Metagenome / Metatranscriptome Family F062186

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062186
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	58 residues
Representative Sequence	MLLDRKIGGFMPNKPKKEEDYVQEDFYCEMCGRTTKEETELDEKLNKFLCEGCRKEQERKRK
Number of Associated Samples	83
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	76.34 %
% of genes near scaffold ends (potentially truncated)	14.50 %
% of genes from short scaffolds (< 2000 bps)	76.34 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.725 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (38.931 % of family members)
Environment Ontology (ENVO)	Unclassified (93.130 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (79.389 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 12.22% β-sheet: 11.11% Coil/Unstructured: 76.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF04545	Sigma70_r4	48.09
PF00909	Ammonium_transp	4.58
PF03567	Sulfotransfer_2	3.82
PF09414	RNA_ligase	2.29
PF04542	Sigma70_r2	1.53
PF00111	Fer2	1.53
PF11927	DUF3445	1.53
PF00497	SBP_bac_3	0.76
PF01555	N6_N4_Mtase	0.76
PF01432	Peptidase_M3	0.76
PF14902	DUF4494	0.76
PF01458	SUFBD	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0004	Ammonia channel protein AmtB	Inorganic ion transport and metabolism [P]	4.58
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.53
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	1.53
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.53
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	1.53
COG0339	Zn-dependent oligopeptidase, M3 family	Posttranslational modification, protein turnover, chaperones [O]	0.76
COG0719	Fe-S cluster assembly scaffold protein SufB	Posttranslational modification, protein turnover, chaperones [O]	0.76
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.76
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.76
COG1164	Oligoendopeptidase F	Amino acid transport and metabolism [E]	0.76
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.73 %
All Organisms	root	All Organisms	44.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.73 %
cellular organisms	root	All Organisms → cellular organisms	44.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.73 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.46 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	3.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.73 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	32.82 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	3.82 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.76 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.73 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	32.82 %
Candidatus Pacearchaeota	clade	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota	3.05 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.76 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.73 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	32.82 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	3.05 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.73 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	32.06 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	3.05 %
Microgenomates group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group	0.76 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.76 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.73 %
unclassified Parcubacteria group	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group	32.06 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	3.05 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.76 %
Candidatus Microgenomates	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Microgenomates	0.76 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.73 %
Parcubacteria group bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	32.06 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	3.05 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.76 %
Candidatus Microgenomates	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Microgenomates	0.76 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002231\|KVRMV2_101377531	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	923	Open in IMG/M
3300002484\|JGI25129J35166_1014336	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1958	Open in IMG/M
3300002518\|JGI25134J35505_10021515	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1958	Open in IMG/M
3300002519\|JGI25130J35507_1003320	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	4635	Open in IMG/M
3300002519\|JGI25130J35507_1004277	Not Available	4009	Open in IMG/M
3300003542\|FS900DNA_10329269	Not Available	768	Open in IMG/M
3300003690\|PicViral_1003006	Not Available	8515	Open in IMG/M
3300003690\|PicViral_1005021	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	3281	Open in IMG/M
3300005398\|Ga0066858_10004634	All Organisms → cellular organisms → Bacteria	4342	Open in IMG/M
3300005398\|Ga0066858_10170253	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	629	Open in IMG/M
3300005425\|Ga0066859_10010184	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	2851	Open in IMG/M
3300005425\|Ga0066859_10015330	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	2337	Open in IMG/M
3300005969\|Ga0066369_10066849	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	1253	Open in IMG/M
3300006002\|Ga0066368_10103318	Not Available	980	Open in IMG/M
3300006002\|Ga0066368_10169168	Not Available	747	Open in IMG/M
3300006002\|Ga0066368_10265204	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300006002\|Ga0066368_10316062	Not Available	529	Open in IMG/M
3300006013\|Ga0066382_10171906	Not Available	751	Open in IMG/M
3300006164\|Ga0075441_10036832	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	1973	Open in IMG/M
3300006308\|Ga0068470_1801927	Not Available	535	Open in IMG/M
3300006310\|Ga0068471_1219982	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	2641	Open in IMG/M
3300006310\|Ga0068471_1256282	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	902	Open in IMG/M
3300006310\|Ga0068471_1455401	Not Available	934	Open in IMG/M
3300006331\|Ga0068488_1377220	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300006336\|Ga0068502_1206989	Not Available	1256	Open in IMG/M
3300006338\|Ga0068482_1069376	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	548	Open in IMG/M
3300006339\|Ga0068481_1230828	Not Available	1573	Open in IMG/M
3300006340\|Ga0068503_10164258	All Organisms → cellular organisms → Bacteria	2625	Open in IMG/M
3300006340\|Ga0068503_10227082	All Organisms → cellular organisms → Bacteria	4141	Open in IMG/M
3300006340\|Ga0068503_10642269	Not Available	752	Open in IMG/M
3300006340\|Ga0068503_11051997	Not Available	562	Open in IMG/M
3300006736\|Ga0098033_1028197	Not Available	1714	Open in IMG/M
3300006736\|Ga0098033_1029433	Not Available	1671	Open in IMG/M
3300006736\|Ga0098033_1118017	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Microgenomates	750	Open in IMG/M
3300006753\|Ga0098039_1032756	Not Available	1844	Open in IMG/M
3300006789\|Ga0098054_1221524	Not Available	686	Open in IMG/M
3300006900\|Ga0066376_10065586	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	2299	Open in IMG/M
3300006900\|Ga0066376_10113767	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1674	Open in IMG/M
3300006900\|Ga0066376_10755609	Not Available	530	Open in IMG/M
3300006923\|Ga0098053_1014173	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	1774	Open in IMG/M
3300006929\|Ga0098036_1000207	All Organisms → cellular organisms → Bacteria	27984	Open in IMG/M
3300007758\|Ga0105668_1127873	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	882	Open in IMG/M
3300008050\|Ga0098052_1086413	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	1293	Open in IMG/M
3300008216\|Ga0114898_1005472	Not Available	5618	Open in IMG/M
3300008216\|Ga0114898_1097031	Not Available	885	Open in IMG/M
3300008217\|Ga0114899_1182297	Not Available	672	Open in IMG/M
3300009102\|Ga0114948_11308398	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	574	Open in IMG/M
3300009173\|Ga0114996_10175175	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	1749	Open in IMG/M
3300009173\|Ga0114996_10412042	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	1034	Open in IMG/M
3300009595\|Ga0105214_117171	Not Available	566	Open in IMG/M
3300009605\|Ga0114906_1047521	Not Available	1645	Open in IMG/M
3300009620\|Ga0114912_1087388	Not Available	757	Open in IMG/M
3300009622\|Ga0105173_1020032	Not Available	1005	Open in IMG/M
3300009622\|Ga0105173_1033118	Not Available	827	Open in IMG/M
3300009622\|Ga0105173_1062448	Not Available	643	Open in IMG/M
3300009703\|Ga0114933_10333116	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	1003	Open in IMG/M
3300010151\|Ga0098061_1011469	All Organisms → cellular organisms → Bacteria	3805	Open in IMG/M
3300010151\|Ga0098061_1126556	Not Available	938	Open in IMG/M
3300010155\|Ga0098047_10019406	Not Available	2733	Open in IMG/M
3300010155\|Ga0098047_10326129	Not Available	578	Open in IMG/M
3300010883\|Ga0133547_10390277	Not Available	2850	Open in IMG/M
3300011112\|Ga0114947_10812258	Not Available	685	Open in IMG/M
3300012950\|Ga0163108_10476511	Not Available	806	Open in IMG/M
3300012953\|Ga0163179_10877012	Not Available	775	Open in IMG/M
3300017697\|Ga0180120_10042155	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	2076	Open in IMG/M
3300017715\|Ga0181370_1035963	Not Available	641	Open in IMG/M
3300017718\|Ga0181375_1019519	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	1164	Open in IMG/M
3300017757\|Ga0181420_1079954	Not Available	1021	Open in IMG/M
3300017775\|Ga0181432_1067320	Not Available	1028	Open in IMG/M
3300017775\|Ga0181432_1148112	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	720	Open in IMG/M
3300020303\|Ga0211692_1040024	Not Available	583	Open in IMG/M
3300020354\|Ga0211608_10064046	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	839	Open in IMG/M
3300020398\|Ga0211637_10140514	Not Available	967	Open in IMG/M
3300020447\|Ga0211691_10084657	Not Available	1156	Open in IMG/M
3300020447\|Ga0211691_10112903	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	1009	Open in IMG/M
3300020447\|Ga0211691_10240684	Not Available	705	Open in IMG/M
3300020458\|Ga0211697_10048664	Not Available	1781	Open in IMG/M
3300020458\|Ga0211697_10134999	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	1022	Open in IMG/M
3300020458\|Ga0211697_10354542	Not Available	610	Open in IMG/M
3300020458\|Ga0211697_10501270	Not Available	507	Open in IMG/M
3300020471\|Ga0211614_10349681	Not Available	650	Open in IMG/M
3300021352\|Ga0206680_10348374	Not Available	575	Open in IMG/M
3300021442\|Ga0206685_10084132	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	1044	Open in IMG/M
3300022225\|Ga0187833_10022123	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	4931	Open in IMG/M
3300022225\|Ga0187833_10035298	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	3657	Open in IMG/M
3300022225\|Ga0187833_10136055	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	1519	Open in IMG/M
3300022227\|Ga0187827_10025999	All Organisms → cellular organisms → Bacteria	5209	Open in IMG/M
3300022227\|Ga0187827_10653541	Not Available	605	Open in IMG/M
3300024344\|Ga0209992_10318624	Not Available	631	Open in IMG/M
3300025082\|Ga0208156_1060201	Not Available	741	Open in IMG/M
3300025109\|Ga0208553_1091945	Not Available	709	Open in IMG/M
3300025118\|Ga0208790_1175398	Not Available	579	Open in IMG/M
3300025122\|Ga0209434_1010898	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	3370	Open in IMG/M
3300025122\|Ga0209434_1111276	Not Available	774	Open in IMG/M
3300025128\|Ga0208919_1021914	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	2392	Open in IMG/M
3300025141\|Ga0209756_1027768	All Organisms → cellular organisms → Archaea → DPANN group	3107	Open in IMG/M
3300025141\|Ga0209756_1229686	Not Available	692	Open in IMG/M
3300025268\|Ga0207894_1069876	Not Available	601	Open in IMG/M
3300025270\|Ga0208813_1060181	Not Available	818	Open in IMG/M
3300026087\|Ga0208113_1026422	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	1721	Open in IMG/M
3300026117\|Ga0208317_1013005	Not Available	533	Open in IMG/M
3300026119\|Ga0207966_1057589	Not Available	993	Open in IMG/M
3300026211\|Ga0208132_1015916	Not Available	2026	Open in IMG/M
3300026211\|Ga0208132_1040661	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	1154	Open in IMG/M
3300026211\|Ga0208132_1041699	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	1136	Open in IMG/M
3300026211\|Ga0208132_1112004	Not Available	612	Open in IMG/M
3300027685\|Ga0209554_1032796	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	2049	Open in IMG/M
3300027704\|Ga0209816_1093533	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	1191	Open in IMG/M
3300027714\|Ga0209815_1160102	Not Available	713	Open in IMG/M
3300027838\|Ga0209089_10169867	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	1303	Open in IMG/M
3300027838\|Ga0209089_10309916	Not Available	897	Open in IMG/M
3300028022\|Ga0256382_1001376	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	3084	Open in IMG/M
3300028039\|Ga0256380_1012777	Not Available	1349	Open in IMG/M
3300031801\|Ga0310121_10049524	Not Available	2835	Open in IMG/M
3300031801\|Ga0310121_10076573	Not Available	2187	Open in IMG/M
3300031801\|Ga0310121_10174670	Not Available	1323	Open in IMG/M
3300031801\|Ga0310121_10201754	Not Available	1210	Open in IMG/M
3300031801\|Ga0310121_10392019	Not Available	790	Open in IMG/M
3300031801\|Ga0310121_10661342	Not Available	558	Open in IMG/M
3300031802\|Ga0310123_10106957	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	1940	Open in IMG/M
3300031802\|Ga0310123_10137851	Not Available	1676	Open in IMG/M
3300031803\|Ga0310120_10042763	Not Available	2694	Open in IMG/M
3300031811\|Ga0310125_10055905	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	2098	Open in IMG/M
3300032138\|Ga0315338_1044486	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	1769	Open in IMG/M
3300032138\|Ga0315338_1125133	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	831	Open in IMG/M
3300032278\|Ga0310345_10018281	Not Available	5869	Open in IMG/M
3300032278\|Ga0310345_10275422	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	1552	Open in IMG/M
3300032278\|Ga0310345_10605655	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	1055	Open in IMG/M
3300032278\|Ga0310345_12259073	Not Available	526	Open in IMG/M
3300032820\|Ga0310342_100547361	Not Available	1301	Open in IMG/M
3300032820\|Ga0310342_101248933	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	879	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	77.10%
Unclassified	Environmental → Aquatic → Marine → Unclassified	10.69%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	3.05%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	3.05%
Strait	Environmental → Aquatic → Marine → Strait	2.29%
Pelagic	Environmental → Aquatic → Marine → Pelagic	1.53%
Volcanic	Environmental → Aquatic → Marine → Volcanic	1.53%
Coastal	Environmental → Aquatic → Marine → Coastal	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	64.89%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	10.69%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	9.16%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	3.05%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	2.29%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	1.53%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	1.53%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	1.53%
Black Smokers	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers	1.53%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	1.53%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.76%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	0.76%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	0.76%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	38.93%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	10.69%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	8.40%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	8.40%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	7.63%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	5.34%
Marine Oceanic	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic	3.82%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	3.05%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	2.29%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	1.53%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	1.53%
Marine, Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Marine, Hydrothermal Vent Plume	1.53%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	1.53%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.76%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	0.76%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	0.76%
Background Seawater	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Background Seawater	0.76%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.76%
Diffuse Hydrothermal Flow Volcanic Vent	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent	0.76%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002231	Marine sediment microbial communities from Santorini caldera mats, Greece - red mat	Environmental	Open in IMG/M
3300002484	Marine viral communities from the Pacific Ocean - ETNP_2_130	Environmental	Open in IMG/M
3300002518	Marine viral communities from the Pacific Ocean - ETNP_6_100	Environmental	Open in IMG/M
3300002519	Marine viral communities from the Pacific Ocean - ETNP_2_300	Environmental	Open in IMG/M
3300003542	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS900_Dependable_DNA	Environmental	Open in IMG/M
3300003690	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Piccard2013-Plume - Viral/microbial metagenome assembly	Environmental	Open in IMG/M
3300005398	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV201	Environmental	Open in IMG/M
3300005425	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV199	Environmental	Open in IMG/M
3300005969	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_Bottom_ad_4513_LV_A	Environmental	Open in IMG/M
3300006002	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_NADW_ad_2505m_LV_A	Environmental	Open in IMG/M
3300006013	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_NADW_ad_2500m_LV_B	Environmental	Open in IMG/M
3300006164	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA	Environmental	Open in IMG/M
3300006308	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500m	Environmental	Open in IMG/M
3300006310	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500m	Environmental	Open in IMG/M
3300006331	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_1000m	Environmental	Open in IMG/M
3300006336	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500m	Environmental	Open in IMG/M
3300006338	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_0770m	Environmental	Open in IMG/M
3300006339	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500m	Environmental	Open in IMG/M
3300006340	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770m	Environmental	Open in IMG/M
3300006736	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG	Environmental	Open in IMG/M
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006900	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A	Environmental	Open in IMG/M
3300006923	Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG	Environmental	Open in IMG/M
3300006929	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG	Environmental	Open in IMG/M
3300007758	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample CTDPlume_2015_DNA CLC_assembly	Environmental	Open in IMG/M
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental	Open in IMG/M
3300008216	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar	Environmental	Open in IMG/M
3300008217	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215	Environmental	Open in IMG/M
3300009102	Deep subsurface microbial communities from Mariana Trench to uncover new lineages of life (NeLLi) - CR04 metaG	Environmental	Open in IMG/M
3300009173	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134	Environmental	Open in IMG/M
3300009595	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3635_2500	Environmental	Open in IMG/M
3300009605	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9	Environmental	Open in IMG/M
3300009620	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51	Environmental	Open in IMG/M
3300009622	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155	Environmental	Open in IMG/M
3300009703	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaG	Environmental	Open in IMG/M
3300010151	Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaG	Environmental	Open in IMG/M
3300010155	Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaG	Environmental	Open in IMG/M
3300010883	western Arctic Ocean co-assembly	Environmental	Open in IMG/M
3300011112	Deep subsurface microbial communities from Mariana Trench to uncover new lineages of life (NeLLi) - CR02 metaG	Environmental	Open in IMG/M
3300012950	Marine microbial communities from the Central Pacific Ocean - Fk160115 155m metaG	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300017715	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_06 viral metaG	Environmental	Open in IMG/M
3300017718	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_11 viral metaG	Environmental	Open in IMG/M
3300017757	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22	Environmental	Open in IMG/M
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental	Open in IMG/M
3300020303	Marine microbial communities from Tara Oceans - TARA_B100000745 (ERX556095-ERR599124)	Environmental	Open in IMG/M
3300020354	Marine microbial communities from Tara Oceans - TARA_B100000408 (ERX555905-ERR599164)	Environmental	Open in IMG/M
3300020398	Marine microbial communities from Tara Oceans - TARA_B100000949 (ERX555993-ERR599072)	Environmental	Open in IMG/M
3300020447	Marine microbial communities from Tara Oceans - TARA_B100000745 (ERX556090-ERR599159)	Environmental	Open in IMG/M
3300020458	Marine microbial communities from Tara Oceans - TARA_B100000749 (ERX556123-ERR599000)	Environmental	Open in IMG/M
3300020471	Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX556063-ERR599002)	Environmental	Open in IMG/M
3300021352	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 150m 12015	Environmental	Open in IMG/M
3300021442	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 200m 12015	Environmental	Open in IMG/M
3300022225	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_400_PacBio MetaG (Illumina Assembly)	Environmental	Open in IMG/M
3300022227	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)	Environmental	Open in IMG/M
3300024344	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)	Environmental	Open in IMG/M
3300025082	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG (SPAdes)	Environmental	Open in IMG/M
3300025109	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)	Environmental	Open in IMG/M
3300025118	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)	Environmental	Open in IMG/M
3300025122	Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)	Environmental	Open in IMG/M
3300025128	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)	Environmental	Open in IMG/M
3300025141	Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)	Environmental	Open in IMG/M
3300025268	Marine viral communities from the Deep Pacific Ocean - MSP-114 (SPAdes)	Environmental	Open in IMG/M
3300025270	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904 (SPAdes)	Environmental	Open in IMG/M
3300026087	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_NADW_ad_2505m_LV_A (SPAdes)	Environmental	Open in IMG/M
3300026117	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3635_2500 (SPAdes)	Environmental	Open in IMG/M
3300026119	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_NADW_ad_2500m_LV_B (SPAdes)	Environmental	Open in IMG/M
3300026211	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV199 (SPAdes)	Environmental	Open in IMG/M
3300027685	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - Bottom_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300027704	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA (SPAdes)	Environmental	Open in IMG/M
3300027714	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA (SPAdes)	Environmental	Open in IMG/M
3300027838	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)	Environmental	Open in IMG/M
3300028022	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750m	Environmental	Open in IMG/M
3300028039	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 2300m	Environmental	Open in IMG/M
3300031801	Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986	Environmental	Open in IMG/M
3300031802	Marine microbial communities from Western Arctic Ocean, Canada - CB6_AW_1057	Environmental	Open in IMG/M
3300031803	Marine microbial communities from Western Arctic Ocean, Canada - CB27_AW_983	Environmental	Open in IMG/M
3300031811	Marine microbial communities from Western Arctic Ocean, Canada - CB11b_Tmax_Bot8	Environmental	Open in IMG/M
3300032138	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - ASW #8	Environmental	Open in IMG/M
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental	Open in IMG/M
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KVRMV2_1013775312	3300002231	Marine Sediment	VLLGRKLGGFAPHKPKKAEQFVQEEFYCEMCGRTTNEETILEEKLGKYLCEGCRKE
JGI25129J35166_10143364	3300002484	Marine	MPNKPKKEENYVQEEYYCEMCGRVSEEETELNEKTNKFLCAGCLTEQXGKTK*
JGI25134J35505_100215154	3300002518	Marine	MPNKPKKEENYVQEEYYCEMCGRVSEEETELNEKTNKFLCAGCLTEQEGKTK*
JGI25130J35507_10033207	3300002519	Marine	MPNKPKKEEDYIQEDFYCEMCGRTTKEETELDEKLNKFLCEGCRKEQERKNK*
JGI25130J35507_10042774	3300002519	Marine	MPNKPKKEENYVQEEYYCEMCGRVSEEETELNEKTNKFLCXGCLTEQEGKTK*
FS900DNA_103292692	3300003542	Diffuse Hydrothermal Flow Volcanic Vent	MLIDRKLGGFMPNKPKKKETYVQEEYYCEMCGRVSEEETELNEKTNKFLCAGCLTEQERKTKCKIW*
PicViral_100300610	3300003690	Marine, Hydrothermal Vent Plume	MLIDRKLGGFMPNKPKKKETYVQEEYYCEMCGRVSEEETELNEKTNKFLCAGCLAEQERKTK*
PicViral_10050218	3300003690	Marine, Hydrothermal Vent Plume	MPNKPKKTEKYVQEEFYCEMCGRTTKEETELHEATTKYLCSGCWKEQERKTK*
Ga0066858_100046345	3300005398	Marine	MPNKPKKEENYVQEEYYCEMCGRVSEEETELNEKTNKFLCAGCLTEQERKTK*
Ga0066858_101702531	3300005398	Marine	VLIDRKIGGFMPNNPKNSEQYIQEDFYCEMCGRTTKEETELDEKLNKYLCEGCRKEQERKNK*
Ga0066859_100101847	3300005425	Marine	MANKPKKEENYVQEEYYCEMCGRVSEEETELNEKTNKFLCAGCLTEQEGKTK*
Ga0066859_100153305	3300005425	Marine	MPNNPKNSEQYIQKDFYCEMCGRTTKEETELDEKLNKYLCEGCRKEQERKNK*
Ga0066369_100668492	3300005969	Marine	MANKPKKEEAYIQEDFYCEMCGRTTKEETELYEKLNKYLCEGCRKEQERKKK*
Ga0066368_101033181	3300006002	Marine	MPNKPKKEEDYVQEDFYCEMCGRTTKEETELDEKLNKYLCEGCRKEHERKKK*
Ga0066368_101691681	3300006002	Marine	MPNKPKKKETYVQEEYYCEMCGRVSEEETELNEKTNKFLCAGCLTEQERKTK*
Ga0066368_102652043	3300006002	Marine	VLIDRKIGGFMPNKPKNTEQYIQEDFYCEMCGRTTKEETELYEKLNKYLCEGCRKEQERKKK*
Ga0066368_103160623	3300006002	Marine	MLLDRKIGGFMPNKPKKTEEYVQEEFYCEMCGRTTKEETELHEATTKYLCSGCWEEQERKTK*
Ga0066382_101719062	3300006013	Marine	MLLDRKLGGFMPDKPKKTERYVQEEFYCEMCGRTTKEETLLHEATTKYLCSGCWKEQERKTK*
Ga0075441_100368325	3300006164	Marine	MTFERKLGGFAPSRKTPTDYVQEEYYCELCGRTTKEETELDDKLNKYLCEGCHKEQKGKKK*
Ga0068470_18019271	3300006308	Marine	VLLDRKIGGFAPNNPKNKEQYIQEDFYCEMCGRTTKEETELDEKLNKYLCEGCRKEQERKNK*
Ga0068471_12199822	3300006310	Marine	MLLDRKIGGFAPNNPKNKEQYVQEDFYCELCGRTTKEETELDEKLNKYLCEGCRKEQERKNK*
Ga0068471_12562822	3300006310	Marine	MNLGRKIGGFSAAKPKKSETYVQQEFYCEMCGRTTKEETELDEKTNKFLCEGCRKEQERKTK*
Ga0068471_14554011	3300006310	Marine	PKKTENYVQEEFYCEMCGRTTKEETLLHEATTKYLCSGCLEEQERKTK*
Ga0068488_13772203	3300006331	Marine	MPNKPKKEEDYVQEDFYCEMCGRTTKEETELDEKLNKYLCEGCRKEQEGKRK*
Ga0068502_12069891	3300006336	Marine	VLLDRKIGGFAPNNPKNKEQYVQEDFYCEMCGRTTKEETELDEKLNKFLCEGCRKEQEGKRK*
Ga0068482_10693762	3300006338	Marine	MNLGRKIGGFAAAKPKKSETYVQQEFYCEMCGRTSKEETELDEKTNKFLCEGCRKEQERKTK*
Ga0068481_12308284	3300006339	Marine	MPNKPKNSEQYIQEDFYCELCGRTTKEETELDEKLNKYLCEGCRKEQERKKK*
Ga0068503_101642582	3300006340	Marine	MANKPKKEENYVQEEYYCEMCGRVSEEETELNEKTNKFLCAGCLAEQERKTK*
Ga0068503_1022708210	3300006340	Marine	MLLDRKIGGFMPNNPKNVEQYVQEDFYCEMCGRTTKEETELDEKLNKYLCEGCRKEQERKNK*
Ga0068503_106422691	3300006340	Marine	MLIDRKIGGFMPNKPKNSEPYIQEDFYCEMCGRTTKEETELDEKLNKYLCEGCRKEQERKKK*
Ga0068503_110519971	3300006340	Marine	MPNKPKKKETYVQEEYYCEMCGRVSEEETELNEKTNKFLCAGCLTEQEGKSK*
Ga0098033_10281975	3300006736	Marine	VLLNRKIGGFAPNKPKQSEQYVQEDFYCEMCGRTTKEETELNEKLNKYLCDGCRKEQERKNK*
Ga0098033_10294336	3300006736	Marine	VLIDRKIGGFMPNKPKKEEDYIQEDFYCEMCGRTTKEETELDEKLNNFLCEGCRKEQERKNK*
Ga0098033_11180172	3300006736	Marine	MLLNRKLGGFSPQKPKKIENYVQEEFYCEMCGRTTKEETELHEATTKYLCSGCWEEQERKTK*
Ga0098039_10327565	3300006753	Marine	VLIDRKIGGFMPNNPKNSEQYIQEDFYCEMCGRTTKEETELDEKLNKFLCEGCRKEQERKNK*
Ga0098054_12215241	3300006789	Marine	PENSENFVQEDFYCEMCGRTTKEETILDNKLNKYLCNGCEEEQKKKEKK*
Ga0066376_100655864	3300006900	Marine	MANKPKKEEAYIQEDFYCEMCGRTTKEETELNEKLNKYLCEGCRKEQERKKK*
Ga0066376_101137676	3300006900	Marine	MLIDRKLGGFMPNKPKKKETYVQEEYYCEMCGRASEEETELNEKTNKFLCAGCLTEQERK
Ga0066376_107556091	3300006900	Marine	KKKETYVQEEYYCEMCGRVSEEETELNEKTNKFLCAGCLAEQERKTK*
Ga0098053_10141732	3300006923	Marine	MTLDRKLGGFAPDNKKADEYVQQEYYCELCGRTTKEETELDDKLNKYLCEGCRKEQKGKKK*
Ga0098036_100020736	3300006929	Marine	MTLDRKLGGFAPDNKKANEYVQQEYYCELCGRTTKEETELDDTINKYLCEGCRKEQKGKKK*
Ga0105668_11278731	3300007758	Background Seawater	MLIDRKLGGFMANKPKKEENYVQEEYYCEMCGRVSEEETELNEKTNKFLCAGCLAEQERKTK*
Ga0098052_10864132	3300008050	Marine	MLMDRSLIGFGPNKPNNSENFVQEDFYCEMCGRTTKEETILDNKLNKYLCNGCEEEQKKKEKK*
Ga0114898_10054723	3300008216	Deep Ocean	VLIDRKIGGFMPNKPKNTEQYIQEDFYCEMCGRTTKEETELDEKLNKFLCEGCRKEQERKNK*
Ga0114898_10970312	3300008216	Deep Ocean	MLINRKLGGFMANKPKKEENYVQEEYYCEMCGRVSEEETELNEKTNKFLCAGCLAEQERKTK*
Ga0114899_11822972	3300008217	Deep Ocean	MLLDRKIGGLSPQKPKKTENYVQEEFYCEMCGRTTKEETELDEKLNKYLCEGCRKEQEGKRK*
Ga0114948_113083982	3300009102	Deep Subsurface	MLLDRKIGGFMPNKPKKEEDYVQEDFYCEMCGRTTKEETELDEKLNKFLCEGCRKEQERKRK*
Ga0114996_101751752	3300009173	Marine	MLLDRKMGGFMPDNRKKEESYIQEDFYCEMCSRTTKEETELDEKLNKYLCEGCRKEQERKRNEKDS*
Ga0114996_104120422	3300009173	Marine	MLLDRKIGGFMPNKPKKEEAYVQEDFYCELCGRTTKEETELDEKLNKFLCEGCRKEQKGKKK*
Ga0105214_1171712	3300009595	Marine Oceanic	MLIDRKIGGFMPNKPKNTEQYIQEDFYCEMCGRTTKEETELYEKLNKYLCEGCRKEQERKKK*
Ga0114906_10475214	3300009605	Deep Ocean	MLLDRKIGGFMPDKPKKTERYVQEEFYCEMCGRTTKEETELHEATTKYLCSGCLEEQERKTK*
Ga0114912_10873881	3300009620	Deep Ocean	QKPKKIENYVQEEFYCEMCGRTTKEETELHEATTKYLCSGCWEEQERKTK*
Ga0105173_10200321	3300009622	Marine Oceanic	MLLDRKIGGFMPNKPKKTEKYVQEEFYCEMCGRTTKEETLLHEATTKYLCSGCWKEQERKTK*
Ga0105173_10331182	3300009622	Marine Oceanic	MPNKPKKEESYVQEEYYCEMCGRVSEEETELNEKTNKFLCAGCLTEQERKTK*
Ga0105173_10624482	3300009622	Marine Oceanic	VLIDRKIGGFMANKPKKEEAYIQEDFYCEMCGRTTKEETELNEKLNKYLCEGCRKEQERKKKGKRNE*
Ga0114933_103331163	3300009703	Deep Subsurface	MTLDRKLGGFAPDNKKADEYVQQEYYCELCGRTTKEETELDDKLNKYL
Ga0098061_10114693	3300010151	Marine	MLINRKLGGFMPNKPKKEENYVQEEYYCEMCGRVSEEETELNEKTNKFLCAGCLTEQEGKTK*
Ga0098061_11265563	3300010151	Marine	MLMDRSLIGFGPNKPKNSENFVQEDFYCEMCGRTTKEETILDNKLNKYLCNGCEEEQKKKEKK*
Ga0098047_100194067	3300010155	Marine	VLLNRKIGGFAPNNPKNVEQYVQEDFYCEMCGRTTKEETELNEKLSKYLCDGCRKEQERKNK*
Ga0098047_103261291	3300010155	Marine	MLLNRKLGGFSPQKPKKIENYVQEEFYCEMCGRTTKEETELHEATTKYLCSGCLEEQERKTK*
Ga0133547_103902777	3300010883	Marine	MLLDRKIGGFMPNNPKNVEQYIQEDFYCEMCGRTTKEETELDEKLNKYLCDGCRKEQERKRK*
Ga0114947_108122582	3300011112	Deep Subsurface	MLIDRKIGGFMPNKPKNTEQYIQEDFYCEMCGRTTKEETELDEKLNKYLCEGCRKEHERKKK*
Ga0163108_104765112	3300012950	Seawater	MLMDRSLIGFGPNKPENSENFVQEDFYCEMCGRTTKEETILDNKLNKYLCNGCEEEQKKKEKK*
Ga0163179_108770122	3300012953	Seawater	MLTDRSLIGFGPNKPKNSENFVQEDFYCEMCGRTTKEETILDDKLNKYLCNGCEEEQKKKEKN*
Ga0180120_100421552	3300017697	Freshwater To Marine Saline Gradient	MTLDRKLGGFAPDNSKSADYVQEEYYCELCGRTSKDETELDEKLNKFLCEPCRKEKKGKN
Ga0181370_10359631	3300017715	Marine	MPNKPKKEEDYIQEDFYCEMCGRTTKEETELDEKLNKFLCEGCRKEQERKNK
Ga0181375_10195193	3300017718	Marine	VLLNRKIGGFAPNKPKQSEQYVQEDFYCEMCGRTTKEETELNEKLNKYLCDGC
Ga0181420_10799542	3300017757	Seawater	MTLDRKLGGFAPDNSNSADYVQEEYYCELCGRTSKDETELDEKLNKFLCEPCRKEKKGKN
Ga0181432_10673202	3300017775	Seawater	MLLNRKLGGFSPQKPKKTENYVQEEFYCEMCGRTTKEETLLHEATTKYLCSGCLKEQERKAK
Ga0181432_11481122	3300017775	Seawater	MNLGRKIGGFAAAKPKKSETYVQQEFYCEMCGRTSKEETELDEKTNKFLCEGCRKEKEKKAK
Ga0211692_10400241	3300020303	Marine	VLIDRKIGGFAPNNPKNKEQYVQEDFYCEMCGRTTKEETELDEKLNKYLCEGCRKEQERKKK
Ga0211608_100640462	3300020354	Marine	VLLDRKIGGFAPNNPKNKEQYVQEDFYCEMCGRTTKEETELDEKLNKYLCDGCRKEQERKKK
Ga0211637_101405142	3300020398	Marine	MPNNPKNVEQYVQEDFYCEMCGRTTKEETELDEKLNKYLCEGCRKEQERKNK
Ga0211691_100846573	3300020447	Marine	VLLDRKIGGFAPNNPKNKEQYIQEDFYCEMCGRTTKEETELDEKLNKYLCEGCRKEQERKNK
Ga0211691_101129032	3300020447	Marine	MTFDRKLGGFAPSRKSPTDYVQEEYYCELCGRTTKEETELDDKLNKYLCEGCRKEQKGKK
Ga0211691_102406843	3300020447	Marine	NRKLGGFMPNKPKKEENYVQEEYYCEMCGRVSEEETELNEKTNKFLCAGCLTEQEGKTK
Ga0211697_100486641	3300020458	Marine	MLLDRKIGGFMPNNPKNVEQYIQEDFYCEMCGRTTKEETELDEKLNKYLCEGCRKEQEGKRK
Ga0211697_101349992	3300020458	Marine	MMNLGRKIGGFAAAKPKKSETYVQQDFYCEMCGRTSKEETELDEKTNKFLCEGCRKEQERKTK
Ga0211697_103545421	3300020458	Marine	MPNKPKKEENYVQEEYYCEMCGRVSEEETELNEKTNKFLCAGCLTEQEGKSK
Ga0211697_105012703	3300020458	Marine	MPNNPKNVEQYIQEDFYCEMCGRTTKEETELNEKLNKYLCEGCRKEQERKKK
Ga0211614_103496812	3300020471	Marine	LNLDRKLGGFAPNNSKAEDYVQEEYYCELCGRVSKEETELDQKTNKFLCEPCRKEMEGKS
Ga0206680_103483742	3300021352	Seawater	VLLNRKLGGFAPHKPTKSEQYVQQDFYCEMCARTTKEETILEEKLGKYLCEGCRKEYERKNK
Ga0206685_100841325	3300021442	Seawater	GFMPNKPKKEENYVQEEYYCEMCGRVSEEETELNEKTNKFLCAGCLTEQEGKTK
Ga0187833_100221239	3300022225	Seawater	VLIDRKIGGFMPNNPKKEEDYIQEDFYCEMCGRTTKEETELDEKLNKFLCEGCRKEQERKNK
Ga0187833_100352985	3300022225	Seawater	MPNKPKKEENYVQEEYYCEMCGRVSEEETELNEKTNKFLCAGCLTEQERKTK
Ga0187833_101360551	3300022225	Seawater	MLLNRKLGGFSPQKPKKIENYVQEEFYCEMCGRTTKEETLLHEATTKYLCSGCLEEQERK
Ga0187827_100259999	3300022227	Seawater	MPNKPKKEENYVQEEYYCEMCGRVSEEETELNEKTNKFLCAGCLTEQEGKTK
Ga0187827_106535412	3300022227	Seawater	VLLNRKIGGFAPNKPKQSEQYVQEDFYCEMCGRTTKEETELNEKLNKYLCDGCRKEQERKNK
Ga0209992_103186242	3300024344	Deep Subsurface	MTLDRKLGGFAPDNKKADEYVQQEYYCELCGRTTKEETELDDKLNKYLCEGCRKEQKGKK
Ga0208156_10602012	3300025082	Marine	MLLNRKLGGFSPQKPKKIENYVQEEFYCEMCGRTTKEETELHEATTKYLCSGCWEEQERKTK
Ga0208553_10919452	3300025109	Marine	VLIDRKIGGFMPNNPKNSEQYIQEDFYCEMCGRTTKEETELDEKLNKFLCEGCRKEQERKNK
Ga0208790_11753982	3300025118	Marine	GGFAPNKPKQSEQYVQEDFYCEMCGRTTKEETELNEKLNKYLCDGCRKEQERKNK
Ga0209434_10108988	3300025122	Marine	VLIDRKIGGFMPNKPKKEEDYIQEDFYCEMCGRTTKEETELDEKLNKFLCEGCRKEQERKNK
Ga0209434_11112762	3300025122	Marine	PNKPKKEENYVQEEFYCEMCGRVSEEETELNEKTNKFLCEGCRKEQKQKK
Ga0208919_10219145	3300025128	Marine	MTLDRKLGGFAPDNKKANEYVQQEYYCELCGRTTKEETELDDTINKYLCEGCRKEQKGKK
Ga0209756_10277681	3300025141	Marine	NRKIGGFAPNKPKQSEQYVQEDFYCEMCGRTTKEETELNEKLNKYLCDGCRKEQERKNK
Ga0209756_12296862	3300025141	Marine	MLMDRSLIGFGPNKPENSENFVQEDFYCEMCGRTTKEETILDNKLNKYLCNGCEEEQKKKEKK
Ga0207894_10698762	3300025268	Deep Ocean	MPNKPKKEENYVQEEYYCEMCGRVSEEETELNEKTNKFLCEGCRKEQKQKK
Ga0208813_10601812	3300025270	Deep Ocean	MANKPKKEENYVQEEYYCEMCGRVSEEETELNEKTNKFLCAGCLAEQERKTK
Ga0208113_10264224	3300026087	Marine	MPNKPKKTEEYIQEDFYCEMCGRTTKEETELDEKLNKYLCEGCRKEHERKKK
Ga0208317_10130051	3300026117	Marine Oceanic	MLIDRKIGGFMPNKPKNTEQYIQEDFYCEMCGRTTKEETELYEKLNKYLCEGCRKEQERKKK
Ga0207966_10575891	3300026119	Marine	MPDKPKKTERYVQEEFYCEMCGRTTKEETLLHEATTKYLCSGCWKEQERKTK
Ga0208132_10159166	3300026211	Marine	MPNNPKKEEDYIQEDFYCEMCGRTTKEETELDEKLNKYLCEGCRKEQERKNK
Ga0208132_10406613	3300026211	Marine	MPNKPKKEENYVQEEYYCEMCGRVSEEETELNEKTNKFLCAGCL
Ga0208132_10416991	3300026211	Marine	VLLNRKIGGFAPNNPKNVEQYVQEDFYCEMCGRTTKEETELNEKLNKYLCDGCRKE
Ga0208132_11120041	3300026211	Marine	KLGGFMPNKPKKEENYVQEEYYCEMCGRVSEEETELNEKTNKFLCAGCLTEQEGKTK
Ga0209554_10327963	3300027685	Marine	VLIDRKIGGFMANKPKKEEAYIQEDFYCEMCGRTTKEETELNEKLNKYLCEGCRKEQERKKK
Ga0209816_10935333	3300027704	Marine	MTFERKLGGFAPSRKTPTDYVQEEYYCELCGRTTKEETELDDKLNKYLCEGCHKEQKGKK
Ga0209815_11601022	3300027714	Marine	MPNKPKKEESYVQEEYYCEMCGRVSEEETELNEKTNKFLCAGCLTEQERKTK
Ga0209089_101698672	3300027838	Marine	MPNKPKKEEAYVQEDFYCELCGRTTKEETELDEKLNKFLCEGCRKEQKGKKK
Ga0209089_103099162	3300027838	Marine	MLLDRKMGGFMPDNRKKEESYIQEDFYCEMCSRTTKEETELDEKLNKYLCEGCRKEQERKRNEKDS
Ga0256382_10013767	3300028022	Seawater	VLLDRKLGGFAPHKPKKAAEYVQEDFYCEMCGRTTKEETILEEKLGKYLCDGCRKEYERKNK
Ga0256380_10127772	3300028039	Seawater	MPNKPKNTEQYIQEDFYCEMCGRTTKEETELDEKLNKFLCEGCRKEQERKNK
Ga0310121_100495248	3300031801	Marine	MLLDRKIGGFMPNNPKKEEDYIQEDFYCEMCGRTTKEETELNEKLNKYLCEGCRKEQERKKK
Ga0310121_100765731	3300031801	Marine	MLLDRKIGGFMPNKPKKEEAYVQEDFYCELCGRTTKEETELDEKLNKFLCEGCRKEQKGKKK
Ga0310121_101746702	3300031801	Marine	MLLDRKIGGFMPNNPKNVEQYIQEDFYCEMCGRTTKEETELDEKLNKYLCDGCRKEQERKRK
Ga0310121_102017542	3300031801	Marine	MPNKPKKEESYVQEEYYCEMCGRVSEEETELNEKTNKFLCAGCLTEQEGKTK
Ga0310121_103920192	3300031801	Marine	MLLDRKIGGFMPNNPKNVEPYIQEDFYCEMCGRTTKEETELNEKLNKYLCEGCRKEQERKKK
Ga0310121_106613422	3300031801	Marine	MLLDRKIGGFMPNNPKKEEDYIQEDFYCEMCGRTTKEETELYEKLNKYLCEGCRKEQERKKK
Ga0310123_101069573	3300031802	Marine	MPNNPKKEEAYIQEDFYCEMCGRTTKEETELYEKLNKYLCEGCRKEQEKKKK
Ga0310123_101378511	3300031802	Marine	MLIDRKLGGFMPNKPKKEESYVQEEYYCEMCGRVSEEETELNEKTNKFLCAGCLTEQEGKTK
Ga0310120_100427637	3300031803	Marine	MPNNPKNVEQYIQEDFYCEMCGRTTKEETELDEKLNKYLCDGCRKEQERKRK
Ga0310125_100559053	3300031811	Marine	MLLDRKIGGFMPNNPKNVEPYIQEDFYCEMCGRTTKEETELDEKLNKYLCEGCRKEQERKKK
Ga0315338_10444864	3300032138	Seawater	MLLDKKLGGFMPNKPKNKDEYVQQEFYCEMCGRTSKEETELDEKLSKYLCEGCRKEQEGKRK
Ga0315338_11251334	3300032138	Seawater	LINRKLGGFMPNKPKKEEDYVQQEYYCEMCGRVSEEETELNEKTNKFLCAGCLTEQEGKT
Ga0310345_100182813	3300032278	Seawater	MLLDRKIGGFMPNNPKNVEQYIQEDFYCEMCGRTTKEETELDEKLNKFLCEGCRKEQEGKRK
Ga0310345_102754225	3300032278	Seawater	MNLGRKIGGFSAAKPKKSETYTQQEFYCEMCGRTTKEETELDEKTNKFLCEGCRKEQERKTK
Ga0310345_106056551	3300032278	Seawater	MPNKPKKEENYIQEEYYCEMCGRVSEEETELNEKTNKFLCAGCLTEQEGKTK
Ga0310345_122590732	3300032278	Seawater	MLLDRKIGGFAPNNPKNKEQYVQEDFYCEMCGRTTKEETELDEKLNKYLCDGCRKEQERKNK
Ga0310342_1005473614	3300032820	Seawater	MLLNRKLGGFSPQKPKKTENYVQEEFYCEMCGRTTKEETLLHEATTKYLCSGCLEEQERKTK
Ga0310342_1012489332	3300032820	Seawater	MPNKPKKEEDYIQEDFYCEMCGRTTKEETELDEKLNKYLCEGCRKEQERKNK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062186

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences