Metagenome / Metatranscriptome Family F062292

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062292
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	79 residues
Representative Sequence	VRLLWSLPKAAPALLRLLGAYVDLASLDLARAQREIAAELLASAIIVICGLFAVFLGCLAVVAYTWDTPYRVTAIAWM
Number of Associated Samples	101
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	92.31 %
% of genes near scaffold ends (potentially truncated)	95.42 %
% of genes from short scaffolds (< 2000 bps)	95.42 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (87.023 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (35.114 % of family members)
Environment Ontology (ENVO)	Unclassified (36.641 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.328 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 66.04% β-sheet: 0.00% Coil/Unstructured: 33.96%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF05957	DUF883	92.37
PF05227	CHASE3	3.05
PF07730	HisKA_3	1.53
PF00072	Response_reg	0.76
PF09413	DUF2007	0.76
PF00290	Trp_syntA	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG4575	Membrane-anchored ribosome-binding protein ElaB, inhibits growth in stationary phase, YqjD/DUF883 family	Translation, ribosomal structure and biogenesis [J]	92.37
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	1.53
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	1.53
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	1.53
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	1.53
COG0159	Tryptophan synthase alpha chain	Amino acid transport and metabolism [E]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.02 %
Unclassified	root	N/A	12.98 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.02 %
Unclassified	root	N/A	12.98 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.02 %
Unclassified	root	N/A	12.98 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	82.44 %
Unclassified	root	N/A	12.98 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.76 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.76 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	72.52 %
Unclassified	root	N/A	12.98 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.76 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.76 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	71.76 %
Unclassified	root	N/A	12.98 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.76 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.76 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	71.76 %
Unclassified	root	N/A	12.98 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.76 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.76 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459004\|F62QY1Z02J3YFC	Not Available	512	Open in IMG/M
3300001593\|JGI12635J15846_10064142	All Organisms → cellular organisms → Bacteria	2741	Open in IMG/M
3300001593\|JGI12635J15846_10588255	Not Available	648	Open in IMG/M
3300003372\|JGI26336J50218_1009932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	654	Open in IMG/M
3300004080\|Ga0062385_10847071	All Organisms → cellular organisms → Bacteria → Proteobacteria	602	Open in IMG/M
3300004082\|Ga0062384_100179548	All Organisms → cellular organisms → Bacteria → Proteobacteria	1229	Open in IMG/M
3300004091\|Ga0062387_101176664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	599	Open in IMG/M
3300004092\|Ga0062389_102932666	All Organisms → cellular organisms → Bacteria → Proteobacteria	638	Open in IMG/M
3300004631\|Ga0058899_11486461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	612	Open in IMG/M
3300005610\|Ga0070763_10177231	All Organisms → cellular organisms → Bacteria → Proteobacteria	1127	Open in IMG/M
3300005993\|Ga0080027_10031945	All Organisms → cellular organisms → Bacteria → Proteobacteria	1880	Open in IMG/M
3300009093\|Ga0105240_10655856	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1150	Open in IMG/M
3300009500\|Ga0116229_10303054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1349	Open in IMG/M
3300009649\|Ga0105855_1299913	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	510	Open in IMG/M
3300009701\|Ga0116228_10936128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	578	Open in IMG/M
3300010858\|Ga0126345_1221243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	631	Open in IMG/M
3300010867\|Ga0126347_1211999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	542	Open in IMG/M
3300010877\|Ga0126356_10710023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	810	Open in IMG/M
3300011120\|Ga0150983_11542299	Not Available	567	Open in IMG/M
3300011120\|Ga0150983_11777335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	603	Open in IMG/M
3300011120\|Ga0150983_11864779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	633	Open in IMG/M
3300011120\|Ga0150983_15810855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	655	Open in IMG/M
3300011269\|Ga0137392_10832767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	761	Open in IMG/M
3300012189\|Ga0137388_11444932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	626	Open in IMG/M
3300012582\|Ga0137358_10380970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	955	Open in IMG/M
3300012925\|Ga0137419_10261297	All Organisms → cellular organisms → Bacteria → Proteobacteria	1309	Open in IMG/M
3300012925\|Ga0137419_10607889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	879	Open in IMG/M
3300017948\|Ga0187847_10645054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	593	Open in IMG/M
3300019170\|Ga0184570_119576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	695	Open in IMG/M
3300020580\|Ga0210403_10070970	All Organisms → cellular organisms → Bacteria → Proteobacteria	2797	Open in IMG/M
3300020580\|Ga0210403_10512457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	974	Open in IMG/M
3300020581\|Ga0210399_11259220	All Organisms → cellular organisms → Bacteria → Proteobacteria	584	Open in IMG/M
3300021151\|Ga0179584_1311900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	664	Open in IMG/M
3300021168\|Ga0210406_10874182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	678	Open in IMG/M
3300021170\|Ga0210400_11621362	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300021171\|Ga0210405_10175272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1699	Open in IMG/M
3300021178\|Ga0210408_10090198	All Organisms → cellular organisms → Bacteria	2405	Open in IMG/M
3300021307\|Ga0179585_1010792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	656	Open in IMG/M
3300021420\|Ga0210394_11759040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	518	Open in IMG/M
3300021432\|Ga0210384_11564846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	565	Open in IMG/M
3300021861\|Ga0213853_10772331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	649	Open in IMG/M
3300022499\|Ga0242641_1050842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	501	Open in IMG/M
3300022511\|Ga0242651_1023033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	664	Open in IMG/M
3300022523\|Ga0242663_1090468	Not Available	598	Open in IMG/M
3300022528\|Ga0242669_1069397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	636	Open in IMG/M
3300022531\|Ga0242660_1130278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	642	Open in IMG/M
3300022532\|Ga0242655_10126396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	728	Open in IMG/M
3300022533\|Ga0242662_10241046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	583	Open in IMG/M
3300022716\|Ga0242673_1071615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	623	Open in IMG/M
3300022716\|Ga0242673_1077923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	606	Open in IMG/M
3300022720\|Ga0242672_1043227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	733	Open in IMG/M
3300022721\|Ga0242666_1136163	Not Available	592	Open in IMG/M
3300022726\|Ga0242654_10189518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	709	Open in IMG/M
3300022726\|Ga0242654_10217272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	672	Open in IMG/M
3300025913\|Ga0207695_10016396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	8668	Open in IMG/M
3300026304\|Ga0209240_1171515	Not Available	661	Open in IMG/M
3300027072\|Ga0208238_1009555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	813	Open in IMG/M
3300027381\|Ga0208983_1082114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	605	Open in IMG/M
3300027565\|Ga0209219_1071349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	863	Open in IMG/M
3300027567\|Ga0209115_1018074	All Organisms → cellular organisms → Bacteria → Proteobacteria	1551	Open in IMG/M
3300027629\|Ga0209422_1014170	All Organisms → cellular organisms → Bacteria → Proteobacteria	1973	Open in IMG/M
3300027692\|Ga0209530_1062776	All Organisms → cellular organisms → Bacteria → Proteobacteria	1078	Open in IMG/M
3300027768\|Ga0209772_10033208	All Organisms → cellular organisms → Bacteria → Proteobacteria	1505	Open in IMG/M
3300027860\|Ga0209611_10184878	All Organisms → cellular organisms → Bacteria	1287	Open in IMG/M
3300029883\|Ga0311327_10615459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	651	Open in IMG/M
3300029992\|Ga0302276_10342590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	633	Open in IMG/M
3300030007\|Ga0311338_10013383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	12129	Open in IMG/M
3300030545\|Ga0210271_10686148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1338	Open in IMG/M
3300030586\|Ga0265393_1055197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	767	Open in IMG/M
3300030596\|Ga0210278_1125808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	606	Open in IMG/M
3300030598\|Ga0210287_1224721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	526	Open in IMG/M
3300030602\|Ga0210254_10903054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	570	Open in IMG/M
3300030618\|Ga0311354_10980140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	781	Open in IMG/M
3300030646\|Ga0302316_10336705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	608	Open in IMG/M
3300030730\|Ga0307482_1138050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	701	Open in IMG/M
3300030730\|Ga0307482_1173252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	642	Open in IMG/M
3300030738\|Ga0265462_11235051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	671	Open in IMG/M
3300030739\|Ga0302311_10377680	Not Available	1004	Open in IMG/M
3300030740\|Ga0265460_11430258	Not Available	683	Open in IMG/M
3300030740\|Ga0265460_11829447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	624	Open in IMG/M
3300030740\|Ga0265460_12559971	Not Available	544	Open in IMG/M
3300030740\|Ga0265460_12909496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	515	Open in IMG/M
3300030741\|Ga0265459_14261337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	502	Open in IMG/M
3300030743\|Ga0265461_11541624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	722	Open in IMG/M
3300030743\|Ga0265461_12687994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	592	Open in IMG/M
3300030762\|Ga0265775_107902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	643	Open in IMG/M
3300030776\|Ga0075396_1661425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	572	Open in IMG/M
3300030811\|Ga0265735_109249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	505	Open in IMG/M
3300030813\|Ga0265750_1050807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	627	Open in IMG/M
3300030853\|Ga0075372_11109466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	530	Open in IMG/M
3300030886\|Ga0265772_104705	Not Available	594	Open in IMG/M
3300030907\|Ga0074013_11112722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	628	Open in IMG/M
3300030971\|Ga0075375_11588952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	592	Open in IMG/M
3300030974\|Ga0075371_10771442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	633	Open in IMG/M
3300030998\|Ga0073996_10004935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	525	Open in IMG/M
3300030998\|Ga0073996_12363377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	579	Open in IMG/M
3300031023\|Ga0073998_11437583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	602	Open in IMG/M
3300031023\|Ga0073998_11582266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	750	Open in IMG/M
3300031049\|Ga0074036_10456520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	506	Open in IMG/M
3300031261\|Ga0302140_11075821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	547	Open in IMG/M
3300031446\|Ga0170820_10495484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	811	Open in IMG/M
3300031446\|Ga0170820_14870867	Not Available	654	Open in IMG/M
3300031446\|Ga0170820_15412874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	635	Open in IMG/M
3300031446\|Ga0170820_15786697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	557	Open in IMG/M
3300031469\|Ga0170819_16186528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	578	Open in IMG/M
3300031469\|Ga0170819_16391639	Not Available	648	Open in IMG/M
3300031474\|Ga0170818_111355835	Not Available	738	Open in IMG/M
3300031474\|Ga0170818_113082517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	593	Open in IMG/M
3300031474\|Ga0170818_113649282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	507	Open in IMG/M
3300031474\|Ga0170818_115470849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	594	Open in IMG/M
3300031525\|Ga0302326_12549248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	640	Open in IMG/M
3300031525\|Ga0302326_12674804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	620	Open in IMG/M
3300031525\|Ga0302326_13247693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	547	Open in IMG/M
3300031590\|Ga0307483_1021794	Not Available	632	Open in IMG/M
3300031663\|Ga0307484_109985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	631	Open in IMG/M
3300031663\|Ga0307484_113383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	576	Open in IMG/M
3300031708\|Ga0310686_106589733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	648	Open in IMG/M
3300031718\|Ga0307474_10930842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	688	Open in IMG/M
3300031823\|Ga0307478_10909314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	736	Open in IMG/M
3300031826\|Ga0316031_106982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	667	Open in IMG/M
3300031827\|Ga0247532_102213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	682	Open in IMG/M
3300032072\|Ga0326631_106766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	703	Open in IMG/M
3300032072\|Ga0326631_110928	Not Available	603	Open in IMG/M
3300032515\|Ga0348332_10539302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	741	Open in IMG/M
3300032515\|Ga0348332_11989217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	620	Open in IMG/M
3300032515\|Ga0348332_12400215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	640	Open in IMG/M
3300032515\|Ga0348332_12676542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	612	Open in IMG/M
3300032515\|Ga0348332_13959629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	691	Open in IMG/M
3300032756\|Ga0315742_12115073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	631	Open in IMG/M
3300033829\|Ga0334854_089078	Not Available	737	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.18%
Host-Associated	Host-Associated	3.82%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.08%
Aquatic	Environmental → Aquatic	6.11%
Plants	Host-Associated → Plants	3.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.86%
Peat	Environmental → Terrestrial → Peat	8.40%
Freshwater	Environmental → Aquatic → Freshwater	6.11%
Plant Litter	Environmental → Terrestrial → Plant Litter	3.82%
Peat Moss	Host-Associated → Plants → Peat Moss	2.29%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.53%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.65%
Loam	Environmental → Terrestrial → Soil → Loam	10.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.40%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.34%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	3.82%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	2.29%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.53%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	48.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.40%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.34%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	3.82%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	2.29%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.53%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.53%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	35.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	8.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.63%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.34%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.34%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.34%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.58%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	3.82%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.29%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	2.29%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	2.29%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.53%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.76%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.76%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.76%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.76%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.76%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459004	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm (2)	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300003372	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009649	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-059	Environmental	Open in IMG/M
3300009701	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300010858	Boreal forest soil eukaryotic communities from Alaska, USA - C3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010877	Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300019170	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLI3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021151	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021307	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022499	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022511	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022512	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022716	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022720	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022721	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300027072	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF013 (SPAdes)	Environmental	Open in IMG/M
3300027381	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027860	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes)	Host-Associated	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029992	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_3	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030545	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO142-VCO033SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030586	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE041SO (Eukaryote Community Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300030596	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO135-VCO085SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030598	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO747-VDE048SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030602	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO133-ANR018SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030646	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_2	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030762	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030776	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030811	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030813	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030853	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030886	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030907	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Wood TCEFB (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030971	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030974	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030998	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031023	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil TCEFA (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031049	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Mineral C2 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031590	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031663	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031826	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLI3 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031827	Metatranscriptome of spruce litter microbial communities from Bohemian Forest, Czech Republic - CLI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032072	Soil microbial communities from Bohemian Forest, Czech Republic ? CSI2 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032756	Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined Assembly	Environmental	Open in IMG/M
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4B_04179380	2170459004	Grass Soil	VPNKGFNVRLLWLLSKAAPALLRHMVAYVDLASLDLARAHREIAAQAVASVIILISGFFALFMGCLAVVAYTWDTPHRVSAILW
JGI12635J15846_100641424	3300001593	Forest Soil	VRLLWLLPKAAPALLRHLVAYVDLVSVDLARAQREFMAELVISAITAICTLFAALMGCLALVAYTWDTPYRMTAIAWMGGGFLVAAVV
JGI12635J15846_105882551	3300001593	Forest Soil	MLWSLPKAGPALLRHLAAYVDLASLDLARTQRELTTELLAFAVVAICGLFAVFMGCLAVVAYTWDTPHRVAAIAWMGGGFVVVAIAAA
JGI26336J50218_10099321	3300003372	Bog Forest Soil	MRHVGAYIELAELDLARAQRELTAQLVAIGVVAICALFAVILACLGVVAYTWDKPYRVAAIAWMGGGFLVLAIAAAL
Ga0062385_108470711	3300004080	Bog Forest Soil	MRALWSLPKAAPALLRHIAAYLELAELDLARTQREFAAQLAASAVVAICALFAVFMACLGVVAYTWDTPYRVAAIAWMGGGF
Ga0062384_1001795483	3300004082	Bog Forest Soil	VRLLWSLPKAAPALLRHIAAYIDLASLDLARAHRELAAQFLATGIVVICGLFAILLGCLAVVAYTWDTPYRVSAIAWMGGGFLLIAVVAWIYRSRVVGAKSEI
Ga0062387_1011766641	3300004091	Bog Forest Soil	VRLLWSLPKAAPALLRHLAAYADLASLELARAGREITAQIVASAIVVICALFVLVLGCLAVIAYTWDTPH
Ga0062389_1029326662	3300004092	Bog Forest Soil	VRLLWSLPKAAPALLRHLAAYADLASLELARAGREITAQIVASAIVVICALFVLVLGCLAVIAYTWDTPHRVGAIAWMAGGFL
Ga0058899_114864611	3300004631	Forest Soil	MRLLWSLPKAAPALLRHLVAYIDLAGLDLARAQREVTAELLASAVCAICVLFAVFMGCLVIVAYTW
Ga0070763_101772313	3300005610	Soil	VRLLWSLPKAAPALLRHLAAYVDLAGLEFARAGREIAAQIVVSAIIVICAFFALGLGCLAVIAYTWDT
Ga0080027_100319451	3300005993	Prmafrost Soil	VRLLWILPKAAPALLRHFVAYVDLASLDLARTQRELSAEFLASAIVAVCGLFAVFLGCLAVVAYTW
Ga0105240_106558561	3300009093	Corn Rhizosphere	VRLLWALPKAAPALLRHIAAYVDLASLDLARAQREIAAEAVALAVMVLCGLFALFMACLVVVACTWDTPHRVAAI
Ga0116229_103030541	3300009500	Host-Associated	VRLLWLLPKAAPVLLRHLVAYAELAGLDLAKTQRDISAQLLASALIVIGAVFALFMGCLLVIAYTWDTPHRVAAIAWMGGG
Ga0105855_12999132	3300009649	Permafrost Soil	MLWSLPKAAPALLRHLAAYVDLASLDLQRSRREIAAELLASAIVALCALFVVFMACLAVVAYTWDTPYRVSAIIWMGAGFLAAALLALVYRSNA
Ga0116228_109361282	3300009701	Host-Associated	VRLLWSLPKAAPVLLRHMAAYIDLAGLDLARTQRELTAQFAASAVFLVCAVFAVAMGCLLVVARTWDTPY
Ga0126345_12212431	3300010858	Boreal Forest Soil	VRLLWLLPKAAPALLRHLAAYVDLAGLDLARAKREIAAEFLATAVAAVCVLFAVLLGCLAVVAYTWDTPHRVT
Ga0126347_12119992	3300010867	Boreal Forest Soil	LWLLPKAAPALLRHLVAYIDLVSLDVARAQRELVAELVTSAIMGICALFAVLMGCLAVVAYAWDTPYRMT
Ga0126356_107100232	3300010877	Boreal Forest Soil	MRHIGAYIELVALDLARAQREITAQVVAAAIAAICALFALFMFCLGVVAYTWDTAYRVAAIAWMGGGFLVIAIAAVVYRSRLARAS
Ga0150983_115422991	3300011120	Forest Soil	VRLLWSLPKAAPALLRHLAAYVDLAGLELARAGREIAAQIVVSVVIVICAFFAVGLGCLVVIAYTW
Ga0150983_117773351	3300011120	Forest Soil	VRLLWTLPKAAPALLRHVAAYADLAGLDLARTRREIAAELLASAIAAICGLFAVFMGCLAVVAYTW
Ga0150983_118647792	3300011120	Forest Soil	MLWSLPKAAPALLRHLAAYIDLASLDLARAYRETAAELLASAIIVIGGLFAVFMGCLAVVAYTWDTPHRMSAIGWMG
Ga0150983_158108551	3300011120	Forest Soil	MRLLWSLPKAAPALLRHLVAYIDLAGLDLARAQREVTAELLASAVCAICVLFAVFMGCLVIVAYTWDTPHRVTTIAWMGG
Ga0137392_108327671	3300011269	Vadose Zone Soil	VRLLLWSLLKAAPVLLRHLLAYADLASLDLARSRREIAAEYLASAIAAICGLFAVFMGCLTVVA
Ga0137388_114449322	3300012189	Vadose Zone Soil	VRLLWSLAKATPALLRHLVAYVDLASLDLARASREMAAEFLASAIAAICGLFAVFMGCLVVVACTWDTPHRVSAIAWMGGGFLALA
Ga0137358_103809701	3300012582	Vadose Zone Soil	VRLLLWSLAKATPALLRHLVAYVDLASLDLARAQREMAAEFLASAIAAICGLFAVFMGCLVVVAC
Ga0137419_102612973	3300012925	Vadose Zone Soil	VRLLWSLPKAAPALLRHVAAYADLAGLDLARTRREIAAEFLASAIAAICSLFAVFMGCLAVVAYTWDTPHRVSAIAWM
Ga0137419_106078893	3300012925	Vadose Zone Soil	VRLLWLLPKAAPALLRHLVAYLDLAGLDLARAQRELTAELVISAIVVVCGLFAAFMACLAVVAYTWDTPYRVT
Ga0187847_106450542	3300017948	Peatland	MLWSLPKAAPALLRHLAAYVDLASLDLERSRREIAAEFLASAIVALCALFVVFMACLAVVAYTWDTPHRVSAIIWMGAGFL
Ga0184570_1195761	3300019170	Soil	VRLLWSLPKAAPALLRHLAAYVDLASLDLARSQREIAAELLAAAVVGICAMFAVLMGCLAVVAYTWDTPHRMS
Ga0210403_100709705	3300020580	Soil	VRLLWTLPKAAPALLRHVAAYADLAGLDLARTRREIAAELLASAIAAICGLFAVFMGCLAVVAYT
Ga0210403_105124573	3300020580	Soil	MRAIWSLPKAAPALMRHVGAYIELVELDLARAQRELAAQLVAIGVVAICALFAVMLACLGVVAYTWDKPYRVAAIAWMGGGFLVLAIAAAIYLSRL
Ga0210399_112592201	3300020581	Soil	VRGLWSLPKAAPALLRHIGAYIELAGLDLARAQREITAQIVAVAIVAICVLFAVFLICLGVIAYAWDTPYRVAVIAWMAG
Ga0179584_13119001	3300021151	Vadose Zone Soil	VRLLWILPKAAPALLRHAAAYADLASLDFARARREIVAELLASAIAGICGLFAVFMGCLAVVAYTWDTPHRVSAIAWMGIGFLGI
Ga0210406_108741822	3300021168	Soil	VRLLWSLPKAAPALLRHLAAYVDLASLDLARTRREIGAEFLATAVAAVCGLFAVLLGCLAVVAYTWDTPYRLTA
Ga0210400_116213622	3300021170	Soil	VRLLWTLPKAAPALLRHVAAYADLAGLDLARTRREIAAELLASAIAAICGLFAVFMGCLAVVAYTWDTPHRLSAIAWMGGGFLGAAI
Ga0210405_101752723	3300021171	Soil	MRALWSLPKAAPALLRHIGAYLELAELDLARTQREFAAQLAAIAVVAICALFALFLACLCVVAYTWDTPNRMAAIAWMGGGFLVLAVAAAIYLYRV
Ga0210408_100901981	3300021178	Soil	VRLLWLLPKAAPALLRHLVAYADLASLDLARARREIAAEFLGAAVAAISILFAVFMGCLAVVAYT
Ga0179585_10107921	3300021307	Vadose Zone Soil	VRLLWLLPKAAPALLRHLAAYVDLAGLDLARARREIAAEFLATAVAAVSGLFALLLGCLAVVAYTWDTPHRVTAIVWMG
Ga0210394_117590401	3300021420	Soil	VRGLWSLPKAAPALMRHIGAYVELVGLDLARAHREITAQVIASAIAAVCVLFALFLTCLGVVAYTWDTSYRVAAIAWMGGG
Ga0210384_115648462	3300021432	Soil	MRALWSLPKAAPALMRHVGAYIELAELDLARAQRELAAQLVAIGVVAICALFAVMLACLGVVAYTWDKPYRVAAIAWMGGGFLVLAIAAAIYLSRLA
Ga0213853_107723311	3300021861	Watersheds	VRRLLWSLPKAAPALLRHFAAYVDLASLDLARVSRELAAEVVASAIAAICGLFAVLMGCLAVVAYTWDTPRRMMAIAWMGGG
Ga0242641_10508421	3300022499	Soil	VRLLWSLPKAAPALLRHLAAYVDLASLDLARTRREIGAEFLATAVAAVCGLFAVLLGCLAVVAYTWDT
Ga0242651_10230331	3300022511	Soil	VRLLWSLPKAAPALLRHLAAYVDLASLDLARTRREIGAEFLATAVAAVCGVFAVLLGCLAVVAYTWDTPHRVTAIVWMGGGFL
Ga0242676_10319711	3300022512	Soil	MRLLWSLPKAAPALLRHLAAYVDLAGLDLAKAQGEIAAQLVAFAVVAICALFAVFMGCLLVVA
Ga0242663_10904682	3300022523	Soil	VRLLWSLPKAAPALLRHLAAYVDLAGLELARAGREIAAQIVVSIIIAICAFFALALGCLVVIAYTWDTPHRVGAI
Ga0242669_10693971	3300022528	Soil	MRLLWSLPKAAPALLRHLAAYVDLAGLDLAKAQGEIAAQLVAFAIVAICALFAVFMGCLLVVAYTWDTPHRVAAI
Ga0242660_11302782	3300022531	Soil	VRLLWLLPKAAPALLRHLVAYADLASLDLARARREIAAEFLGAAVAAVSILFAVFMGCLAVVAYTWDTPHRVSAIAWMGG
Ga0242655_101263961	3300022532	Soil	VRGLWSLPKAAPALMRHIGAYVELVGLDLARAHREITAQVLASAIAAVCVLFALFLTCLGVVAYTWDTSYRVVAIAWMGG
Ga0242662_102410462	3300022533	Soil	VRLLWLIPRAAPALLRHLIAYIDLIGLDLGRAQREFAAQLVMSAIVAICGVFAVFMGCLAVVAYTWDTPYRVTAIACMGGGFLAAAVA
Ga0242673_10716151	3300022716	Soil	MRLLWSLPKAAPALLRHLAAYVDLAGLDLAKAQGEIAAQLVAFAIVAICALFAVFMGCLLVVAYTWDTPHR
Ga0242673_10779231	3300022716	Soil	MLWSLPKAAPALLRHLAAYVDLASLDLARTRREISAEFLATAVAAVCGLFAVLLGCLAVVAYTWDT
Ga0242672_10432272	3300022720	Soil	VRGLWSLPKAAPALMRHIGAYVELVGLDLARAHREITAQVIASAIAAVCVLFAMFLTCLGVVAYTWDTSYRVAAIAWMGGVFLVV
Ga0242666_11361631	3300022721	Soil	VRMLWSLPKAGPALLRHLAAYVDLASLDLARTQRELTTELLAFAVVAICGLFAVFMGCLAVVAYTWDTPHRVAAIAWM
Ga0242654_101895181	3300022726	Soil	VRLLWSLPKAAPALLRLLGAYVDLASLDLARAQREIAAELLASAIIVICGLFAVFLGCLAVVAYTWDTPYRVTAIAWM
Ga0242654_102172721	3300022726	Soil	MLWSLPKAAPALLRHVAAYIDLASLDLARAYRETAAEFLASAIIAIGGLFAVFMGCLAVVAYTWDTPHRLSAIGWMGGGFLAVALVAAAYRS
Ga0207695_100163961	3300025913	Corn Rhizosphere	VRLLWALPKAAPALLRHIAAYVDLASLDLARAQREIAAEAVALAVMVLCGLFALFMACLVVVACTW
Ga0209240_11715151	3300026304	Grasslands Soil	VRLLWSLAKAAPALLRHLVAYVDLAGLDLARARREVAAEFLASAIAAICGLFAVFMGCLAVVAYTWDTPHRVSAIAWMG
Ga0208238_10095552	3300027072	Forest Soil	MLWSLPKAGPALLRHLAAYVELASLDLARTQREVTTELLAFAVVAICGLFAVFMGCLVVVAYTWDTPHRVAAIAWMGGGFVVV
Ga0208983_10821141	3300027381	Forest Soil	MRGLWSLPKAAPALMRHIGAYIELVALDLARAQREITAQVVAAAVAAICALFAVFMFCLGVVAYTWDTAYRVAAIAWMGGGFLVIAIVAVIYRSSL
Ga0209219_10713491	3300027565	Forest Soil	VRLLWLLPKAAPALLRHLVAYVDLVSVDLARAQREFMAELVISAITAICTLFAALMGCLALVAYTWDTPYRMTAIAWMGGGFLVAAVVAALYRMKALRAK
Ga0209115_10180743	3300027567	Forest Soil	VRLLWSLPKAAPALLRHLAAYVDLAGLEFARAGREIAAQIVVSAIIVICAFFALALGCLVVIAYTWDTP
Ga0209422_10141701	3300027629	Forest Soil	VRLLWLLPKAAPALLRHLVAYVDLVSVDLARAQREFMAELVISAITAICTLFAALMGCLAVVAYT
Ga0209530_10627763	3300027692	Forest Soil	MLWSLPKAGPALLRHLAAYVDLASLDLARTQRELTTELLAFAVVAICGLFAVFMGCLAVVAYTWDTPHR
Ga0209772_100332083	3300027768	Bog Forest Soil	MRALWSLPKAAPALMRHVGAYIELAELDLARAQRELTAQLVAIGVVAICALFAVILACLGVVAYTWDKPYRVAAIAWMGGGFLVLAIAAALYLSR
Ga0209611_101848781	3300027860	Host-Associated	VRLLWLLPKAAPVLLRHLVAYAELAGLDLAKTQRDISAQLLASALIVIGAVFALFMGCLLVIAYTWDTPYRVAAI
Ga0311327_106154591	3300029883	Bog	VRLLWSLPKAAPALLRHLAAYIDLASLDLARSQREIAAELLASAMLGICELFAVLMGCLWVIAYTWDTTHRLSAIAWMGGGFVLASVVAA
Ga0302276_103425902	3300029992	Bog	VRLLWSLPKAAPALLRHLAAYMDLASLDIARSQREIAAELLASAIVAICVMFALLMGCLAVVAYTWDTPYRLS
Ga0311338_100133831	3300030007	Palsa	MLWSLPKAAPALLRHVAAYVELVSLDLARAHKEITTELLALAVVAICGLFAVFMGCLVV
Ga0210271_106861485	3300030545	Soil	VRILWSLPKAAPALLRHLAAYIDLASLDLARAYRETAAELLALSIILIGGLFALFMGCLAVVAYTWDTPHRMSA
Ga0265393_10551972	3300030586	Soil	MRALWSLPKAAPALMRHVGAYIELAELDLARAQRELTAQLVAIGVVAICALFAVILACLGVVAYTWDTPYRGAVVGTMKNNRK
Ga0210278_11258081	3300030596	Soil	VRLLWLLPKAAPALLRHLVAYIDLVSLDVARAQREIVAELVISAILGICALFAVLMGCLAVV
Ga0210287_12247211	3300030598	Soil	VRLLWSLPKAAPALLRHLAAYVDLASLDLARSQREIAAKLLASVIVGICAMFAVLMGCLAVVAYTW
Ga0210254_109030542	3300030602	Soil	MRLLWSLPKAAPALLRHLAAYVDLAALDLARAHRELAAQLAASVIMVVCGIVAVFFGCLTIVALTWDTPHRVAAIAWMGGVFL
Ga0311354_109801401	3300030618	Palsa	VRLLWSLPKAAPALLRHIAAYIDLASLDLARAHREIAAQFLATAIVVICGLFAVLLGCLAVVACTWDTPYRVSAIAWMGGGFLLLAIIAAVYRSSVARKK
Ga0302316_103367051	3300030646	Palsa	MLWSLPKAAPALLRHVAAYVELVSLDLARAHKEITTELLALAVVAICGLFAVFMGCLVVVAYTWDTPY
Ga0307482_11380502	3300030730	Hardwood Forest Soil	VRGLWSLPKAAPALMRHIGAYVELVGLDLARAQREITAQVIASAIAAVCVLFALFLTCLGVVAYTWDTSYRVAAIAWMGGGFLVVAIVALIYGF
Ga0307482_11732521	3300030730	Hardwood Forest Soil	VRLLWLIPKAAPALLRHLIAYIDLISLDLGRAQREFAAQLVMSAVVGICGVFAVFMGCLAVVAYTWDTPYRVTAI
Ga0265462_112350511	3300030738	Soil	VRLLWSLPKAAPALLRHLAAYVDLASLDLARSQREIAAELMASAVVAICTLFAVLMGCLAVVAYTWDTPYRVS
Ga0302311_103776801	3300030739	Palsa	MSMLWSLPKAAPVLLRHLAAYVELAALDLAKAQREISAQLLASAIVAVGIFFALMMGCLAVVAATWDTPYRLTAIA
Ga0265460_114302582	3300030740	Soil	MLWSLPKAGPALLRHLAAYVELASLDLARTQREITTELLALAVVAICGLFAVFMGCLAVVAYTWDTPHRMAAIAWMGGGFVVVAIAAAAYRANAA
Ga0265460_118294472	3300030740	Soil	VRMLWSLPKAAPALLRHVAAYIDLASLDLARAYRETAAELLASAIIAIGGLFAVFMACLANKRRKRKVT
Ga0265460_125599711	3300030740	Soil	VRLLWSLPKAAPALLRHLAAYVDLAGLELARAGREIAAQIVVSVIIVISAFFALGLGCLLVIACTWDTPHRVGAIAWMGGGFLGL
Ga0265460_129094961	3300030740	Soil	MLWLLPKAAPALLRHLAAYVDLASLDLARAQREITAELLASAVVIICALFAVFMGCLAVVACTWDTPYRVTAIA
Ga0265459_142613371	3300030741	Soil	MRALWSLPKAAPALMRHVGAYIELAELDLARAQRELTAQLVAIGVVAICALFAVILACLGVVAYTWDTPYRVAAIAWMGG
Ga0265461_115416241	3300030743	Soil	VRMLWSLPKAAPALLRHLAAYIDLAGLDLARAYRETAAELLVLSIIVIGGLFAVFMGCLAVVAYTWDTPHRMSAIAWMGGGFAGVALVAAAYLS
Ga0265461_126879941	3300030743	Soil	VRLFWSLPKAAPALLRHLAAYVDLASLDLARAQREITAQILASAIVLLCGLFAVFMGCLAVVAYTWDTPHRVSAIAWMGGGFLGV
Ga0265775_1079021	3300030762	Soil	MLWLLPKAAPALLRHLAAYVDLASLDLARAQREITAELLASAVVVICALFAVFMGCLAVVACTWDTPYRVTAIAWLGGGFV
Ga0075396_16614251	3300030776	Soil	VRLLWSLPKAAPALLRHLVAYVDLASLDLARAQREIAGQLLSVAIIIVCSLFALFMGCLAVVAYTWDTPHRISAIAWMGVGFLGIAIVAAVY
Ga0265735_1092492	3300030811	Soil	VRLLWSLPKAAPALLRHLAAYVDLASLDLARSRREIAAELLACVVVGICAMFALLMGCLAVMAYTWDT
Ga0265750_10508071	3300030813	Soil	MRLLWLLPKAAPALLRHLAAYVDLAGLDLAKAQGEIAAQLLAGAVIAICALFAVFMGCLLVVAYTWDTPHRVAAIAWMGGGFL
Ga0075372_111094662	3300030853	Soil	VRLLWSLAKATPALLRHLVAYVDLASLDLARASRELAAEFLASAIAAICGLFAVFMGCLVVVACTWDTPHRVSAIAWMGG
Ga0265772_1047052	3300030886	Soil	MLWSLPKAGPALLRHLAAYVELASLDLARTQREITTELLAFAVVAICGLFAVFMGCLAVVAYT
Ga0074013_111127221	3300030907	Soil	VRLFWLLPKAAPALLRHLAAYVDLAALDLARTHREVRAQLVTSAVAVICGVFSVVMGCLVVVAYTWDTPYRVGAIAWMGGGFL
Ga0075375_115889521	3300030971	Soil	VRLLWLLSKAAPALLRHMVAYVDLASVDLARAHREIAAQAVASVIILVSGFLALFMGCLAVVAYTWDTPH
Ga0075371_107714422	3300030974	Soil	VRLLWSLAKATPALLRHLVAYVDLASLDLARASREMAAEFLASAIAAICGLFAVFMGCLVVVACTWDMPHRVSAIAWMGGG
Ga0073996_100049352	3300030998	Soil	VRLLWSLPKAAPALLRHVAAYADLASLDLARTRREIAAEFLASAIAAICGLFAVFMGCLAVVAYTWD
Ga0073996_123633772	3300030998	Soil	VRLLWSLPKAAPALLRLFAAYVDLASLDLARAQREVAGQVLSVAIVILCALLALFMGCLAVVAYTWDTP
Ga0073998_114375832	3300031023	Soil	VRLLWLLPKAAPALLRHLVAYLDLAGLDLARAQRELTAELVISAIVVLCGLFAAFMACLAVVAYTWDTPYRVTAIAWMGGGFLVAAIAGAAYRLKAL
Ga0073998_115822661	3300031023	Soil	VRGLWSLPKAAPALMRHIGAYVELVGLDVARAQREITAQVMASAIAGICLLFAVFMTCLGVVAYTWDTSYRVAAIAWMGGGFLVAAIAALIYRANLARGRSALFTDVRR
Ga0074036_104565202	3300031049	Soil	MRALWSLPKAAPALMRHVGAYIELAELDLARAQRELAAQLVAIGVVAICALFAVILACLGVVAYTWDTPNRVPAIAWMGGGFL
Ga0302140_110758212	3300031261	Bog	MSMLWSLPKAAPVLLRHLAAYVELAALDVAKAQREITAQLLASAIVAVSILFALLMGCLGVVAATWNTPNRLSAIAWMGGGFV
Ga0170820_104954842	3300031446	Forest Soil	VRGLWSLPKAAPALMRHIGAYVELVGLDLARAHREITAQVIASAIAAVCVLFAVFMTCLGVVAYTWDTSYRVAAIAWMGGGFLAVAIVALI
Ga0170820_148708672	3300031446	Forest Soil	VRLLWLLPKAAPALLRHLVAYVDLAGLELAKAQREISSEFLATAIVAVCGLFAVFMGCLAVVAYTWDTPYR
Ga0170820_154128742	3300031446	Forest Soil	VRTLWLLPKAAPALLRHLAAYADLAGLDVARTCREITAEFLASAVLAICSLFAVLMGCLAVVALTWDTPYRVTAIAWMGG
Ga0170820_157866971	3300031446	Forest Soil	VRLLWLLPKAAPALLRHLAAYVDLAGLDLARLRREMAAEFLATAVAAVAGLFVVLLGCLAVVAYTWDT
Ga0170819_161865281	3300031469	Forest Soil	VRLLWSLPKAAPALLRLLAAYVDLASLDLARAQREIAGQVLSVAIVIFGALFALVFGCLAVV
Ga0170819_163916391	3300031469	Forest Soil	VRLLLWSLAKATPALLRHLVAYVDLASLDLARASRELAAEFLASAIAAICGLFAVFMGCLVVVAWTWDTPHRVSAIAWMGGG
Ga0170818_1113558351	3300031474	Forest Soil	VRLLLWSLAKATPALLRHLVAYVDLASLDLARASRELAAEFLASAIAAICGLFAVFMGCLVVVAWTWDTPHRVSAIAWMGGGFL
Ga0170818_1130825171	3300031474	Forest Soil	VRLLWTLPKAAPALLRHLAAYVDLAGLDFARAQREIAAQAVATAIIIIGALFALFMGCLAVVAYTWDTPHRVSAIAWMG
Ga0170818_1136492822	3300031474	Forest Soil	VRLLWSLPKAAPALLRHLVAYVDLASLDVARTCREITAEFLAFAILTVCALFALLMGCLAVVALTWDTPYRVTAIAWMGGGFLVLALGAAAYRASVVRARTP
Ga0170818_1154708492	3300031474	Forest Soil	VRLLWLLPKAAPALLRHLAAYVDLAGLDLARLRREIAAEFLATAVAAVAGLFVVLLGCLAVVAYTWDT
Ga0302326_125492481	3300031525	Palsa	VRLLWSLPKAAPALLRHLAAYVDLASLDLARAHRELTAQFLASAILAVCGLFAVFMACLAVVACTWDTPYRLSAIAWMGGGFAVMAVAA
Ga0302326_126748041	3300031525	Palsa	VRLLWSLPKAAPALLRHIAAYADLASLDLARTSREIAGELAIMAVAVICGLFAVLMACLVVVACTWDTPYRVSAIAWM
Ga0302326_132476931	3300031525	Palsa	MLWSLPKAAPALLRHVAAYVELVSLDLARAHKEITTELLALAVVAICGLFAVFMGCLVVVAYTWDTPYRVAAIAWMGGGFVVVAIAAAAYRANVAR
Ga0307483_10217941	3300031590	Hardwood Forest Soil	VRLLWSLPKAAPALLRHLAAYVDLASLDLARARREIAAQAVASAVVVVCVLFALILGCLAVIACTWDTPHRV
Ga0307484_1099851	3300031663	Hardwood Forest Soil	VRLLWLLPKAAPALLRHLVGYIDLVSLDLRRAQRELVAELVISVILAICALFALLMGCLAVVAYTWDTPYRMTAIAWMGG
Ga0307484_1133832	3300031663	Hardwood Forest Soil	VRLLWLIPKAAPALLRHLIAYIDLISLDLGRAQREFAAQLVMSAVVGICGVFAVFMGCLAVVAYTWDTPHRMAAIAWMG
Ga0310686_1065897332	3300031708	Soil	VRLLWSLPKAAPALLRHLAAYVDLASLDLARSQREIAGELLASAIVGICAMFAVLMGCLAVVAYTWDTPHRMSAIAWLGGGFLLVAVVAAVYRSNAARS
Ga0307474_109308421	3300031718	Hardwood Forest Soil	VRLLWSLAKATPVLLRHLVAYVDLASLDLARAQREITAEFLASAIAAICGLFAVFMGCLVVVACTWDTPHRVSAIAWMGAGFLAA
Ga0307478_109093142	3300031823	Hardwood Forest Soil	VRLLWLLPKAAPALLRHLVGYIDLVSLDLGRAQRELVAELVISAILAICALFALLMGCLAVVAYTWDTPYRMI
Ga0316031_1069821	3300031826	Soil	VRVLWSLPKAAPALLRHLAAYVDLASLDLARSQREIAAELLASVIVGICALFAVLMGCLAVVAYTWDTPYRLGAIAWLGGGFVLAAIVA
Ga0247532_1022131	3300031827	Soil	VRLLWSLPKAAPALLRHLAAYVDLASLDFARSQREIAAELLAAAVVGICAMFAVLMGCLAVVAYTW
Ga0326631_1067661	3300032072	Soil	VRLLWSLPKAAPALLRHLAAYVDLASLDFARSQREIAAELLAATVVGICAMFAVLMGCLAVVAYTWDTPHRM
Ga0326631_1109281	3300032072	Soil	VRLLWSLPKAAPALLRHLAAYVDLAGLELARAGREIAAQIVVSAIIVICAFFALGLGCLAVIAYTWDTPHRVGAIAWMGG
Ga0348332_105393021	3300032515	Plant Litter	VRLLWSLPKAAPALLRHLVAYADLASLDLARSQREITGELLAYAIVGICAIFALLMGCIAVVAYTWDTPYRMSAIAWLGGGFV
Ga0348332_119892172	3300032515	Plant Litter	VRLLWSLPKAAPALLRHLAAYVDLASLDLARSRREIAAELLACVVVGICAMFALLMGCLAVMAYTWDTPY
Ga0348332_124002151	3300032515	Plant Litter	VRLLWSLPKAAPALLRHLAAYIDLAGLDLARAHKEIAAQLVATGIAVLCVLFAVLLGCLAVVAYTWDTPNRVSAI
Ga0348332_126765422	3300032515	Plant Litter	VRLLWSLPKAAPALLRHLSAYVDLASLDLARARREISAQIVASTIIVICAFFAVGLGCLAVIAYTWDTPHRLGAIAWMGG
Ga0348332_139596291	3300032515	Plant Litter	MRLLWSLPKAAPSLLRHLVAYIDLAGLDLARAQREITAELLASAVFAICVLFAVFMGCLAVVAYTWDTPHRVTAIAWMGGGFFALAVAAAAYRSNL
Ga0315742_121150732	3300032756	Forest Soil	MRLLWSLPKAAPALLRHLAAYVDLAGLDLAQAQGEIAAQLLAFAVVAICALFAVFMGCLLVVAYTWDTPHRVAAIAWMGGGF
Ga0334854_089078_1_204	3300033829	Soil	MSMLWSLPKAAPVLLRHLAAYVELAALDLAKAQREISAQLLASAIVAVGVFFALMMGCLAVVAATWNT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062292

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences