733	Cu2+-containing amine oxidase	Secondary metabolites biosynthesis, transport and catabolism [Q]	3.05
COG0383	Alpha-mannosidase	Carbohydrate transport and metabolism [G]	1.53
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.53
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	1.53
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.76
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.76
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.76
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.76
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.76
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.76
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.76
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.76
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.76
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.76
COG3345	Alpha-galactosidase	Carbohydrate transport and metabolism [G]	0.76
COG3371	Uncharacterized membrane protein	Function unknown [S]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.76 %
Unclassified	root	N/A	28.24 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.76 %
Unclassified	root	N/A	28.24 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.76 %
Unclassified	root	N/A	28.24 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	56.49 %
Unclassified	root	N/A	28.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.53 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.76 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	54.96 %
Unclassified	root	N/A	28.24 %
Candidatus Dormibacteraeota	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota	0.76 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.76 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.76 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.76 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.76 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	38.93 %
Unclassified	root	N/A	28.24 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	1.53 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.76 %
Candidatus Dormibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → Candidatus Dormibacter	0.76 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.24 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	10.69 %
Kineosporiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales	3.05 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	3.05 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	1.53 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.53 %
unclassified Candidatus Dormibacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → Candidatus Dormibacter → unclassified Candidatus Dormibacter	0.76 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.76 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.76 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.76 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.76 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.76 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.76 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.76 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.24 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.69 %
Kineosporiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae	3.05 %
Iamiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae	1.53 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.53 %
Nannocystineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae	0.76 %
Candidatus Dormibacter sp. RRmetagenome_bin12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → Candidatus Dormibacter → unclassified Candidatus Dormibacter → Candidatus Dormibacter sp. RRmetagenome_bin12	0.76 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.76 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.76 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.76 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.76 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.76 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.76 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.76 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.76 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.24 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.69 %
Kineosporia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineosporia	3.05 %
Aquihabitans	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans	1.53 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.53 %
Microcella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microcella	0.76 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.76 %
Nannocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Nannocystaceae	0.76 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.76 %
Thermomonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora	0.76 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.76 %
Candidatus Dormibacter sp. RRmetagenome_bin12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → Candidatus Dormibacter → unclassified Candidatus Dormibacter → Candidatus Dormibacter sp. RRmetagenome_bin12	0.76 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.76 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.76 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.76 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.24 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.69 %
Kineosporia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineosporia	3.05 %
unclassified Aquihabitans	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans	1.53 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.53 %
Microcella alkaliphila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microcella → Microcella alkaliphila	0.76 %
unclassified Micromonospora	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora	0.76 %
Nannocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Nannocystaceae → Nannocystis	0.76 %
Thermomonospora echinospora	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora → Thermomonospora echinospora	0.76 %
Mycobacterium avium complex (MAC)	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium avium complex (MAC)	0.76 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.76 %
Candidatus Dormibacter sp. RRmetagenome_bin12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → Candidatus Dormibacter → unclassified Candidatus Dormibacter → Candidatus Dormibacter sp. RRmetagenome_bin12	0.76 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.76 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.76 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.76 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.24 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.69 %
Kineosporia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineosporia	3.05 %
Aquihabitans sp. G128	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. G128	1.53 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.53 %
Micromonospora sp. HB375	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. HB375	0.76 %
Nannocystis exedens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Nannocystaceae → Nannocystis → Nannocystis exedens	0.76 %
Mycobacterium avium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium avium complex (MAC) → Mycobacterium avium	0.76 %
Microcella alkaliphila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microcella → Microcella alkaliphila	0.76 %
Thermomonospora echinospora	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora → Thermomonospora echinospora	0.76 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.76 %
Candidatus Dormibacter sp. RRmetagenome_bin12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → Candidatus Dormibacter → unclassified Candidatus Dormibacter → Candidatus Dormibacter sp. RRmetagenome_bin12	0.76 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.76 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.76 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.76 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.24 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.69 %
Kineosporia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineosporia	3.05 %
Aquihabitans sp. G128	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. G128	1.53 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.53 %
Mycobacterium avium subsp. avium	subspecies	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium avium complex (MAC) → Mycobacterium avium → Mycobacterium avium subsp. avium	0.76 %
Micromonospora sp. HB375	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. HB375	0.76 %
Nannocystis exedens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Nannocystaceae → Nannocystis → Nannocystis exedens	0.76 %
Microcella alkaliphila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microcella → Microcella alkaliphila	0.76 %
Thermomonospora echinospora	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora → Thermomonospora echinospora	0.76 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.76 %
Candidatus Dormibacter sp. RRmetagenome_bin12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → Candidatus Dormibacter → unclassified Candidatus Dormibacter → Candidatus Dormibacter sp. RRmetagenome_bin12	0.76 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.76 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.76 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.76 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.24 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.69 %
Kineosporia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineosporia	3.05 %
Aquihabitans sp. G128	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. G128	1.53 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.53 %
Mycobacterium avium subsp. avium 11-4751	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium avium complex (MAC) → Mycobacterium avium → Mycobacterium avium subsp. avium → Mycobacterium avium subsp. avium 11-4751	0.76 %
Micromonospora sp. HB375	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. HB375	0.76 %
Nannocystis exedens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Nannocystaceae → Nannocystis → Nannocystis exedens	0.76 %
Microcella alkaliphila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microcella → Microcella alkaliphila	0.76 %
Thermomonospora echinospora	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora → Thermomonospora echinospora	0.76 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.76 %
Candidatus Dormibacter sp. RRmetagenome_bin12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → Candidatus Dormibacter → unclassified Candidatus Dormibacter → Candidatus Dormibacter sp. RRmetagenome_bin12	0.76 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.76 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.76 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.76 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.76 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459012\|GOYVCMS01BZFV9	Not Available	519	Open in IMG/M
2170459024\|GZRSKLJ01CXM4A	Not Available	514	Open in IMG/M
3300000956\|JGI10216J12902_113413551	Not Available	588	Open in IMG/M
3300002568\|C688J35102_120974259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4016	Open in IMG/M
3300004092\|Ga0062389_103138407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	618	Open in IMG/M
3300005174\|Ga0066680_10604595	Not Available	686	Open in IMG/M
3300005184\|Ga0066671_10146287	Not Available	1372	Open in IMG/M
3300005332\|Ga0066388_100660670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1658	Open in IMG/M
3300005338\|Ga0068868_100072206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2753	Open in IMG/M
3300005344\|Ga0070661_100029952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3931	Open in IMG/M
3300005347\|Ga0070668_101188094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	691	Open in IMG/M
3300005363\|Ga0008090_15630580	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300005435\|Ga0070714_100032253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4371	Open in IMG/M
3300005435\|Ga0070714_102180741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. G128	539	Open in IMG/M
3300005436\|Ga0070713_100475626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium avium complex (MAC) → Mycobacterium avium → Mycobacterium avium subsp. avium → Mycobacterium avium subsp. avium 11-4751	1176	Open in IMG/M
3300005437\|Ga0070710_11264426	Not Available	548	Open in IMG/M
3300005439\|Ga0070711_100387365	Not Available	1132	Open in IMG/M
3300005445\|Ga0070708_100005589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	9966	Open in IMG/M
3300005456\|Ga0070678_101381199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. G128	657	Open in IMG/M
3300005458\|Ga0070681_10072064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3418	Open in IMG/M
3300005458\|Ga0070681_12006637	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300005459\|Ga0068867_100496127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1049	Open in IMG/M
3300005467\|Ga0070706_100375604	All Organisms → cellular organisms → Bacteria	1324	Open in IMG/M
3300005546\|Ga0070696_100188315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1535	Open in IMG/M
3300005564\|Ga0070664_100261431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1557	Open in IMG/M
3300005564\|Ga0070664_100581639	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300005591\|Ga0070761_11069836	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Nannocystaceae → Nannocystis → Nannocystis exedens	513	Open in IMG/M
3300005602\|Ga0070762_10464559	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300005610\|Ga0070763_10749219	Not Available	575	Open in IMG/M
3300005900\|Ga0075272_1081994	All Organisms → cellular organisms → Bacteria → Proteobacteria	610	Open in IMG/M
3300006028\|Ga0070717_11487186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	614	Open in IMG/M
3300006047\|Ga0075024_100715430	Not Available	551	Open in IMG/M
3300006173\|Ga0070716_100369953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1021	Open in IMG/M
3300006175\|Ga0070712_100130261	All Organisms → cellular organisms → Bacteria	1905	Open in IMG/M
3300006755\|Ga0079222_12466663	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300009093\|Ga0105240_10549525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1278	Open in IMG/M
3300009525\|Ga0116220_10001269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10049	Open in IMG/M
3300009553\|Ga0105249_11570937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	730	Open in IMG/M
3300009683\|Ga0116224_10023057	All Organisms → cellular organisms → Bacteria	3064	Open in IMG/M
3300009683\|Ga0116224_10052869	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1982	Open in IMG/M
3300009698\|Ga0116216_10162204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1374	Open in IMG/M
3300009698\|Ga0116216_10745787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300009700\|Ga0116217_10574426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	704	Open in IMG/M
3300009792\|Ga0126374_10070539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1867	Open in IMG/M
3300010359\|Ga0126376_12150125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	602	Open in IMG/M
3300010379\|Ga0136449_100487292	Not Available	2147	Open in IMG/M
3300010379\|Ga0136449_102142447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	818	Open in IMG/M
3300010876\|Ga0126361_11258789	All Organisms → cellular organisms → Bacteria	1400	Open in IMG/M
3300010880\|Ga0126350_10459719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1128	Open in IMG/M
3300010880\|Ga0126350_12153736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2182	Open in IMG/M
3300011119\|Ga0105246_12370376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	520	Open in IMG/M
3300012211\|Ga0137377_10125989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2445	Open in IMG/M
3300012357\|Ga0137384_11234444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	593	Open in IMG/M
3300012363\|Ga0137390_11411507	Not Available	640	Open in IMG/M
3300012930\|Ga0137407_11930045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	563	Open in IMG/M
3300012960\|Ga0164301_11565064	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300013306\|Ga0163162_12411878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	605	Open in IMG/M
3300014497\|Ga0182008_10749762	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300014654\|Ga0181525_10814689	Not Available	527	Open in IMG/M
3300016341\|Ga0182035_11371693	Not Available	634	Open in IMG/M
3300017792\|Ga0163161_10440766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1051	Open in IMG/M
3300017926\|Ga0187807_1003364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	4918	Open in IMG/M
3300017926\|Ga0187807_1045877	Not Available	1353	Open in IMG/M
3300017928\|Ga0187806_1010996	All Organisms → cellular organisms → Bacteria	2539	Open in IMG/M
3300017932\|Ga0187814_10004119	Not Available	5830	Open in IMG/M
3300017933\|Ga0187801_10073853	All Organisms → cellular organisms → Bacteria	1266	Open in IMG/M
3300017933\|Ga0187801_10304763	Not Available	649	Open in IMG/M
3300017942\|Ga0187808_10227057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	833	Open in IMG/M
3300017942\|Ga0187808_10316827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	705	Open in IMG/M
3300017943\|Ga0187819_10349589	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300020580\|Ga0210403_10729996	Not Available	792	Open in IMG/M
3300020581\|Ga0210399_10911214	Not Available	712	Open in IMG/M
3300021088\|Ga0210404_10685847	Not Available	584	Open in IMG/M
3300021178\|Ga0210408_11166730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. HB375	590	Open in IMG/M
3300021181\|Ga0210388_11211022	Not Available	640	Open in IMG/M
3300021374\|Ga0213881_10059855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1620	Open in IMG/M
3300021407\|Ga0210383_10176333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1823	Open in IMG/M
3300021407\|Ga0210383_10903189	Not Available	752	Open in IMG/M
3300021407\|Ga0210383_11156501	Not Available	652	Open in IMG/M
3300021433\|Ga0210391_10208220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1538	Open in IMG/M
3300021477\|Ga0210398_10880080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineosporia	718	Open in IMG/M
3300021478\|Ga0210402_10606590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1014	Open in IMG/M
3300021478\|Ga0210402_10724748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	918	Open in IMG/M
3300022557\|Ga0212123_10781939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300025910\|Ga0207684_10123603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2220	Open in IMG/M
3300025915\|Ga0207693_10004413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11894	Open in IMG/M
3300025916\|Ga0207663_10921861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	699	Open in IMG/M
3300025927\|Ga0207687_10196432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	1574	Open in IMG/M
3300025929\|Ga0207664_10002603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora → Thermomonospora echinospora	11950	Open in IMG/M
3300026067\|Ga0207678_10005092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11783	Open in IMG/M
3300026089\|Ga0207648_10385538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1268	Open in IMG/M
3300026121\|Ga0207683_11762258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	568	Open in IMG/M
3300026217\|Ga0209871_1000006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	63180	Open in IMG/M
3300026295\|Ga0209234_1214775	Not Available	642	Open in IMG/M
3300026551\|Ga0209648_10028852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4847	Open in IMG/M
3300027064\|Ga0208724_1012962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineosporia	809	Open in IMG/M
3300027575\|Ga0209525_1066897	Not Available	867	Open in IMG/M
3300027855\|Ga0209693_10100253	Not Available	1433	Open in IMG/M
3300027857\|Ga0209166_10148170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineosporia	1282	Open in IMG/M
3300027879\|Ga0209169_10241309	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	947	Open in IMG/M
3300027884\|Ga0209275_10143734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineosporia	1259	Open in IMG/M
3300027889\|Ga0209380_10821145	Not Available	526	Open in IMG/M
3300028759\|Ga0302224_10428259	Not Available	538	Open in IMG/M
3300028780\|Ga0302225_10328032	Not Available	724	Open in IMG/M
3300028808\|Ga0302228_10062492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1778	Open in IMG/M
3300028877\|Ga0302235_10003137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11722	Open in IMG/M
3300029943\|Ga0311340_10106758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3063	Open in IMG/M
3300029943\|Ga0311340_11550063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300029999\|Ga0311339_10494174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microcella → Microcella alkaliphila	1246	Open in IMG/M
3300030520\|Ga0311372_10646510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1495	Open in IMG/M
3300031234\|Ga0302325_12310608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → Candidatus Dormibacter → unclassified Candidatus Dormibacter → Candidatus Dormibacter sp. RRmetagenome_bin12	649	Open in IMG/M
3300031708\|Ga0310686_111953357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300031708\|Ga0310686_115167042	Not Available	622	Open in IMG/M
3300031715\|Ga0307476_10273399	Not Available	1236	Open in IMG/M
3300031740\|Ga0307468_100126768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1585	Open in IMG/M
3300031751\|Ga0318494_10454420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	745	Open in IMG/M
3300031751\|Ga0318494_10554153	Not Available	671	Open in IMG/M
3300031805\|Ga0318497_10199684	Not Available	1104	Open in IMG/M
3300031910\|Ga0306923_12035381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	582	Open in IMG/M
3300031954\|Ga0306926_12014902	Not Available	649	Open in IMG/M
3300032010\|Ga0318569_10183704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	968	Open in IMG/M
3300032074\|Ga0308173_11849688	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300032094\|Ga0318540_10523524	Not Available	572	Open in IMG/M
3300032160\|Ga0311301_11236528	Not Available	952	Open in IMG/M
3300032205\|Ga0307472_100798267	Not Available	862	Open in IMG/M
3300032805\|Ga0335078_11415312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	784	Open in IMG/M
3300032805\|Ga0335078_12316286	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300032896\|Ga0335075_11405153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	588	Open in IMG/M
3300032898\|Ga0335072_10339459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1653	Open in IMG/M
3300033158\|Ga0335077_10498612	Not Available	1288	Open in IMG/M
3300034163\|Ga0370515_0142820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1027	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.02%
Host-Associated	Host-Associated	12.98%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.10%
Plants	Host-Associated → Plants	12.98%
Aquatic	Environmental → Aquatic	9.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.47%
Freshwater	Environmental → Aquatic → Freshwater	8.40%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.63%
Peat	Environmental → Terrestrial → Peat	6.87%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.34%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.76%
Sediment	Environmental → Aquatic → Sediment	0.76%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.98%
Loam	Environmental → Terrestrial → Soil → Loam	21.37%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.40%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.87%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.11%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.82%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.53%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.63%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.87%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.34%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.58%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.82%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.53%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.76%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.76%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.76%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.76%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.76%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.76%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.16%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.87%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.87%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.87%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.34%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.05%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.29%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.29%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.29%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	2.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.53%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.53%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.53%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.76%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.76%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.76%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.76%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.76%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.76%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.76%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.76%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.76%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.76%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.76%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.76%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459012	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO1O1 lysis Rhizosphere grass	Environmental	Open in IMG/M
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005900	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_404	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026217	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027064	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF003 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062109

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N56_05091330	2170459012	Grass Soil	DDRVAVAYADPRGGTRTVTHAALASVELIVQRPGNRELTLTCSRAAYEYGARQPVPGIVPESLPQG
FD1_04516620	2170459024	Grass Soil	VALAEDDRVAVAYADPRGGTRTVTHAALASVELIMQRPGNRELTLTSSRAAYEYGARQPVPRIVPESLPEG
JGI10216J12902_1134135511	3300000956	Soil	LTAGVPAPRARLQLSVTTADDATVAVAYTDPRGGTRTVRHTALASIELTLHRPGDRELTLASGRGAYEYGTRQGIPGIVPQPLPEG*
C688J35102_1209742597	3300002568	Soil	SPGARLLLSVTTEDADAVAVTYADPQGGNRTVRHAALAAVTLTLRRPGRPDVTLSSRHGAYEYGSAQPMPGIVPRALPAG*
Ga0062389_1031384071	3300004092	Bog Forest Soil	PERLTADVSSPGARLRLSVTTGNDDSVTVAYTDPGGGTRTVRHAAMASVELTLLRPGNRELTLSSSRGAYEYGTSQGIPGIVPQPLPEG*
Ga0066680_106045951	3300005174	Soil	VPGPQARVQVSVTTDDDDPVAVTYTDPRGGTRAVRHAALATVELTVRRPGQGGLALSSRRGAYEYGTREPMPGITPRPLPEG*
Ga0066671_101462871	3300005184	Soil	DDPVAVTYTDPRGGTRAVRHAALAIVELTVRRPGRGGLTLSSRRGAYEYGTREPMPRITPRPLPEG*
Ga0066388_1006606702	3300005332	Tropical Forest Soil	QLLVTTDDDDPVAVTYADPRGGTRTVRHAALASVELTVRRPGHGGLTLSSRRGAYEYGTREPMPGITPRPLPEG*
Ga0068868_1000722064	3300005338	Miscanthus Rhizosphere	VITDDDDPVAVTYTDPGGGTRTVRHAALASVELTVRRPGHGGLTLSSRRGAYEYGTREPMPGITPRPLPES*
Ga0070661_1000299525	3300005344	Corn Rhizosphere	VTYADTRGGTRTVRHAALASVELTVRRPGHGGLTLSSRRGAYEYGTREPVPGVTPRPLPEG*
Ga0070668_1011880941	3300005347	Switchgrass Rhizosphere	VTTDDDDPVAVTHADPRGGTRTVRHAALASVELTVRRSGHGGLTLSSRRGAYEYGTREPVPGVTPRPLPEG*
Ga0008090_156305801	3300005363	Tropical Rainforest Soil	APRARLHLSVTTAEDAAVAVAYADPRGGTRAVRHAALASFELTVHHPGDRELTLSSGRGAYEYGTRQGIPGIVPQPLPEG*
Ga0070714_1000322532	3300005435	Agricultural Soil	VALAEDDRVAVADADPRGGTRTVTHAALASVELIMQRPGNRELTLTSSRAAYEYGARRPVPGIVPESLPEG*
Ga0070714_1021807412	3300005435	Agricultural Soil	VAVTYTDPRGGTRTVRHAALATVELTVRRPGQGGLALSSRRGAYEYGTREPMPGITPRPLPEG*
Ga0070713_1004756261	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	PRGETRTVTHAALASVELIMQRPGDRKLTLSSSHAAYEYGARQPMPGIVPRSLPEG*
Ga0070710_112644261	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LLSVTTEDADPVAVTYADPRGGTRTVRHAALASVTLSLRRPGHPELTLSSRRGAYEYGTAQPMPGIEPRPLPAG*
Ga0070711_1003873651	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VTLAEDDRAAVAYADPRGETRTVTHAALASLELTMRRPGNRELTLSSTHAAYEYGAREPIPGIVPLSLPEG*
Ga0070708_1000055893	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VTTGDHDPVAVAYTDPRGGTRTVSHAALARVELILHRPGHRDLTLSSSRGAYEYGTRQDMPAIVPQPLPEG*
Ga0070678_1013811992	3300005456	Miscanthus Rhizosphere	SVTTDDDDPVAVTYTDPRGGTRTVRHAALATVELTVRRPGQGALTLSSRRGAYEFGTREPMPGITPRPLPEG*
Ga0070681_100720645	3300005458	Corn Rhizosphere	RLQLFVTTDDDDPVAVTYADPRGGTRTVRHAALASVELTVRRPGHGGLTLSSRRGAYEYGTREPVPGVTPRPLPEG*
Ga0070681_120066372	3300005458	Corn Rhizosphere	PRVRLLLSVTTDDSNPVAVTYADPRGGTRTVRHAALAGVTLSLRRPGHPELTLSSRRGAYEYGTAQPMPGIEPQPLPEG*
Ga0068867_1004961272	3300005459	Miscanthus Rhizosphere	LQLVVITDDDDPVAVTYTDPGGGTRTVRHAALASVELTVRRPGHGGLTLSSRRGAYEYGTREPMPGITPRPLPES*
Ga0070706_1003756043	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VTTGDHDPVAVAYTDPRGGTRTVSHAALAWVELILHRPGHRDLTLSSSRGAYEYGTRQDMPAIVPQPLPEG*
Ga0070696_1001883152	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	SVPSPQARIQLVVTTDDDDRVAVTYADTRGGTRTVRHAALASVELTVRRPGHGGLTLSSRRGAYEYGTREPVPGVTPRPLPEG*
Ga0070664_1002614312	3300005564	Corn Rhizosphere	TYADTRGGTRTVRHAALASVELTVRRPGHGGLTLSSRRGAYEYGTREPVPGVTPRPLPEG
Ga0070664_1005816392	3300005564	Corn Rhizosphere	DRLTASIGGPRVRLLLSVTTDDSDPVAVTYADPRGGTRTVRHAALAGVTLSLRRPGHPELTLSSRRGAYEYGTAQPMPGIEPRPLPEG*
Ga0070761_110698361	3300005591	Soil	AAVAVAYTDPRGGTRAVRHAALASVELTLHRPGDRELTLSSSRGAYEYGTIPGMPGIVPQPLPEG*
Ga0070762_104645592	3300005602	Soil	GHLAADVYAPGTRLRLSVALAEDDRVAVAYADPRGETRTVTHAALASVELIMQRPGNRELTLTSSRAAYEYGARQPVPGIVPESLPEG*
Ga0070763_107492192	3300005610	Soil	VTYADPPGGTRVVRHAALASVELTWHRRGDRELTTSSSRAAYEYGTRQGMPGIVPQPLPEG*
Ga0075272_10819942	3300005900	Rice Paddy Soil	SLRVTAHDEDAVAVAYADPPGGTRAVSHAALAAVELTLRRRGHEITMSSTRGAYEYGARQGSDPIVPQSLPEG*
Ga0070717_114871862	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VTTDDDDPVAVTYADPRGGTRTVRHAALASVELTVRRPGHGGLTLSSRRGAYEYGTREPVPGVTPRPLPEG*
Ga0075024_1007154302	3300006047	Watersheds	LQLSVTTADEDAVAVPYADPSGGSRAVRHAALATVELKLRRRGDRERILTSSRGAYEYGTSQEMRGIVLEPLPEG*
Ga0070716_1003699531	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VTTADDDAVAVPYADPRGGTRAVRHAALAQVELTVYREGEHEVTLSTSRGAYEYGTSQGLPGIELEPLPAG*
Ga0070712_1001302613	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VALAEDDRVAVADADPRGGTRTVTHAALASVELIMQRPGSRELTLTSSRAAYEYGARQPAPGLVPESLPEG*
Ga0079222_124666632	3300006755	Agricultural Soil	LSVTTDDSNPVAVTYADPRGGTRTVRHAALADVTLSLRRPGHPELTLSSRRGAYEYGTAQPMPGIEPRPLPEG*
Ga0105240_105495252	3300009093	Corn Rhizosphere	VITDDDDPVAVTYTDPGSGTRTATHAALASVELTVRRPAHGGLTLSSRRGAYEYGTREPMPGITPRPLPES*
Ga0116220_100012691	3300009525	Peatlands Soil	DDDDPVAVTYTDPRGGIRTVRHAALASVELILHRPGNRELALSSRGAYEYGTRQGMPGIEPQPLPEG*
Ga0105249_115709372	3300009553	Switchgrass Rhizosphere	VITDDDDPVAVTYTDPGGGTRTVRHAALASVELTVRRPGHGGLTLSSRRGAYEYGTREPMPGITPRPLPEG*
Ga0116224_100230576	3300009683	Peatlands Soil	AYADPPGGTRVVRHAALAAVELTWHHRGDSELTMSSSCGAYEYGTRQGMRGIVPQPLPEG
Ga0116224_100528691	3300009683	Peatlands Soil	VLARLQLSVTTDDDDPVAVPYTDPRGGTRTVSHAALASVEVIVRRPGDREVTLSTNRGAYEYGTRQDMAGIVPQPLPEG*
Ga0116216_101622042	3300009698	Peatlands Soil	VTADDDDPVTVVYTDPGGGTRTVRHAALARVELALRRPGHPELTLSTTGGAYEYGTSQPTPGIVPQPLPEG*
Ga0116216_107457871	3300009698	Peatlands Soil	VAVAYADPPGGTRVVRHAALAAVELTWHHRGDSELTMSSSCGAYEYGTRQGMRGIVPQPLPEG*
Ga0116217_105744262	3300009700	Peatlands Soil	PSPHARLQLSVTTDDDDPVAVPYTDPRGGTRTISHAALASVEVIVRRPGDRELTLSTSRGAYEYGTRQDMPGIVPQPLPEG*
Ga0126374_100705392	3300009792	Tropical Forest Soil	VTTDDDDPVAVTYADPRGGTRTVRHAALASVELTVRRPGHGGLTLSSRRGAYEYGTREPMPGITPRPLPEG*
Ga0126376_121501252	3300010359	Tropical Forest Soil	LTAVVPGPRTRARISVTTADDDAVAVPYADPQGGTRSVRHAALAQVELTVHRPGEHEVTLSTSHGAYEYGTSQGLPGIELEPLPAG*
Ga0136449_1004872922	3300010379	Peatlands Soil	VTADDDDPVTVVYTDPGGGTRTVRHAALPRVELALRRPGHPELTLSTTGGAYEYGTSQPTPGIVPQPLPEG*
Ga0136449_1021424472	3300010379	Peatlands Soil	AYADPRGEARTVTHAALASTELIMQRPGNRELTLSSSHAAYEYGARQPMPGIVPRSLPEG
Ga0126361_112587892	3300010876	Boreal Forest Soil	VVVTYADPRGGTRVVRHAALASVELTWHRRGDRELTMSSGRAAYEYGTRQGMPGIVPQPLPEG*
Ga0126350_104597191	3300010880	Boreal Forest Soil	VTTGDDDPVAVTYTDPHGGTRTVRHAARAGVELILHRPGRPELALSSRGAYEYGTRQGMPGVEPQPLPEG*
Ga0126350_121537365	3300010880	Boreal Forest Soil	IPAPHARLQLAVTTDDDDPVAVTYTDPRGGTRTVRHAARAAVELTLRRPGQRELTLTGGRGAYEFGTSHGMPGIVPQPLPEG*
Ga0105246_123703761	3300011119	Miscanthus Rhizosphere	RLQLSVTSDDDDPVAVTYTDPRGGTRTVRHAALASVELTLRRPGHRELTLSSNRGAYEYGTSQGMPGIVPQSLPEG*
Ga0137377_101259891	3300012211	Vadose Zone Soil	LTASVPSPQARLQLSVTTDDADPVAVTYTDPGGGTRTVRHAALATVELTVRRPGQGGLTLSSRRGAYEYGTREPMPGITPRPLPEG*
Ga0137384_112344441	3300012357	Vadose Zone Soil	PRGGTRTVRHAALASVEVVVRRPGDHELILSSSHGAYEYGTRQDMPQIVPQPLPEG*
Ga0137390_114115071	3300012363	Vadose Zone Soil	DPSGGTRAVRHAARAAIELTAHGRRGRELTLSGGCGAYEYGTRHDRQGIVPQPLPEG*
Ga0137407_119300452	3300012930	Vadose Zone Soil	VTTDDDDPAAVTYTDPRGGTRTVRHAALASVELTVRRPGHGGLTLSSRRGAYEYGTREPMPGITPRPLPEG*
Ga0164301_115650641	3300012960	Soil	LLLSVTTDDSDPVAVTYADPRGGTRTVRHAALADVTLSLRRPGHPELTLSSRRGAYEYGTAQPMPGIEPRPLPEG*
Ga0163162_124118782	3300013306	Switchgrass Rhizosphere	VAVTYADTRGGTRTVRHAALASVELTVRRPGHGGLTLSSRRGAYEYGTREPVPGVTPRPLPEG*
Ga0182008_107497621	3300014497	Rhizosphere	RARLLLSVTTEDADPVAVTYADPRGGTRTVRHAALAGVTLSLRRPGRPEVTLSSRRGAYEYGARPPVPGIEPRPLPAG*
Ga0181525_108146891	3300014654	Bog	PGRLTASIPSPRAQLQLSVTTDDDAAVAVAYTDPRGGTRTVRHAALASVELTLHRPGDRELTLSSSRGAYEYGTRHDMPGIVPQPLPEG*
Ga0182035_113716932	3300016341	Soil	TTDDDTSVAVAYADPRGGSRTVRHAALARVELTVRRPANPELTLSSSRGAYEYGTRQPMPGIVPQPLPEG
Ga0163161_104407662	3300017792	Switchgrass Rhizosphere	LQLVVITDDDDPVAVTYTDPRGGTRTVRHAALASVELTVRRPGHGGLTLSSRRGAYEYGTREPMPGITPRPLPEG
Ga0187807_10033644	3300017926	Freshwater Sediment	VTTEDAHAVVVAYADPQGGMRAVRHATLARVELTLHRRGDRLLTLSSSRGAYEYGTGQPMPGIVPQPLPER
Ga0187807_10458772	3300017926	Freshwater Sediment	VTADDDDPVTVVYTDPGGGTRTVRHAALARVELALRRPGHPELTLSTTGGAYEYGTSQPTPGIVPQPLPEG
Ga0187806_10109962	3300017928	Freshwater Sediment	VTTEDAHAVVVAYADPQGGMRAVRHATLARVELTLHRRGDRLITLSSSRGAYEYGTGQPMPGIVPQPLPER
Ga0187814_100041199	3300017932	Freshwater Sediment	VTTEDAHAVVVAYADPQGGMRAVRHATLARVELTLHRRGDRLLTLSSSRGAYEYGTGQPMPGIVPQPLPAR
Ga0187801_100738531	3300017933	Freshwater Sediment	TAVVPSPGTRLELRVTTEDAHAVVVAYADPQGGMRAVRHATLARVELTLHRRGDRLITLSSSRGAYEYGTGQPMPGIVPQPLPER
Ga0187801_103047631	3300017933	Freshwater Sediment	ADDDRVAVAYADPRGGTRTVTHAALASVELTMQRPGNRELTLTSSHAAYEYGARQPVPGIVPESLPEG
Ga0187808_102270572	3300017942	Freshwater Sediment	EDDRTAVAYADPRGETRTVTHAALASTELIMQRPGNRELTLSSSHAAYEYGARQPMPGIVPRSLPEG
Ga0187808_103168271	3300017942	Freshwater Sediment	YTDPRGGTRTVRHAALASVELTLHRPGDRDLTLSSSRGAYEYGTRQDMPGIVPQPLPEG
Ga0187819_103495892	3300017943	Freshwater Sediment	VTTEDDDAVVVAYADPQGGTRAVRHAALARVELTLHRRGDRLLTLSSSRGAYEYGTGQPMPGIVPQPLPAR
Ga0210403_107299961	3300020580	Soil	QGTRLRLSVTLAEDDRVAVAYADPRGATRTITHAALASMELIMQRPGNRELTLSSSHAAYEYGARPPVPGIVPQSLPEG
Ga0210399_109112142	3300020581	Soil	EDDRVAVAYADPRGGTRTVTHAALASMELIMQRPGNRELTLSSSHAAYEYGARPPVPGIVPQSLPEG
Ga0210404_106858471	3300021088	Soil	DDLVAVTYTDPRGGTRTVRHAALATVELTVRRPGQGGLALSSRRGAYEYGTREPMPGITPRPLPEG
Ga0210408_111667301	3300021178	Soil	PRGGTRTVTHAALASVELIMQRPGNRELTLTSSRAAYEYGARPPVPGIVPESLPEG
Ga0210388_112110222	3300021181	Soil	PGHLAADVYAPGTRLRLSVATAEDDRVAVAYADPRGGTRIVTHAALASVELIMQRPGNRELTLTSSRAAYEYGARPPVPGIVPESLPEG
Ga0213881_100598551	3300021374	Exposed Rock	AGARVRLSVALEQDALVAVTYTDPRGGTRTVTHAALASAELSMRRPGNRELTLSSSRVAYEYGSRQPTPGIVPRSLPEG
Ga0210383_101763333	3300021407	Soil	VTTDDDNPVAVTYTDPRGGTRTVTHAALASVELILHRPGNRELALSSSRGAYEYGARQGIPAIELQPLPED
Ga0210383_109031892	3300021407	Soil	DVYAPGTRLRLSVTPAEDDRVAVAYADPRGGTRTVTHAALASMELIMQRPGNRELSLSSSHAAYEYGARPPVPGIVPQSLPEG
Ga0210383_111565012	3300021407	Soil	AGIPGPHARLQLAVATDDDDPVAVTYTDPRGGTRTVRHAARAVVDLTLRRPGHREVSLTGGRGAYEFGTSHGMPGIVPQPLPEG
Ga0210391_102082201	3300021433	Soil	TVPSSRARLQLQLSVTTDDDDLVAVPYTDPRGGTRTVAHAALAALELTVHRLGRPALTLSSRRGGYEYGASQPVPGLVARTLPEG
Ga0210398_108800801	3300021477	Soil	VTYTDPRGGTRTVRHAARATVELTLRRADQRDLTLTGGRGAYEFGTSHNMPGIVPQPLPE
Ga0210402_106065901	3300021478	Soil	PAQAGSPPTSSPQARLQLSATTAGDKLVTVACTDPRGGIRMVRHAALASVELILRRPGDRELSLSSSRGSHEYGTRQGTPGTVPEPLLEG
Ga0210402_107247482	3300021478	Soil	QLSVTTDDDDPVAVTYTDPRGGTRTVRHAALASVELTLRRPGHRELTLSSNRGAYEYGTSQGMPGIVPQSLPEG
Ga0212123_107819392	3300022557	Iron-Sulfur Acid Spring	VTYTDPRGGTRTVRHAARAAVELTLRRRGQRELTLTGGRGAYEFGTSHMPGIVPQPLPEG
Ga0207684_101236033	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VTTGDHDPVAVAYTDPRGGTRTVSHAALAWVELILHRPGHRDLTLSSSRGAYEYGTRQDMPAIVPQPLPEG
Ga0207693_100044132	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VALAEDDRVAVADADPRGGTRTVTHAALASVELIMQRPGSRELTLTSSRAAYEYGARQPAPGLVPESLPEG
Ga0207663_109218612	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	PRTRARISVTTADDDAVAVPYADPRGGTRAVRHAALAQVELTVYREGEHEVTLSTSRGAYEYGTSQGLPGIELEPLPAG
Ga0207687_101964322	3300025927	Miscanthus Rhizosphere	VITDDDDPVAVTYTDPGGGTRTVRHAALASVELTVRRPGHGGLTLSSRRGAYEYGTREPMPGITPRPLPES
Ga0207664_1000260314	3300025929	Agricultural Soil	GGPRARLLLSVTTEDAGPVAVTYADPRGGTRTVRHAALASVTLSLRRPGHPELTLSSRRGAYEYGTAQPMPGIEPRPLPAG
Ga0207678_100050929	3300026067	Corn Rhizosphere	VTTDDDDPVAVTHADPRGGTRTVRHAALARVELTVRRPGHGGLTLSSRHGAYEYGTREPMPGITPRPLPEG
Ga0207648_103855382	3300026089	Miscanthus Rhizosphere	VITDDDDPVAVTYTDPGGGTRTVRHAALASVELTVRRPGHGGLTLSSRRGAYEYGTREPMPGITPRPLPEG
Ga0207683_117622582	3300026121	Miscanthus Rhizosphere	RLTASVPSPQARIQLVVTTDDDDPVAVTYADPRGGTRTVRHAALASVELTVRRPGHGGLTLSSRRGAYEYGTREPMPGVTPRPLPEG
Ga0209871_100000647	3300026217	Permafrost Soil	VSVTTAASDAVAVAYADPSGGRRVVRHAALAAVELTLRRPGDRELILSSSRSAYEYGTRQPLPGLVLEPLPDG
Ga0209234_12147752	3300026295	Grasslands Soil	PVAVTYTDPRGGTRAVRHAALATVELTVRRPGQGGLALSSRRGAYEYGTREPMPGITPRPLPEG
Ga0209648_100288526	3300026551	Grasslands Soil	VATDDDDPVAVTYTDPRGGTRTVRHAARAAVELTLRRPGQRDLTLTGGRGAYEFGTSHDMPGVVPQPLPEG
Ga0208724_10129622	3300027064	Forest Soil	AGIPAPHARLQLGVATGDDDPVAVTYTDPRGGTRTVQHAARAAVELTLRRPGRRELTLTGGRGAYEFGTSDKMPGIVPQPLPEG
Ga0209525_10668972	3300027575	Forest Soil	SPGARLELSVTTDDDAAVAVAYTDPRGGTRAVRHAALAHVELTVHRPGDRELTLSSSRGAYEYGTRQPMAGIVPQPLPEG
Ga0209693_101002531	3300027855	Soil	ATDDDDPVAVTYTDPRGGTRTVRHAARAVVDLTLRRPGHREVSLTGGRGAYEFGTSHGMPGIVPQPLPEG
Ga0209166_101481701	3300027857	Surface Soil	LQIAVATDDDDPVAVTYTDPRGGTRTVRHAARAAVELTLRRRGRRELTLTGGRGAYEFGTSHDMPGIVPQPLPEG
Ga0209169_102413091	3300027879	Soil	SIPSPGARLQLSVTTDDHAAVAVAYTDPRGGTRAVRHAALASVELTLHRPGDRELTLSSSRGAYEYGTRQGMPGIVPQPLPEG
Ga0209275_101437342	3300027884	Soil	AGIPAPHARLQLAVATDDDDPVAVTYTDPRGGTRTVRHAARAAIELTLRRPGQRELTLTGGCGAYEFGTSHDMPGIVPQPLPEG
Ga0209380_108211452	3300027889	Soil	AVATGDDDPVAVTYTDPRGGTRTVRHAARAAVELTLRRAGQRDLTLTGGRGAYEFGASHDVPGIVPQPLPEG
Ga0302224_104282591	3300028759	Palsa	VTTDDDDPVAVTYSDPRGGTRTVRHAALASVELTLDRPANRELVLSSGRGAYEYGTRQGMPGIEPQPLPEG
Ga0302225_103280321	3300028780	Palsa	RPGARLRVSVTTDDDDPVAVTYSDPRGGTRTVRHAALASVELTLDRPANRELALSSGRGAYEYGTRQGMPGIEPQPLPEG
Ga0302228_100624923	3300028808	Palsa	VSYTDPSGGSRAVRHAALATVELTLRRKRDRELILSSSHAAYEYGTSREMSGIMLEPLPE
Ga0302235_100031379	3300028877	Palsa	VAVTYSDPRGGTRTVRHAALASVELTLDRPANRELVLSSGRGAYEYGTRQGMPGIEPQPLPEG
Ga0311340_101067585	3300029943	Palsa	RLTADVPSPGARLRVSVTTDDDDPVAVTYSDPRGGTRTVRHAALASVELTLDRPANRELVLSSGRGAYEYGTRQGMPGIEPQPLPEG
Ga0311340_115500632	3300029943	Palsa	AGIPASRAWLQLSVTTDDAAAVAVAYTDPRGGTRAVRHAALASVELTMRRPGDRELTLSSSRGAYEYGTRQGTSRIVPQPLPEG
Ga0311339_104941742	3300029999	Palsa	PGARLRVSVTTDDDDPVAVTYSDPRGGTRTVRHAALASVELTLDRPANRELVLSSGRGAYEYGTRQGMPGIEPQPLPEG
Ga0311372_106465101	3300030520	Palsa	ADVPSPGARLLVSVTTDDDDPVAVTYTDPRGGTRTVRHAALASVELTLDRPANRELALSSGRGAYEYGTRQGMPGIEPQPLPEG
Ga0302325_123106082	3300031234	Palsa	TGDDDAVAVSYTDPSGGSRAVRHAALATVELTLRRKHDRELILSSTHAAYEYGTSREMSGIMLETLPEG
Ga0310686_1119533572	3300031708	Soil	RLTADVPSPHARLRLSVTTDDDDPIAVPYTDPRGGTRTVRHAALATVELTVHRPGDRALTLSSSRGAYEYGSRQGMPGIVPQPLPEG
Ga0310686_1151670422	3300031708	Soil	SVTADDVAAVAVAYTDPRAGTRAVRHAALASVELTVHRPGDRELTLSTSRGAYEYGTRQKIPGFAPQPLPEG
Ga0307476_102733991	3300031715	Hardwood Forest Soil	LAEDDRAAVAYADPRGETRTVTHAALASTELIMQRPGNRELTLSSSHAAYEYGARQPMPGIVPRPLPEG
Ga0307468_1001267681	3300031740	Hardwood Forest Soil	PSPQARIQLVVTTDDDDPVAVTYADTRGGTRTVRHAALASVELTVRRPGHGGLTLSSRRGAYEYGTREPMPRITPRPLPEG
Ga0318494_104544201	3300031751	Soil	SVTLAQDDRVAVAYADPRGGTRTVTHAALASVELIMYRPGDRELTLSSGHAAYEYGARQPVAGIVPRSLPAG
Ga0318494_105541531	3300031751	Soil	RLQLSVTTGDDAAVAVTYTDPRGGTRAVRHAALAGVELTLHRPGNDELTLSSGRAAYEYGTRPGTPQIVPQPLPEG
Ga0318497_101996842	3300031805	Soil	LSVTTGDDAAVAVAYTDPRGGTRAVRHAAPARVELTLHRTGDRELTLSSGRGAYEYGTRQATSGIVPQPLPEG
Ga0306923_120353811	3300031910	Soil	RARLQLAVTTDDDTSVAVTYADPRGGSRTVRHAALARVELTVRRPANPELTLSSSRGAYEYGTRQPMPGIVPQPLPEG
Ga0306926_120149021	3300031954	Soil	RLQLSVTTGDDAAVAVAYTDPRGGTRAVRHAALAGVELTLHRPGNDELTLSSGRAAYEYGTRPGTPQIVPQPLPEG
Ga0318569_101837041	3300032010	Soil	DDAAVAVAYTDPRGGTRAVRHAAPARVELTVHRPGDRELTLSSGRGAYEYGTRQATSGIVPQPLPEG
Ga0308173_118496881	3300032074	Soil	SVTTDDADPVAVTYADPRGGTRAVRHAALAGVTLSLRRPGHPELTLSSRRGAYEYGTAQPMPRIEPRPLPEG
Ga0318540_105235242	3300032094	Soil	LQLSVTTGDDDPVAVPYTDPRGGTRTVRHAALARVELTLRRPGDRELTLTSSRGAYEYGTRQDMPGIVPQPLPEG
Ga0311301_112365282	3300032160	Peatlands Soil	VTADDGDPVAVVYTDPGGGTRTVRHAALPRVELALRRPGHPELTLSTTGGAYEYGTSQPTPGIVPQPLPE
Ga0307472_1007982672	3300032205	Hardwood Forest Soil	TTDDDDPVAVTYADPRGGTRTVRRAALATVELTVRRPGHGGLTLSSRHGAYEYGTREPMPGIAPRPLPEG
Ga0335078_114153121	3300032805	Soil	VTTADDDAVAVSYADPRGGTRAVRHATLAQVEMTVHRQGEREVTLSTSRGAYEYGTSQ
Ga0335078_123162862	3300032805	Soil	AVIYADPRGGTRTVRHAALASVTLSLRRPGRPDLTLSSRRGAYEYGTAQPMPGIEPRPLPEG
Ga0335075_114051532	3300032896	Soil	PRGETRTVTHAALASVELTMQRPGNHELALSSSHAAYEYGARQPMPGIVPRSLPEG
Ga0335072_103394591	3300032898	Soil	VPYADPRGETRTVTHAALASVELTMQRPGNHELALSSSHAAYEYGARQPMPGIVPRSLPE
Ga0335077_104986121	3300033158	Soil	SVTLAEDDRAAVAYADPRGETRTVTHAALASVELIMQRPGNRELTLSSSHAAYEYGARQPVPGIVPQSLPEG
Ga0370515_0142820_735_956	3300034163	Untreated Peat Soil	LSVTTDDEDSVAVSYADPRGGTRAVTHTALASVELTLHRLGDREVTLSSSRGAYEYGTRQDVPGIVPQPLPEG

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign