NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F062526

Metagenome / Metatranscriptome Family F062526

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F062526
Family Type Metagenome / Metatranscriptome
Number of Sequences 130
Average Sequence Length 77 residues
Representative Sequence LKRLAGCIDRGLEVSRDVLEHVGLYAQDLQAVDDTLRPSATATGNEREARFISLQQAWQSSTDPVHQHFAKMMSS
Number of Associated Samples 115
Number of Associated Scaffolds 130

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 94.62 %
% of genes near scaffold ends (potentially truncated) 95.38 %
% of genes from short scaffolds (< 2000 bps) 97.69 %
Associated GOLD sequencing projects 107
AlphaFold2 3D model prediction Yes
3D model pTM-score0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (97.692 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(21.538 % of family members)
Environment Ontology (ENVO) Unclassified
(25.385 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(37.692 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 61.17%    β-sheet: 0.00%    Coil/Unstructured: 38.83%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.63
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 130 Family Scaffolds
PF10551MULE 4.62
PF12759HTH_Tnp_IS1 0.77
PF01526DDE_Tnp_Tn3 0.77
PF13358DDE_3 0.77
PF00563EAL 0.77
PF07592DDE_Tnp_ISAZ013 0.77

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 130 Family Scaffolds
COG2200EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)Signal transduction mechanisms [T] 0.77
COG3434c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domainsSignal transduction mechanisms [T] 0.77
COG4644Transposase and inactivated derivatives, TnpA familyMobilome: prophages, transposons [X] 0.77
COG4943Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domainsSignal transduction mechanisms [T] 0.77
COG5001Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domainSignal transduction mechanisms [T] 0.77

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.69 %
UnclassifiedrootN/A2.31 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002560|JGI25383J37093_10170902All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300002562|JGI25382J37095_10249195All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300004268|Ga0066398_10068841All Organisms → cellular organisms → Bacteria760Open in IMG/M
3300004268|Ga0066398_10099337All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300005174|Ga0066680_10238051All Organisms → cellular organisms → Bacteria1155Open in IMG/M
3300005174|Ga0066680_10656561All Organisms → cellular organisms → Bacteria650Open in IMG/M
3300005332|Ga0066388_100846808All Organisms → cellular organisms → Bacteria1500Open in IMG/M
3300005332|Ga0066388_100889502All Organisms → cellular organisms → Bacteria1470Open in IMG/M
3300005332|Ga0066388_102542790All Organisms → cellular organisms → Bacteria931Open in IMG/M
3300005332|Ga0066388_102566294All Organisms → cellular organisms → Bacteria927Open in IMG/M
3300005334|Ga0068869_101210441All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis664Open in IMG/M
3300005343|Ga0070687_101127596All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300005347|Ga0070668_101998456All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300005434|Ga0070709_10254201All Organisms → cellular organisms → Bacteria1267Open in IMG/M
3300005546|Ga0070696_100201542All Organisms → cellular organisms → Bacteria1486Open in IMG/M
3300005552|Ga0066701_10978445All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300005575|Ga0066702_10719165All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300005586|Ga0066691_10770266All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300005598|Ga0066706_10841266All Organisms → cellular organisms → Bacteria720Open in IMG/M
3300005983|Ga0081540_1078622All Organisms → cellular organisms → Bacteria1494Open in IMG/M
3300006032|Ga0066696_10584426All Organisms → cellular organisms → Bacteria727Open in IMG/M
3300006846|Ga0075430_100382204All Organisms → cellular organisms → Bacteria1162Open in IMG/M
3300006846|Ga0075430_100545222All Organisms → cellular organisms → Bacteria956Open in IMG/M
3300006852|Ga0075433_10146355All Organisms → cellular organisms → Bacteria2100Open in IMG/M
3300006853|Ga0075420_100461969All Organisms → cellular organisms → Bacteria1096Open in IMG/M
3300006853|Ga0075420_100979301All Organisms → cellular organisms → Bacteria727Open in IMG/M
3300007255|Ga0099791_10140790All Organisms → cellular organisms → Bacteria1124Open in IMG/M
3300007258|Ga0099793_10065164All Organisms → cellular organisms → Bacteria1636Open in IMG/M
3300009012|Ga0066710_101343548All Organisms → cellular organisms → Bacteria1109Open in IMG/M
3300009012|Ga0066710_101925784All Organisms → cellular organisms → Bacteria883Open in IMG/M
3300009038|Ga0099829_10853790All Organisms → cellular organisms → Bacteria756Open in IMG/M
3300009038|Ga0099829_10877124All Organisms → cellular organisms → Bacteria745Open in IMG/M
3300009089|Ga0099828_10247368All Organisms → cellular organisms → Bacteria1598Open in IMG/M
3300009090|Ga0099827_10074970All Organisms → cellular organisms → Bacteria2624Open in IMG/M
3300009100|Ga0075418_10793320All Organisms → cellular organisms → Bacteria1022Open in IMG/M
3300009147|Ga0114129_13059515All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300009553|Ga0105249_10441751All Organisms → cellular organisms → Bacteria1338Open in IMG/M
3300009792|Ga0126374_10899329All Organisms → cellular organisms → Bacteria686Open in IMG/M
3300009797|Ga0105080_1017086All Organisms → cellular organisms → Bacteria723Open in IMG/M
3300009804|Ga0105063_1012094All Organisms → cellular organisms → Bacteria932Open in IMG/M
3300009813|Ga0105057_1003984All Organisms → cellular organisms → Bacteria1867Open in IMG/M
3300009836|Ga0105068_1046229All Organisms → cellular organisms → Bacteria782Open in IMG/M
3300010046|Ga0126384_11413456Not Available649Open in IMG/M
3300010047|Ga0126382_11611270All Organisms → cellular organisms → Bacteria602Open in IMG/M
3300010303|Ga0134082_10560088All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300010359|Ga0126376_10853183All Organisms → cellular organisms → Bacteria895Open in IMG/M
3300010362|Ga0126377_12781088Not Available564Open in IMG/M
3300010362|Ga0126377_12860861All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300010398|Ga0126383_11273954All Organisms → cellular organisms → Bacteria825Open in IMG/M
3300010399|Ga0134127_11518585All Organisms → cellular organisms → Bacteria743Open in IMG/M
3300011269|Ga0137392_10487175All Organisms → cellular organisms → Bacteria1024Open in IMG/M
3300011271|Ga0137393_10373621All Organisms → cellular organisms → Bacteria1219Open in IMG/M
3300012096|Ga0137389_10659608All Organisms → cellular organisms → Bacteria899Open in IMG/M
3300012189|Ga0137388_10321531All Organisms → cellular organisms → Bacteria1422Open in IMG/M
3300012189|Ga0137388_10641912All Organisms → cellular organisms → Bacteria987Open in IMG/M
3300012207|Ga0137381_10485335All Organisms → cellular organisms → Bacteria1078Open in IMG/M
3300012211|Ga0137377_10851127All Organisms → cellular organisms → Bacteria844Open in IMG/M
3300012349|Ga0137387_10911623All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium635Open in IMG/M
3300012350|Ga0137372_10984423All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300012356|Ga0137371_10106630All Organisms → cellular organisms → Bacteria2183Open in IMG/M
3300012362|Ga0137361_11363092All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300012363|Ga0137390_11595357All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300012390|Ga0134054_1007675All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300012497|Ga0157319_1008645All Organisms → cellular organisms → Bacteria784Open in IMG/M
3300012925|Ga0137419_10842419All Organisms → cellular organisms → Bacteria752Open in IMG/M
3300012925|Ga0137419_11227626All Organisms → cellular organisms → Bacteria628Open in IMG/M
3300012948|Ga0126375_10678367All Organisms → cellular organisms → Bacteria799Open in IMG/M
3300012975|Ga0134110_10426674All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300012989|Ga0164305_11609039All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300013297|Ga0157378_10245263All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP1871713Open in IMG/M
3300013306|Ga0163162_10610280All Organisms → cellular organisms → Bacteria1217Open in IMG/M
3300015245|Ga0137409_10335517All Organisms → cellular organisms → Bacteria1321Open in IMG/M
3300016445|Ga0182038_10522255All Organisms → cellular organisms → Bacteria1016Open in IMG/M
3300017792|Ga0163161_11199405All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300018027|Ga0184605_10425641All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300018058|Ga0187766_11117451Not Available567Open in IMG/M
3300018075|Ga0184632_10139182All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP1871070Open in IMG/M
3300018076|Ga0184609_10529181All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300019377|Ga0190264_11269544All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300019869|Ga0193705_1081522All Organisms → cellular organisms → Bacteria623Open in IMG/M
3300021073|Ga0210378_10080206All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP1871278Open in IMG/M
3300021073|Ga0210378_10318135All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300021086|Ga0179596_10045599All Organisms → cellular organisms → Bacteria1790Open in IMG/M
3300021560|Ga0126371_12229945All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300022195|Ga0222625_1000783All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300025906|Ga0207699_10117437All Organisms → cellular organisms → Bacteria1715Open in IMG/M
3300025942|Ga0207689_11070102All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis680Open in IMG/M
3300026297|Ga0209237_1078110All Organisms → cellular organisms → Bacteria1527Open in IMG/M
3300026332|Ga0209803_1189223All Organisms → cellular organisms → Bacteria770Open in IMG/M
3300026548|Ga0209161_10381388All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300026550|Ga0209474_10626575All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300026552|Ga0209577_10418922All Organisms → cellular organisms → Bacteria954Open in IMG/M
3300027163|Ga0209878_1037767All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300027561|Ga0209887_1124899All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300027643|Ga0209076_1029809All Organisms → cellular organisms → Bacteria1514Open in IMG/M
3300027671|Ga0209588_1114369All Organisms → cellular organisms → Bacteria866Open in IMG/M
3300027766|Ga0209796_10119884All Organisms → cellular organisms → Bacteria816Open in IMG/M
3300027846|Ga0209180_10432681All Organisms → cellular organisms → Bacteria743Open in IMG/M
3300027875|Ga0209283_10209236All Organisms → cellular organisms → Bacteria1295Open in IMG/M
3300027875|Ga0209283_10626676All Organisms → cellular organisms → Bacteria679Open in IMG/M
3300027882|Ga0209590_10686667All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300027915|Ga0209069_10239992All Organisms → cellular organisms → Bacteria939Open in IMG/M
3300028592|Ga0247822_10210664All Organisms → cellular organisms → Bacteria1455Open in IMG/M
3300028716|Ga0307311_10032174All Organisms → cellular organisms → Bacteria1353Open in IMG/M
3300028717|Ga0307298_10123208All Organisms → cellular organisms → Bacteria744Open in IMG/M
3300028719|Ga0307301_10046752All Organisms → cellular organisms → Bacteria1326Open in IMG/M
3300028792|Ga0307504_10207520All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300028880|Ga0307300_10136207All Organisms → cellular organisms → Bacteria764Open in IMG/M
3300028884|Ga0307308_10413480All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300030830|Ga0308205_1014637All Organisms → cellular organisms → Bacteria843Open in IMG/M
3300030903|Ga0308206_1007205All Organisms → cellular organisms → Bacteria1549Open in IMG/M
3300030904|Ga0308198_1006253All Organisms → cellular organisms → Bacteria1318Open in IMG/M
3300030988|Ga0308183_1042247All Organisms → cellular organisms → Bacteria885Open in IMG/M
3300030989|Ga0308196_1002645All Organisms → cellular organisms → Bacteria1491Open in IMG/M
3300031094|Ga0308199_1013247All Organisms → cellular organisms → Bacteria1291Open in IMG/M
3300031096|Ga0308193_1015278All Organisms → cellular organisms → Bacteria935Open in IMG/M
3300031561|Ga0318528_10467484All Organisms → cellular organisms → Bacteria677Open in IMG/M
3300031681|Ga0318572_10085804All Organisms → cellular organisms → Bacteria1755Open in IMG/M
3300031720|Ga0307469_10190931All Organisms → cellular organisms → Bacteria1588Open in IMG/M
3300031820|Ga0307473_10667412All Organisms → cellular organisms → Bacteria726Open in IMG/M
3300031820|Ga0307473_11542482All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300031831|Ga0318564_10187161All Organisms → cellular organisms → Bacteria922Open in IMG/M
3300031908|Ga0310900_10913954All Organisms → cellular organisms → Bacteria717Open in IMG/M
3300032025|Ga0318507_10531647All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300032066|Ga0318514_10125885All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP1871316Open in IMG/M
3300032174|Ga0307470_10843987All Organisms → cellular organisms → Bacteria714Open in IMG/M
3300033551|Ga0247830_10171204All Organisms → cellular organisms → Bacteria1602Open in IMG/M
3300033813|Ga0364928_0015327All Organisms → cellular organisms → Bacteria1482Open in IMG/M
3300034660|Ga0314781_068271All Organisms → cellular organisms → Bacteria668Open in IMG/M
3300034665|Ga0314787_035547All Organisms → cellular organisms → Bacteria774Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil21.54%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil12.31%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil8.46%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil6.92%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.38%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil4.62%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand4.62%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.85%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.08%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment2.31%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.31%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.31%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.31%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.54%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.54%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.77%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.77%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.77%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.77%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.77%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.77%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.77%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.77%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.77%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.77%
AgaveHost-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave0.77%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cmEnvironmentalOpen in IMG/M
3300002562Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300004268Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBioEnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005983Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1Host-AssociatedOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300009797Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_10_20EnvironmentalOpen in IMG/M
3300009804Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40EnvironmentalOpen in IMG/M
3300009813Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20EnvironmentalOpen in IMG/M
3300009836Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012390Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012497Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510Host-AssociatedOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300019869Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022195Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026297Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300027163Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50 (SPAdes)EnvironmentalOpen in IMG/M
3300027561Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)EnvironmentalOpen in IMG/M
3300027643Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)EnvironmentalOpen in IMG/M
3300027671Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027766Agave microbial communities from Guanajuato, Mexico - Or.Sf.rz (SPAdes)Host-AssociatedOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027915Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028716Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198EnvironmentalOpen in IMG/M
3300028717Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158EnvironmentalOpen in IMG/M
3300028719Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182EnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300028880Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300030830Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030903Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030904Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030988Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030989Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_197 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031094Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031096Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031561Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26EnvironmentalOpen in IMG/M
3300031681Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031831Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300032025Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20EnvironmentalOpen in IMG/M
3300032066Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M
3300033813Sediment microbial communities from East River floodplain, Colorado, United States - 30_j17EnvironmentalOpen in IMG/M
3300034660Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034665Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25383J37093_1017090213300002560Grasslands SoilLNRLAGCIDRGLDVSHDAFEHVGRYAQDLQAVDATLRPSDAVTGQDREAPFISLQESWQASTDPIHQHFAKMMSSFEPG
JGI25382J37095_1024919523300002562Grasslands SoilMDRGLAVAHDALDQVGLYAQDLQAVDATLRPSDAVTAEERQAQFLSLQETWQASTDPI
Ga0066398_1006884113300004268Tropical Forest SoilLNRLAGCIDRGLDVSRDALEQVGRYAQDLQAVDATLRSSEAVTAEERRAQFRSLQEAWQSSLDPVHQHFTKTMSSFEPGVFVGGEATDF
Ga0066398_1009933723300004268Tropical Forest SoilLKRLAGCIDRGLDVARDALAHVGLYAQALQAVDSTLRPSATATSVEREAQFSALQQEWQSSAEPVEQHFAKMMSGFALGLFVGGETAEFPADNVDLE
Ga0066680_1023805123300005174SoilLNRLAGCMDRGLDGSRDALEHVGQYAQALQAVDATLRPSAGVTTEERREQFLAWQEAWQSSLDPVPQHFAKIMSSFEPGVFVG
Ga0066680_1065656113300005174SoilLKRLAGCIDRGLAVSRDALAQVGLYAQDLQAVDGILGPSATATRAERAARFISLQQAWESSADPVEQHFAKMMSGFEPG
Ga0066388_10084680823300005332Tropical Forest SoilLNRLAGCINRGLEASRDALEHVGRYAQDLQAVDATLRLSDAVTAEERRAQFLSLQEAWQSSMDPVHQHFAK
Ga0066388_10088950223300005332Tropical Forest SoilLKRLAGCIDRGLAVSRDALAQVGLYAQDLQAVDGILGPSATATRAEREARFISLQQEWESSADPV
Ga0066388_10254279023300005332Tropical Forest SoilLLLKRLAGCIDRGLAVSHDALEQVGLYARDLQAVDGLLRPSDAATGEEREARFISLQQA*
Ga0066388_10256629423300005332Tropical Forest SoilLNRLAGCIDRGLDASRDALEHVGRYAQDLQAVDATLRLSDAVTAEERRAQFLSLQEAWQSSMDPVHQHFAK
Ga0068869_10121044113300005334Miscanthus RhizosphereLKRLAGCMDRGLDVSRATLEHVSLYAQDLQAVDDTMRPSATATGDEREARFSSRHQAWQSSTDPVHQHCAMTMISFAPGLFVGGEAVDV
Ga0070687_10112759613300005343Switchgrass RhizosphereLNRLAGCIDRGLDVSRDALEQVGRYAQDLQAVHATLGPSDAVPAEERREQFLSLQEAWQSSLDPVHQHFAKIMISFEPGVFVGSEA
Ga0070668_10199845613300005347Switchgrass RhizosphereLNRLAGCIDRGLDVSRDALEQVGRYAQDLQAVDATLRSSEAVTAEERRAQFLALQEAWQSSMDPVHQHCAKTMSSFE
Ga0070709_1025420133300005434Corn, Switchgrass And Miscanthus RhizosphereLKRRAGCIDRGLDVSRDVLEHVGLYAQDLQAVDDTLRPSATAAGDEREARFISLQQAWQSSPDPVHQHFAKMMSSFEP
Ga0070696_10020154213300005546Corn, Switchgrass And Miscanthus RhizosphereLNRLAGCIDRGRDVSRDALEQVGRYAQDLQAVDATLRPSDAVTAEERKAQFLSLQEAWQSSTDAIHQHF
Ga0066701_1097844513300005552SoilMDRGLDVSRDTVEQVRLSAQDLQAVDDTRRPSATATGDEREARCSSLQQAWQSSTAPVHQPFAMRMSSVEPGWFGGGEAADFPADHVDVERWFQGP
Ga0066702_1071916513300005575SoilLKRLAGCIDRGLTVARDALEHVGLYAQNLQAVDGILRPSDEASGEEREARFILLQQAWQSSTDPVEQHFAKMMSSFEPG
Ga0066691_1077026613300005586SoilLNRLAGCIDRGLDVSRDALEQVGQYAQARQAVDATLRPSAGVTTEERREQFLAWQEAWQSSLDPVHQHFAKIMSSFEPG
Ga0066706_1084126623300005598SoilLLKRLAGCMDRGLDVARDALAHVGLYAQALQAVESTLRPSATATSVEREAQFSALQQEWQSSADPVEQHFAKMMSGFE
Ga0081540_107862233300005983Tabebuia Heterophylla RhizosphereLNRLAGCIDRGLDVSRDALEHVGRYAQDLQVVDVTLRPSDVVTAEERREQFLSLQEAWQSSLAPVHQHFAKIMSSFEPGVFV
Ga0066696_1058442623300006032SoilLLKRLAGCIDRGLAVSREALAQVGLYAQDLQAVDSILRPSATATRAECEARFIVLQQAWESSADPVEQHFAKMMSGFEPGLF
Ga0075430_10038220413300006846Populus RhizosphereLLLKRLAGCIDRGLAVSHDALEQVGLYARDLQAVDGLLRPSDAATGEEREARFISLQQAWQASTDPVEQHFAKMMSSFEPGLFV
Ga0075430_10054522223300006846Populus RhizosphereLLKRLAGCIDRGLAVSRDVLEHVSLYAPDLQAVDDTLRPSATATVDEREARFISLQQGWQSS
Ga0075433_1014635513300006852Populus RhizosphereLLKRLAGCIDRGLAVSRDVLAQVGLYAQDLQAVDSILRPSATVTRAECESRFIALQQAWESSADPVEQHFAKMMSGFEPG
Ga0075420_10046196923300006853Populus RhizosphereLNRLAGCIDRGLDVSRDALEQVGRYAQDLQAVDATLRSSEAVTAEERRAQFLSLQEAWQSSLDPVHQHFAKTMSSFEPGVFVGGEATD
Ga0075420_10097930113300006853Populus RhizosphereLNRLAGCIDRGLDVSRDALEQVGRYAQDLQAVDATLRPSDTVTAEERQAQFLLLQEAWQASTDPI
Ga0099791_1014079023300007255Vadose Zone SoilLQRLAGCIERGLAVSRDAWAHVGLYAQARQAVEGILRPSATATRAEREARFLALPQEWESSAAPVAPHCATMMSGCEPGWLVGDERAELP
Ga0099793_1006516433300007258Vadose Zone SoilLNRLAGCIDHGLDVARDALEQVGRYAHDLQAVDATLKPSDALTAQERQAQFLSLQEAWQSSTDPVHQHFAKMMS
Ga0066710_10134354813300009012Grasslands SoilLKRLVGCIDRGLAVARDVLEQVGLYAQDLQAVDGLLGPSDAASGEEREARFISLQQ
Ga0066710_10192578413300009012Grasslands SoilLNRLAGGIDRGLDVSHDAFEHVGRYAQDLQAVDATLRPSDAVTGQDREAQFISLQESWQASTDPIHQHCAKMMSSFEPGL
Ga0099829_1085379023300009038Vadose Zone SoilLKRLAGCIDRGLDVARDVLEHVGLYAQDLQAVDDTLRPSATATGEEREARFISLQQEWESSADPVAQHFAKM
Ga0099829_1087712413300009038Vadose Zone SoilLKRLVGCIDRGLAVARDALEQVGLYAQDLQAVDGILRPSDVASGEEREARFIALQQAWQSST
Ga0099828_1024736833300009089Vadose Zone SoilLKRLVGCIDRGLAVARDALEQVGLYAQDLQAVDGILRPSDAASGEEREARFIALQQAWQSSTDAVEQ
Ga0099827_1007497033300009090Vadose Zone SoilLNRLAGCIDRGLDVSHDAFEHVGRYAQDLQAVDATLRPSDAVTGQDREAQFISLQESWQASTDPIHQHFAKMMSSFEPGLFVGG
Ga0075418_1079332013300009100Populus RhizosphereLKRLAGCIDRGLEVSREVLEHVGLYAQDLQAVDDTLRPSATATGDEREARFISLQQAWQSSTDPVHQHFAKMMSSFAPGLFIGGEAADFPADNLDL
Ga0114129_1305951513300009147Populus RhizosphereLNRLAGCIDRGRDVARDTLEQVGRYAHDLQAVDATLRPSDAGTAEERKAPFRSLQEAWQSSLDPVHQHF
Ga0105249_1044175123300009553Switchgrass RhizosphereLLKRLAGCMDRGRAVARDPLAHVGLSAQDLQAVDGILGPSATATRAERAARCISLQQEWESSADPVAQPFAKRMSGFAPGVFGGGRDG*
Ga0126374_1089932913300009792Tropical Forest SoilMDRGLDVSRDALEHVGRYAQDLQAVNATLGPSDAVPAEERREQFLSLQEAWQSSLDPVHQHVAKLMISFEPGVFVGSEAADFPTDNVD*
Ga0105080_101708623300009797Groundwater SandLLQRLAGCMDRGRAVAREALAHVGLYAQALHAVDGTLRPSATATSAEREAQFISRQQEWQSSADPVEQHCAKMMSGFEPGVFVGGE
Ga0105063_101209413300009804Groundwater SandMDRGRAVARDALAHVGLYAQALQAVERTRRPSATATSAEREAQCSALQQAWQSSADPVEQHFAKMMSGFELGLFVG
Ga0105057_100398413300009813Groundwater SandLKRLAGCIDRGLDVARDALAHVGLYAQALQAVDSTLRPSATATSAEREAQFSALQQEWQFSADPVEQHFAK
Ga0105068_104622913300009836Groundwater SandLKRLVGCIDRGLAVARDALEHVGLYAQDLQAVDGILRPSDAASGEAREARCIALQQAWQSSTDAVEQ
Ga0126384_1141345613300010046Tropical Forest SoilLAVSHEALEHVGLDARDLQAVEGLLRPSDAPTGAEREARFISLPQAWQASTDPVEPHCAKIMSSCEPGLVVGGEA
Ga0126382_1161127013300010047Tropical Forest SoilLLKRLAGCIDRGLEVSRDVLEHVGLYAQDLQAVDDTLRPSATATGDEREARFISLQQAWQSSTDPVHQHFAKMLSSFA
Ga0134082_1056008813300010303Grasslands SoilMDRGFDGARDALAHVGLYAQDLQAVDSILGLSATATRAEREARFISLQQEWESSADPVEQHF
Ga0126376_1085318313300010359Tropical Forest SoilVKRLVGCIDRGLAVSRDALAHVGLYTQDLQAVDGLLRPSATATREEREARFIARQQEWESSADPVEQHFAK
Ga0126377_1278108813300010362Tropical Forest SoilLRLKRLAGCLDRGLAVSHEALEHAGLDARDLQAVEGLLRPSDAPTGAEREARFISLPQAWQASTDPVEPHCATIMSRCEPGLVVGGE
Ga0126377_1286086123300010362Tropical Forest SoilLLLKRLAGCIDRGLAVSHDALEHVGLYARDLQAVDGLLRPSDAATGEEREARFISLQQTWQSSTDPVEQHFAKIMSS
Ga0126383_1127395413300010398Tropical Forest SoilLNRLAGCIDRGLDVSRDALEQVGRYAQDLQAVDATLRSSEAVTAEERRAQFRSLQEAWQSSLDPVHQHFTKTMSSFEPGVFVGGEATD
Ga0134127_1151858513300010399Terrestrial SoilLLLKRLAGGIDRGLAVSRDALEHVGLYAQDLQAVDGILRPSEAATGEEREARFISLQQAWQAST
Ga0137392_1048717523300011269Vadose Zone SoilLKRLAGCIDRGLDGARDALAHVGLYAQALQAVDSTLRPSATATSAEREAQFIALQQEWQSSAEPVEQHFAKTMSGFEPGLFVGGETAEFPADNVDLE
Ga0137393_1037362113300011271Vadose Zone SoilLKRLAGCIDRGLDGARDALAHVGLYAQALQAVDSTLRPSATATSAEREAQFSALQQEWQSSADPVEQHFAKMMSGFAPGLFVGGEMAELPVDN*
Ga0137389_1065960813300012096Vadose Zone SoilLKRLAGCIDRGLDGARDALAHVGLYAQALQAVDSTLRPSATATSAERGAQFIALQQEWQSSAEPVEQHFAKTMSGFEPGLFVGGET
Ga0137388_1032153123300012189Vadose Zone SoilLLKRLAGCIDRGLDVARDALAHVGLYAQALQAVDGTLRPSATATSAEREARFIVLQQEWQSSADPVEQRFAKMMSGFEPGLFV
Ga0137388_1064191213300012189Vadose Zone SoilLLKRLAGCIDRGLAVSRDVLAQVGLYAQDLQAVDSLLRPSATATRAECEARFIALQQAWESSVDPVEQHCATRMSGVAPGVG
Ga0137381_1048533513300012207Vadose Zone SoilMDRGLAVSRDALAQVGLYAQDLQAVGGILRPSATATRAEREARFISLQQEWESSADPVEQHFAKMMSGFEPGLFVG
Ga0137377_1085112723300012211Vadose Zone SoilMDRGLAVSRDVLAQVGLYAQDLQAVDSILRPSATATRAECEARFIVLQQAWESSADPVE
Ga0137387_1091162313300012349Vadose Zone SoilLLKRLASCIDRGLAVARDALAQVGLYAQDLQAVGGILRPSATATRAEREARFISLQQEWESSADPVEQHFAKMMSGFEPGLF
Ga0137372_1098442323300012350Vadose Zone SoilLKRLAGCIDRGLEVSRDVLEHVGLYAQDLQAVDDTLRPSATATGDEREARFIAVQQAWQSSPDPVYQHFAKMMSSFAPGLFIGGAAADF
Ga0137371_1010663013300012356Vadose Zone SoilLKRLAGCIDRGLEVSRDVLEHVGLYAQDLQAVDDTLRPSATATGDEREARFISLQQAWQS
Ga0137361_1136309213300012362Vadose Zone SoilLKRLVGCIDRGLAVARDVLEHVGLYARDLQAIDGLLRPSDTASGEEREALFIALQQAWQSSTDAVEQH
Ga0137390_1159535713300012363Vadose Zone SoilMDRGLAVSRDVFVQVGLDAQDLQAVDSLLRPSATATRAECEARFIALQQTWESSVDPVEQHFAKMMSG
Ga0134054_100767523300012390Grasslands SoilVKRLVGCIDRGLAVARDALEHVGLYARDLQAIDGLLRPSDTASGEEREARFISLQQAWQSSTDA*
Ga0157319_100864523300012497Arabidopsis RhizosphereLKRLAGCIDRGLEVSRDALEHVGFYAQDLQAVDDTLRPSATATGDARAARFIALQQAWQSSTDPVHQHFAKLMSSFAPGLFIGGEAADFP
Ga0137419_1084241913300012925Vadose Zone SoilLNRLAGCIDRGLDVSRDALEQVGRYAQDLQAVDTTLKPSDAVTAEERQAQFLSLQEAWQASTDPVHQHFAKMMRS
Ga0137419_1122762623300012925Vadose Zone SoilLKRLVGCIDRGLAVAHDALEQVGLYAQDLQAVDGILRPSDTASGEEREARFISLQQALQLSTH
Ga0126375_1067836723300012948Tropical Forest SoilLKRLAGCIDRGLEVSRDVLEHVGLYAQDLQAVDDTLRPSATATGDEREARFISWQQAWQSSPDPVHQHFAKMMSSFAPAWQSSPDPVHQHFAKMMS
Ga0134110_1042667413300012975Grasslands SoilVKRLVGCIDRGLAVARDALEHVGLYARDLQAIDGLLRPSDTASGEEREARFISLQQAWQSSTDAVEQHFAKMMNSFEPGVFVGGEVADFPADN
Ga0164305_1160903913300012989SoilLLNRLAGCIDRGLDVSRDALEHVGRYAQDLQAVDATLRPSDAVTAEERKAQFRSLQEAWQSSLDPVH
Ga0157378_1024526313300013297Miscanthus RhizosphereLNRLAGCIDRGLDVSRDALEQVGRYAQDLQAVDATLRPRDAVTAEERKAQFLSLQEAWQSST
Ga0163162_1061028013300013306Switchgrass RhizosphereLLLKRLAGGIDRGLAVSRDALEHVGLYAQDLQAVDGILRPSEAATGEEREARFISLQQAWQASTDPIEQHFA
Ga0137409_1033551723300015245Vadose Zone SoilLKRLAGCIDRGLDVARDALAHVGLYAQALQAVDSTLRPSATATSAEREAQFSALQQEWPSSADPVEQHFAKRMSGFELGLFVGGETAEFPADNVDLER
Ga0182038_1052225523300016445SoilLNRLAGCIDRGLDVSRDALEHVGRYAQDLQAVDATLRPSDAVTAEERKAQFLSLQEAWQASTDPIQQHYA
Ga0163161_1119940513300017792Switchgrass RhizosphereVRLKRLAGGMDRGRAVSHAAVEHGGLYARDLQAVEGRLRPSDAAPGEEREVRCIALHQAWQSSTDA
Ga0184605_1042564113300018027Groundwater SedimentLLKRLAGCLDRGLAVVREALAHVSLYAQALHAVDGTLRPSATATSAEREAQFSALQQEWQSSADPVEQHFAKRMSGFALGL
Ga0187766_1111745113300018058Tropical PeatlandLKRLAGCIDRGLTGSRDAVEHVGLSAQDLQAVDDTLRPSVTATGDEREARCISLQQAWQS
Ga0184632_1013918213300018075Groundwater SedimentLLKRLAGCIDRGLDVARDALAHVGLYAQALQAVESTLRPSATATSVEREAQFSALQQE
Ga0184609_1052918123300018076Groundwater SedimentLKRLAGCIDRGLTVARDALEQVGLYAQDLQAVDGILRPSDAASGEEREARFIALQQAWQSSTDPGEQHFAKLMSSFEPGLFVGGEAA
Ga0190264_1126954413300019377SoilLKRLVGCIDRGLAVARDALEQVGLYAQDLQAVDGILRPSDTASGEEREARFISLQQAWQSSTDAVEQHFAKIMSSFEPGLFVGGEAA
Ga0193705_108152223300019869SoilLLKRLAGCIDRGLDVARDALAHVGLYAQALQAVDGTLRPSVTATSAEREAQFSALQQEWQSSADPVEQHFAKMMSGLEPGL
Ga0210378_1008020613300021073Groundwater SedimentLLKRLAGCIDRGLDVARDALAHVGLYAQALQAVESTLRPSATATSAEREAQFSALQQEWQSSADPVEQHFAKMMSGFELGLFVGGETAEFPADNVDLE
Ga0210378_1031813513300021073Groundwater SedimentLKRLAGCIDRGLTVARDALEQVGLYAQDLQAVDGILRPSDAASGEEREARFIALQQAWQSSTDPVEQHFAKMMSSFEPGVFVGGEAADFPADNL
Ga0179596_1004559913300021086Vadose Zone SoilLNRLAGCIDRGLDVSRDALEHVGRYAQDLQAVDTTLKPSDAVTAEERQAQFRSLQETW
Ga0126371_1222994523300021560Tropical Forest SoilLLKRLAGCIDRGLAVSRDALAQVGLYAQDLQAVDGILGPSATATRAEREARFISLQQEWESSADPV
Ga0222625_100078313300022195Groundwater SedimentLKRLAGCIDRGLEVSRDALEHVGLYAQDLQAVDGILRPSDAASGEEREARFISLQQAWQSSTDAVEQHFAKMMSSVEP
Ga0207699_1011743713300025906Corn, Switchgrass And Miscanthus RhizosphereLKRRAGCIDRGLDVSRDVLEHVGLYAQDLQAVDDTLRPSATAAGDEREARFISLQQAWQSSP
Ga0207689_1107010213300025942Miscanthus RhizosphereLKRLAGCMDRGLDVSRATLEHVSLYAQDLQAVDDTMRPSATATGDEREARFSSRHQAWQSSTDPVHQHCAMTMISFAPGLFVGGEAVDVPADHV
Ga0209237_107811023300026297Grasslands SoilLNRLAGCIDRGLDVSHDAFEHVGRYAQDLQAVDATLRPSDAVTGQDREAQFISLQESWQASTDPIHQHFAKMMSSFEPGLFV
Ga0209803_118922313300026332SoilLLNRLAGCIDRGLHVARDALKPVSQYVKDLQSVDDTLRPSDEATRKEREAQFVSLQEAWQSRVDPVYQHFAKMMGSFQPGVFVGGE
Ga0209161_1038138823300026548SoilLLKRLAGCIDRGLAVSREALAQVGLYAQDLQAVDSILGLSATATRAEREARFISLQQEWESSAD
Ga0209474_1062657523300026550SoilLKRLAGCIDRGLTVARDALEHVGLYAQNLQAVDGILRPSDEASGEEREARFILLQQAWQSSTDPVEQHFAKMMSSFEPGMFVGGEAADFPADNLDL
Ga0209577_1041892213300026552SoilLKRLAGCIDRGLTVARDALEHVGLYAQNLQAVDGILRPSDEASGEEREARFILLQQAWQSSTDPVEQHFAKMMS
Ga0209878_103776713300027163Groundwater SandLLQRLAGCMDRGRAVAREALAHVGLYAQALHAVDGTLRPSATATRAEREAQFISRQQAWQSSADPVEQHCAKMMSG
Ga0209887_112489923300027561Groundwater SandLKRLVGCIDRGLAVARDALEHVGLYAQDLQAVDGILRPSDAASGEAREARCIALQQAWQSSTDAVEQHFATMMSSCEPGLFVGGE
Ga0209076_102980933300027643Vadose Zone SoilLNRLAGCIDHGLDVARDALEQVGRYAHDLQAVDATLKPSDALTAQERQAQFLSLQEA
Ga0209588_111436913300027671Vadose Zone SoilLLKRLAGCIDRGLDVARDALAHVGLYAQALQAVDSTLRPSATATSAEREAQFSALQQEWQSSADPVEQHFAKMMSGFELGLFVG
Ga0209796_1011988423300027766AgaveLLKRLAGCIDRGLEVSRDVLEHVGLYAQDLQAVEDTLRPSTTATVDEREARFIFLQQAWQSSTAPVHQHFAKLMSSFEPG
Ga0209180_1043268113300027846Vadose Zone SoilLKRLVGCIDRGLAVARDALEQVGLYAQDLQAVDGILRPSDAASGEEREARFIALQQAWQSSTD
Ga0209283_1020923613300027875Vadose Zone SoilLLKRLAGCIDRGLAVSREAVAQVGLYAQDLQAVDGILGPSATATRAERETRFIALQQEWESSA
Ga0209283_1062667623300027875Vadose Zone SoilLLKRLAGCSDRGRAVARDALAHVGLYAQDLQAVDGILRPSATATRAEREARFIALQQAWESSADPVAQHFATMMSGFEPGVFVGDEMAELPV
Ga0209590_1068666723300027882Vadose Zone SoilLLKRLASCIDRGLAVARDALAQVGLYAQDLQAVDGILRPSATATRAEREARFISLQQEWESSADPVAQHFAKMMSGFEPGLFVGVRW
Ga0209069_1023999213300027915WatershedsLFKRLAGCIDRGLAVSRDVLAQVGLYAQDLQAVDSILRPSATATRAECEARFIALQQAWESSAAPV
Ga0247822_1021066423300028592SoilLLKRLAGCIDRGLAVSRDALAQVGLYAQDLQAVDGILGPSATATRAEREARFISLQQEWESSADPVEQPFAKMMSGFEPGVLV
Ga0307311_1003217423300028716SoilLKRLAGCIDRGLDVARDALAHVGLYAQALQAVDSTLRPSATATSAEREAQFSALQQEWQSSADPV
Ga0307298_1012320823300028717SoilLLKRLAGCIDRGLAVVREALAHVSLYAQALHAVESTLRPSATATSAEREAQFSALQQAWQSSADPVE
Ga0307301_1004675213300028719SoilLKRLAGCIDRGLDVARDALAHVGLYAQALQAVDSTLRPSATATSAEREAQFSALQQAWQSSADPVEQHFAKMMSGFEPGL
Ga0307504_1020752013300028792SoilLKRLAGCSDRGRAVARDALAHVGLYAQDLQAVEGILRPSATATRAEREARCLALQQEWES
Ga0307300_1013620713300028880SoilLNRLAGCIDRGLDVSRDALEQVGLYAQDLQAIDTTLKPSESVTAEERKAQFLLLQEAWQSSTDPVHQHFAKMMSSFEPGLFVGGEAADFPADNL
Ga0307308_1041348013300028884SoilLLKRLAGCIDRGLDVARDALAHVGLYAQALQAVDSTLRPSATATSAEREAQFSALQQEWQSSADPVEQHFAKMMSGFELGLFVGGETAEFPA
Ga0308205_101463713300030830SoilLNRLAGCIDRGLDVSREALEQVGRYAQDLQAVDTTLKPSDAVTAEERKAQFLSLQEAWQSST
Ga0308206_100720513300030903SoilLNRLAGCIDRGLDVSRDALEHVGRYAQDLQAVDTTLKPSDAVTAEERKTQFLSLQEAWQSSTDPIYQHCAKMMRSFEPGLFVGGEAADFP
Ga0308198_100625333300030904SoilLLKRLAGCIDRGLDVARDALAHVGLYAQALQAVDSTLRPSATATSAEREAQFSALQQEWQSSADPVEQHFAKMMSGFELGLFV
Ga0308183_104224723300030988SoilLLLKRLAGCIDRGLAVSRDALEQVGLYAQDLQAVDGILRPSDAATGEEREARFIALQQAW
Ga0308196_100264523300030989SoilLLLKRLAGCIDRGLAVSRDALEHVGLYAQDLQAVDGILRPSDAATGEEREARFIALQQAWQSSTDP
Ga0308199_101324713300031094SoilLKRLAGCIDRGLDVARDALAHVGLYAQALQAVDSTLRPSATATSAEREAQFSALQQEWQSSADPVEQHFAKMMSGFELGLFVGGETAEFP
Ga0308193_101527813300031096SoilLRRLAGCIDRGLDVARDALAHVGLYAQALQAVDSTLRPSATATSAEREAQFSALQQEWQSSADPVEQHFA
Ga0318528_1046748413300031561SoilLNRLAGCIDRGLDVSRDALEQVGRYAQDLPAVDATLRPSDVVTAKERQAQFLSLQEAWQSSLEPVHQHFAKMMSSFEPG
Ga0318572_1008580423300031681SoilLKRLAGCIDRGLDVARDALAHVGLYTQALQAVDSTLRPSATATSAEREAQFSALQQEWQSSADPVEQHFAKMMSGFALGLFVGGETAEFPADN
Ga0307469_1019093113300031720Hardwood Forest SoilLKRLAGCIDRGLDVARDALAHVGLYAQALQAVDSTLRPSATATSAEREAQCIALQQAWQSSADPVEQHFAKMMRGFEPGLFVGGETA
Ga0307473_1066741213300031820Hardwood Forest SoilLLKRLAGCIDRGLDVARDALAHVGLYAQALQAVDSTLRPSATATSAEREAQFNALQQEWQ
Ga0307473_1154248213300031820Hardwood Forest SoilLNRLAGCIDRGLDVSRDALEQVGRYAQDLQAVDITLKPSDAVTAEERKAQFLSLQEAWQASTDPIQQHCAKMMRSFEPGLFVGGETADFPT
Ga0318564_1018716123300031831SoilLKRLAGCIDRGLDVARDALAHVGLYTQALQAVDSTLRPSATATSAEREAQFSALQQEWQSSADPVEQHFAKMMSGFALGLFVGGETAEFPADNVDLE
Ga0310900_1091395413300031908SoilLKRLAGCIDRGLEVSRDVLEHVGLYAQDLQAVDDTLRPSATATGNEREARFISLQQAWQSSTDPVHQHFAKMMSS
Ga0318507_1053164713300032025SoilLLQRLAGCIDRGLDVARDALAHVGLYTQALQAVDSTLRPSATATSAEREAQFSALQQEWQSSADPVEQHFAKMMSGFALGLFVGGETAEFPADN
Ga0318514_1012588513300032066SoilLNRLAGCIDRGLEVSRNALEQVGRYAQDLPAVDATLRPSDVVTAKERQAQFLSLQEAWQSSLEPVHQHFAKMMSSFE
Ga0307470_1084398713300032174Hardwood Forest SoilLKRLAGCIDRGLEVSRDALEHVGFYAQDLQAVDDTLRPSATATGDARAARFIALQQAWQSSTDPVHQHFAN
Ga0247830_1017120443300033551SoilVKRLAGCIDRGLTVARDALEHVGLDAQDLQAVDGILRPSDAASGAEREARFVSLQQAWQSSTDPVKQHCAKMMSSFEPGVFVGG
Ga0364928_0015327_1_2133300033813SedimentMTRLAGCIDRGLDVSRDALEQVGRYAQDLQAVDTTLKPSDAVTAEERQAQFLSLQEAWQSSTDPIHQHFAK
Ga0314781_068271_1_2523300034660SoilLKRLAGCIDRGLEVSRDALEHVGFYAQDLQAVDDTLRPSATATGDARAARFIALQQAWQSSTDPVHQHFANMMSRFEPGLFVGG
Ga0314787_035547_85_3513300034665SoilLKRLAGCIDRGLEVSRDVLEHVGLYAQDLQAVDDTLRPSATATGNEREARFISLQQAWQSSTDPVHQHFAKMMSSFAPGLFSNGPPKS

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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