Basic Information | |
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Family ID | F062502 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 130 |
Average Sequence Length | 48 residues |
Representative Sequence | GFPESLADGLANLPPGLNFPPPSQGNIPAAFRGGDKRRDKKK |
Number of Associated Samples | 111 |
Number of Associated Scaffolds | 129 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 0.00 % |
% of genes from short scaffolds (< 2000 bps) | 0.00 % |
Associated GOLD sequencing projects | 108 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.30 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (100.000 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (30.769 % of family members) |
Environment Ontology (ENVO) | Unclassified (30.000 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (52.308 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 15.71% β-sheet: 0.00% Coil/Unstructured: 84.29% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.30 |
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Pfam ID | Name | % Frequency in 129 Family Scaffolds |
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PF04679 | DNA_ligase_A_C | 53.49 |
PF00384 | Molybdopterin | 7.75 |
PF02653 | BPD_transp_2 | 3.10 |
PF05973 | Gp49 | 2.33 |
PF09339 | HTH_IclR | 1.55 |
PF01520 | Amidase_3 | 1.55 |
PF09084 | NMT1 | 0.78 |
PF01381 | HTH_3 | 0.78 |
PF13458 | Peripla_BP_6 | 0.78 |
PF13379 | NMT1_2 | 0.78 |
PF01047 | MarR | 0.78 |
PF04672 | Methyltransf_19 | 0.78 |
PF03595 | SLAC1 | 0.78 |
PF13578 | Methyltransf_24 | 0.78 |
PF03704 | BTAD | 0.78 |
COG ID | Name | Functional Category | % Frequency in 129 Family Scaffolds |
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COG1793 | ATP-dependent DNA ligase | Replication, recombination and repair [L] | 53.49 |
COG3657 | Putative component of the toxin-antitoxin plasmid stabilization module | Defense mechanisms [V] | 2.33 |
COG4679 | Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system | Defense mechanisms [V] | 2.33 |
COG0860 | N-acetylmuramoyl-L-alanine amidase | Cell wall/membrane/envelope biogenesis [M] | 1.55 |
COG0715 | ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component | Inorganic ion transport and metabolism [P] | 0.78 |
COG1275 | Tellurite resistance protein TehA and related permeases | Defense mechanisms [V] | 0.78 |
COG3629 | DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain | Transcription [K] | 0.78 |
COG3947 | Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains | Transcription [K] | 0.78 |
COG4521 | ABC-type taurine transport system, periplasmic component | Inorganic ion transport and metabolism [P] | 0.78 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 100.00 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 30.77% |
Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 11.54% |
Palsa | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa | 9.23% |
Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 6.92% |
Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 6.15% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 4.62% |
Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 3.85% |
Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 3.85% |
Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 3.08% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 3.08% |
Peatland | Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland | 2.31% |
Bog Forest Soil | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil | 2.31% |
Iron-Sulfur Acid Spring | Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring | 1.54% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 1.54% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 1.54% |
Boreal Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil | 1.54% |
Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 0.77% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.77% |
Bulk Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil | 0.77% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 0.77% |
Bog Forest Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil | 0.77% |
Palsa | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa | 0.77% |
Biofilm | Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm | 0.77% |
Exposed Rock | Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock | 0.77% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300002245 | Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027) | Environmental | Open in IMG/M |
3300003505 | Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924) | Environmental | Open in IMG/M |
3300004080 | Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3 | Environmental | Open in IMG/M |
3300004635 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3 | Environmental | Open in IMG/M |
3300005537 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 | Environmental | Open in IMG/M |
3300005541 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 | Environmental | Open in IMG/M |
3300005602 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 | Environmental | Open in IMG/M |
3300005610 | Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 | Environmental | Open in IMG/M |
3300005712 | Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 | Environmental | Open in IMG/M |
3300005921 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 | Environmental | Open in IMG/M |
3300006162 | Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 | Environmental | Open in IMG/M |
3300006893 | Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG | Environmental | Open in IMG/M |
3300009090 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG | Environmental | Open in IMG/M |
3300009522 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG | Environmental | Open in IMG/M |
3300009672 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG | Environmental | Open in IMG/M |
3300009700 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG | Environmental | Open in IMG/M |
3300009839 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG | Environmental | Open in IMG/M |
3300010343 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1 | Environmental | Open in IMG/M |
3300010376 | Tropical forest soil microbial communities from Panama - MetaG Plot_28 | Environmental | Open in IMG/M |
3300010398 | Tropical forest soil microbial communities from Panama - MetaG Plot_35 | Environmental | Open in IMG/M |
3300010876 | Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300011063 | Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 15 (Metagenome Metatranscriptome) (version 2) | Environmental | Open in IMG/M |
3300011085 | Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 71 (Metagenome Metatranscriptome) (version 2) | Environmental | Open in IMG/M |
3300011120 | Combined assembly of Microbial Forest Soil metaT | Environmental | Open in IMG/M |
3300012211 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG | Environmental | Open in IMG/M |
3300014489 | Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG | Environmental | Open in IMG/M |
3300016357 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 | Environmental | Open in IMG/M |
3300017822 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2 | Environmental | Open in IMG/M |
3300017932 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4 | Environmental | Open in IMG/M |
3300017934 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3 | Environmental | Open in IMG/M |
3300017937 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4 | Environmental | Open in IMG/M |
3300017943 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4 | Environmental | Open in IMG/M |
3300017970 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG | Environmental | Open in IMG/M |
3300017972 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG | Environmental | Open in IMG/M |
3300018007 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5 | Environmental | Open in IMG/M |
3300018038 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10 | Environmental | Open in IMG/M |
3300018043 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10 | Environmental | Open in IMG/M |
3300018046 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10 | Environmental | Open in IMG/M |
3300018085 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG | Environmental | Open in IMG/M |
3300018086 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG | Environmental | Open in IMG/M |
3300021088 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M | Environmental | Open in IMG/M |
3300021374 | Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08 | Environmental | Open in IMG/M |
3300021403 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O | Environmental | Open in IMG/M |
3300021404 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O | Environmental | Open in IMG/M |
3300021432 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M | Environmental | Open in IMG/M |
3300021444 | Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02 | Environmental | Open in IMG/M |
3300021474 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O | Environmental | Open in IMG/M |
3300021476 | Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2) | Environmental | Open in IMG/M |
3300022557 | Paint Pots_combined assembly | Environmental | Open in IMG/M |
3300026361 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B | Environmental | Open in IMG/M |
3300027010 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 64 (SPAdes) | Environmental | Open in IMG/M |
3300027047 | Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF042 (SPAdes) | Environmental | Open in IMG/M |
3300027070 | Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes) | Environmental | Open in IMG/M |
3300027076 | Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF012 (SPAdes) | Environmental | Open in IMG/M |
3300027173 | Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036 (SPAdes) | Environmental | Open in IMG/M |
3300027330 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes) | Environmental | Open in IMG/M |
3300027570 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes) | Environmental | Open in IMG/M |
3300027662 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes) | Environmental | Open in IMG/M |
3300027680 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes) | Environmental | Open in IMG/M |
3300027703 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes) | Environmental | Open in IMG/M |
3300027829 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes) | Environmental | Open in IMG/M |
3300027854 | Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes) | Environmental | Open in IMG/M |
3300027857 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes) | Environmental | Open in IMG/M |
3300027889 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes) | Environmental | Open in IMG/M |
3300027895 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes) | Environmental | Open in IMG/M |
3300028780 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2 | Environmental | Open in IMG/M |
3300028808 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2 | Environmental | Open in IMG/M |
3300029943 | I_Palsa_N3 coassembly | Environmental | Open in IMG/M |
3300029951 | III_Palsa_N1 coassembly | Environmental | Open in IMG/M |
3300029999 | I_Palsa_E3 coassembly | Environmental | Open in IMG/M |
3300030013 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3 | Environmental | Open in IMG/M |
3300030056 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3 | Environmental | Open in IMG/M |
3300030494 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2) | Environmental | Open in IMG/M |
3300030509 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2 | Environmental | Open in IMG/M |
3300030531 | Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO143-VCO038SO (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300030580 | II_Palsa_N1 coassembly | Environmental | Open in IMG/M |
3300030618 | II_Palsa_E3 coassembly | Environmental | Open in IMG/M |
3300030906 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3 | Environmental | Open in IMG/M |
3300031543 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20 | Environmental | Open in IMG/M |
3300031544 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26 | Environmental | Open in IMG/M |
3300031561 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26 | Environmental | Open in IMG/M |
3300031564 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21 | Environmental | Open in IMG/M |
3300031680 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22 | Environmental | Open in IMG/M |
3300031708 | FICUS49499 Metagenome Czech Republic combined assembly | Environmental | Open in IMG/M |
3300031713 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22 | Environmental | Open in IMG/M |
3300031723 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23 | Environmental | Open in IMG/M |
3300031736 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21 | Environmental | Open in IMG/M |
3300031747 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22 | Environmental | Open in IMG/M |
3300031764 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27 | Environmental | Open in IMG/M |
3300031765 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22 | Environmental | Open in IMG/M |
3300031771 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19 | Environmental | Open in IMG/M |
3300031782 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20 | Environmental | Open in IMG/M |
3300031797 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23 | Environmental | Open in IMG/M |
3300031821 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20 | Environmental | Open in IMG/M |
3300031845 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18 | Environmental | Open in IMG/M |
3300031859 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25 | Environmental | Open in IMG/M |
3300031890 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2) | Environmental | Open in IMG/M |
3300031894 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18 | Environmental | Open in IMG/M |
3300031897 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16 | Environmental | Open in IMG/M |
3300031910 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2) | Environmental | Open in IMG/M |
3300031941 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080 | Environmental | Open in IMG/M |
3300032008 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18 | Environmental | Open in IMG/M |
3300032041 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22 | Environmental | Open in IMG/M |
3300032043 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24 | Environmental | Open in IMG/M |
3300032063 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17 | Environmental | Open in IMG/M |
3300032064 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17 | Environmental | Open in IMG/M |
3300032068 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21 | Environmental | Open in IMG/M |
3300032160 | Sb_50d combined assembly (MetaSPAdes) | Environmental | Open in IMG/M |
3300032261 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2) | Environmental | Open in IMG/M |
3300032898 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1 | Environmental | Open in IMG/M |
3300033290 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
JGIcombinedJ26739_1003306581 | 3300002245 | Forest Soil | AQDQSGQTPASPGTGLGALPEGFPQSLADGLANLPPGLNFPPPAQDNIPAAFKRRDKKK* |
JGIcombinedJ51221_101185311 | 3300003505 | Forest Soil | LPEGFPEGIADGLANLPPGLNFPSPAQGNIPAAFRGGANKRRDKKK* |
JGIcombinedJ51221_101409361 | 3300003505 | Forest Soil | GAQDIAAALGGQGAPGLGGLPEGFADSLTEGLAGLQPGLNFPPATPGSNIPAAFRGDPKRRKKK* |
Ga0062385_109884892 | 3300004080 | Bog Forest Soil | LGGAGGLGGLPGGLPEGFPESLADGLANLPPGLNFPGGAQGNIPAAFRGGNKRKKKLRDRT* |
Ga0062388_1008352571 | 3300004635 | Bog Forest Soil | GGGLPEGFSDSLADGLANLPPGLNFPPPQQQGNVPAAFRGGNPKRRKKK* |
Ga0070730_103756691 | 3300005537 | Surface Soil | GFPESLADGLANLPPGLNFPPPSQGNIPAAFRGGDKRRDNKKK* |
Ga0070730_106465571 | 3300005537 | Surface Soil | GFPESLADGLANLPPGLNFPPPSQGNIPAAFRGGDKRRDKKK* |
Ga0070733_105040561 | 3300005541 | Surface Soil | AGGAPAGLGGAAGLGGLPEGFPQDLADGLANLPSGLNFPPPSQGNVPAAFRGGNKRRDKKK* |
Ga0070762_110397141 | 3300005602 | Soil | EGFPESLAEGLANMPPGLNFPAPSQGNVPAAFRGGNKRKKK* |
Ga0070763_108746922 | 3300005610 | Soil | PGGGLGGLGGLPEGFSDQLADGLANLPSGLNFPPPSQGNVPAAFRGGNPKRRDKKK* |
Ga0070764_103057452 | 3300005712 | Soil | GLTDELAKLQPGLNFPPPSPGNVPAAFKRRDKKK* |
Ga0070766_108869221 | 3300005921 | Soil | GFPESIADGLANLPPGLNFPTPSQGNIPAAFRGGNKRRDKK* |
Ga0075030_1006161211 | 3300006162 | Watersheds | ESLADGLANLPPGLNFPGGAQSNIPAAFRGGNKRKKKLRDRT* |
Ga0073928_101195071 | 3300006893 | Iron-Sulfur Acid Spring | PESLADGLANLPSGLNFPPPQQGNVPAAFRGNKRRDKKK* |
Ga0099827_106574991 | 3300009090 | Vadose Zone Soil | GGPAGLGGLGGGLPEGFPESLADQLANMPGIPPSAQGNIPAAFRGGNKRKKK* |
Ga0116218_13893281 | 3300009522 | Peatlands Soil | GFPESLADGLANLPPGLNFPPPAQGNIPAAFRGGNKRKKK* |
Ga0116215_10352581 | 3300009672 | Peatlands Soil | SLADGLANLPPGLNFPPPAQGNIPAAFRGGNKRKKK* |
Ga0116215_10699082 | 3300009672 | Peatlands Soil | PEGFPESLADGLANLPPGLNFPPPAQGNIPAAFRGGNKRKKK* |
Ga0116217_101853942 | 3300009700 | Peatlands Soil | GLANLPPGLNFPPPQQPGNIPAAFRGGNNKRRDKKK* |
Ga0116217_105685382 | 3300009700 | Peatlands Soil | ADGLANLPPGLNFPPPAQGNIPAAFRGGNKRKKK* |
Ga0116223_100495251 | 3300009839 | Peatlands Soil | LPEGFPESLADGLANLPPGLNFPPPAQGNIPAAFRGGNKRKKK* |
Ga0074044_110969462 | 3300010343 | Bog Forest Soil | GGLPGGLPEGFPESLADGLANLPPGLNFPGGAQGNIPAAFRGGNKRKKKLRDRT* |
Ga0126381_1050878171 | 3300010376 | Tropical Forest Soil | QTAPAGLGGAGGLGGLPEGFPENFADDLANLPSGLNFPPPSQGNIPAAFRGGTNKRRDKKK* |
Ga0126383_106353872 | 3300010398 | Tropical Forest Soil | LGGFGGLPGGLPEGFPESLADGLAGLQPGLNPPPQPQGNIPAAFRGGGKRKKK* |
Ga0126361_100629121 | 3300010876 | Boreal Forest Soil | QGPAGQPGLGALGGVGGLPEGFSESLADGLANLPNFPVPQQDNVPAAFRGKRKKK* |
Ga0126361_111365624 | 3300010876 | Boreal Forest Soil | PQSLADGLANLPPGLNFPPPAQDNIPAAFKRRDKKK* |
Ga0138537_10390852 | 3300011063 | Peatlands Soil | FPESLADGLANLPPGLNFPPPAQGNIPAAFRGGNKRKKK* |
Ga0138581_11437702 | 3300011085 | Peatlands Soil | GAGGLGGLPGGGLPEGFPESLADGLANLPPGLNFPPPAQGNIPAAFRGGNKRKKK* |
Ga0150983_157476161 | 3300011120 | Forest Soil | PAGPGITGTGLPEGFPESLADGLANLPPGLNFPSPAQDNIPAAFRGGNNKRRDKKK* |
Ga0137377_118399212 | 3300012211 | Vadose Zone Soil | FPESLADQLANMPSIPPSAQGNIPAAFRGGNKRKKK* |
Ga0182018_107618111 | 3300014489 | Palsa | AAPAIPGLGGLPGGLPEGFPENLADGLANLPPGLNFPSPSQGNVPAAFRGGKRRDKKLVTPG* |
Ga0182032_104914092 | 3300016357 | Soil | LPEGFPEELAEGLANLPSGLNFPPSSQGNIPAAFRGGTNKRRDQKK |
Ga0187802_102423591 | 3300017822 | Freshwater Sediment | DQLANLPSGLNFPPPSQGNVPAAFRGGKAKRRDKN |
Ga0187814_101571842 | 3300017932 | Freshwater Sediment | LPQGFPEDLAEGLANLQPGLNFPPPSQGNIPAAFRGGNKRRDKRK |
Ga0187803_104053002 | 3300017934 | Freshwater Sediment | GGPGAGGLGGLPPGFPEDLAEGLANLQPGLNFPPASPGNIPAAFRGGNKRRDKRK |
Ga0187809_100783321 | 3300017937 | Freshwater Sediment | APPGLGGPGSLGGLGGLPEGFPDSLAEGLANLQPGLNFPPSSPGHIPAAFRGGNNKRRDKKK |
Ga0187809_102819192 | 3300017937 | Freshwater Sediment | GDLGDLGDLGGLPEGFADQLANLPSGLNFPLPSQGNVPAAFRGGNAKRRDKKK |
Ga0187809_103652882 | 3300017937 | Freshwater Sediment | FPENLADGLAGLPPGLNFPPPSQGNIPAAFRGGGNKRRDKKK |
Ga0187819_104609433 | 3300017943 | Freshwater Sediment | AGGLGGAGGLGNLPEGFQESLADGLANLNFPPPSQGNIPAAFRGGSNKRRDKKK |
Ga0187783_111993101 | 3300017970 | Tropical Peatland | GLAGLQPGLQFPPPKQGSNVPAAFRGDPKRRDKKK |
Ga0187781_100828244 | 3300017972 | Tropical Peatland | LRGQGSDRVDGVGLGGLPEGFADQLANLPSGLNFPAPPQGNVPAAFRGGNAKRRDKKK |
Ga0187781_100828245 | 3300017972 | Tropical Peatland | DQLANLPSGLNFPPPAQGNVPAAFRGGNSKRRDKKK |
Ga0187805_102515702 | 3300018007 | Freshwater Sediment | FTDSLADGLANLPPGLNFPPPAQGNIPAAFRGNNKRRDKQK |
Ga0187855_102336632 | 3300018038 | Peatland | LADGLANLPPGLNFPSPSQGNVPAAFRGGKRRDKKLVTPG |
Ga0187887_101849463 | 3300018043 | Peatland | FGESLADGLANLPPGLNFPSPAQDNVPAAFRANPNAKRRKKK |
Ga0187851_101863121 | 3300018046 | Peatland | GGLPEGFPESLADGLANLPPGLNFPGGAQSNIPAAFRGGNKRKKK |
Ga0187772_103630433 | 3300018085 | Tropical Peatland | GLGGLPEGFPDNIADGLAGLQPGLNFPPPGQGNIPAAFRGGSNKRRDKK |
Ga0187769_101371693 | 3300018086 | Tropical Peatland | SAPAGLGGTSGLPGGLDGLGGLPEGFADQLANLPAGLNFPPPSQGNVPAAFRGGGAKRRDKKK |
Ga0210404_107932111 | 3300021088 | Soil | FPESLAEGLANMPPGLNFPPPSQGNIPAAFRGGNKRKKK |
Ga0213881_100105991 | 3300021374 | Exposed Rock | GLGGLGGNLPEGFPDRLADELANLPPGLNFPAAPQGNVPAAFRGNGKRRNKKK |
Ga0210397_101728851 | 3300021403 | Soil | GFPEGFPESLADGLANLPPGLNFPSPAQDNIPAAFRGGNNKRRDKKK |
Ga0210389_114801462 | 3300021404 | Soil | LGLPEGFPESLADGLANLPPGLNFPSPAQDNIPAAFRGGNNKRRDKKK |
Ga0210384_118955452 | 3300021432 | Soil | ALGGPGGLGGLPGGLPEGFPESLADGLANLPPGLNFPSASSAQGNIPAAFRGGNKRKKK |
Ga0213878_101509982 | 3300021444 | Bulk Soil | LPEGFPESLADSLANLPPGLNFPSPSQGDIPAAFRGGKPKRRDKK |
Ga0210390_114391712 | 3300021474 | Soil | AGAGGLPGGGLPAGLPEGFPESLAEGLANMPPGLNFPPPSQGNIPAAFRGGNKRKKK |
Ga0187846_100032249 | 3300021476 | Biofilm | ADGLAGLQPGGLQFPSPKQTNVPAAFRGNPKRRDKNK |
Ga0212123_102848561 | 3300022557 | Iron-Sulfur Acid Spring | ADGLANLPSGLNFPPPQQGNVPAAFRGNKRRDKKK |
Ga0257176_10656332 | 3300026361 | Soil | LADGLANLPPGLNFPSPAQNNIPAAFRGGNNKRRDKKK |
Ga0207839_10239962 | 3300027010 | Tropical Forest Soil | LGGLPEGLADQLANLPSGLNFPSPSQGNVPAAFRGGNAKRRDKKK |
Ga0208730_10138041 | 3300027047 | Forest Soil | PAGVGGLGTGLGGLPEGFPESLADGLANLPPGLNFPSPAQDNIPAAFRGGNNKRRDKKK |
Ga0208365_10233612 | 3300027070 | Forest Soil | AGLPGGGLPEGFPENLAEGLANLPPGLNFPPPAQGNIPAAFRGGNKRKKK |
Ga0208860_10091132 | 3300027076 | Forest Soil | FSDQLADGLANLPSGLNFPPPSQGNVPAAFRGGNPKRRDKKK |
Ga0208097_10076271 | 3300027173 | Forest Soil | GGLPAGGLPEGFPESLADGLANLPPGLNFPPPSQGNIPAAFRGGNKRKKK |
Ga0207777_10952742 | 3300027330 | Tropical Forest Soil | GGPGCLGPGGLDGLGGLPEGLADQLANLPSGLNFPSPSQGNVPAAFRGGNAKRRDKKK |
Ga0208043_10860521 | 3300027570 | Peatlands Soil | EGLANLPPGLNFPPPQQPGNIPAAFRGGNNKRRDKKK |
Ga0208043_11163961 | 3300027570 | Peatlands Soil | GGLGGLGGLPGGLPEGFPENLAEGLANLPPGLNFPPPSQGNIPAAFRGGNKRKKK |
Ga0208565_10963982 | 3300027662 | Peatlands Soil | ESLADGLANLPPGLNFPPPAQGNIPAAFRGGNKRKKK |
Ga0207826_12209112 | 3300027680 | Tropical Forest Soil | GLDGLGGLPEGLADQLANLPSGLNFPSPSQGNVPAAFRGGNAKRRDKKK |
Ga0207862_10617261 | 3300027703 | Tropical Forest Soil | GGGPQNPPSGLGGLGGLPEGFPENIADGLANLQPGLNFPPPGQGNIPAAFRGGNNKRRDK |
Ga0209773_102317261 | 3300027829 | Bog Forest Soil | GAGGLGGLPEGFTDSLAEGLSNLPVGLNFPPPAQGNIPAAFRGGNKRRDKKK |
Ga0209517_102092422 | 3300027854 | Peatlands Soil | PGGLPEGFPENLAEGLANLPPGLNFPPPSQGNIPAAFRGGNKRKKK |
Ga0209166_105236053 | 3300027857 | Surface Soil | PEGFPESLADGLANLPPGLNFPPPSQGNIPAAFRGGDKRRDNKKK |
Ga0209380_106060312 | 3300027889 | Soil | GGLGTGLGGLPEGFPESIADGLANLPSGLNFPVPAQDNIPAAFRGNNKRRDKKK |
Ga0209624_110986652 | 3300027895 | Forest Soil | GGLPEGFADSLTEGLAGLQPGLNFPPTAPGNIPAAFRGDPKRRKKK |
Ga0302225_101863582 | 3300028780 | Palsa | AAPAVPGLGAAGLGNRDGLPGGLPEGFPESLAEGLANLPPGLNFPSPSQGNVPAAFRGGKRRDKRK |
Ga0302228_104015761 | 3300028808 | Palsa | GLPGGLPEGFPESLADGLANLPPGLNFPSPPQGNVPAAFRGGKRRDKRK |
Ga0311340_100483246 | 3300029943 | Palsa | GAGGLGGLAGLPDGFPESLADGLANLPPGLNFPPPAQGNIPAAFRANPKRRDKNDKNK |
Ga0311371_101160361 | 3300029951 | Palsa | LGALGGLPDGFPDNLAEGLANLPPGLSFPPPQPGNNNIPAAFRGGGKRKKK |
Ga0311339_110530261 | 3300029999 | Palsa | LGALGALPGGLPDGFPDNLAEGLANLPPGLSFPPPQPGNNNIPAAFRGGGKRKKK |
Ga0302178_101225263 | 3300030013 | Palsa | LPDGFPESLADGLANLPPGLNFPPPAQGNIPAAFRANPKRRDKNDKNK |
Ga0302181_100143355 | 3300030056 | Palsa | VPGLGAGGLGIRDGLPGGLPEGFPESLADGLANLPPGLNFPSPPQGNVPAAFRGGKRRDKRK |
Ga0302181_101325852 | 3300030056 | Palsa | GFPESLADGLANLPPGLNFPSPSQGNVPAAFRGGKRRDKRK |
Ga0310037_103138631 | 3300030494 | Peatlands Soil | PESLADGLANLPPGLNFPPPAQGNIPAAFRGGNKRKKK |
Ga0302183_101514971 | 3300030509 | Palsa | GALGALPGGLPDGFPDNLAEGLANLPPGLSFPPPQPGNNNIPAAFRGGGKRKKK |
Ga0210274_12750861 | 3300030531 | Soil | FGESIADGLANLPPGLNFPSPAQGNIPAAFRGGNNKRRDKKK |
Ga0311355_118777292 | 3300030580 | Palsa | GGLPDGFPDNLAEGLANLPPGLSFPPPQPGNNNIPAAFRGGGKRKKK |
Ga0311354_101064401 | 3300030618 | Palsa | GLGAGGLGGLGGLPEGFPESLADGLANLPPGLNFPPPAQGNIPAAFRGNPKRRDKNDKNK |
Ga0302314_105087844 | 3300030906 | Palsa | LGALPGGLPDGFPDNLAEGLANLPPGLSFPPPQPGNNNIPAAFRGGGKRKKK |
Ga0318516_102000191 | 3300031543 | Soil | LGPAGLGGLPEGFADQLANLPSGLNFPPPSQGNVPAAFRGGNAKRRDKKK |
Ga0318534_105663482 | 3300031544 | Soil | PEGLSDQLANLPSGLNFPPPSQGNVPAAFRGGNAKRRDKKK |
Ga0318528_106616791 | 3300031561 | Soil | GGLPEGFADQLANLPSGLNFPPPSQGNVPAAFRGGNAKRRDKKK |
Ga0318573_107991121 | 3300031564 | Soil | PEGFPDSLAEGLANLNFPPPSQGNIPAAFRGGDNKRRDKKK |
Ga0318574_103784642 | 3300031680 | Soil | GLGGLPEGLSDQLANLPSGLNFPPPSQGNVPAAFRGGNAKRRDKKK |
Ga0310686_1041142962 | 3300031708 | Soil | DGLANLPSGLNFPPPPQGNVPAAFRGNPKRRDKKK |
Ga0318496_100899741 | 3300031713 | Soil | PAGLGGLPEGFADQLANLPSGLNFPPPSQGNVPAAFRGGNAKRRDKKK |
Ga0318496_102470631 | 3300031713 | Soil | VWGPPWPGGLGEASGLGGLGGLPEGFPEELAEGLANLPSGLNFPPSSQGNIPAAFRGGTNKRRDQKK |
Ga0318493_100927001 | 3300031723 | Soil | LGPGGLGGLPEGLSDQLANLPSGLNFPPPSQGNVPAAFRGGNAKRRDKKK |
Ga0318493_101616401 | 3300031723 | Soil | AIPAELGGAGGLGPAGLGGLPEGFADQLANLPSGLNFPPPSQGNVPAAFRGGNAKRRDKK |
Ga0318493_107369442 | 3300031723 | Soil | VPGGLPEGFPESLADELANLPPGLNFPPQPQGNIPAAFRGGGKGRKKK |
Ga0318501_103224571 | 3300031736 | Soil | PGGLGGLPEGLSDQLANLPSGLNFPPPSQGNVPAAFRGGNAKRRDKKK |
Ga0318502_102137581 | 3300031747 | Soil | FPDSLAEGLANLNFPPPSQGNIPAAFRGGDNKRRDKKK |
Ga0318535_101461653 | 3300031764 | Soil | AGLGGLPEGFADQLANLPSGLNFPPPSQGNVPAAFRGGNAKRRDKKK |
Ga0318554_108240882 | 3300031765 | Soil | LGSGGLGGLPEGFPESLADGLANLPSGLNFPPPSQGNIPAAFRGGTNKRRDKKK |
Ga0318546_103536431 | 3300031771 | Soil | LGPAGLGGLPEGLSDQLANLPSGLNFPPPSQGNVPAAFRGGNAKRRDKKK |
Ga0318552_100510781 | 3300031782 | Soil | GGLPEGFPESIADGLANLPSGLNFPPPSQGDIPAAFRGGTGKRRDKKK |
Ga0318552_100906623 | 3300031782 | Soil | GGAGGLGPAGLGGLPEGFADQLANLPSGLNFPPPSQGNVPAAFRGGNAKRRDKKK |
Ga0318550_103921132 | 3300031797 | Soil | GLPEGFADQLANLPSGLNFPPPSQGNVPAAFRGGNAKRRDKKK |
Ga0318567_100199931 | 3300031821 | Soil | ELAEGLANLPSGLNFPPSSQGNIPAAFRGGTNKRRDQKK |
Ga0318567_105655151 | 3300031821 | Soil | EGFADQLANLPSGLNFPPPSQGNVPAAFRGGNAKRRDKKK |
Ga0318511_100201562 | 3300031845 | Soil | ASGLGGLGGLPEGFPEELAEGLANLPSGLNFPPSSQGNIPAAFRGGTNKRRDQKK |
Ga0318527_101134072 | 3300031859 | Soil | EELAEGLANLPSGLNFPPPSQGNIPAAFRGGTNKGRDKKK |
Ga0306925_106927132 | 3300031890 | Soil | SGLGGLGGLPEGFPEELAEGLANLPSGLNFPPPSQGNIPAAFRGGTNKGRDKKK |
Ga0306925_118108762 | 3300031890 | Soil | GLGGLGGLPEGFPEELAEGLANLPSGLNFPPPSQSNVPAAFRGGTNKGRDKKK |
Ga0318522_103062251 | 3300031894 | Soil | FPDSLAEGLANLNFPPSSQGNIPAAFRGGDNKRRDKKK |
Ga0318520_110293332 | 3300031897 | Soil | ELAEGLANLPSGLNFPPPSQGNIPAAFRGGTNKGRDKKK |
Ga0306923_114837122 | 3300031910 | Soil | GLGSLPEGFPDSLAEGLANLNFPPPSQGNIPAAFRGGDNKRRDKKK |
Ga0306923_125014551 | 3300031910 | Soil | GQRSGGVGGLGGVPGGLPEGFPENLADELANLPPGLNFPPQPQGNIPAAFRGGGKGRKKK |
Ga0310912_107362251 | 3300031941 | Soil | GPGGLGGLPEGLSDQLANLPSGLNFPPPSQGNVPAAFRGGNAKRRDKKK |
Ga0318562_102072152 | 3300032008 | Soil | GFGGLPEGFPENIADGLANLPSGLNFPPPSQGNIPAAFRGGTSKRRDKKK |
Ga0318549_101057941 | 3300032041 | Soil | IPAELGGAGGLGPAGLGGLPEGFADQLANLPSGLNFPPPSQGNVPAAFRGGNAKRRDKKK |
Ga0318556_100698461 | 3300032043 | Soil | AGGLGPGGLGGLPEGLSDQLANLPSGLNFPPPSQGNVPAAFRGGNAKRRDKKK |
Ga0318504_101735981 | 3300032063 | Soil | EASGLGGLGGLPEGFPEELAEGLANLPSGLNFPPSSQGNIPAAFRGGTNKRRDQKK |
Ga0318510_100612781 | 3300032064 | Soil | DQLANLPSGLNFPPPSQGNVPAAFRGGNAKRRDKKK |
Ga0318510_103544661 | 3300032064 | Soil | LPGGPGDLSGLGGLPEGFADQLANLPSGLSFPAPSQGNVPAAFRGGNPKRRDKKK |
Ga0318553_101857133 | 3300032068 | Soil | GFADQLANLPSGLNFPPPSQGNVPAAFRGGNAKRRDKKK |
Ga0311301_102508385 | 3300032160 | Peatlands Soil | PEGFPESLADGLANLPPGLNFPPPAQGNIPAAFRGGNKRKKK |
Ga0311301_104574103 | 3300032160 | Peatlands Soil | GGLGGLPGGGLPEGSPENLAEGLANLPPGLNFPPPSQGNIPAAFRGGNKRKKK |
Ga0306920_1038485142 | 3300032261 | Soil | GFPESLADGLANLPSGLNFPPPSQGNIPAAFRGGKPKRRDKKN |
Ga0335072_102415824 | 3300032898 | Soil | LQESLTEGLANLNFPPPAQGNIPAAFRGGRNKRRDDKKD |
Ga0318519_100572722 | 3300033290 | Soil | AAGLGEASGLGGLGGLPEGFPEELAEGLANLPSGLNFPPSSQGNIPAAFRGGTNKRRDQK |
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