Metagenome / Metatranscriptome Family F062266

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062266
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	47 residues
Representative Sequence	DDQLAKSGTVFTDAPPMTAEQLIMLGLLGHIDEHMGSIRKTVGM
Number of Associated Samples	120
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.29 %
% of genes near scaffold ends (potentially truncated)	96.95 %
% of genes from short scaffolds (< 2000 bps)	92.37 %
Associated GOLD sequencing projects	114
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.473 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil (16.794 % of family members)
Environment Ontology (ENVO)	Unclassified (35.115 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.748 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.50% β-sheet: 0.00% Coil/Unstructured: 62.50%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF03795	YCII	9.16
PF00903	Glyoxalase	8.40
PF00199	Catalase	4.58
PF00144	Beta-lactamase	3.82
PF01925	TauE	2.29
PF13564	DoxX_2	2.29
PF00496	SBP_bac_5	2.29
PF07690	MFS_1	2.29
PF00072	Response_reg	1.53
PF11066	DUF2867	1.53
PF00696	AA_kinase	1.53
PF13229	Beta_helix	1.53
PF00497	SBP_bac_3	0.76
PF08281	Sigma70_r4_2	0.76
PF02775	TPP_enzyme_C	0.76
PF13602	ADH_zinc_N_2	0.76
PF06983	3-dmu-9_3-mt	0.76
PF01223	Endonuclease_NS	0.76
PF00378	ECH_1	0.76
PF00067	p450	0.76
PF05988	DUF899	0.76
PF03358	FMN_red	0.76
PF12681	Glyoxalase_2	0.76
PF13683	rve_3	0.76
PF11716	MDMPI_N	0.76
PF05448	AXE1	0.76
PF14248	DUF4345	0.76
PF02012	BNR	0.76
PF05231	MASE1	0.76
PF01810	LysE	0.76
PF10041	DUF2277	0.76
PF00106	adh_short	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	9.16
COG0753	Catalase	Inorganic ion transport and metabolism [P]	4.58
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	3.82
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	3.82
COG2367	Beta-lactamase class A	Defense mechanisms [V]	3.82
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	2.29
COG0642	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.76
COG1506	Dipeptidyl aminopeptidase/acylaminoacyl peptidase	Amino acid transport and metabolism [E]	0.76
COG1864	DNA/RNA endonuclease G, NUC1	Nucleotide transport and metabolism [F]	0.76
COG2124	Cytochrome P450	Defense mechanisms [V]	0.76
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	0.76
COG3447	Integral membrane sensor domain MASE1	Signal transduction mechanisms [T]	0.76
COG3458	Cephalosporin-C deacetylase or related acetyl esterase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.76
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.76
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	0.76
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.47 %
Unclassified	root	N/A	1.53 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.47 %
Unclassified	root	N/A	1.53 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.47 %
Unclassified	root	N/A	1.53 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	22.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.87 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.05 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.53 %
Unclassified	root	N/A	1.53 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	22.90 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.05 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.53 %
Unclassified	root	N/A	1.53 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %
Candidatus Muproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Muproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	22.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.05 %
Thermomicrobia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia	1.53 %
Unclassified	root	N/A	1.53 %
Candidatus Muproteobacteria bacterium RBG_16_62_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Muproteobacteria → Candidatus Muproteobacteria bacterium RBG_16_62_13	0.76 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.76 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	22.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.05 %
Thermomicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales	1.53 %
Unclassified	root	N/A	1.53 %
unclassified Xanthomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales	0.76 %
Candidatus Muproteobacteria bacterium RBG_16_62_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Muproteobacteria → Candidatus Muproteobacteria bacterium RBG_16_62_13	0.76 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	22.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.05 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples	1.53 %
Unclassified	root	N/A	1.53 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.76 %
Candidatus Muproteobacteria bacterium RBG_16_62_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Muproteobacteria → Candidatus Muproteobacteria bacterium RBG_16_62_13	0.76 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	22.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.05 %
uncultured Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	1.53 %
Unclassified	root	N/A	1.53 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.76 %
Candidatus Muproteobacteria bacterium RBG_16_62_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Muproteobacteria → Candidatus Muproteobacteria bacterium RBG_16_62_13	0.76 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001431\|F14TB_100557422	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	556	Open in IMG/M
3300002561\|JGI25384J37096_10140049	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300005172\|Ga0066683_10325421	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300005172\|Ga0066683_10833063	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300005176\|Ga0066679_11044780	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300005177\|Ga0066690_10763372	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300005180\|Ga0066685_10589512	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300005180\|Ga0066685_10837851	All Organisms → cellular organisms → Bacteria → Proteobacteria	620	Open in IMG/M
3300005353\|Ga0070669_100166616	All Organisms → cellular organisms → Bacteria → Proteobacteria	1715	Open in IMG/M
3300005438\|Ga0070701_10848273	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300005439\|Ga0070711_100470227	All Organisms → cellular organisms → Bacteria → Proteobacteria	1032	Open in IMG/M
3300005459\|Ga0068867_102036061	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300005459\|Ga0068867_102369701	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	505	Open in IMG/M
3300005467\|Ga0070706_101878804	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300005471\|Ga0070698_100871585	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300005546\|Ga0070696_100332337	All Organisms → cellular organisms → Bacteria → Proteobacteria	1172	Open in IMG/M
3300005555\|Ga0066692_10825512	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300005557\|Ga0066704_10911105	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	543	Open in IMG/M
3300005559\|Ga0066700_10188835	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1418	Open in IMG/M
3300005568\|Ga0066703_10871377	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	514	Open in IMG/M
3300005569\|Ga0066705_10716131	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300005586\|Ga0066691_10636897	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300005615\|Ga0070702_101702974	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300005617\|Ga0068859_100163864	All Organisms → cellular organisms → Bacteria	2302	Open in IMG/M
3300005617\|Ga0068859_100879180	Not Available	981	Open in IMG/M
3300005829\|Ga0074479_10778536	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300005841\|Ga0068863_101808008	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300005843\|Ga0068860_101484426	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300005878\|Ga0075297_1005735	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300005981\|Ga0081538_10125098	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300006031\|Ga0066651_10200859	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1055	Open in IMG/M
3300006049\|Ga0075417_10316980	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	759	Open in IMG/M
3300006791\|Ga0066653_10531463	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300006800\|Ga0066660_10420122	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1109	Open in IMG/M
3300006845\|Ga0075421_101422428	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	762	Open in IMG/M
3300006854\|Ga0075425_100851237	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1044	Open in IMG/M
3300006881\|Ga0068865_101106139	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300007255\|Ga0099791_10013261	All Organisms → cellular organisms → Bacteria	3476	Open in IMG/M
3300009038\|Ga0099829_10870182	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300009089\|Ga0099828_11967246	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300009090\|Ga0099827_10319823	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300009090\|Ga0099827_11696191	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300009094\|Ga0111539_12447111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	606	Open in IMG/M
3300009137\|Ga0066709_103228733	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	594	Open in IMG/M
3300009156\|Ga0111538_11629326	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300009157\|Ga0105092_10290067	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300009813\|Ga0105057_1052751	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300009815\|Ga0105070_1034158	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	917	Open in IMG/M
3300009818\|Ga0105072_1131351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	518	Open in IMG/M
3300010029\|Ga0105074_1106597	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300010043\|Ga0126380_12022841	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300010047\|Ga0126382_10167028	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1527	Open in IMG/M
3300010102\|Ga0127453_1117251	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300010117\|Ga0127449_1056055	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300010303\|Ga0134082_10083435	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1253	Open in IMG/M
3300010304\|Ga0134088_10651262	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300010320\|Ga0134109_10078199	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1129	Open in IMG/M
3300010329\|Ga0134111_10093623	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300010403\|Ga0134123_13558781	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300011269\|Ga0137392_10351113	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300011417\|Ga0137326_1105870	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300012200\|Ga0137382_10658137	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	750	Open in IMG/M
3300012362\|Ga0137361_11620508	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300012396\|Ga0134057_1188040	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300012397\|Ga0134056_1069994	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300012397\|Ga0134056_1102946	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300012400\|Ga0134048_1277470	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300012403\|Ga0134049_1333999	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300012407\|Ga0134050_1161317	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300012410\|Ga0134060_1015159	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300012925\|Ga0137419_10004273	All Organisms → cellular organisms → Bacteria → Proteobacteria	6980	Open in IMG/M
3300012925\|Ga0137419_10131543	All Organisms → cellular organisms → Bacteria	1782	Open in IMG/M
3300012929\|Ga0137404_11472123	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300012930\|Ga0137407_10096964	All Organisms → cellular organisms → Bacteria	2518	Open in IMG/M
3300012931\|Ga0153915_12750098	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	575	Open in IMG/M
3300012944\|Ga0137410_11028052	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300012964\|Ga0153916_12739625	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300012972\|Ga0134077_10255425	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	726	Open in IMG/M
3300012975\|Ga0134110_10474971	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	565	Open in IMG/M
3300012976\|Ga0134076_10477190	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	566	Open in IMG/M
3300014154\|Ga0134075_10325515	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300014166\|Ga0134079_10654181	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300014320\|Ga0075342_1205694	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300015358\|Ga0134089_10006256	All Organisms → cellular organisms → Bacteria	3651	Open in IMG/M
3300015359\|Ga0134085_10536149	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	538	Open in IMG/M
3300016341\|Ga0182035_10165858	All Organisms → cellular organisms → Bacteria	1714	Open in IMG/M
3300016371\|Ga0182034_11166776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Muproteobacteria → Candidatus Muproteobacteria bacterium RBG_16_62_13	669	Open in IMG/M
3300017657\|Ga0134074_1312718	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300017659\|Ga0134083_10477429	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	555	Open in IMG/M
3300018052\|Ga0184638_1289524	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300018059\|Ga0184615_10188066	All Organisms → cellular organisms → Bacteria	1163	Open in IMG/M
3300018071\|Ga0184618_10373124	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300018074\|Ga0184640_10475412	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300018076\|Ga0184609_10558855	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	516	Open in IMG/M
3300018078\|Ga0184612_10200608	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300018431\|Ga0066655_10613128	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300018468\|Ga0066662_11024146	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	819	Open in IMG/M
3300019279\|Ga0184642_1043954	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300019356\|Ga0173481_10697846	Not Available	548	Open in IMG/M
3300019377\|Ga0190264_10101183	All Organisms → cellular organisms → Bacteria	1353	Open in IMG/M
3300020170\|Ga0179594_10288754	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300020170\|Ga0179594_10289272	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	620	Open in IMG/M
3300023266\|Ga0247789_1093856	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300025569\|Ga0210073_1087749	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300025922\|Ga0207646_11593841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	563	Open in IMG/M
3300025922\|Ga0207646_11780702	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300026089\|Ga0207648_10267348	All Organisms → cellular organisms → Bacteria	1527	Open in IMG/M
3300026089\|Ga0207648_11976427	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300026298\|Ga0209236_1175476	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300026333\|Ga0209158_1006779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5999	Open in IMG/M
3300026335\|Ga0209804_1338074	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300026540\|Ga0209376_1334744	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	577	Open in IMG/M
3300026552\|Ga0209577_10150821	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1828	Open in IMG/M
3300026557\|Ga0179587_10371927	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300027324\|Ga0209845_1074217	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300027384\|Ga0209854_1000903	All Organisms → cellular organisms → Bacteria	4174	Open in IMG/M
3300027862\|Ga0209701_10482255	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	677	Open in IMG/M
3300027873\|Ga0209814_10236323	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	791	Open in IMG/M
3300027877\|Ga0209293_10766697	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300027954\|Ga0209859_1023292	All Organisms → cellular organisms → Bacteria	1072	Open in IMG/M
3300028828\|Ga0307312_11100220	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300028889\|Ga0247827_10170163	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300031908\|Ga0310900_11825330	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300031944\|Ga0310884_10787741	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	581	Open in IMG/M
3300031965\|Ga0326597_10114712	All Organisms → cellular organisms → Bacteria	3263	Open in IMG/M
3300032180\|Ga0307471_103598064	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	548	Open in IMG/M
3300032205\|Ga0307472_102613839	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300032828\|Ga0335080_10127188	All Organisms → cellular organisms → Bacteria → Proteobacteria	2828	Open in IMG/M
3300033433\|Ga0326726_10076220	All Organisms → cellular organisms → Bacteria	2965	Open in IMG/M
3300033433\|Ga0326726_11443401	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300033486\|Ga0316624_11460500	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.02%
Host-Associated	Host-Associated	12.98%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.34%
Plants	Host-Associated → Plants	12.98%
Aquatic	Environmental → Aquatic	10.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.87%
Sediment	Environmental → Aquatic → Sediment	6.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.34%
Freshwater	Environmental → Aquatic → Freshwater	3.82%
Peat	Environmental → Terrestrial → Peat	1.53%
Marine	Environmental → Aquatic → Marine	0.76%
Roots	Host-Associated → Plants → Roots	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.54%
Loam	Environmental → Terrestrial → Soil → Loam	6.87%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.11%
Sand	Environmental → Terrestrial → Soil → Sand	5.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.58%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.05%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.29%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.53%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.53%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.76%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.11%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.11%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	5.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.58%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.05%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.05%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.29%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.29%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.53%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.53%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.76%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.76%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.76%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	16.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	14.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.11%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	5.34%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.58%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.58%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.05%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.29%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.53%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.53%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.53%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.53%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.76%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.76%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.76%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.76%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.76%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.76%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.76%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.76%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005878	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_104	Environmental	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009813	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010102	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010117	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011417	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT500_2	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012396	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012397	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012400	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012403	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012407	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012410	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014320	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300023266	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S220-509R-4	Environmental	Open in IMG/M
3300025569	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027324	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027384	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027954	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60 (SPAdes)	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TB_1005574223	3300001431	Soil	TAVLHGLDDDQLAKTGTVFTDLPPMTAEQLVMLGLLGHIDDHMGSIRRTIGG*
JGI25384J37096_101400491	3300002561	Grasslands Soil	DQLAKSGTVFTDAPPMTAEQLIMLGLLGHIDEHIGSIRRTVGM*
Ga0066683_103254213	3300005172	Soil	AKSGTVFTDAPPMTAEQLIMLGLLGHIDEHMGSIRKTVGM*
Ga0066683_108330631	3300005172	Soil	AFAVVRGLNDDQLAKSGTVFTDAPSVTAEQLIMLGLLGHIDDHMGSIRKTVGM*
Ga0066679_110447801	3300005176	Soil	AVVRGLSDEQLAKSGTVFTDAPPMTAERLVTAGLLNHIDEHIGSIRKTVGL*
Ga0066690_107633722	3300005177	Soil	GLSDDQLAKSGTVFTDAPPMTAEQLIMLGLLGHIDEHIGSIRRTVGM*
Ga0066685_105895122	3300005180	Soil	GLNDDQLAKSGTVFTDAPPMTAEQLIMLGLLGHIDEHMGSIRKTVGM*
Ga0066685_108378512	3300005180	Soil	LAKSVTVFADAPPMTVEQLVMAGLLNHVDEHIGSIRKTAGG*
Ga0070669_1001666164	3300005353	Switchgrass Rhizosphere	AAAAVVRGLTDDQLAKSGTVFTDAPPMTAEQLITRGLIIHIDEHVGSIRKAVGH*
Ga0070701_108482732	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	TDEQLTKSGTVFTDAPPMTAEQLINRGLIVHIDEHVGSIRKAVGH*
Ga0070711_1004702271	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	ALHEKGVKAAAAVVRGLDDSQLDNSGTVFTGAPPMTCLQAIDGALINHIDEHMGSIHKTVGA*
Ga0068867_1020360612	3300005459	Miscanthus Rhizosphere	DDQLAKSGTVFTDAPPMTAEQLITRGLIIHIDEHVGSIRKAVGH*
Ga0068867_1023697012	3300005459	Miscanthus Rhizosphere	KSGTVFTDTPPMTAEQLINLGLLSHIDEHMGSIRTTVGM*
Ga0070706_1018788042	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	LAKSGTVFTGLPPMTAEQLITRGLLNHVDEHFGSIRQTVAHPTRG*
Ga0070698_1008715851	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	LTDDQLAKSGTVFTDAPPMTAEQLITRGLIIHIDEHIGSIRKAVGH*
Ga0070696_1003323373	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	KSGTVFTDAPPMTAEQLITRGLIIHIDEHIGSIRKAVGH*
Ga0066692_108255121	3300005555	Soil	NDDQLAKSGTVFTDAPPMTAEQLIMLGLLGHIDEHMGSIQKTVGM*
Ga0066704_109111051	3300005557	Soil	DQLAKSGTVFTDVSPMTAEQLIVLGLLGHIDDHMGSIRKTIGM*
Ga0066700_101888351	3300005559	Soil	GTVFTDAPPMTAEQLVMRGLIAHIDEHVGSIRKTVGP*
Ga0066703_108713772	3300005568	Soil	AATAFAVVRGLNDDQLAKSGTVFTDVSPMTAEQLILLGLLGHIDDHMGSIRKTIGM*
Ga0066705_107161312	3300005569	Soil	GKAFAVVQGLSDDQLAKSGTVFTDAPRMTAEQLIMLGLVGHIDDHMGSIRKTIGM*
Ga0066691_106368972	3300005586	Soil	GLSDDQLAKSGTVFTDAPPMTAEQLIMLGLLGHIDEHMGSIRRTVGM*
Ga0070702_1017029742	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	SVIRGLSDDQLAQTGTVFSELPPMSAEQLVNLGLIRHIDEHIGSIRKTIGR*
Ga0068859_1001638641	3300005617	Switchgrass Rhizosphere	AAAAVVRGLTDDQLAKSGTVFTDAPPMTAEQLITRGLITHIDEHVGSIRKAVGR*
Ga0068859_1008791802	3300005617	Switchgrass Rhizosphere	AAAAVVRGLTDDQLAKSGTVFTDAPPMTAEQLITRGLIIHIDEHIGSIRKAVGH*
Ga0074479_107785362	3300005829	Sediment (Intertidal)	AKSGVVFTDAPPMTAERLVMLALVNHIDEHFGSIRKTVGG*
Ga0068863_1018080081	3300005841	Switchgrass Rhizosphere	PMAAGVVRGLSDDQLAKSGAVFTDAPAMTAEQLVMGGLINHIDEHIGSIKKTVGK*
Ga0068860_1014844262	3300005843	Switchgrass Rhizosphere	PTAAGVVRGLSDDQLAKSGAVFTDAPPMTAEQLIMGGLINHIDEHIGSIKKTVGK*
Ga0075297_10057351	3300005878	Rice Paddy Soil	EQLAKSATLGPGGPTMTAEQLITRGLLNHIDEHFGSIRKTVGH*
Ga0081538_101250981	3300005981	Tabebuia Heterophylla Rhizosphere	AVVRGLHDDQLAEHGTVFTDAPPMTAEEVIASGLITHIDAHIGSIRKTVGS*
Ga0066651_102008591	3300006031	Soil	KSGTVFTDAPPMTAEQLIMRGLLGHIDEHMGSIRKTVGV*
Ga0075417_103169804	3300006049	Populus Rhizosphere	NSGTVFTGAPPMTCLQVIDGALINHIDEHMGSIHKTVGG*
Ga0066653_105314633	3300006791	Soil	FAVVWGLNDDQLAKSGTVFTDAPPMTAEQLIMLGLLGHIDEHMGSIRKTVGM*
Ga0066660_104201221	3300006800	Soil	TVFTDAPPMTAEQLIMRGLLGHIDEHMGSIRKTVGV*
Ga0075421_1014224281	3300006845	Populus Rhizosphere	LATSGVVLADAPPLTAEQLIERGLIAHIDEHFGNIRRAVGPAPAG*
Ga0075425_1008512371	3300006854	Populus Rhizosphere	TVFADVPPMSAEQLIMLGLLGHIDEHMGSIRKTAGM*
Ga0068865_1011061391	3300006881	Miscanthus Rhizosphere	VFTDAPAMTAEQLVMGGLINHIDEHIGSIKKTVGK*
Ga0099791_100132615	3300007255	Vadose Zone Soil	SKSGTVFTDVPPMTAERLIMLGLLGHIDEHMGSIRKTVGM*
Ga0099829_108701823	3300009038	Vadose Zone Soil	AKSGTVFAGLPPMTAEQLALRALINHTDEHYGSIKKTIGA*
Ga0099828_119672461	3300009089	Vadose Zone Soil	TVFTDAPPMTAEQLIMLGLLGHIDDHMGSIRKTIGM*
Ga0099827_103198231	3300009090	Vadose Zone Soil	KGAPAAAAVVRGLNDDQLAKSGTVFADAPPMTAEQLIARGLINHVDEHVGSIRKTVGH*
Ga0099827_116961912	3300009090	Vadose Zone Soil	SDEQLAKSGTVFVGMPPMTAEDMVVRALLGHLDEHYGSIRKTVGA*
Ga0111539_124471112	3300009094	Populus Rhizosphere	TAAAAGVRGLSDDQLAKSGTVFTDAPPMTAEQLIMLALLGHIDDHMGSIRKTVGG*
Ga0066709_1032287331	3300009137	Grasslands Soil	LNDDQLAKSGTVFTDVPPMTAERLIMLGLHSHIDEHVGSIRKTIDH*
Ga0111538_116293261	3300009156	Populus Rhizosphere	SDDQLAKSGTVLSDAPPMTAEQVVTGILISHIDDHFGSIRKTVGH*
Ga0105092_102900671	3300009157	Freshwater Sediment	TVRGLSDEELAKRGAVFTDAPPMSAEELVMGALIIHIDEHFGSIRRTVGL*
Ga0105057_10527511	3300009813	Groundwater Sand	AVLRGLSDDQLAKSGIVLTDAPPMSVEQIVTGGLILHLDDHFGSIRKTLGQ*
Ga0105070_10341582	3300009815	Groundwater Sand	VAAAAATIRGLSDDQLAKSGTVFTGMPPMTAEQLITSGLLDHTDEHFGSIRKTVGHGTGR
Ga0105072_11313512	3300009818	Groundwater Sand	DQLAKSGTVFTGMPPMTAEQLITCGLLDHTDEHFGSIRKTVGHGTGR*
Ga0105074_11065971	3300010029	Groundwater Sand	IVFTDAPPMAVEQLVTSGLIIHIDEHFGSIRKTVGK*
Ga0126380_120228411	3300010043	Tropical Forest Soil	EAVIAAGLVRRLSDDDLAKSGTVLTDRPPMTAEQLITAGLIVHIDQHSGSIRKTVDHSRVKPIPE*
Ga0126382_101670284	3300010047	Tropical Forest Soil	ATSGTVFTDAPPMTAEQLIRLGLLGHIDDHMGSIRKTVGV*
Ga0127453_11172512	3300010102	Grasslands Soil	LNDDQLAKSGTVFTDAPPMTAEQLIMLGLLGHIDEHMGSIRKTVGM*
Ga0127449_10560552	3300010117	Grasslands Soil	AFAVVWGLNDDQLAKSGTVFTDAPPMTAEQLIMLGLLGHIDEHMGSIRKTVGM*
Ga0134082_100834351	3300010303	Grasslands Soil	DQLAKSGTVFTDVSPMTAEQLILLGLLGHIDDHMGSIRKTVGV*
Ga0134088_106512621	3300010304	Grasslands Soil	GTVFTDAPPMTAEQLIMLGLVGHIDDHMGSIRKTIGM*
Ga0134109_100781992	3300010320	Grasslands Soil	AATAFAVVRGLNDDQLAKSGTVFTDVSPMTAEQLIVLGLLGHIDDHMGSIRKTIGM*
Ga0134111_100936231	3300010329	Grasslands Soil	LATSETVFTDAPPMTAEQLIMLGLVGHIDDHTGSIRKTVGM*
Ga0134123_135587812	3300010403	Terrestrial Soil	VRGLTDDQLAKSGTVFTDAPPMTAEQLITRGLIMHIDEHVGSIRKAVGH*
Ga0137392_103511131	3300011269	Vadose Zone Soil	EQLAKSGTVFAGLPPMTAEQLALRALINHTDEHYGSIRKTIGA*
Ga0137326_11058702	3300011417	Soil	RGLSDEQLAKRATVLADAPPMSVEELIMGGLLGHIDDHFGSIRKTVGR*
Ga0137382_106581372	3300012200	Vadose Zone Soil	FTDGPPMTAEQLINLGLLSHVDEHMGSIRTTVGM*
Ga0137361_116205081	3300012362	Vadose Zone Soil	LAKSVTVFTDGPPMTAEQLIMLGLLGHIDEHVGSIRKTIDH*
Ga0134057_11880402	3300012396	Grasslands Soil	AFAVVRGLNDDQLAKSGTVFTDAPPMTAEQLIMLGLLGHIDEHMGSIRKTVGM*
Ga0134056_10699942	3300012397	Grasslands Soil	FAVVRGLNDDQLAKSGTVFTDAPPMTAEQLIMLGLLGHIEEHMGSIRKTVGM*
Ga0134056_11029462	3300012397	Grasslands Soil	DDQLAKSGTVFTDAPPMTAEQLIMLGLLGHIDEHMGSIRKTVGM*
Ga0134048_12774701	3300012400	Grasslands Soil	NDDQLAKSGTVFTDAPPMTAEQLIMLGLLGHIDEHMGSIRKTVGM*
Ga0134049_13339992	3300012403	Grasslands Soil	AVRAFAVVWGLNDDQLAKSGTVFTDAPPMTAEQLIMLGLLGHIDEHMGSIRKTVGM*
Ga0134050_11613172	3300012407	Grasslands Soil	VWGLNDDQLAKSGTVFTDAPPMTAEQLIMLGLLGHIDEHMGSIRKTVGM*
Ga0134060_10151592	3300012410	Grasslands Soil	GLNDDQLAKSGTVFTDAPPMTAEQLIMLGLLGHIEEHMGSIRKTVGM*
Ga0137419_100042731	3300012925	Vadose Zone Soil	SVFTDAPPMTAEQLIMLGLLGHIDEHMGSIRKTVGM*
Ga0137419_101315431	3300012925	Vadose Zone Soil	TAAATIRGLSDAELAASGTVLKGLPPMTAEQLIAGGLLGHIDEHYGSIRKTVGH*
Ga0137404_114721231	3300012929	Vadose Zone Soil	VQSLSDDQLATSGTVFTDAPPMTAEQLTMLGLIGHIDDHVGSIRKTVGM*
Ga0137407_100969641	3300012930	Vadose Zone Soil	QLATSGTVFTDAPPMTAEQLTMLGLIGHIDDHVGSIRKTVGM*
Ga0153915_127500981	3300012931	Freshwater Wetlands	GAATAAAVVRGLSDDQLAKSGIVFTDAPPMTAEQLVQRGLVGHIDEHFGSIRKTVAKP*
Ga0137410_110280521	3300012944	Vadose Zone Soil	SDDQLAKSGAVFTDAPPMTAEQLVMGGLINHIDEHIGSIQKTVGK*
Ga0153916_127396252	3300012964	Freshwater Wetlands	AIAVAVIRGLSDDQLAKSGIVFTDAPPMTAEQLITGGLLGHIEEHFGSIRKTVGN*
Ga0134077_102554253	3300012972	Grasslands Soil	GTVFTDAPPMTAEQLIKLGLVGHIDDHMGSIRKTVGM*
Ga0134110_104749711	3300012975	Grasslands Soil	DDQLAKSGTVFTDVSPMTAEQLIVLGLLGHIDDHMGSIRKTIGM*
Ga0134076_104771901	3300012976	Grasslands Soil	LAKSGTVFADAPPMTAEQLIARGLINHVDEPVASIRKTVGH*
Ga0134075_103255152	3300014154	Grasslands Soil	ATASAVVRGLNDDQLAKSGIVFTDAPPMTAEQLIMRGLLGHIDDHMGSIRRTVAA*
Ga0134079_106541811	3300014166	Grasslands Soil	TVFAGAPPMTAEQLITRGLIGQIDEHFGSIRKTVGR*
Ga0075342_12056941	3300014320	Natural And Restored Wetlands	AAVVLGLSDQELAKSGTVLTGAPPMTAEQVVTGILINHIDSHFGSIRKTVGR*
Ga0134089_100062561	3300015358	Grasslands Soil	QLAKSGTVFTDAPPMTAEQLIMLGLLGHIDEHMGSIRKTVGV*
Ga0134085_105361492	3300015359	Grasslands Soil	LHDDQLTKSGTVFTDAPPMTAEQLIMRGLLGHIDEHMGSIRKTVGV*
Ga0182035_101658583	3300016341	Soil	SLSDDQLAKSGAVFSDVPPITAEQLIMRGLLSHIDEHMGSIRKTVGM
Ga0182034_111667762	3300016371	Soil	PVFTEAPPMTAEQLIQGALIHHVDEHIGSIRKTVGH
Ga0134074_13127181	3300017657	Grasslands Soil	VVQSLSDDQLATSGTVFTDAPPMTAEQLIMLGLVGHIDDHTGSIRKTVGM
Ga0134083_104774292	3300017659	Grasslands Soil	LSDDQLATSGTVFTDAPPMTAEQLIKLGLVGHIDDHMGSIRKTVGM
Ga0184638_12895241	3300018052	Groundwater Sediment	VVRGLSDDQLARSGTVVRDAPPMTAEQVVTGGLFRHIDDHIGSIRKTVGK
Ga0184615_101880661	3300018059	Groundwater Sediment	RGLSDDQMAKSGIVFTDAPAMTAEQLVQRGLVSHIDEHVGSIRKTVGR
Ga0184618_103731241	3300018071	Groundwater Sediment	TVFTDAPPLTAEQVIAGGLINHIDEHFGSIRRTVGG
Ga0184640_104754122	3300018074	Groundwater Sediment	PVAAAVVRGLSDDQLAKSGAVFTDAPPMTAEQVVMGGLITHIDEHFGSIRKTVGQ
Ga0184609_105588551	3300018076	Groundwater Sediment	SGTVMKEMPPLTAEQMVIGGLIKHVDEHVASIRGTVGA
Ga0184612_102006083	3300018078	Groundwater Sediment	SDDQLAKSGAVFTDAPPMTAEQVVMGGLITHIDEHFGSIRKTVGG
Ga0066655_106131282	3300018431	Grasslands Soil	AKSGTVFTDAPPMTAEQLIMLGLLGHIDEHMGSIRKTVGM
Ga0066662_110241463	3300018468	Grasslands Soil	AKSGTVFADAPPMTAEQLIARGLINHVDEHVASIRKTVGH
Ga0184642_10439542	3300019279	Groundwater Sediment	VRGLSDDQLAKSGTVFTDAPPLTAEQVIAGGLINHIDEHFGSIRRTVGG
Ga0173481_106978461	3300019356	Soil	HLAKSGTVFTDAPPMTAEQLITRGLIIHIDEHIGSIRKAIAH
Ga0190264_101011834	3300019377	Soil	GLSDAELATSGTLLKGLPPMTAEQVIVNGLLVHIDEHFGSIRKTVGH
Ga0179594_102887541	3300020170	Vadose Zone Soil	VFTDAPPMTAERLIMLGLLGHIDEHLGSIRKTVGM
Ga0179594_102892722	3300020170	Vadose Zone Soil	GTVFTEVPPMTAEQLIVLGLLGHIDDHMGSIRKTIGM
Ga0247789_10938562	3300023266	Soil	AAVVRGLTDDQLAKSGTVFTDAPPMTAEQLITRGLIIHIDEHVGSIRKAVGH
Ga0210073_10877493	3300025569	Natural And Restored Wetlands	ARTGVVFAGAPAMSSEQLIMLGLINHIDEHFGSIQKTVGG
Ga0207646_115938412	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	DQLAKSGTVFTGLPPMTAEQLITRGLLNHVDEHFGSIRQTVGDATRG
Ga0207646_117807021	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LAKSGTVFTDAPPMTAEQLITRGLIIHIDEHVGSIRKAVGH
Ga0207648_102673482	3300026089	Miscanthus Rhizosphere	TAAAVVRGLSDEQLAKSGAVFTDAPAMTAEQLVMGGLINHIDEHIGSIKKTVGK
Ga0207648_119764271	3300026089	Miscanthus Rhizosphere	DDQLAKSGTVFTDAPPMTAEQLITRGLIIHIDEHVGSIRKAVGH
Ga0209236_11754761	3300026298	Grasslands Soil	MRGLNDDQLAKSGTVFTDAPPMTAEQLIMLGLLGHIDDHMGSIRRAVGM
Ga0209158_10067798	3300026333	Soil	RAFAVVRGLNDDQLAKSGTVFTDAPPMTAEQLIMLGLLGHIDEHMGSIRKTVGM
Ga0209804_13380742	3300026335	Soil	LHNQGVAAAAAVVRGLSDEQLAKSGTVFTDAPPMTAERLVTAGLLNHIDEHIGSIRKTVG
Ga0209376_13347441	3300026540	Soil	RGLSDDQLAKSGTVFTDAPPMTAEQLIMLGLLGHIDEHIGSIRRTVGM
Ga0209577_101508214	3300026552	Soil	LSDDQLAKSGTVFTDAPPMTAEQLVMRGLIAHIDEHVGSIRKTVGP
Ga0179587_103719273	3300026557	Vadose Zone Soil	AAATIRGLSDAELAASGTVLKGLPPMTAEQLIAGGLLGHIDEHYGSIRKTVGH
Ga0209845_10742171	3300027324	Groundwater Sand	LDDDQLAKSGTVVTDAPPMTAEQVVTGGLFRHIDEHFGSIRKTVGK
Ga0209854_10009036	3300027384	Groundwater Sand	RNLSDDQLAKSGIVLTDAPPMSVEQIVTGGLILHLDDHFGSIRKTLGQ
Ga0209701_104822552	3300027862	Vadose Zone Soil	VRPRLYAPRGTAAAVVRGLSDEQLARSGIVFAGMPPSAEQLVMGGLINHVDEHSGSVRKTIGY
Ga0209814_102363234	3300027873	Populus Rhizosphere	VVRGLDDSQLNNSGTVFTGAPPMTCLQVIDGALINHIDEHMGSIHKTVGG
Ga0209293_107666972	3300027877	Wetland	IAVAVIRGLSDDQLAKSGIVFSDAPPMTAEQLITGGLLNHIDAHFGSIRKTVRNS
Ga0209859_10232921	3300027954	Groundwater Sand	ATIRGLSDDQLAKSGTVFTGMPPMTAEQLIISGLLDHTDEHFGSIRKTVGDGTEW
Ga0307312_111002202	3300028828	Soil	DQLAKSGTVFTDAPPLTAEQVIAGGLINHIDEHFGSIRRTVGG
Ga0247827_101701631	3300028889	Soil	LAKSGTVFTDAPPMTAEQLVTRGLINHIDEHVGSIRKAVGH
Ga0310900_118253302	3300031908	Soil	SGLVFSELPPMTAEQLIMGGLLNHIDEHIGSIRTTVGR
Ga0310884_107877412	3300031944	Soil	LSDDQLAKSGTVFSDAPPMTAEQLMMRALLSHIDEHIGSIRKTVGI
Ga0326597_101147122	3300031965	Soil	VRDLSDEQLAKSGIVFTGMPPMTAEQLVMRGLLGHIDEHFGSIRKTIGG
Ga0307471_1035980641	3300032180	Hardwood Forest Soil	GTVFTDVPPMTAEQLVMRGLIGHIDEHVGSIRKTVGP
Ga0307472_1026138391	3300032205	Hardwood Forest Soil	GVVRGLNDDQLGKSGTVFTDTPPMTAEQMIMLGLLGHIDEHIGSIRKTVGR
Ga0335080_101271884	3300032828	Soil	AATVRGLSDDQLAKTGTVFTDMPPMTAEQLIMRGLLSHIDEHIGSIRKTVGM
Ga0326726_100762201	3300033433	Peat Soil	AATVRGLSDEQLAKRGTVFSDAPPMSAEELIMGGLILHIDEHVGSIRKTVGL
Ga0326726_114434012	3300033433	Peat Soil	GAAIAAAVIRGLSDDQLGKSAIVIANAPPMTAEQLITGGLLGHIDEHFRSIRKTV
Ga0316624_114605001	3300033486	Soil	SDDQLAKSGMIVPGAPPMTVEQLITGGLINHLDQHFGSIRKTVGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062266

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences