NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F062502

Metagenome / Metatranscriptome Family F062502

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F062502
Family Type Metagenome / Metatranscriptome
Number of Sequences 130
Average Sequence Length 48 residues
Representative Sequence GFPESLADGLANLPPGLNFPPPSQGNIPAAFRGGDKRRDKKK
Number of Associated Samples 111
Number of Associated Scaffolds 129

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 108
AlphaFold2 3D model prediction Yes
3D model pTM-score0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(30.769 % of family members)
Environment Ontology (ENVO) Unclassified
(30.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(52.308 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 15.71%    β-sheet: 0.00%    Coil/Unstructured: 84.29%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 129 Family Scaffolds
PF04679DNA_ligase_A_C 53.49
PF00384Molybdopterin 7.75
PF02653BPD_transp_2 3.10
PF05973Gp49 2.33
PF09339HTH_IclR 1.55
PF01520Amidase_3 1.55
PF09084NMT1 0.78
PF01381HTH_3 0.78
PF13458Peripla_BP_6 0.78
PF13379NMT1_2 0.78
PF01047MarR 0.78
PF04672Methyltransf_19 0.78
PF03595SLAC1 0.78
PF13578Methyltransf_24 0.78
PF03704BTAD 0.78

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 129 Family Scaffolds
COG1793ATP-dependent DNA ligaseReplication, recombination and repair [L] 53.49
COG3657Putative component of the toxin-antitoxin plasmid stabilization moduleDefense mechanisms [V] 2.33
COG4679Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin systemDefense mechanisms [V] 2.33
COG0860N-acetylmuramoyl-L-alanine amidaseCell wall/membrane/envelope biogenesis [M] 1.55
COG0715ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic componentInorganic ion transport and metabolism [P] 0.78
COG1275Tellurite resistance protein TehA and related permeasesDefense mechanisms [V] 0.78
COG3629DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domainTranscription [K] 0.78
COG3947Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domainsTranscription [K] 0.78
COG4521ABC-type taurine transport system, periplasmic componentInorganic ion transport and metabolism [P] 0.78


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Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil30.77%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil11.54%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa9.23%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil6.92%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment6.15%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.62%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland3.85%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil3.85%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil3.08%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.08%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.31%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil2.31%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring1.54%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.54%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.54%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil1.54%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.77%
Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil0.77%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.77%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.77%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa0.77%
BiofilmEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm0.77%
Exposed RockEnvironmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock0.77%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300003505Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)EnvironmentalOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004635Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009522Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaGEnvironmentalOpen in IMG/M
3300009672Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaGEnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010876Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011063Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 15 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011085Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 71 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300014489Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaGEnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300017822Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2EnvironmentalOpen in IMG/M
3300017932Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4EnvironmentalOpen in IMG/M
3300017934Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3EnvironmentalOpen in IMG/M
3300017937Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4EnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300018007Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5EnvironmentalOpen in IMG/M
3300018038Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10EnvironmentalOpen in IMG/M
3300018043Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10EnvironmentalOpen in IMG/M
3300018046Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10EnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021374Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08EnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021444Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02EnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021476Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)EnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300026361Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-BEnvironmentalOpen in IMG/M
3300027010Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 64 (SPAdes)EnvironmentalOpen in IMG/M
3300027047Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF042 (SPAdes)EnvironmentalOpen in IMG/M
3300027070Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)EnvironmentalOpen in IMG/M
3300027076Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF012 (SPAdes)EnvironmentalOpen in IMG/M
3300027173Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036 (SPAdes)EnvironmentalOpen in IMG/M
3300027330Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)EnvironmentalOpen in IMG/M
3300027570Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027662Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027680Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)EnvironmentalOpen in IMG/M
3300027703Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)EnvironmentalOpen in IMG/M
3300027829Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027854Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)EnvironmentalOpen in IMG/M
3300027857Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027895Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300028780Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2EnvironmentalOpen in IMG/M
3300028808Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2EnvironmentalOpen in IMG/M
3300029943I_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300029951III_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030013Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3EnvironmentalOpen in IMG/M
3300030056Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3EnvironmentalOpen in IMG/M
3300030494Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)EnvironmentalOpen in IMG/M
3300030509Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2EnvironmentalOpen in IMG/M
3300030531Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO143-VCO038SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030580II_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300030618II_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030906Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3EnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031544Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26EnvironmentalOpen in IMG/M
3300031561Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26EnvironmentalOpen in IMG/M
3300031564Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031713Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22EnvironmentalOpen in IMG/M
3300031723Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031747Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22EnvironmentalOpen in IMG/M
3300031764Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27EnvironmentalOpen in IMG/M
3300031765Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031782Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20EnvironmentalOpen in IMG/M
3300031797Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23EnvironmentalOpen in IMG/M
3300031821Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20EnvironmentalOpen in IMG/M
3300031845Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18EnvironmentalOpen in IMG/M
3300031859Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031894Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18EnvironmentalOpen in IMG/M
3300031897Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300032008Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18EnvironmentalOpen in IMG/M
3300032041Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22EnvironmentalOpen in IMG/M
3300032043Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24EnvironmentalOpen in IMG/M
3300032063Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17EnvironmentalOpen in IMG/M
3300032064Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17EnvironmentalOpen in IMG/M
3300032068Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032898Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGIcombinedJ26739_10033065813300002245Forest SoilAQDQSGQTPASPGTGLGALPEGFPQSLADGLANLPPGLNFPPPAQDNIPAAFKRRDKKK*
JGIcombinedJ51221_1011853113300003505Forest SoilLPEGFPEGIADGLANLPPGLNFPSPAQGNIPAAFRGGANKRRDKKK*
JGIcombinedJ51221_1014093613300003505Forest SoilGAQDIAAALGGQGAPGLGGLPEGFADSLTEGLAGLQPGLNFPPATPGSNIPAAFRGDPKRRKKK*
Ga0062385_1098848923300004080Bog Forest SoilLGGAGGLGGLPGGLPEGFPESLADGLANLPPGLNFPGGAQGNIPAAFRGGNKRKKKLRDRT*
Ga0062388_10083525713300004635Bog Forest SoilGGGLPEGFSDSLADGLANLPPGLNFPPPQQQGNVPAAFRGGNPKRRKKK*
Ga0070730_1037566913300005537Surface SoilGFPESLADGLANLPPGLNFPPPSQGNIPAAFRGGDKRRDNKKK*
Ga0070730_1064655713300005537Surface SoilGFPESLADGLANLPPGLNFPPPSQGNIPAAFRGGDKRRDKKK*
Ga0070733_1050405613300005541Surface SoilAGGAPAGLGGAAGLGGLPEGFPQDLADGLANLPSGLNFPPPSQGNVPAAFRGGNKRRDKKK*
Ga0070762_1103971413300005602SoilEGFPESLAEGLANMPPGLNFPAPSQGNVPAAFRGGNKRKKK*
Ga0070763_1087469223300005610SoilPGGGLGGLGGLPEGFSDQLADGLANLPSGLNFPPPSQGNVPAAFRGGNPKRRDKKK*
Ga0070764_1030574523300005712SoilGLTDELAKLQPGLNFPPPSPGNVPAAFKRRDKKK*
Ga0070766_1088692213300005921SoilGFPESIADGLANLPPGLNFPTPSQGNIPAAFRGGNKRRDKK*
Ga0075030_10061612113300006162WatershedsESLADGLANLPPGLNFPGGAQSNIPAAFRGGNKRKKKLRDRT*
Ga0073928_1011950713300006893Iron-Sulfur Acid SpringPESLADGLANLPSGLNFPPPQQGNVPAAFRGNKRRDKKK*
Ga0099827_1065749913300009090Vadose Zone SoilGGPAGLGGLGGGLPEGFPESLADQLANMPGIPPSAQGNIPAAFRGGNKRKKK*
Ga0116218_138932813300009522Peatlands SoilGFPESLADGLANLPPGLNFPPPAQGNIPAAFRGGNKRKKK*
Ga0116215_103525813300009672Peatlands SoilSLADGLANLPPGLNFPPPAQGNIPAAFRGGNKRKKK*
Ga0116215_106990823300009672Peatlands SoilPEGFPESLADGLANLPPGLNFPPPAQGNIPAAFRGGNKRKKK*
Ga0116217_1018539423300009700Peatlands SoilGLANLPPGLNFPPPQQPGNIPAAFRGGNNKRRDKKK*
Ga0116217_1056853823300009700Peatlands SoilADGLANLPPGLNFPPPAQGNIPAAFRGGNKRKKK*
Ga0116223_1004952513300009839Peatlands SoilLPEGFPESLADGLANLPPGLNFPPPAQGNIPAAFRGGNKRKKK*
Ga0074044_1109694623300010343Bog Forest SoilGGLPGGLPEGFPESLADGLANLPPGLNFPGGAQGNIPAAFRGGNKRKKKLRDRT*
Ga0126381_10508781713300010376Tropical Forest SoilQTAPAGLGGAGGLGGLPEGFPENFADDLANLPSGLNFPPPSQGNIPAAFRGGTNKRRDKKK*
Ga0126383_1063538723300010398Tropical Forest SoilLGGFGGLPGGLPEGFPESLADGLAGLQPGLNPPPQPQGNIPAAFRGGGKRKKK*
Ga0126361_1006291213300010876Boreal Forest SoilQGPAGQPGLGALGGVGGLPEGFSESLADGLANLPNFPVPQQDNVPAAFRGKRKKK*
Ga0126361_1113656243300010876Boreal Forest SoilPQSLADGLANLPPGLNFPPPAQDNIPAAFKRRDKKK*
Ga0138537_103908523300011063Peatlands SoilFPESLADGLANLPPGLNFPPPAQGNIPAAFRGGNKRKKK*
Ga0138581_114377023300011085Peatlands SoilGAGGLGGLPGGGLPEGFPESLADGLANLPPGLNFPPPAQGNIPAAFRGGNKRKKK*
Ga0150983_1574761613300011120Forest SoilPAGPGITGTGLPEGFPESLADGLANLPPGLNFPSPAQDNIPAAFRGGNNKRRDKKK*
Ga0137377_1183992123300012211Vadose Zone SoilFPESLADQLANMPSIPPSAQGNIPAAFRGGNKRKKK*
Ga0182018_1076181113300014489PalsaAAPAIPGLGGLPGGLPEGFPENLADGLANLPPGLNFPSPSQGNVPAAFRGGKRRDKKLVTPG*
Ga0182032_1049140923300016357SoilLPEGFPEELAEGLANLPSGLNFPPSSQGNIPAAFRGGTNKRRDQKK
Ga0187802_1024235913300017822Freshwater SedimentDQLANLPSGLNFPPPSQGNVPAAFRGGKAKRRDKN
Ga0187814_1015718423300017932Freshwater SedimentLPQGFPEDLAEGLANLQPGLNFPPPSQGNIPAAFRGGNKRRDKRK
Ga0187803_1040530023300017934Freshwater SedimentGGPGAGGLGGLPPGFPEDLAEGLANLQPGLNFPPASPGNIPAAFRGGNKRRDKRK
Ga0187809_1007833213300017937Freshwater SedimentAPPGLGGPGSLGGLGGLPEGFPDSLAEGLANLQPGLNFPPSSPGHIPAAFRGGNNKRRDKKK
Ga0187809_1028191923300017937Freshwater SedimentGDLGDLGDLGGLPEGFADQLANLPSGLNFPLPSQGNVPAAFRGGNAKRRDKKK
Ga0187809_1036528823300017937Freshwater SedimentFPENLADGLAGLPPGLNFPPPSQGNIPAAFRGGGNKRRDKKK
Ga0187819_1046094333300017943Freshwater SedimentAGGLGGAGGLGNLPEGFQESLADGLANLNFPPPSQGNIPAAFRGGSNKRRDKKK
Ga0187783_1119931013300017970Tropical PeatlandGLAGLQPGLQFPPPKQGSNVPAAFRGDPKRRDKKK
Ga0187781_1008282443300017972Tropical PeatlandLRGQGSDRVDGVGLGGLPEGFADQLANLPSGLNFPAPPQGNVPAAFRGGNAKRRDKKK
Ga0187781_1008282453300017972Tropical PeatlandDQLANLPSGLNFPPPAQGNVPAAFRGGNSKRRDKKK
Ga0187805_1025157023300018007Freshwater SedimentFTDSLADGLANLPPGLNFPPPAQGNIPAAFRGNNKRRDKQK
Ga0187855_1023366323300018038PeatlandLADGLANLPPGLNFPSPSQGNVPAAFRGGKRRDKKLVTPG
Ga0187887_1018494633300018043PeatlandFGESLADGLANLPPGLNFPSPAQDNVPAAFRANPNAKRRKKK
Ga0187851_1018631213300018046PeatlandGGLPEGFPESLADGLANLPPGLNFPGGAQSNIPAAFRGGNKRKKK
Ga0187772_1036304333300018085Tropical PeatlandGLGGLPEGFPDNIADGLAGLQPGLNFPPPGQGNIPAAFRGGSNKRRDKK
Ga0187769_1013716933300018086Tropical PeatlandSAPAGLGGTSGLPGGLDGLGGLPEGFADQLANLPAGLNFPPPSQGNVPAAFRGGGAKRRDKKK
Ga0210404_1079321113300021088SoilFPESLAEGLANMPPGLNFPPPSQGNIPAAFRGGNKRKKK
Ga0213881_1001059913300021374Exposed RockGLGGLGGNLPEGFPDRLADELANLPPGLNFPAAPQGNVPAAFRGNGKRRNKKK
Ga0210397_1017288513300021403SoilGFPEGFPESLADGLANLPPGLNFPSPAQDNIPAAFRGGNNKRRDKKK
Ga0210389_1148014623300021404SoilLGLPEGFPESLADGLANLPPGLNFPSPAQDNIPAAFRGGNNKRRDKKK
Ga0210384_1189554523300021432SoilALGGPGGLGGLPGGLPEGFPESLADGLANLPPGLNFPSASSAQGNIPAAFRGGNKRKKK
Ga0213878_1015099823300021444Bulk SoilLPEGFPESLADSLANLPPGLNFPSPSQGDIPAAFRGGKPKRRDKK
Ga0210390_1143917123300021474SoilAGAGGLPGGGLPAGLPEGFPESLAEGLANMPPGLNFPPPSQGNIPAAFRGGNKRKKK
Ga0187846_1000322493300021476BiofilmADGLAGLQPGGLQFPSPKQTNVPAAFRGNPKRRDKNK
Ga0212123_1028485613300022557Iron-Sulfur Acid SpringADGLANLPSGLNFPPPQQGNVPAAFRGNKRRDKKK
Ga0257176_106563323300026361SoilLADGLANLPPGLNFPSPAQNNIPAAFRGGNNKRRDKKK
Ga0207839_102399623300027010Tropical Forest SoilLGGLPEGLADQLANLPSGLNFPSPSQGNVPAAFRGGNAKRRDKKK
Ga0208730_101380413300027047Forest SoilPAGVGGLGTGLGGLPEGFPESLADGLANLPPGLNFPSPAQDNIPAAFRGGNNKRRDKKK
Ga0208365_102336123300027070Forest SoilAGLPGGGLPEGFPENLAEGLANLPPGLNFPPPAQGNIPAAFRGGNKRKKK
Ga0208860_100911323300027076Forest SoilFSDQLADGLANLPSGLNFPPPSQGNVPAAFRGGNPKRRDKKK
Ga0208097_100762713300027173Forest SoilGGLPAGGLPEGFPESLADGLANLPPGLNFPPPSQGNIPAAFRGGNKRKKK
Ga0207777_109527423300027330Tropical Forest SoilGGPGCLGPGGLDGLGGLPEGLADQLANLPSGLNFPSPSQGNVPAAFRGGNAKRRDKKK
Ga0208043_108605213300027570Peatlands SoilEGLANLPPGLNFPPPQQPGNIPAAFRGGNNKRRDKKK
Ga0208043_111639613300027570Peatlands SoilGGLGGLGGLPGGLPEGFPENLAEGLANLPPGLNFPPPSQGNIPAAFRGGNKRKKK
Ga0208565_109639823300027662Peatlands SoilESLADGLANLPPGLNFPPPAQGNIPAAFRGGNKRKKK
Ga0207826_122091123300027680Tropical Forest SoilGLDGLGGLPEGLADQLANLPSGLNFPSPSQGNVPAAFRGGNAKRRDKKK
Ga0207862_106172613300027703Tropical Forest SoilGGGPQNPPSGLGGLGGLPEGFPENIADGLANLQPGLNFPPPGQGNIPAAFRGGNNKRRDK
Ga0209773_1023172613300027829Bog Forest SoilGAGGLGGLPEGFTDSLAEGLSNLPVGLNFPPPAQGNIPAAFRGGNKRRDKKK
Ga0209517_1020924223300027854Peatlands SoilPGGLPEGFPENLAEGLANLPPGLNFPPPSQGNIPAAFRGGNKRKKK
Ga0209166_1052360533300027857Surface SoilPEGFPESLADGLANLPPGLNFPPPSQGNIPAAFRGGDKRRDNKKK
Ga0209380_1060603123300027889SoilGGLGTGLGGLPEGFPESIADGLANLPSGLNFPVPAQDNIPAAFRGNNKRRDKKK
Ga0209624_1109866523300027895Forest SoilGGLPEGFADSLTEGLAGLQPGLNFPPTAPGNIPAAFRGDPKRRKKK
Ga0302225_1018635823300028780PalsaAAPAVPGLGAAGLGNRDGLPGGLPEGFPESLAEGLANLPPGLNFPSPSQGNVPAAFRGGKRRDKRK
Ga0302228_1040157613300028808PalsaGLPGGLPEGFPESLADGLANLPPGLNFPSPPQGNVPAAFRGGKRRDKRK
Ga0311340_1004832463300029943PalsaGAGGLGGLAGLPDGFPESLADGLANLPPGLNFPPPAQGNIPAAFRANPKRRDKNDKNK
Ga0311371_1011603613300029951PalsaLGALGGLPDGFPDNLAEGLANLPPGLSFPPPQPGNNNIPAAFRGGGKRKKK
Ga0311339_1105302613300029999PalsaLGALGALPGGLPDGFPDNLAEGLANLPPGLSFPPPQPGNNNIPAAFRGGGKRKKK
Ga0302178_1012252633300030013PalsaLPDGFPESLADGLANLPPGLNFPPPAQGNIPAAFRANPKRRDKNDKNK
Ga0302181_1001433553300030056PalsaVPGLGAGGLGIRDGLPGGLPEGFPESLADGLANLPPGLNFPSPPQGNVPAAFRGGKRRDKRK
Ga0302181_1013258523300030056PalsaGFPESLADGLANLPPGLNFPSPSQGNVPAAFRGGKRRDKRK
Ga0310037_1031386313300030494Peatlands SoilPESLADGLANLPPGLNFPPPAQGNIPAAFRGGNKRKKK
Ga0302183_1015149713300030509PalsaGALGALPGGLPDGFPDNLAEGLANLPPGLSFPPPQPGNNNIPAAFRGGGKRKKK
Ga0210274_127508613300030531SoilFGESIADGLANLPPGLNFPSPAQGNIPAAFRGGNNKRRDKKK
Ga0311355_1187772923300030580PalsaGGLPDGFPDNLAEGLANLPPGLSFPPPQPGNNNIPAAFRGGGKRKKK
Ga0311354_1010644013300030618PalsaGLGAGGLGGLGGLPEGFPESLADGLANLPPGLNFPPPAQGNIPAAFRGNPKRRDKNDKNK
Ga0302314_1050878443300030906PalsaLGALPGGLPDGFPDNLAEGLANLPPGLSFPPPQPGNNNIPAAFRGGGKRKKK
Ga0318516_1020001913300031543SoilLGPAGLGGLPEGFADQLANLPSGLNFPPPSQGNVPAAFRGGNAKRRDKKK
Ga0318534_1056634823300031544SoilPEGLSDQLANLPSGLNFPPPSQGNVPAAFRGGNAKRRDKKK
Ga0318528_1066167913300031561SoilGGLPEGFADQLANLPSGLNFPPPSQGNVPAAFRGGNAKRRDKKK
Ga0318573_1079911213300031564SoilPEGFPDSLAEGLANLNFPPPSQGNIPAAFRGGDNKRRDKKK
Ga0318574_1037846423300031680SoilGLGGLPEGLSDQLANLPSGLNFPPPSQGNVPAAFRGGNAKRRDKKK
Ga0310686_10411429623300031708SoilDGLANLPSGLNFPPPPQGNVPAAFRGNPKRRDKKK
Ga0318496_1008997413300031713SoilPAGLGGLPEGFADQLANLPSGLNFPPPSQGNVPAAFRGGNAKRRDKKK
Ga0318496_1024706313300031713SoilVWGPPWPGGLGEASGLGGLGGLPEGFPEELAEGLANLPSGLNFPPSSQGNIPAAFRGGTNKRRDQKK
Ga0318493_1009270013300031723SoilLGPGGLGGLPEGLSDQLANLPSGLNFPPPSQGNVPAAFRGGNAKRRDKKK
Ga0318493_1016164013300031723SoilAIPAELGGAGGLGPAGLGGLPEGFADQLANLPSGLNFPPPSQGNVPAAFRGGNAKRRDKK
Ga0318493_1073694423300031723SoilVPGGLPEGFPESLADELANLPPGLNFPPQPQGNIPAAFRGGGKGRKKK
Ga0318501_1032245713300031736SoilPGGLGGLPEGLSDQLANLPSGLNFPPPSQGNVPAAFRGGNAKRRDKKK
Ga0318502_1021375813300031747SoilFPDSLAEGLANLNFPPPSQGNIPAAFRGGDNKRRDKKK
Ga0318535_1014616533300031764SoilAGLGGLPEGFADQLANLPSGLNFPPPSQGNVPAAFRGGNAKRRDKKK
Ga0318554_1082408823300031765SoilLGSGGLGGLPEGFPESLADGLANLPSGLNFPPPSQGNIPAAFRGGTNKRRDKKK
Ga0318546_1035364313300031771SoilLGPAGLGGLPEGLSDQLANLPSGLNFPPPSQGNVPAAFRGGNAKRRDKKK
Ga0318552_1005107813300031782SoilGGLPEGFPESIADGLANLPSGLNFPPPSQGDIPAAFRGGTGKRRDKKK
Ga0318552_1009066233300031782SoilGGAGGLGPAGLGGLPEGFADQLANLPSGLNFPPPSQGNVPAAFRGGNAKRRDKKK
Ga0318550_1039211323300031797SoilGLPEGFADQLANLPSGLNFPPPSQGNVPAAFRGGNAKRRDKKK
Ga0318567_1001999313300031821SoilELAEGLANLPSGLNFPPSSQGNIPAAFRGGTNKRRDQKK
Ga0318567_1056551513300031821SoilEGFADQLANLPSGLNFPPPSQGNVPAAFRGGNAKRRDKKK
Ga0318511_1002015623300031845SoilASGLGGLGGLPEGFPEELAEGLANLPSGLNFPPSSQGNIPAAFRGGTNKRRDQKK
Ga0318527_1011340723300031859SoilEELAEGLANLPSGLNFPPPSQGNIPAAFRGGTNKGRDKKK
Ga0306925_1069271323300031890SoilSGLGGLGGLPEGFPEELAEGLANLPSGLNFPPPSQGNIPAAFRGGTNKGRDKKK
Ga0306925_1181087623300031890SoilGLGGLGGLPEGFPEELAEGLANLPSGLNFPPPSQSNVPAAFRGGTNKGRDKKK
Ga0318522_1030622513300031894SoilFPDSLAEGLANLNFPPSSQGNIPAAFRGGDNKRRDKKK
Ga0318520_1102933323300031897SoilELAEGLANLPSGLNFPPPSQGNIPAAFRGGTNKGRDKKK
Ga0306923_1148371223300031910SoilGLGSLPEGFPDSLAEGLANLNFPPPSQGNIPAAFRGGDNKRRDKKK
Ga0306923_1250145513300031910SoilGQRSGGVGGLGGVPGGLPEGFPENLADELANLPPGLNFPPQPQGNIPAAFRGGGKGRKKK
Ga0310912_1073622513300031941SoilGPGGLGGLPEGLSDQLANLPSGLNFPPPSQGNVPAAFRGGNAKRRDKKK
Ga0318562_1020721523300032008SoilGFGGLPEGFPENIADGLANLPSGLNFPPPSQGNIPAAFRGGTSKRRDKKK
Ga0318549_1010579413300032041SoilIPAELGGAGGLGPAGLGGLPEGFADQLANLPSGLNFPPPSQGNVPAAFRGGNAKRRDKKK
Ga0318556_1006984613300032043SoilAGGLGPGGLGGLPEGLSDQLANLPSGLNFPPPSQGNVPAAFRGGNAKRRDKKK
Ga0318504_1017359813300032063SoilEASGLGGLGGLPEGFPEELAEGLANLPSGLNFPPSSQGNIPAAFRGGTNKRRDQKK
Ga0318510_1006127813300032064SoilDQLANLPSGLNFPPPSQGNVPAAFRGGNAKRRDKKK
Ga0318510_1035446613300032064SoilLPGGPGDLSGLGGLPEGFADQLANLPSGLSFPAPSQGNVPAAFRGGNPKRRDKKK
Ga0318553_1018571333300032068SoilGFADQLANLPSGLNFPPPSQGNVPAAFRGGNAKRRDKKK
Ga0311301_1025083853300032160Peatlands SoilPEGFPESLADGLANLPPGLNFPPPAQGNIPAAFRGGNKRKKK
Ga0311301_1045741033300032160Peatlands SoilGGLGGLPGGGLPEGSPENLAEGLANLPPGLNFPPPSQGNIPAAFRGGNKRKKK
Ga0306920_10384851423300032261SoilGFPESLADGLANLPSGLNFPPPSQGNIPAAFRGGKPKRRDKKN
Ga0335072_1024158243300032898SoilLQESLTEGLANLNFPPPAQGNIPAAFRGGRNKRRDDKKD
Ga0318519_1005727223300033290SoilAAGLGEASGLGGLGGLPEGFPEELAEGLANLPSGLNFPPSSQGNIPAAFRGGTNKRRDQK


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