Metagenome / Metatranscriptome Family F062244

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062244
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	66 residues
Representative Sequence	MNRKTSRRNFLGTSTGFAAAGLASLANPIAAAAQSVGVKPGDLPDLTIKEVKVYVTDISGIHKLN
Number of Associated Samples	96
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.30 %
% of genes near scaffold ends (potentially truncated)	60.31 %
% of genes from short scaffolds (< 2000 bps)	52.67 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.19

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (58.779 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog (19.847 % of family members)
Environment Ontology (ENVO)	Unclassified (54.962 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (41.985 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 45.16% β-sheet: 0.00% Coil/Unstructured: 54.84%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.19
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.19
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF13360	PQQ_2	61.83
PF01011	PQQ	9.92
PF00701	DHDPS	6.11
PF13378	MR_MLE_C	3.82
PF13570	PQQ_3	3.05
PF13442	Cytochrome_CBB3	2.29
PF00563	EAL	1.53
PF01120	Alpha_L_fucos	0.76
PF06108	DUF952	0.76
PF13561	adh_short_C2	0.76
PF12904	Collagen_bind_2	0.76
PF00295	Glyco_hydro_28	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0329	4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase	Cell wall/membrane/envelope biogenesis [M]	12.21
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	1.53
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	1.53
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	1.53
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	1.53
COG3502	Uncharacterized conserved protein, DUF952 family	Function unknown [S]	0.76
COG3669	Alpha-L-fucosidase	Carbohydrate transport and metabolism [G]	0.76
COG5434	Polygalacturonase	Carbohydrate transport and metabolism [G]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.78 %
Unclassified	root	N/A	41.22 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.78 %
Unclassified	root	N/A	41.22 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.78 %
Unclassified	root	N/A	41.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.22 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	38.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.22 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	26.72 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	11.45 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.22 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.72 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	4.58 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.29 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.22 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.72 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	3.82 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.29 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.76 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.22 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.72 %
unclassified Bryobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae	3.82 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.29 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.76 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.22 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.72 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	3.82 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.29 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.76 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001534\|A15PFW1_10343055	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	982	Open in IMG/M
3300009500\|Ga0116229_10138532	All Organisms → cellular organisms → Bacteria	2143	Open in IMG/M
3300009624\|Ga0116105_1234566	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300014151\|Ga0181539_1154073	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	914	Open in IMG/M
3300014155\|Ga0181524_10396163	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300014156\|Ga0181518_10388573	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300014158\|Ga0181521_10115947	All Organisms → cellular organisms → Bacteria	1606	Open in IMG/M
3300014160\|Ga0181517_10334587	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	788	Open in IMG/M
3300014161\|Ga0181529_10629986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300014162\|Ga0181538_10128004	All Organisms → cellular organisms → Bacteria	1473	Open in IMG/M
3300014168\|Ga0181534_11001799	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300014201\|Ga0181537_10157551	Not Available	1557	Open in IMG/M
3300014489\|Ga0182018_10433000	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	700	Open in IMG/M
3300014493\|Ga0182016_10035511	All Organisms → cellular organisms → Bacteria	4118	Open in IMG/M
3300014494\|Ga0182017_10220745	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1205	Open in IMG/M
3300014494\|Ga0182017_10552265	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300014501\|Ga0182024_10282031	All Organisms → cellular organisms → Bacteria	2207	Open in IMG/M
3300014501\|Ga0182024_10424199	Not Available	1713	Open in IMG/M
3300014655\|Ga0181516_10442498	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300014655\|Ga0181516_10677295	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300014838\|Ga0182030_10682711	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	968	Open in IMG/M
3300014839\|Ga0182027_10138278	All Organisms → cellular organisms → Bacteria	2883	Open in IMG/M
3300014839\|Ga0182027_10580100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1209	Open in IMG/M
3300014839\|Ga0182027_11869222	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300016698\|Ga0181503_1189058	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300016701\|Ga0181509_1226746	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300017988\|Ga0181520_10474229	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	891	Open in IMG/M
3300017988\|Ga0181520_10577115	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	784	Open in IMG/M
3300018002\|Ga0187868_1291937	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300018004\|Ga0187865_1067430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1381	Open in IMG/M
3300018008\|Ga0187888_1391284	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300018015\|Ga0187866_1067835	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1557	Open in IMG/M
3300018016\|Ga0187880_1381061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300018038\|Ga0187855_10911097	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300018038\|Ga0187855_10929821	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300018042\|Ga0187871_10046804	All Organisms → cellular organisms → Bacteria	2622	Open in IMG/M
3300018042\|Ga0187871_10337255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	834	Open in IMG/M
3300018046\|Ga0187851_10255114	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1026	Open in IMG/M
3300018046\|Ga0187851_10478817	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300019082\|Ga0187852_1271439	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300019787\|Ga0182031_1023797	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1822	Open in IMG/M
3300019787\|Ga0182031_1023798	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1132	Open in IMG/M
3300019787\|Ga0182031_1082931	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1796	Open in IMG/M
3300019787\|Ga0182031_1119738	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1822	Open in IMG/M
3300019787\|Ga0182031_1197878	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1805	Open in IMG/M
3300019787\|Ga0182031_1197879	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1696	Open in IMG/M
3300022524\|Ga0224534_1024153	All Organisms → cellular organisms → Bacteria	1559	Open in IMG/M
3300022524\|Ga0224534_1069707	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300024295\|Ga0224556_1013313	Not Available	2126	Open in IMG/M
3300024998\|Ga0209963_1072151	All Organisms → cellular organisms → Bacteria → Proteobacteria	709	Open in IMG/M
3300025412\|Ga0208194_1027199	All Organisms → cellular organisms → Bacteria → Acidobacteria	908	Open in IMG/M
3300025506\|Ga0208937_1060886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	874	Open in IMG/M
3300025878\|Ga0209584_10102401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1057	Open in IMG/M
3300026502\|Ga0255350_1047563	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300028653\|Ga0265323_10108126	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	914	Open in IMG/M
3300028860\|Ga0302199_1042464	Not Available	1599	Open in IMG/M
3300028874\|Ga0302155_10236385	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300029882\|Ga0311368_11125990	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300029883\|Ga0311327_10619322	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300029914\|Ga0311359_10040615	All Organisms → cellular organisms → Bacteria	5109	Open in IMG/M
3300029914\|Ga0311359_10048718	All Organisms → cellular organisms → Bacteria	4528	Open in IMG/M
3300029914\|Ga0311359_11078233	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300029951\|Ga0311371_11142204	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300029954\|Ga0311331_11459178	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300029999\|Ga0311339_10207650	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2205	Open in IMG/M
3300030044\|Ga0302281_10187658	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	877	Open in IMG/M
3300030518\|Ga0302275_10648044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300030519\|Ga0302193_10194378	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300030906\|Ga0302314_11262996	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	686	Open in IMG/M
3300031027\|Ga0302308_10344097	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	909	Open in IMG/M
3300031234\|Ga0302325_10373001	All Organisms → cellular organisms → Bacteria	2247	Open in IMG/M
3300031234\|Ga0302325_12007363	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300031234\|Ga0302325_12231018	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300031236\|Ga0302324_101827378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	771	Open in IMG/M
3300031259\|Ga0302187_10391914	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300031524\|Ga0302320_10618747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1259	Open in IMG/M
3300031788\|Ga0302319_10161195	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	2962	Open in IMG/M
3300032675\|Ga0316225_1139621	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	788	Open in IMG/M
3300033405\|Ga0326727_10234328	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1929	Open in IMG/M
3300033405\|Ga0326727_11283841	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	501	Open in IMG/M
3300033824\|Ga0334840_022124	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2067	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.71%
Host-Associated	Host-Associated	1.53%
Engineered	Engineered	0.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.73%
Aquatic	Environmental → Aquatic	41.98%
Plants	Host-Associated → Plants	1.53%
Bioremediation	Engineered → Bioremediation	0.76%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	41.98%
Peat	Environmental → Terrestrial → Peat	36.64%
Soil	Environmental → Terrestrial → Soil	19.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.76%
Peat Moss	Host-Associated → Plants → Peat Moss	0.76%
Hydrocarbon	Engineered → Bioremediation → Hydrocarbon	0.76%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	41.22%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	36.64%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	15.27%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	3.05%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.76%
Loam	Environmental → Terrestrial → Soil → Loam	0.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.76%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	0.76%
Unclassified	Engineered → Bioremediation → Hydrocarbon → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	37.40%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	36.64%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	15.27%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.82%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.29%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.76%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	0.76%
Unclassified	Engineered → Bioremediation → Hydrocarbon → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	19.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	17.56%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	13.74%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	11.45%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	6.87%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	6.11%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	5.34%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	4.58%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.82%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.29%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.53%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.76%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.76%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.76%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.76%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.76%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	0.76%
Wastewater Bioreactor	Engineered → Bioremediation → Hydrocarbon → Unclassified → Unclassified → Wastewater Bioreactor	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001534	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-PF-7A)- 1 week illumina	Environmental	Open in IMG/M
3300006949	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16B	Environmental	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016698	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016701	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016728	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018015	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300022524	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 20-24	Environmental	Open in IMG/M
3300023091	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 30-34	Environmental	Open in IMG/M
3300024295	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 1-5	Environmental	Open in IMG/M
3300024998	Wastewater bioreactor microbial communities from Cape Town, South Africa - Thiocy_cont_1000_biof (SPAdes)	Engineered	Open in IMG/M
3300025412	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 (SPAdes)	Environmental	Open in IMG/M
3300025473	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10 (SPAdes)	Environmental	Open in IMG/M
3300025506	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40 (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300026502	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T-25.r1	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300028653	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG	Host-Associated	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028860	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_3	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300028874	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_1	Environmental	Open in IMG/M
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029918	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_1	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030044	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_2	Environmental	Open in IMG/M
3300030049	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_1	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030518	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2	Environmental	Open in IMG/M
3300030519	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_3	Environmental	Open in IMG/M
3300030693	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_2	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031259	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_3	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300032675	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18015	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033818	Peat soil microbial communities from Stordalen Mire, Sweden - 713 S-3-M	Environmental	Open in IMG/M
3300033823	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S3 30-34	Environmental	Open in IMG/M
3300033824	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S2 5-9	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A15PFW1_103430553	3300001534	Permafrost	MKDQLSRRNFLGATGGFAAAAGLSALANPIGAAAQSVGVKSGDLPDLTIKEVKVYVTDTSKYHKLNSTETGQCY*
Ga0075528_100780182	3300006949	Arctic Peat Soil	LIEWEKNTLKQNLSRRTFLGTSTGFAAAGFSAVGNPIAAAAQSAGVKPG
Ga0116229_101385322	3300009500	Host-Associated	MSATTSRRNFLAASSGFTAAAFASLANPIAAAAQSVGVKSGDLPDLTIKEVKVYVTDISKIHKLNSPETGELLS
Ga0116105_12345661	3300009624	Peatland	MNSTTSRRNFLAGSTGFAAAGFATLANPIAAAAQSVDVKPGDLPDLTIKEVKVYVTDISKLHKLNSSETGEMISVVTNSGIEG
Ga0116135_10975651	3300009665	Peatland	MNWEVSRRNFLAGSVGFATLGNPIAAAAQSVGVKAGDLPDLTIKEVKVY
Ga0181539_11540732	3300014151	Bog	MNRKTSRRNFIGTSTGFAAAGLASLANPIAAAAQTAGVKPGDLPDLTIKEVKMYVTDMSGIHK
Ga0181524_103961631	3300014155	Bog	VKQNLSRRNFLGTSAGFAAAGFAAVADPIGAAAQTVGVKPGDLPDLTIKEVKIYVTDLTGVHKLNSTETGELISVVTNS
Ga0181518_101036891	3300014156	Bog	MNTTTSRRGFLAGTTGFAAAGLATLANPIAAAAQSVGVKSGDLPDLTIKEVKVY
Ga0181518_103885732	3300014156	Bog	VNQNLSRRNFLGTSAGFAAAGFAAVADPIGAAAQTVGVKPGDLPDLTIKEVKIYVTDLTGVHK
Ga0181521_101159472	3300014158	Bog	MNTTTSRRGFLAGTTGFAAAGLATLANPIAAAAQSVGVKSGDLPDLTIKEVKVYVADISKMHRLNS
Ga0181517_103345872	3300014160	Bog	LLYPGNAQEINMNPTSSRRNFLAGSTGFAAAGFAALANPIAAAAQSVEVKPGDLPDLTIKEVKVYVTDISKLHKLNSSETGELISVVTNSGI
Ga0181517_104000011	3300014160	Bog	MNRKTSRRNFIGTSTGFAAAGLASLANPIAAAAQTVGVKPGDLPDLTIKEVKVYV
Ga0181517_105206922	3300014160	Bog	VKQNLSRRSFLGTSTGFAAAGLSALANPIAAAAQTVGVKPADLPDL
Ga0181529_106299862	3300014161	Bog	MNRKTSRRNFIGTSTGFAAAGLASLANPIAAAAQTVGVKPGDLPDLTIKEVKVYVTDISKVH
Ga0181538_101280041	3300014162	Bog	MNASESRRNFLAGSTGFAVAGLATLANPIAAAAQSVDVKPGDLPDLTIKEVKVYVTDISKLHKLNSSETGELISVVTNSG
Ga0181532_106133121	3300014164	Bog	MNTTTSRRGFLAGTTGFAAAGLATLANPIAAAAQSVGVKSGDLPDLTIKEVKV
Ga0181523_101068621	3300014165	Bog	MNSTTSRRNFLAGSTGFAAAGFAALANPIATAAQSADVKPGDLPDLTIKEVKVY
Ga0181534_109691011	3300014168	Bog	MKETVSRRSFLGASAGFAAAGLSAVANPIAAAAQSVGVKPGDLPDLTIK
Ga0181534_110017991	3300014168	Bog	MNASESRRNFLAGSTGFAAAGLATLANPIAAAAQSVDVKPGDLPDLTIKEVKVYVTDISKLHKRNSSETGE
Ga0181531_103976911	3300014169	Bog	MKQNLSRRSFLGTSAGFAAAGLSAVANPIAAAAQSVGVKPADLPDLTIKE
Ga0181526_101850971	3300014200	Bog	MSQVKQNLSRRNFLGTSVGFAAAGLAAVADPIGAAAQTVGVKPGDLPDLTI
Ga0181537_101575512	3300014201	Bog	MKATTSRRNFLAGSTGFAAAGFATLANPIAAAAQSVGVKSSDLPDLTIKEVKVYVTDISKLHKLN
Ga0181537_102794731	3300014201	Bog	MNATTSRRNFLAGSTGFAAAGFAALANPIAAAAQSVDVKPGDLPDLTIKEVKV
Ga0181537_105809121	3300014201	Bog	MKTDISRRDFLGTSTGFAAAGLASLASPIAAAAQSVGVKPRDLPDLTIKEVKVYVTD
Ga0182018_104330001	3300014489	Palsa	VKQNLSRRSFLETSAGFAAAGLSAVANPIAAAAQSVGVKPGDLPDLTIKEVKVYVTDISNIHKLNSPETGELLSVVTNSG
Ga0182016_100355113	3300014493	Bog	MNRKTSRRNFLGTSTGFAAAGLASLANPIAAAAQSVGVKPGDLPDLTIKEVKVYVTDISGIHKLNSPETGELVSIVTN
Ga0182016_108501622	3300014493	Bog	MNRRKKMNETVSRRSFLGASAGFAAAGLSAVANPIAAAAQSVGVKPGDLP
Ga0182017_102207453	3300014494	Fen	MNRKTSRRNFIGTSTGFAAAGLASLANPIAAAAQTVGVKPGDLPDLTIKEVKVYVTDMSGIHKLNGSETGELISVVT
Ga0182017_105522651	3300014494	Fen	MNATTSRRGFLAASTGFAAAGLATLANPIAAAAESVGVKPGDLPDLTIKEVKVYATDISKLHRLNSSETGELI
Ga0182019_115087402	3300014498	Fen	MNTTTSRRGFLAGSTGFAAAGFAALANPIAAAAQSVGVKSGDLPDLTIK*
Ga0182024_102820311	3300014501	Permafrost	MKYRGKNQVKQNLSRRNFLETSAGFAAAGFAAIADPIGAAAQTVGVKPGDLPDLTIKEVKIYVTDMSNVHKLNSTETGELISV
Ga0182024_104241991	3300014501	Permafrost	MNATTSRRNFLAGSTGFAAAGIATLANPIAAAAQSVDVKSSDFPDLTIKEVKVYVTDISKLHKLNGSETGEL
Ga0182024_117472221	3300014501	Permafrost	MKQNLSRRSFLGTSAGFAAAGLSAVANPIAAAAQTVGVKPADLPDLTIKEVK
Ga0181525_103386082	3300014654	Bog	MKETVSRRSFLGASAGFAAAGLSAVANPIAAAAQSVGVKPGDLPDLTIKEV
Ga0181516_101247622	3300014655	Bog	MNTTTSRRTFLANSTGFAAAGFGALANPIAAAAQSVGAKPGDLPDLTIKEVKVYVTDISK
Ga0181516_104424982	3300014655	Bog	MNPTTSRRNFLAGSTGFAAAGFATLANPIAAAAQSVDVKPGDLPDLTIKEVKVYVTDISKLHKLNSSETGELI
Ga0181516_106772951	3300014655	Bog	MNRKTSRRNFLGTSTGFAAAGLASLANPIAAAAQSVGVKPGDLPDLTIKEVKVYVTDISGIHKLNSPETGEL
Ga0181522_102454001	3300014657	Bog	MKATTSRRNFLAGSTGFAAAGFATLANPIAAAAQSVGVKPSDLPDLTIKE
Ga0182030_106827112	3300014838	Bog	MEMNAKTSRRKFLASSTGFAAAGFAAIANPIAAAAQSVDVKPGDLPDLTIKEVKVYVTDISNVHKLNGSETGELISVVT
Ga0182027_101382784	3300014839	Fen	MNIKTSRRGFLASSTGFAAAGLASLANPIGAAAQSVGVKSGDLPDLTIKEVKVYVADISKMHRLN
Ga0182027_105801002	3300014839	Fen	MNTKTSRRGFLASSTGFAAAGLASLANPIGAAAQSVGVKAGDLPDLTIKEVKVYVTDISKLHRLNSSE
Ga0182027_118692222	3300014839	Fen	VHEQEKENEMDPKTSRRGFLAGTTGFAAVGLASLANPIGAAAQSVGVKAGDLPDLTIKEVKVYVTDISKLHRLNSSETGELISIVTNSGI
Ga0181503_11890582	3300016698	Peatland	VKQNLSRRNFLGTSAGFAAAGLAAVADPIGAAAQTVGVKPGDLPDLTIKEVKIYVTDLTGIHKLNS
Ga0181509_12267462	3300016701	Peatland	MNTTTRRGFLTGTTGFAAAGFAALANPIAAAAQSVGVKSGDLPDLTIKEVKVYVADISKMHRLNS
Ga0181500_15782902	3300016728	Peatland	MNATTSRRNFLAGSAGIAATGFATLANPIAAAAQSVGAKPGDLPDLTIKEV
Ga0187848_104445362	3300017935	Peatland	MNRKTSRRNFLGTSTGFAAAGLASLANPIAAAAQTAGVKPGDLPDLTIKEV
Ga0187850_102569901	3300017941	Peatland	MNRKTSRRNFIGTSTGFAAAGLASLANPIAAAAQTVGVKPGDLPDLTIKEVK
Ga0181520_104742292	3300017988	Bog	MSQVKQNLSRRNFLGTSVGFAAAGLAAVADPIGAAAQTVGVKPGDLPDLTIKEVKIYVTDLTGVRKLNSTE
Ga0181520_105771152	3300017988	Bog	MNSTTSRRNFLAGSTGFAAAGFATLANPIAAAAQSVDVKPGDLPDLTIKEVKVYVTDISKLHKLNSSETGE
Ga0187868_12919371	3300018002	Peatland	MNRKTSRRNFLGTSTGFAAAGLASLANPIAAAAQTAGVKPGDLPDLTIKEVKMYVTDMSGIH
Ga0187865_10674301	3300018004	Peatland	MNRKTSRRNFLGTSTGFAAAGLASLANPIAAAAQTAGVKPGDLPDLTIKEVKMYVTDMSGIHKLN
Ga0187888_13912841	3300018008	Peatland	VKQNLSRRNFLGTSAGFAAAGLAAVADPIGAAAQTVGVKPGDLPVLTIKEVKIYVTDLTGVHKLNSTETGEL
Ga0187866_10678352	3300018015	Peatland	MNRKTSRRNFLGTSTGFAAAGLASLANPIAAAAQTAGVKPGDLPDLTIKEVKMYVTDMSGIHKLNGTE
Ga0187880_13810612	3300018016	Peatland	MNRKTSRRNFLGTSTGFAAAGLASLANPIAAAAQTAGVKPGDLPDLTIKEVKMYVTDMSGIHKLNGT
Ga0187857_105502721	3300018026	Peatland	MNSITSRRNFLAGSTGFAAAGFAALANPIAAAAQAVDVKPTDLPDLTIKEVKVY
Ga0187863_103502512	3300018034	Peatland	MNASESRRNFLAGSTGFAAAGLATLANPIAAAAQSVDVKPGDLPDLTIKEVKVYVTDIS
Ga0187875_102770251	3300018035	Peatland	MNASESRRNFLAGSTGFAVAGLATLANPIAAAAQSVDVKPGDLPDLTIKEVKVYVTDIS
Ga0187855_102598701	3300018038	Peatland	MNPTTSRRNFLAGSTGFAAAGFAALANPIATAAQSVGVKSGDLPDLTIKEV
Ga0187855_109110972	3300018038	Peatland	MNSTTSRRNFLAGSTGFAAAGFATLANPIAAAAQSVDVKPGDLPDLTIKEVKVYVTDISKLHKLNGSETGELI
Ga0187855_109298212	3300018038	Peatland	MNRKTSRRNFLGTSTGFAAAGLASLANPIAAAAQSVGVKPGDLPDLTIKEVKVYVTDISGIHKLNSPE
Ga0187871_100468042	3300018042	Peatland	MNSTTSRRNFLAGSTGFAAAGFATLANPIAAAAQSVDVKPGDLPDLTIKEVKVYVTDISKLHKLNSSETGEMISVVTN
Ga0187871_103372551	3300018042	Peatland	MNASESRRNFLAGSTGFAVAGLATLANPIAAAAQSVDVKPGDLPDLTIKEVKVYVTDISKLHKLNSSETGELIS
Ga0187887_109610281	3300018043	Peatland	MNASESRRNFLAGSTGFAAAGLATLANPIAAAAQSVDVKPGDLPDLTIKEVKV
Ga0187851_102551141	3300018046	Peatland	MNPTTSRRNFLAGSTGFAAAGFATLANPISAAAQSVGVKPGDLPDLTIKEVKVYVADLSSFRRLNPTETGEIVSVVTNSGHEG
Ga0187851_104788172	3300018046	Peatland	MNSITSRRNFLAGSTGFAAAGFAALANPIAAAAQSVDVKPTDLPDLTIKEVKVYVTDISKLHKL
Ga0187852_11087772	3300019082	Peatland	MNRKTSRRNFIGTSTGFAAAGLASLANPIAAAAQTVGVKPGDLPDLTIKEIKVYVTDMTGIH
Ga0187852_12714391	3300019082	Peatland	MNPTTSRRNFLAGSTGFAAAGFAALANPIAAAAQSMDVKPGDLPDLTIKEVKVYVTDISKLHKLNGSET
Ga0182031_10237971	3300019787	Bog	VKENVSRRSFLGASAGFAAAGLSAVANPIAAAAQSVGVKPGDLPDLTIKEVKVYVTDISQVHKLNSLE
Ga0182031_10237982	3300019787	Bog	VKENVSRRSFLGASAGFAAAGLSAVANPIAAAAQSVGVKPGDLPDLTIKEVKVYVTDISQVRKLNSLE
Ga0182031_10829311	3300019787	Bog	VKENVSRRSFLGASAGFAAAGLSAVANPIAAAAQSVGVKPGDLPDLTIKEVKVYVTDISQVHTS
Ga0182031_11197381	3300019787	Bog	VKENVSRRSFLGASAGFAAAGLSAVANPIAAAAQSVGVKPGDLPDLTIKEVKVYVTDISQVHKLNSLESGE
Ga0182031_11978781	3300019787	Bog	VKENVSRRSFLGASAGFAAAGLSAVANPIAAAAQSVGVKPGDLPDLTIKEVKVYVTDISQVHKLNSKLNSL
Ga0182031_11978792	3300019787	Bog	VKENVSRRSFLGASAGFAAAGLSAVANPIAAAAQSVGVKPGDLPDLTIKEVKVYVTDISQVRKLNSL
Ga0182028_14679032	3300019788	Fen	MNRKTSRRNFIGTSTGFAAAGLASLANPIAAAAQTVGVKPGDLPDLTIKESRSMSRT
Ga0224534_10241532	3300022524	Soil	MNRKTSRRNFLGTSTGFAAAGLASLANPIAAAAQSVGVKPGDLPDLTIKEVKVYVTDISGIHKLNSPETGELLSIVTNSGIEG
Ga0224534_10697072	3300022524	Soil	VKQNLSRRSFLGTSAGFAAAGFSAMANPIGAAAQSVGVKPGDLPDLTIKEVKVYVTDISNIHKLNSPETGELLSIVTNSGIEG
Ga0224559_10086163	3300023091	Soil	MNRKTSRRNFIGTSTGFAAAGLASLANPIAAAAQSVGVKPGDLPDLTIKEVKVYVTDISGIH
Ga0224556_10133131	3300024295	Soil	MNATTSRRNFLAGSTGFAAAGFATLANPIAAAAQSVDVKPTDLPDLTIKEVKVYVTDISKLHKL
Ga0209963_10721511	3300024998	Wastewater Bioreactor	MSKLFRASRRDFLSRSSLLAGGAGLALADPGAAAAEAVGVKTGDLPDLTIKEVKVYVTDLTGYRSLNGERGE
Ga0208194_10271991	3300025412	Peatland	MNASESRRNFLAGSTGFAVAGLATLANPIAAAAQSVDVKPGDLPDLTIKEVKVYVTDISKLHKLNSSETGELISVVTNSGVEGNYT
Ga0208190_10968562	3300025473	Peatland	MNRKTSRRNFLGTSTGFAAAGLASLANPIAAAAQSVGVKPGDLPDLTIKEVKVYVTDISGIH
Ga0208937_10608862	3300025506	Peatland	MNRKTSRRNFLGTSTGFAAAGLASLANPIAAAAQTAGVKPGDLPDLTIKEVKMYVTDMSGIHKLNGTETGELISVVTNSGIEGN
Ga0209584_101024012	3300025878	Arctic Peat Soil	MNRKTSRRNFLGTSTGFAAAGLASLANPIAAAAQSVGVKPRDLPDLTIKEVKVYVTDISGIHKLNSPETGELLSIVTNSGIE
Ga0255350_10475631	3300026502	Soil	MNATTSRRNFLAGSTGFAAAGFAALANPIAAAAQSVDVKPGDLPDLTIKEVKVYVTDISKLHKLNSSE
Ga0209169_106525732	3300027879	Soil	VKAKTSRRDFLGGSAALTAVGAASGFAALADPIGAAAQSVGVKPGDLPDLTIKEVKVYIT
Ga0265323_101081261	3300028653	Rhizosphere	MNATTSRRGFLAASTGFAAAGLATLANPIAAAAESVGVKPGDLPDLTIKEVKVYATDISKLHRLNSSETGELISVVTHSG
Ga0302231_103630842	3300028775	Palsa	VKQNLSRRSFLGTSAGFAAAGLGAVANPIAAAAQSVGVKPGDLPDLTIKEVK
Ga0302199_10424642	3300028860	Bog	MKTNPSRRNFLAASTGFAAAGFASLANPIAAAAQSVGVKSPDLPDLTIKEVKVYVADISKIHKLNSPETGE
Ga0302197_105307931	3300028873	Bog	MNPTTSRRNFLAGSTGFAAAGFATLANPIAAAAQSVDVKPGDLPDLTIKEVKVYVTDI
Ga0302155_102363852	3300028874	Bog	MKQKPSRRDFLGKSGGMAVAAGFAALADPIGAAAQSVGVKSADLPDLTIKEVKVYITDLGSYRSLNGERGELISVVTAGGIE
Ga0302154_102978341	3300028882	Bog	MNRKTSRRNFLGTSTGFAAAGLASLANPIAAAAQSVGVKPGDLPDLTIKEVKVY
Ga0311368_111259901	3300029882	Palsa	VKQNLSRRSFLGTSAGFAAAGLGAVANPIAAAAQSVGVKPGDLPDLTIKEVKVYVTDISDIHKLNSPE
Ga0311327_106193221	3300029883	Bog	MKQKPSRRDFLGKSGGMAVAAGFAALADPIGAAAQSVGVKSADLPDLTIKEVKVYITDLGSYRSLNGERGELISV
Ga0311329_109986512	3300029907	Bog	MNWEVSRRNFLAGSVGFAALGNPIAAAAQSVGVKAGDLPDLTIKEVKVYVT
Ga0311359_100406151	3300029914	Bog	MNRKTSRRNFIGTSTGFAAAGLASLANPIAAAAQSVGVKPGDLPDLTIKEVKVYVTDISGIHKLNSPETGELVSIVTNS
Ga0311359_100487183	3300029914	Bog	MNRKTSRRNFLGTSTGFAAAGLASLANPIAAAAQSVGVKPGDLPDLTIKEVKVYVTDISGIHKLNSPETGELVSIVTNS
Ga0311359_110782332	3300029914	Bog	MNIHPSRRSFLTASTGFAAASLASLANPIAAAAQSVGVKSADLPDLTIQEVKVYVADISKIHKLNSPETGEILSVVTNSGIE
Ga0302143_10762592	3300029918	Bog	MKQKPSRRDFLGKSGGMAVAAGFAALADPIGAAAQSVGVKSADLPDLTIKEVKVY
Ga0311371_108958841	3300029951	Palsa	VKQKLSRRNFLGSSSGFAAVGFSALANPIAAAAQSVGVKPGDLPDLTIKEVKVYV
Ga0311371_111422042	3300029951	Palsa	MNWEGSRRNFLAGSVGFAALGNPIAAAAQSVGVKAGDLPDLTIKEVKVYVTDLGNYRSLNGETGELFSVVTNG
Ga0311371_116242111	3300029951	Palsa	MNAKTSRRDFLGASTGFAAAGLASLANPIAAAAQSVGVKPADLPDLTIKEVKV
Ga0311331_114591781	3300029954	Bog	VILREREVERETTVSETLSRRAFLGSSAGFAATGVAAALANPIGATAQSVGVKPGDLPDLTIKEVKVYVTDISKIHKLNSPETGELLSVV
Ga0311339_102076503	3300029999	Palsa	VKRQISRRNFLGASAGFAAAGLTLGANPVASAAQSAGVKPGDLPDLTIKEVKVYVTDLGNYHSL
Ga0302281_101876582	3300030044	Fen	MNRKTSRRNFLGTSTGFAAAGLASLANPIAAAAQSVGVKPGDLPDLTIKEVKVYVTDISGIHKLN
Ga0302191_101054782	3300030049	Bog	MNATTSRRNFLAGSTGFAAAGFAALANPIAAAAQSVDVKPGDLPDLTIKEVKVY
Ga0311370_101880091	3300030503	Palsa	MNWEVSRRNFLAGSVGFAALGNPIAAAAQSVGVKAGDLPDLTIKEVKVYVTD
Ga0302275_106480441	3300030518	Bog	MKAKTSRRDILRASTGFAAGFAALVNPIAAAAQSVGVKPADLPDLTIKEVKVYVTDLGKYHSLNGERGELISVVT
Ga0302193_101943781	3300030519	Bog	MKTNPSRRNFLAASTGFAAAGFASLANPIAAAAQSVGVKSPDLPDLTIKEVKVYVADISKIHKLNSPE
Ga0302313_104132251	3300030693	Palsa	VKQKLSRRNFLGSSSGFAAVGFSALANPIAAAAQSVGVKPGDLPDLTIKEVKVYVTDISK
Ga0310038_100077115	3300030707	Peatlands Soil	MNPTTSRRNFLAGSTGFAAAGFAALANPIAVAVQAVDVKPGDLPDLTIKEVKVYV
Ga0302314_112629962	3300030906	Palsa	MSATTTRRNFLGASTGFAAAGFASLANPIAAAAQSVGVKPADLPDLTIKEVKVYVTDISKIHKLNSPETGEL
Ga0302308_103440972	3300031027	Palsa	MKTKKTNISRRNFLETSTGFAAAGLASLANPIGAAAQSVGVKPADLPDLTIKEVKVYVTDISKIHKLNSPETGELLSVV
Ga0302325_103730012	3300031234	Palsa	VKQKLSRRNFLGSSSGFAAVGFSALANPIAAAAQSVGVKPGDLPDLTIKEVKVYVTDISKIHKLNSPETGELLSVVTNSGI
Ga0302325_120073631	3300031234	Palsa	MSPTTSRRNFLAASSGFAAAAFGSLADPIAAAAQSVGVKPGDLPDLTIKEVKVYVTDISKVHKLNSPETGELLSIVTHSGIEGN
Ga0302325_122310181	3300031234	Palsa	MKNPSRRSFLGNSAGFAAAGFASAVANPIGAAAQSVGVKPGDLPDLTIKEVKVYVTDISKVHKLNS
Ga0302324_1018273782	3300031236	Palsa	VKQKLSRRNFLGSSSGFAAVGFSALANPIAAAAQSVGVKPGDLPDLTIKEVKVYVTDISKIHKLNSPETGELLSVVTNSGIEGN
Ga0302187_103919141	3300031259	Bog	MKQKPSRRDFLGKSGGMAVAAGFAALADPIGAAAQSVGVKSADLPDLTIKEVKVYITDLGSYRSLNGERGELISVVTA
Ga0302320_106187472	3300031524	Bog	MNRKTSRRNFIGTSTGFAAAGLASLANPIAAAAQSVGVKPGDLPDLTIKEVKVYVTDISGIHKLNSPETGELV
Ga0302320_106852272	3300031524	Bog	MKTNKTNISRRNFLGTSTGFAAAGLASLANPIAAAAQSVGVKPADLPDLTIKE
Ga0302326_102178871	3300031525	Palsa	MNPNTSRRDFLATSTGFAAAGLASLANPIAAAAQTVGVKPGDLPDLTIK
Ga0302319_101611953	3300031788	Bog	MKAKTSRRDILRASTGFAAGFAALVNPIAAAAQSVGVKPADLPDLTIKEVKVYVTDLGKYHSLNGERGELI
Ga0316225_11396211	3300032675	Freshwater	MNRTTSRRNFIGASTGFAAAGLASLANPIAAAAQTVGVKPRDLPDLTIREVKVYVTDISNIHKLNSPETGELLSIVT
Ga0326728_108913322	3300033402	Peat Soil	MNPTTTRRDFLAGSAGFATAGFASLANPIAAAAQSVGVKAGDLPDLTIKEVKVYVT
Ga0326727_102343281	3300033405	Peat Soil	MNPTTSRRNFLAGSTGIAAAGFAALANPIAAAAQSVDVKPGDLPDLTIKEVKVYVTDISKLHK
Ga0326727_112838411	3300033405	Peat Soil	MNRKTSRRNFIGTSTGFAAAGLASLANPIAAAAQTAGVKPADLPDLTIKEIKVYVTDMTGIHKLNGSE
Ga0334804_086086_647_835	3300033818	Soil	MNRKTSRRNFIGTSTGFAAAGLASLANPIAAAAQSVGVKPGDLPDLTIKEVKVYVTDISGIHK
Ga0334837_083421_520_696	3300033823	Soil	VKENVSRRSFLGASAGFAAAGLSAVANPIAAAAQSVGVKPGDLPDLTIKEVKVYVTDIS
Ga0334840_022124_1849_2067	3300033824	Soil	VKENVSRRSFLGASAGFAAAGLSAVANPIAAAAQSVGVKPGDLPDLTIKEVKVYVTDISQVHKLNSPESGELL
Ga0371487_0113952_1249_1398	3300033982	Peat Soil	MNKTSRRGFLASSTGFAAAGLATLANPIAAAAESVGVKAGDLPDLTIKEV
Ga0371487_0342789_2_166	3300033982	Peat Soil	MNPTTSRRNFLAGSTGFAAAGFAALANPIAAAAQSVDVKPGDLPDLTIKEVKVYV
Ga0326724_0683981_2_175	3300034091	Peat Soil	MNPKTSRRNFLASSTGFAAAGLAALANPATAAAQSVGIKSGDLPDLTIKEVKVYVADI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062244

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences